Life Sciences Commons^™

Diet Composition And Mercury Exposure In Bank Swallows (Riparia Riparia) Breeding At Lakeshore And Aggregate Pits, Corrine S. V. Génier

Electronic Thesis and Dissertation Repository

Bank Swallows (Riparia riparia), a threatened species in Ontario, breed primarily in banks at lakeshores and in artificial aggregate pits. Inland pits may be ecological traps for this species, but the relative tradeoffs between these two nesting habitats are unknown. Availability of aquatic emergent insects at lakeshores may have associated nutritional benefits (e.g. Omega-3 fatty acids) and contaminants (e.g. mercury) that can directly influence juvenile growth. This study compares these breeding habitats to evaluate dietary differences as revealed by fatty acids, stable isotopes (δ¹³C, δ¹⁵N, δ²H), fecal DNA barcoding, and mercury. Lakeshore-nesting …

Engineering Self-Assembling Proteins To Produce A Safe And Effective Vaccine For Porcine Reproductive And Respiratory Syndrome, Ondre H. Harper

Electronic Thesis and Dissertation Repository

Commercially available vaccines for porcine reproductive and respiratory syndrome virus (PRRSV) provide some control over the virus but none are ideal since they either are not completely safe for use, lack efficacy in promoting long-lasting immunity or provide no protection from heterologous PRRSV strains. Innovative approaches to designing vaccines are being pursued to overcome these drawbacks. One example is the use of nanoparticles to present a dense array of antigenic epitopes to the immune system which can effectively stimulate antibody producing cells (B cells) and T cells, resulting in long-lasting immunity. Here, I genetically fused antigenic epitopes from PRRSV to …

Bioremediation Of Refinery Desalter Effluent Using Debaryomyces Hansenii And Parachlorella Kessleri, Leila Azimian

Electronic Thesis and Dissertation Repository

Crude oil desalting operations produce an effluent stream which is challenging to treat due to its salt, heavy metal and hydrocarbon content. Consequently, desalter effluent (DE) is usually diluted into other effluent streams and sent to conventional wastewater treatment plants which may lead to upsets the plant operation.

In this study, a novel microbial approach was applied which investigated DE treatment using halotolerant yeast Debaryomyces hansenii (LAF-3 10 U) or the environmentally robust micro-algae Parachlorella kessleri strain CPCC 266. The effect of these two different approaches on both synthetic and actual DE was investigated in both batch and/or continuous mode. …

Tracing Nutrient Sources To Lipid Production In Birds And Insects Using Stable Isotope (Δ13c, Δ2h) Tracers: Implications For Nutritional Physiology Of Migratory Species, Libesha Anparasan

Electronic Thesis and Dissertation Repository

Using stable isotope measurements of inert tissues to determine origins and migratory patterns is well established. However, isotopically determining nutritional origins of lipids, the primary fuel of migration, has not been attempted. I explored isotopic links between diet and stored lipids in captive White-throated Sparrows (Zonotrichia albicollis) and true armyworm moths (Mythimna unipuncta) using δ¹³C and δ²H measurements. Isotopic discrimination between body lipids and diet was established as linear calibration functions. Isotopic uptake following a diet switch in moths was used to trace lipid accumulation over time. Isotopic correlations between breath metabolic …

The Stability Of Temperate Lakes Under The Changing Climate, Aleksey Paltsev

Electronic Thesis and Dissertation Repository

There is a collective prediction among ecologists that climate change will enhance phytoplankton biomass in temperate lakes. Yet there is noteworthy variation in the structure and regulating functions of lakes to make this statement challengeable and, perhaps, inaccurate. To generate a common understanding on the trophic transition of lakes, I examined the interactive effects of climate change and landscape properties on phytoplankton biomass in 12,644 lakes located in relatively intact forested landscapes. Chlorophyll-a (Chl-a) concentration was used as a proxy for phytoplankton biomass. Chl-a concentration was obtained via analyzing Landsat satellite imagery data over a 28-year period (1984-2011) and using …

The Relative Importance Of Larval And Adult Nutrition In The Isotopic Profile Of The Spermatophore Produced By The Male True Armyworm Moth (Mythimna Unipuncta) (Haworth)., Aida Parvizi

Electronic Thesis and Dissertation Repository

The wings of true armyworm (Mythimna unipuncta) are metabolically inactive tissue and as their isotopic profiles are determined by resources obtained during larval development, they provide information on natal origin of immigrants. The majority of female immigrants are mated so could the isotopic profiles of spermatophores dissected from her reproductive tract provide information about the natal origin of her mates? However, as spermatophores are produced by metabolically active male accessory glands and could use resources obtained from larval and adult feeding I conducted experiments to determine the relative importance of these two dietary sources on the isotopic profiles …

The Cost Of Protection: Frost Avoidance And Competition In Herbaceous Plants, Frederick Curtis Lubbe

Electronic Thesis and Dissertation Repository

Perennial herbaceous plants in regions that experience winter freezing must survive using belowground structures that can tolerate or avoid frost stress. Soil and plant litter can insulate plant structures from frost exposure, but plants must invest into growth to penetrate through these layers to reach the surface in the spring. The overall goal of my thesis was to test the hypothesis that the protection of overwintering clonal structures by soil or plant litter (frost avoidance) comes at the expense of subsequent reduced growth and competitive ability in absence of freezing stress. I first explored this trade-off with a suite of …

Cross-Species Utility Of The Mouse Diversity Genotyping Array In Assaying Single Nucleotide Polymorphisms, Rachel Kelly

Electronic Thesis and Dissertation Repository

In the study of genetic diversity in non-model species there is a notable lack of the low-cost, high resolution tools that are readily available for model organisms. Genotyping microarray technology for model organisms is well-developed, affordable, and potentially adaptable for cross-species hybridization. The Mouse Diversity Genotyping Array (MDGA), a single nucleotide polymorphism (SNP) genotyping tool designed for M. musculus, was tested as a tool to survey genomic diversity of wild species for inter-order, inter-family, inter-genus, and intra-genus comparisons. Application of the MDGA cross-species provides genetic distance information that reflects known taxonomic relationships reported previously between non-model species, but there …

Differential Vulnerability To Window Collision Mortality Among Migratory Songbird Species, Olivia M. Colling

Electronic Thesis and Dissertation Repository

Millions of birds die annually in North America by colliding with windows. I investigated differential vulnerability to window collision among migratory songbird species using long-term citizen science datasets from two bird banding stations and the fatal light awareness program. I used negative binomial regressions to model species-specific catch ratios, a mixed-effects negative binomial regression to model trophic guild-specific catch ratios and mixed-effects logistic regressions to model the odds of catching different age classes. Species-specific vulnerability varied significantly. Blue-headed Vireos, Yellow-rumped Warblers and Ruby-crowned Kinglets were least vulnerable, while Ovenbirds, Common Yellowthroats, Fox Sparrows and Bay-breasted Warblers were most vulnerable. Foraging …

Major Histocompatibility Complex Does Not Affect Mating Patterns In Bluegill Sunfish (Lepomis Macrochirus), Lucas Silveira

Electronic Thesis and Dissertation Repository

In many species, individuals prefer mates that are genetically dissimilar at the major histocompatibility complex (MHC). This is likely because it improves offspring resistance to pathogens. Here I provide the first genotypic characterization of the MHC class II peptide binding region in bluegill (Lepomis macrochirus), a species of sunfish, and examine its effect on mating patterns. I hypothesized females would choose to mate with MHC dissimilar males leading to an increase in the resulting offspring’s fitness. I captured females and males during spawning and sequenced the DNA of these fish at the MHC class II putative peptide binding …

Tetranychus Urticae Adaptation To Tomato, Kristie A. Bruinsma

Electronic Thesis and Dissertation Repository

The arms race between plants and herbivores has resulted in a great diversity of plant compounds to act as defences against attackers. It has concurrently resulted in herbivorous pest adaptations to host defences, including plant-host defence suppression through the action of secreted effectors, and detoxification of phytochemicals ingested during feeding. While these two mechanisms of herbivore adaptation are relatively well studied, they have not been tested for use at the same time. This study uses the model plant species Solanum lycopersicum (tomato), and the model arthropod species Tetranychus urticae (two-spotted spider mite), to characterize the utilization of the above-mentioned mechanisms …

The Lotus Japonicus Short Internodes/Stylish Gene Family And Its Role During Root Nodule Development, Arina Shrestha

Electronic Thesis and Dissertation Repository

The ability to host nitrogen-fixing bacteria, which convert atmospheric di-nitrogen to ammonia, inside root cells is a special adaptation of most leguminous and only some non-leguminous plants. It engenders the development of new, root-derived organs, called nodules. Significant research effort has been dedicated to understanding how these ultimate nitrogen-fixing plant organs are built. Nonetheless, important gaps with respect to pertinent knowledge still remain.

My thesis work has focused on deciphering the role of the SHORT INTERNODES/STYLISH (SHI/STY) transcription factor gene family during nodule formation in Lotus japonicus, a model legume plant. I show here that the SHI/STY …

Translational Control Of Stress Induced Breast Cancer Plasticity, Michael Jewer

Electronic Thesis and Dissertation Repository

Cancer cell plasticity, whereby stem-cell-like properties are acquired in response to stress, represents a major challenge in cancer treatment. Using cell line and patient-derived xenograft (PDX) models, we demonstrate that translational reprogramming occurs in response to stresses such as hypoxia and chemotherapy which elicits stem cell properties in breast cancer. Other stresses like chemotherapy demonstrate the translational inhibition that has been well characterized as an integral hypoxic cellular response. The inhibition of translation is primarily regulated at initiation by mTOR/4E-BP1 and PERK/eIF2α signalling. We identify previously undescribed 5’ untranslated regions (5’UTRs) of plasticity-associated genes like NANOG, SNAIL and NODAL. …

Partial Characterization Of Putative Cyp86a Genes From Soybean, Trish Tully

Electronic Thesis and Dissertation Repository

Soybean (Glycine max [L.] Merr.) is a globally cultivated crop that is important to the sustainability of many industries. However, like all plants, optimal cultivation of soybean is threatened by detrimental environmental factors. For example, high yield of soybean is threatened by soil-borne pathogens like Phytophthora sojae. Resistance against P. sojae was previously positively correlated with aliphatic suberin deposition in soybean. As such, a deeper understanding of the biosynthesis of suberin may assist in engineering a resistant form of soybean, based on enhanced suberin content. In soybean, the ω-OH fatty acid monomers are predominant and most strongly correlated …

The Role Of H3k4 Methyltransferases In Drosophila Memory, Nicholas Raun

Electronic Thesis and Dissertation Repository

Gene transcription required for long-term memory requires the modification of histones. However, there are still many uncertainties about the identity and spatial expression of genes regulated by histone modifications during memory related processes. In this project I examined the role of Drosophila melanogaster methyltransferases Set1 and trx in courtship memory. Genetic knockdown of Set1 and trx in the mushroom body (MB) revealed that Set1 was necessary for short- and long-term memory, while trx was only required for long-term memory. Transcriptional profiling of MBs following trx-knockdown revealed expression changes in MB-enriched genes and genes involved in RNA processing. Among the …