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Ecology and Evolutionary Biology

Portland State University

Life -- Origin

Articles 1 - 3 of 3

Full-Text Articles in Life Sciences

Prebiotic Rna Network Formation: A Taxonomy Of Molecular Cooperation, Cole Mathis, Sanjay N. Ramprasad, Sara Imari Walker, Niles Lehman Oct 2017

Prebiotic Rna Network Formation: A Taxonomy Of Molecular Cooperation, Cole Mathis, Sanjay N. Ramprasad, Sara Imari Walker, Niles Lehman

Chemistry Faculty Publications and Presentations

Cooperation is essential for evolution of biological complexity. Recent work has shown game theoretic arguments, commonly used to model biological cooperation, can also illuminate the dynamics of chemical systems. Here we investigate the types of cooperation possible in a real RNA system based on the Azoarcusribozyme, by constructing a taxonomy of possible cooperative groups. We construct a computational model of this system to investigate the features of the real system promoting cooperation. We find triplet interactions among genotypes are intrinsically biased towards cooperation due to the particular distribution of catalytic rate constants measured empirically in the real system. For other …


The Chemical Origin Of Behavior Is Rooted In Abiogenesis, Brian C. Larson, R. Paul Jensen, Niles Lehman Nov 2012

The Chemical Origin Of Behavior Is Rooted In Abiogenesis, Brian C. Larson, R. Paul Jensen, Niles Lehman

Chemistry Faculty Publications and Presentations

We describe the initial realization of behavior in the biosphere, which we term behavioral chemistry. If molecules are complex enough to attain a stochastic element to their structural conformation in such as a way as to radically affect their function in a biological (evolvable) setting, then they have the capacity to behave. This circumstance is described here as behavioral chemistry, unique in its definition from the colloquial chemical behavior. This transition between chemical behavior and behavioral chemistry need be explicit when discussing the root cause of behavior, which itself lies squarely at the origins of life and is the foundation …


The Complexity-Independence Of The Origin Of Life, Radu Popa Nov 2009

The Complexity-Independence Of The Origin Of Life, Radu Popa

Systems Science Friday Noon Seminar Series

It is often stated that the macroevolution of life is driven toward increased Complexity, and indeed, biosystems situated at higher evolutionary level show higher levels of Complexity. Yet, evidence also shows that some dynamic systems evolve toward lower entropy states, and not by increasing Complexity, but by increasing Organization. Organization is a parameter with two almost orthogonal components: Order and Complexity. Hence, it is possible for a dynamic system to experience changes in Organization in ways that do not elicit changes in Complexity. Whether Order or Complexity controls changes in Organization is dictated by the capacity of a system to …