Life Sciences Commons^™

A Camera Trap Study Of Scavenger Species On The University Of Mississippi Campus, Lise Larsen

Honors Theses

This is a camera trap study to understand what kind of mammalian scavenger community we have on the University of Mississippi campus and where they are most prominent. Three motion-triggered cameras were used to survey ten buildings on campus over ten weeks. A low number of individuals were caught on camera during this study. There were limitations on this study such as a low number of cameras and a short span of time. More research needs to be done to understand the scavenger community on this campus.

Compatibility Between Native Mississippi Ectomycorrhizal Fungi And Native And Exotic Pine Hosts: Testing For Specificity And The Potential For Rapid Evolution, Hailey A. Long

Honors Theses

Pines are highly invasive trees that are commonly used in pine plantations throughout the Southern Hemisphere. However, the survival and subsequent invasion of pines in exotic environments are dependent on the obligate symbiosis between ectomycorrhizal (ECM) fungi and pines. ECM fungi vary in host specificity and compatibility from pine-specialist species in the genus Suillus to broad generalists, such as species within the genera Pisolithus and Scleroderma. In Experiment 1, we sought to understand how the geographic origin of ECM fungi native to the southeastern United States and two pine species (native southeastern United States Pinus taeda and exotic Pinus …

Striped Blenny (Chasmodes Bosquianus) Presence And Behavior Between Sunrise And Sunset At Oyster Landing, South Carolina, Madeline Schuetze

Honors Theses

Lunar and diel cycles of fishes can help to interpret their behaviors during their reproductive season. Temperate estuaries are used by many benthic fishes for shelter and reproduction. This study examined the behavior and presence of striped blennies (Chasmodes bosquianus) during diel and lunar cycles. PVC pipe shelters were placed to mimic oyster shell nests, a natural habitat for blennies, and cameras were placed to monitor these shelters in April, May, and June 2022, during the striped blenny reproductive period. Video footage was reviewed and analyzed for the presence and behavior of both male and female blennies. Male presence …

Variations In Thermoregulation Strategies Of Northern And Southern Populations Of Mischocyttarus Mexicanus, Taylor Guild

Honors Theses

Mischocyttarus mexicanus is a species of eusocial paper wasp that is found across much of the Southeastern coastal region of the United States. Contrasting wintering strategies have been seen in northern versus southern populations. Anecdotally, northern populations overwinter by clustering on top of palmetto fronds, their preferred nesting substrate, in a sort of "taco" shape, while southern populations stand on their nests that hang on the underside of the palmetto frond throughout the year. I tested three hypotheses related to the adaptive value of northern over-frond clustering behavior: 1) Over-frond clustering is thermoregulation related, meaning it would be temperature driven. …

Species Diversity Of Coleoptera Populations In An Urban Garden In Chattanooga, Tennessee, Mallory Anderson

Honors Theses

Insects are an essential part of the function of ecosystems. The majority of entomological faunistic research has been conducted primarily in rural areas due to high diversity, space for bulky traps, and less outside influence from human activities. However, the need for time-series insect biodiversity data, in rural areas and urban areas alike, is paramount in the wake of our current sixth mass extinction event. Previous research has shown that the greater Chattanooga area is comprised of a diverse population of insects in the Coleoptera (beetles) order, and as shown in the University of Tennessee at Chattanooga’s (UTC) Insect Collection. …

Assessing The Utility Of High-Throughput Phenotyping For Ecological Applications, Annabree Corlew

Honors Theses

A phenotype describes the expressed traits of an organism. These traits can provide insight into interactions between an organism and its environment, making them a key focus of ecological research. But the process of phenotyping traits can be tedious to collect for large-scale experiments. High-throughput phenotyping software has the ability to speed up the phenotyping process by allowing multiple traits to be phenotyped at once. However, the utility of this relatively new and continually developing computational tool is still being assessed, especially beyond applications focused on agricultural crops and grasses. I investigated the accuracy and efficiency of the open-access high-throughput …

Effect Of Temperature On The Microbiome Of A Laboratory-Reared Colony Of Haemaphysalis Longicornis Ticks, Brianna L. Mitchell

Honors Theses

Haemaphysalis longicornis ticks are invasive to the United States with potential to transmit several tick-borne pathogens that are native to the United States. Based on existing locations of H. longicornis in its native regions in Asia, as well as its invasive populations that are established in the United States, several geographic range prediction models have been produced to help understand future range expansion and distribution of this invasive tick in North America. Unfortunately, these models do not all agree and there is uncertainty associated with the potential geographic range expansion of H. longicornis ticks in North America. Climate can affect …

Bryophytes Of Goochland County, Virginia, Mikayla Quinn

Honors Theses

Bryophytes are non-vascular land plants that include mosses, liverworts, and hornworts. Although easier to overlook because of their smaller size, bryophytes are a fundamental part of the ecosystem. As such, maintaining record of their biodiversity is important. Yet, records of bryophyte species in Goochland County, VA were low compared to more thoroughly documented counties such as Prince Edward County. This study expands the documentation of bryophyte flora and presents a checklist of bryophyte species found Virginia’s Goochland County from 2020-2023. Fieldwork conducted at public and privately-owned properties throughout the county between January 2020 and March 2023 yielded 702 specimens that …

Analysis Of Wild Rodent Gut Microbiota As A Function Of Exposure To Ticks And Tick-Borne Pathogens, Joshua Pandian

Honors Theses

Due to advances in high-throughput parallel sequencing, researchers have conducted novel studies exploring relationships between microbiome compositions and different aspects of organism health. Some of these studies have shown that the gut microbiome of rodent models has effects on organism health and behavior and that infection with pathogens and the composition of the skin microbiome are linked to changes in gut microbiome composition. While previous studies have shown how vector microbiota impact vector behavior and pathogen transmission, the effect vectors have on reservoir species microbiomes has been a less prominent focus. We were interested in the relationships between tick parasitism, …

Biomechanics Of Mantis Prey Capture, Danielle S. Taylor

Honors Theses

Mantis species have a variety of different morphologies, so do the extreme forms of mantis limbs trade prey catching capability for camouflage? We hypothesize that some extreme forms of mantis limbs that are associated with cryptic species may be associated with a tradeoff of the capability of those limbs. Previous research has developed 2D morphologies of several hundred species of mantises. We are creating a 3D morphology by using micro dissection, micro CT imaging to construct our 3D biomechanical model. We found the attachment points of the ligaments and muscles from a Tenodera forearm and have constructed a 2D biomechanical …

The Effect Of Blue Mussel (Mytilus Edulis) Extinction On Ecosystem Function In The Gulf Of Maine Rocky Intertidal, Sophia K. Montague

Honors Theses

Stressors associated with climate change including thermal stress and ocean acidification inhibit the growth and reproduction of many species, including the ecologically and economically important blue mussel species in the Gulf of Maine (GOM). Established scaling relationships between mussel size, abundance, and water filtration suggests that the decline of mussels will stunt GOM water filtration. This change in the rate of water filtration could have large effects on the abundance of phytoplankton, abundance of invertebrate larvae, abundance of nutrients and organic material, food web stability, and biodiversity. Overall, this thesis explores the effect of blue mussel (Mytilus edulis) …

Analysis Of Ecological Tradeoffs Between Congeneric Shrimp In Coastal Mississippi Waters, Baylor K. Lynch

Honors Theses

Palaemonidae is an ecologically important and abundant family of shrimp that link the benthos to many estuarine food webs. Palaemon pugio and Palaemon vulgaris regularly co-occur along estuarine edge habitats despite previous studies suggesting different preferred sediment types and salinity regimes. The objective was to determine if competition is occurring between the congeners by comparing their relative abundance and assessing isotope niche space along an estuarine gradient. I seasonally sampled various edge habitats at four sites throughout Biloxi Bay, MS, using fyke nets fished over a tidal cycle from November 2020 to November 2021. Collected organisms were identified to the …

Reproductive Timing In Percina Aurora And Other Percina Species In The Pascagoula River Watershed, Malia Davidson

Honors Theses

The Southeastern United States is home to high levels of aquatic biodiversity and was recently named one of the Earth’s biodiversity hotspots. Within this region, growing human populations continue to place pressure on aquatic ecosystems and the resident species. Darters (Percidae: Percina) represent a large proportion of the freshwater fish diversity in the region. However, for some species the fundamentals of age, growth, reproductive timing and effort, and ecology remain poorly understood. That said, understanding the timing, duration, and effort allocated to reproduction is vital to successful management of any species. The pearl darter, Percina aurora, has been …

Comparing The Reproductive Fitness Of Fundulus Hybrids And Their Parental Species (Fundulus Olivaceus And Fundulus Notatus) Within Mississippi Freshwater Contact Zones, Sarah Stovall

Honors Theses

Hybridization of closely related taxonomic groups within the Animal Kingdom has led to complex species interactions that are not well understood. Pre-zygotic or post-zygotic barriers complicate hybridization as a means to diversify; however, diverging hybrids may speciate and expedite evolution of involved taxa. This study pursues understanding of these intricate interactions using topminnow Fundulus notatus, Fundulus olivaceus, and their hybrids from the Fundulus notatus species complex. Persisting hybrids within riverine contact zones were hypothesized to experience barriers of hybrid breakdown from lower fitness in comparison to the pure species. Specimens were collected within four contact zones: Spring River, …

Developing A Novel Place Preference Assay To Compare Drosophila Species Over Time, Martha M. Brinson

Honors Theses

Across phylogeny, integration of external factors, memory, and internal states of the organism dictate organismal behavior and mechanisms. The underlying genetic components can affect these behaviors such as in genomic changes arising from speciation. In this thesis, a new place preference assay was evaluated in the analysis and investigation of two species of Drosophila flies (D. melanogaster and D. simulans) to measure similarities and differences and their attraction to two different food substrates. Sleep and circadian measurements were also recorded during experimentation. The Drosophila Activity Monitor 5M (DAM5M) System and Sleep Circadian Analysis MATLAB Program (SCAMP) analysis were …

Habitat Preference Of F. Notatus And F. Olivaceus From A Reversed Hybrid Zone, Elizabeth Hart Williams

Honors Theses

Understanding the mechanisms driving habitat preference throughout an organism’s life opens doors to the further understanding of the origins of diversity. Two species of minnow, Fundulus notatus and Fundulus olivaceus, are ideal for ecological research on habitat preference. Ordinarily, F. notatus and F. olivaceus display habitat preferences of downstream and upstream, respectively, with minimal coexistence at confluences. However, in some drainages, these preferences are flipped, like those in the Tombigbee River basin. Members of both species were collected from the Tombigbee River, tagged with species and sex specific colored elastomer marks, and placed in either a homogeneous control or …

The Effects Of Dissolved And Suspended Solids On Freshwater Meiofauna, Jessica Cline

Honors Theses

Meiofauna include small-sized animals (< 1mm) distributed in all aquatic ecosystems on Earth, where they play fundamental trophic and ecological roles. The biodiversity of marine meiofauna and its links with anthropogenic activities is routinely investigated, however, freshwater communities are less known. This is particularly true for the Southeastern United States, which is greatly investigated and elected a hotspot of biodiversity for larger species but very little is known about the meiofauna. The purpose of this research is to reveal the biodiversity of meiofauna from the Tennessee River and test for potential correlations with anthropogenic activities. As a proxy for pollution, dissolved and suspended solids were considered in this study. The research hypothesis is that meiofaunal biodiversity would be affected by possible changes of dissolved and suspended solids in the water column. Possible mechanisms causing biodiversity shifts could be ascribed to osmotic stresses of animals to cope with variation in dissolved solids or, more indirectly, because different sunlight penetration caused by suspended solids would affect primary production. To test the hypothesis, water samples were collected from nine stations located along the Tennessee River in Hamilton County. Each station was visited three times, and, during each visit, environmental parameters (including dissolved and suspended solids) were measured. Meiofauna biodiversity (estimated as richness, community composition, and phylogenetic diversity) was revealed using a metagenomic approach. Statistical analyses were applied to test for possible correlations between the biodiversity estimates and the measured environmental parameters. Results show a high biodiversity of meiofauna with more than 200 amplicon-sequence variants distributed across 10 metazoan phyla. Environmental conditions are highly variable among stations and statistical analyses show that while both dissolved solids (TDS) and turbidity (suspended solids, NTU) did not significantly affect meiofauna biodiversity in the collected samples, various other water, and sediment metrics were found to be significant predictors of meiofauna biodiversity. In conclusion, the results of this project not only reveal for the first time the meiofauna biodiversity from the Tennessee River, but also suggest that meiofauna could be used as bioindicators for several anthropogenic activities in freshwater ecosystems.

Investigation Of The Effects Of Resveratrol And Epigallocatechin Gallate On Woodsmoke-Induced Inflammation, Sarenna Naomi Enright

Honors Theses

Until a few years ago, most scientific investigations related to the health effects of air pollution focused on outdoor air pollutants. But in recent years, the concerns over indoor air pollution has increased. People can spend up to 90% of their time in indoor environments, especially their homes, even more so since the beginning of the COVID-19 pandemic. The concentrations of some air pollutants are five times higher than what is found outdoors.

Indoor air pollution exposure remains a significant cause of morbidity and mortality worldwide. Approximately half of the global population is exposed to abnormally high concentrations of household …

Modeling Jadera Haematoloma’S Phenotypic Variation In The Context Of Its Developmental Plasticity, Michael C. Yorsz

Honors Theses

Phenotypic plasticity is the ability of an organism to integrate information from environmental cues to inform the development of its phenotype and remains understudied in biology. Models of plasticity are needed because evolution in the presence of plasticity is poorly understood. Jadera haematoloma, a hemimetabolous true bug, is an excellent animal model of plasticity, exhibiting a non-linear plastic response to juvenile nutrition that biases adult development into groups with differences in flight capability, wing shape, and fecundity. However, there is a lack of literature consensus regarding the range of developmental outcomes in the species. Some publications report the presence …

Testing For Character Displacement Between Two Abundant Stream Fishes, Amber Nations

Honors Theses

Character displacement is a pattern that can be used to explain differences between similar species in sympatric and allopatric situations. Gause’s Principle explains that a niche can only be occupied by one species at a time, so character displacement may be a way for similar species in the same habitat to shift resource use and compensate in order for the species to coexist. The Southeastern United States offers a unique opportunity to study this pattern because the diversity of freshwater fauna is quite high. However, the question of “How did this region become so diverse?” remains unanswered. One way for …

Hybrid Viability: An Analysis Of Drosophila Hybrid Competition And Mating Success Amongst Its Parental Species, Konrad Drzymalski

Honors Theses

The topic of hybrid offspring viability and mating preference between the two parental species of Drosophila athabasca (West Northern) and Drosophila mahican (Eastern A) is a still largely unexplored avenue of study. While the two aforementioned parental Drosophila species exist in distinct geographical regions across North America, they occupy a sympatric zone in the North East. Due to the absence of hybrid offspring in nature and the high levels of sexual isolation between these two parental species, it is necessary to establish if, and how hybrid offspring suffer in nature. By utilizing no choice mating systems involving audio playback of …

Analysis Of Differential Gene Expression Patterns During Spiral Intestine Development In Leucoraja Erinacea, Kelsey Cox

Honors Theses

The vertebrate gut is a specialized structure responsible for the intake and digestion of food, absorption of nutrients, and expulsion of waste products. The organs of the digestive tract have been conserved over time, but modifications to the size and shape of individual structures exist within the different vertebrate lineages. The skate’s spiral intestine has evolved to maximize nutrient absorption within a compact structure to create space in the body cavity for the organs needed for buoyancy. Studying the unique intestinal morphology of Leucoraja erinacea, or the little skate, provides an opportunity to understand the role of differential gene expression …

Ecology Of Estuarine Birds: Differences In Desensitization Of Year-Round And Transient Species, Sarah Thomas

Honors Theses

Huntington Beach State Park in Murrells Inlet, SC, USA is considered a “hotspot” for birds, according to the eBird database (eBird, 2020). The park is also visited by approximately 300,000 people, annually (Hobdy, 2019). The causeway at the park is an area of high human and wildlife activity. Here, the differences in desensitization, or lack thereof, of year-round and transient bird species to the stimuli of vehicles and humans were determined. Multiple surveys of the birds at Huntington Beach State Park were conducted from 22nd September, 2019 to 13th June, 2020. Desensitization was quantified by use of a range finder …

Predator-Prey Interactions Between Escherichia Coli Strains And Caenorhabditis Elegans At Various Temperatures And Resource Levels, Elizabeth Haynes Whitaker

Honors Theses

Predation is an important component of both evolutionary and ecological interactions across nature. The predator-prey relationship can be altered by differential species’ responses to changes in abiotic factors. The purpose of this study was to examine the effect of temperature, resource levels, and their potential interactions using two strains of Escherichia coli prey and a Caenorhabditis elegans predator. It is concluded that an interaction exists between temperature and resource level on this predator-prey relationship however further testing must be done to confirm results due to contamination in the results.

Incorporating Demographic Structure And Variable Interaction Types Into Community Assembly Models, Akhil Reddy Alasandagutti, Nayan Chawla

Honors Theses

Theoretical studies of ecological food webs have allowed ecologists to remove the constraints of specific location and timescales from their study of ecological communities; food webs are generally complex and thus empirical study is difficult. Further, this theoretical approach allows ecologists to compare ecological processes and outcomes across any possible food web structures. However, these simulated communities are only as useful as the model from which they were constructed. Modifying existing considerations in these models, and generating new ones, are the jobs of theoretical ecologists that seek to achieve the shared goal of a majority of simulations: representation of real …

An Experiment To Test For Rapid Evolution In An Introduced Ectomycorrhizal Symbiosis, Valerie Rewa

Honors Theses

The rapid evolution of introduced ectomycorrhizal-plant partnerships is an under- explored topic that may have immense impacts on ecosystems around the world. This experiment sought to identify and quantify this evolution and its impacts on both fungal colonization as well as plant growth. I used a laboratory experiment to analyze these factors in native and exotic genotypes of Suillus cothurnatus and Pinus species. Much of the data was not able to be collected, but that which was did not support the presence of rapid evolution in the mutualistic partnership. Pine species was seen to have a significant effect on plant …

Troglofauna Of Van Buren And White County: A Survey Of Four Caves In The Mideastern Cumberland Plateau, Gavin Page

Honors Theses

The Cumberland Plateau in Tennessee has the highest cave-obligate biodiversity in North America. Cave-obligate species are entirely restricted to subterranean habitat and demonstrate unique troglomorphy. These species are categorized as troglobionts. However, because of their isolated occurrences, theses species are vulnerable to a variety of disturbances. This issue is furthered in the fact that only approximately 7% of the caves in this region have been surveyed. Of these caves that have been surveyed, only a small portion were professional entomological surveys, while almost no cave has ever been extensively repeat sampled. This study involved newly sampling one cave and repeat …

The Effects Of Urbanization On Insect Morphology: A Meta-Analysis, Evann L. Bailey

Honors Theses

Urbanization has been shown to create a rapid change in the environment as you move from rural areas to urban areas. It can create a multitude of effects on the environment. Some examples include, land disturbance, pollution, increasing temperatures and a disturbance in vegetation and biodiversity. Insects are useful organisms that provide maintenance and upkeep for ecosystem functioning. The rapid development of urbanization and how it is changing the environment may impact insect morphology. Measuring morphological change in organisms have been used successfully as indicators of environmental and ecological disturbance. Changes that take place in an insect’s morphology may indicate …

A Baseline Documentation Report For The Delta Wind Birds Sky Lake Nature Reserve, James Dubberly

Honors Theses

The purpose of this baseline documentation is to conduct a report on our subject property and discuss the findings. A conservation easement is established by upholding a certain standard of a property’s current condition which makes a baseline documentation necessary for an easement to be enacted. Baseline documentation reports are used as a resource to monitor and enforce the legal agreements of the conservation easement. The subject property is currently owned by the Delta Wind Birds organization. In our scenario, this documentation report will serve to aid in the conversion of our subject property into a conservation easement in which …

Density Dependent Growth Of Pseudomonas Fluorescens In The Presence And Absence Of C. Elegans Predation In Liquid Media, Jack Landmann

Honors Theses

The purpose of this study was to understand the predator-prey relationship between C. elegans worms and P. fluorescens bacteria in liquid media. We were aiming to create a predation model of the relationship between these two species.

This study was performed through three experiments. Using 96-well plates, we were able to measure the change in optical density (OD) of these wells and calculate the growth rate. This growth rate was then graphed and analyzed. The first experiment contained P. fluorescens and KB liquid media, this study demonstrated that the bacterial population has a carrying capacity. We were also able to …