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Ecology and Evolutionary Biology

Doctoral Dissertations

Phylogenetics

Publication Year

Articles 1 - 4 of 4

Full-Text Articles in Life Sciences

Systematics, Diversification, And Functional Diversity Of Russulaceae (Russulales), Brian Patrick Looney May 2017

Systematics, Diversification, And Functional Diversity Of Russulaceae (Russulales), Brian Patrick Looney

Doctoral Dissertations

The family Russulaceae is an iconic family of mushroom-forming Basidiomycetes both because of their importance as edible mushrooms in many parts of the world and their species richness in both temperate and tropical forested biomes. While much mycological research has been focused on this group, recent systematic and ecological research has failed to develop a comprehensive or cohesive organization by which to understand the evolutionary relationships, patterns of diversification, or functional importance of the group. Recently, interest in ectomycorrhizal fungi (EmF), of which Russulaceae is a key lineage, has greatly increased due to the recognition of the importance of EmF …


Using Phylogenetic Comparative Methods To Understand Diversification And Geographic Range Evolution, Kathryn Aurora Massana May 2017

Using Phylogenetic Comparative Methods To Understand Diversification And Geographic Range Evolution, Kathryn Aurora Massana

Doctoral Dissertations

Two key processes that have been modeled in a phylogenetic comparative framework are diversification and historical biogeography. Many questions arise on what process have shaped the abundance (or lack) of species we see today and what influences their survival and interconnectedness with other species. Many methods have been developed to answer these questions. Over the past several decades there has been a rise in parametric modeling and development of more adequate frameworks to answer biological questions of interest. However, many models still lack the incorporation of ecological, mainly biotic factors, which influence the evolution and ecology of species, while accounting …


Adaptive Radiation Along A Benthic/Pelagic Ecological Axis In North America’S Most Diverse, Endemic Clade Of Freshwater Fishes, Phillip Ray Hollingsworth Jr. May 2014

Adaptive Radiation Along A Benthic/Pelagic Ecological Axis In North America’S Most Diverse, Endemic Clade Of Freshwater Fishes, Phillip Ray Hollingsworth Jr.

Doctoral Dissertations

Eastern North America is unparalleled throughout the temperate world in terms of freshwater fish biodiversity. A monophyletic group of approximately 250 cyprinid fishes, known as the open posterior myodome (OPM) clade, dominates the fish species richness in the freshwater ecosystems of this region. In this dissertation, I explore the influence of eco-evolutionary divergence along a benthic/pelagic habitat axis on the generation of this hyper-diverse group of fishes. My three chapters work synergistically to address the question: Did a historical shift from benthic to pelagic habitats by OPM cyprinids represent the invasion of an open adaptive zone and result in the …


Evolution, Speciation, And Conservation Of Amblyopsid Cavefishes, Matthew Lance Niemiller Aug 2011

Evolution, Speciation, And Conservation Of Amblyopsid Cavefishes, Matthew Lance Niemiller

Doctoral Dissertations

Cave organisms are classic examples of regressive evolution, as many disparate taxa have evolved similar convergent phenotypes in subterranean environments. While recent phylogeographic and population genetic analyses have greatly improved our understanding of the evolutionary and biogeographic history of cave organisms, many questions remain unanswered or poorly investigated. I investigated several evolutionary and biogeographic questions in a model system for regressive evolution and studies of ecological and evolutionary mechanisms, amblyopsid cavefishes. In chapter I, I used recently developed methods to delimit species boundaries and relationships in a widely distributed cavefish, Typhlichthys. I show that species diversity in Typhlichthys is …