Life Sciences Commons^™

The Plant Structure Ontology, A Unified Vocabulary Of Anatomy And Morphology Of A Flowering Plant, Katica Ilic, Elizabeth Kellogg, Pankaj Jaiswal, Felipe Zapata, Peter Stevens, Leszek Vincent, Shulamit Avraham, Leonore Reiser, Anuradha Pujar, Martin Sachs, Noah Whitman, Susan Mccouch, Mary Schaeffer, Doreen Ware, Lincoln Stein, Seung Rhee

Biology Department Faculty Works

Formal description of plant phenotypes and standardized annotation of gene expression and protein localization data require uniform terminology that accurately describes plant anatomy and morphology. This facilitates cross species comparative studies and quantitative comparison of phenotypes and expression patterns. A major drawback is variable terminology that is used to describe plant anatomy and morphology in publications and genomic databases for different species. The same terms are sometimes applied to different plant structures in different taxonomic groups. Conversely, similar structures are named by their species-specific terms. To address this problem, we created the Plant Structure Ontology (PSO), the first generic ontological …

The Plant Structure Ontology, A Unified Vocabulary Of Anatomy And Morphology Of A Flowering Plant, Katica Ilic, Elizabeth A. Kellogg, Pankaj Jaiswal, Felipe Zapata, Peter F. Stevens, Leszek P. Vincent, Shulamit Avraham, Leonore Reiser, Anuradha Pujar, Martin M. Sachs, Noah T. Whitman, Susan R. Mccouch, Mary L. Schaeffer, Doreen H. Ware, Lincoln D. Stein, Seung Y. Rhee

Peter Stevens

Checklist And Atlas Of The Vascular Flora Of West Virginia, Donna I. Ford-Werntz, Paul J. Harmon, William Grafton

WV Flora Datasets

No abstract provided.

Amphibians And Reptiles In A Mixed-Grass Prairie In Northwestern North Dakota, Robert K. Murphy, Robert F. Danley, Patricia K. Moore

The Prairie Naturalist

There have been almost no surveys of herpetofauna at 109 km² Lostwood National Wildlife Refuge (LNWR) or surrounding counties in northwestern North Dakota, an area possibly undergoing significant environmental change from fossil fuel extraction and use. We used 30 m drift fences to survey amphibian and reptile species in prairie-wetland transition zones at LNWR during mid-May to early-July in 1985 to 1987, and again in 1999 and 2000. We captured only four amphibian and two reptilian species and noted one other reptilian species incidental to our survey. Several species expected to occur in the area were not detected.

The Prairie Naturalist, Volume 38, Number 4, December 2006, Elmer J. Finck, Hilary Gillock

The Prairie Naturalist

Full issue of The Prairie Naturalist (December 2006), volume 38, number 4.

Amphibians and Reptiles in a MixedGrass Prairie in Northwestern North Dakota by Robert K. Murphy, Robert F. Danley, and Patricia K. Moore, pages 207-212

Morphometrics of Six Turtle Species from South Dakota by Sarah J. Bandas and Kenneth F. Higgins, pages 213-222

Evaluation of Habitat Enhancement Structure Use by Spotted Bass by Stanley L. Proboszcz and Christopher S. Guy, pages 223-238

Evaluating Diet Composition of Pronghorn in Wind Cave National Park, South Dakota by Christopher N. Jacques , Jaret D. Sievers, Jonathan A. Jenks, Chad L. Sexton, and …

Probing Precursor Interactions With The Chloroplast Import Apparatus, Sarah Jean Wright

Masters Theses

The majority of plastid proteins are nuclear-encoded and imported post-translationally. A cleavable N-terminal extension, the transit peptide, targets these preproteins to the plastid. Transit peptides show very little primary sequence homology, yet are able to direct the precursor protein to interact with the protein components of the translocation complexes located within the inner and outer membranes of the chloroplast. In this study, a semi-conserved motif of the transit peptide, (F/W)(P/G)h(R/K) has been targeted for deletion in order to probe its importance. Two corresponding regions were deleted in the transit peptide of the precursor to the small subunit of Rubisco (prSSU) …

The Prairie Naturalist, Volume 38, 2006: Reviewers, Author Index, And Subject Index, Elmer J. Finck, Hilary Gillock

The Prairie Naturalist

The list of reviewers, author index, and subject index for volume 38 (2006) of The Prairie Naturalist published by the Great Plains Natural Science Society out of Fort Hays State University in Kansas, United States.

Comptonia Peregrina (L.) J.M. Coult., Gordon C. Tucker

Specimens by Name

No abstract provided.

Sfa Gardens Newsletter, Oct 2006, Sfa Gardens, Stephen F. Austin State University

SFA Gardens Newsletters

No abstract provided.

Artificial Burrows And The Deer Mouse: Do Number Of Entrances Influence Use?, Glennis A. Kaufman, Donald W. Kaufman

The Prairie Naturalist

We examined use of artificial burrows by the deer mouse (Peromyscus maniculatus) in mixed grass prairie in north central Kansas. We predicted differential use of burrows, such that the deer mouse would prefer two entrance burrows in non-winter months when predatory snakes were active, but prefer one entrance burrows in winter when cold, windy conditions existed. We installed 20 pairs of artificial burrows (one single entrance and one double entrance) in summer 1988. We examined these burrows on seven dates from autumn 1988 to autumn 1989. All mice (n = 70) used two entrance burrows at least …

First Record Of The Least Shrew In Wyoming; And Clostridium Perfingens Type A Enterotoxemia In A Captive Adult White-Tailed Deer, Shauna R. Marquardt, Brian C. Bartels, Cheryl A. Schmidt, Joshua A. Delger, Kevin L. Monteith, Jonathan A. Jenks

The Prairie Naturalist

First Record of the Leaast Shrew in Wyoming by Shauna R. Marquardt, Brian C. Bartels, and Cheryl A. Schmidt; and Clostridium perfingens Type A Enterotoxemia in a Captive Adult White-tailed Deer by Joshua A. Delger , Kevin L. Monteith, and Jonathan A. Jenks.

Habitat Characteristics Of Spring Blackbird Roosts In East-Central South Dakota, H. Jeffrey Homan, Richard S. Sawin, George M. Linz, William J. Bleier

The Prairie Naturalist

In the northern Great Plains, blackbirds (Icteridae) roost almost exclusively in emergent-dominated wetlands. The physical characteristics of wetland roosts are not well understood. From March 20 to April 20, 1999, we studied 16 wetlands used as blackbird roosts in east-central South Dakota. Six wetlands had major roosts (range: 102,000-298,000 blackbirds); whereas, 10 wetlands had minor roosts (range: 2,010-34,000 blackbirds). Maximum roost size was correlated directly with emergent vegetation area (P = 0.05) and possibly with wetland basin area (P ≤ 0.10). Water depths were greater at used sites within wetlands of major roosts (median = 44 cm) than …

The Prairie Naturalist, Volume 38, Number 3, September 2006, Elmer J. Finck, Hilary Gillock

The Prairie Naturalist

The Prairie Naturalist (September 2006) 38(3)

Editor: Elmer J. Finck

Assistant editor: Hilary Gillock

Great Plains Natural Science Society

Artificial Burrows and the Deer Mouse: Do Number of Entrances Influence Use? GLENNIS A. KAUFMAN1 and DONALD W. KAUFMAN, pages 145-154

Evaluating Genetic Viability of Pronghorn in Wind Cave National Park JONATHAN A. JENKSi , CHRISTOPHER N. JACQUES, JARET D. SIEVERS, ROBERT W. KLAVER, R. TERRY BOWYER, and DANIEL E. RODDY, pages 155-165

Age Structure and Reproductive Activity of the Blue Sucker in the Milk River, Missouri River Drainage, Montana JULIE BEDNARSKl1 and DENNIS L. SCARNECCHIA, pages 167-182

Habitat Characteristics of …

Reviews: Natural History Of Javelinas; And Three Dvds On Bats, Louis A. Harveson, Jean Legge

The Prairie Naturalist

Reviews of Javelinas: Collared Peccaries of the Southwest (2006) by Jane Manaster, Texas Tech University Press, Lubbock, Texas, 85 pages (review by Louis A. Harveson) and of The Secret World of Bats (DVD), Building Homes for Bats (DVD), and Kids Discover Bats (DVD) (2005) published by Bat Conservation International (review by Jean Legge).

Morella Cerifera Small, Gerry Moore

Specimens by Name

No abstract provided.

Phyla Lanceolata (Michx.) Greene, Gordon C. Tucker

Specimens by Name

No abstract provided.

Parthenocissus Vitacea (Knerr) A.S. Hitchc., Martin G. Bennett

Specimens by Name

No abstract provided.

The Geometry Of The Forisome–Sieve Element–Sieve Plate Complex In The Phloem Of Vicia Faba L. Leaflets, Winfried Peters, Aart Van Bel, Michael Knoblauch

Winfried S. Peters

Verbena Urticifolia L., Gordon C. Tucker

Specimens by Name

No abstract provided.

Acer Saccharum Marshall, Gordon C. Tucker

Specimens by Name

No abstract provided.

Lysimachia Ciliata L., Kerry Barringer

Specimens by Name

No abstract provided.

Vitis Vulpina L., Gordon C. Tucker

Specimens by Name

No abstract provided.

Field Evaluation Of Herbicides On Rice 2005, Drew T. Ellis, Ronald E. Talbert, Marilyn R. Mcclelland

Arkansas Agricultural Experiment Station Research Series

Field studies to evaluate herbicides in rice weed management systems were conducted in 2005 at the Rice Research and Extension Center near Stuttgart, Arkansas. New herbicides, herbicide mixtures, and application timings were evaluated for weed control efficacy and rice tolerance. Results of these studies, in part, provide useful information to producers, fellow researchers, and the crop protection industry for the most effective, economical herbicide programs for successful rice production in Arkansas.

Sfa Gardens Newsletter, July 2006, Sfa Gardens, Stephen F. Austin State University

SFA Gardens Newsletters

No abstract provided.

Forisome Based Biomimetic Smart Materials, Amy Shen, Benjamin Hamlington, Michael Knoblauch, Winfried Peters, William Pickard

Winfried S. Peters

Anagallis Arvensis L., Gordon C. Tucker

Specimens by Name

No abstract provided.

Lysimachia Ciliata L., John E. Ebinger

Specimens by Name

No abstract provided.

Anagallis Arvensis L., Gordon C. Tucker

Specimens by Name

No abstract provided.

Acer Nigrum Michx.F., Gordon C. Tucker

Specimens by Name

No abstract provided.

Verbena Stricta Vent., Natasha Shurtz

Specimens by Name

No abstract provided.