Life Sciences Commons^™

A Life Cycle Analysis Of Land Use In Us Pork Production, Greg Thoma, Marty Matlock, Ben Putman, Jasmina Burek

Food Systems

The goal of this study was to analyze land use in the production of US pork using Life Cycle Assessment (LCA). LCA is a comprehensive methodology for quantitatively analyzing potential environmental impacts associated with complex systems. Identification of processes contributing to high environmental impacts often highlights opportunities for gains in efficiency, which can increase the profitability and sustainability of US pork. The environmental impact category analyzed in this assessment was land use. After reviewing existing information regarding land use in agriculture and livestock production, analysis for US pork production was performed at two scales: cradle-to-grave and cradle-to-farm gate. The cradle-to-grave …

Quantifying The Adaptive Cycle, David G. Angeler, Craig R. Allen, Ahjond S. Garmestani, Lance H. Gunderson, Olle Hjerne, Monika Winder

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

The adaptive cycle was proposed as a conceptual model to portray patterns of change in complex systems. Despite the model having potential for elucidating change across systems, it has been used mainly as a metaphor, describing system dynamics qualitatively. We use a quantitative approach for testing premises (reorganisation, conservatism, adaptation) in the adaptive cycle, using Baltic Sea phytoplankton communities as an example of such complex system dynamics. Phytoplankton organizes in recurring spring and summer blooms, a well-established paradigm in planktology and succession theory, with characteristic temporal trajectories during blooms that may be consistent with adaptive cycle phases. We used long-term …

Manipulation Of Ovarian Function Significantly Influenced Trabecular And Cortical Bone Volume, Architecture And Density In Mice At Death, Jeffrey B. Mason, Boston C. Terry, Samer S. Merchant, Holly M. Mason, Mahdi Nazokkarmaher

Animal, Dairy, and Veterinary Science Faculty Publications

Previously, transplantation of ovaries from young, cycling mice into old, postreproductive-age mice increased life span and decreased cardiomyopathy at death. We anticipated that the same factors that increased life span and decreased cardiomyopathy could also influence the progression of orthopedic disease. At 11 months of age, prepubertally ovariectomized and ovary-intact mice (including reproductively cycling and acyclic mice) received new 60-day-old ovaries. At death, epiphyseal bone in the proximal tibia and the distal femur and mid-shaft tibial and femoral diaphyseal bone was analyzed with micro-computed tomography. For qualitative analysis of osteophytosis, we also included mineralized connective tissue within the stifle joint. …

Phylogenetic Investigation Of Enteric Bovine Coronavirus In Ireland Reveals Partitioning Between European And Global Strains, Lynda Gunn, P. J. Collins, M. J. O'Connell, Helen O'Shea

Department of Biological Sciences Publications

Background

Bovine coronavirus is a primary cause of neonatal calf diarrhea worldwide, and is also associated with acute diarrhea in adult cattle during the winter season. There are no reports on molecular characterization of bovine coronavirus in Ireland, and little data exists apart from serological studies.

Findings

In this study, 11 neonatal (mean age 9 days) calf BCoV strains from the south of Ireland were collected over a one year period and characterized using molecular methods. The spike gene which encodes a protein involved in viral entry, infectivity and immune response shows the most variability amongst the isolates and was …

Summer-Long Grazing Of High Vs. Low Endophyte (Neotyphodium Coenophialum)-Infected Tall Fescue By Growing Beef Steers Results In Distinct Temporal Blood Analyte Response Patterns, With Poor Correlation To Serum Prolactin Levels, Joshua J. Jackson, Merlin D. Lindemann, James A. Boling, James C. Matthews

Animal and Food Sciences Faculty Publications

Previously, we reported the effects of fescue toxicosis on developing Angus-cross steer growth, carcass, hepatic mRNA, and protein expression profiles of selected serum proteins, and blood clinical and chemical profiles, after summer-long grazing (85 days) of high endophyte (HE)- vs. low endophyte (LE)-infected fescue pastures. We now report the temporal development of acute, intermediate, and chronic responses of biochemical and clinical blood analytes determined at specified time intervals (period 1, day 0–36; period 2, day 37–58; and period 3, day 59–85). Throughout the trial, the alkaloid concentrations of the HE forage was consistently 19–25 times greater (P ≤ 0.002) …

The Status Of Fishes In The Missouri River, Nebraska: Selected Ancient Fishes, Kirk D. Steffensen

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Several ancient fish species have inhabited the Missouri River and its tributaries for thousands of years prior to major mainstem modifications and fragmentation. However post-anthropogenic modifications, populations of these ancient fish species have been highly diminished. Therefore, the objective of this study was to use historic and current ichthyological records to determine the past and present status for Chestnut Lamprey Ichthyomyzon castaneus, Silver Lamprey Ichthyomyzon unicuspis, Bowfin Amia calva, American Eel Anguilla rostrata, and Burbot Lota lota. Currently, these species are rarely captured and perhaps extirpated from Nebraska waters.

Free Mate Choice Enhances Conservation Breeding In The Endangered Giant Panda, Meghan S. Martin-Wintle, David J. Shepherdson, Guiquan Zhang, Hemin Zhang, Desheng Li, Xiaoping Zhou, Rengui Li, Ronald R. Swaisgood

Biology Faculty Publications and Presentations

Conservation breeding programmes have become an increasingly important tool to save endangered species, yet despite the allocation of significant resources, efforts to create self-sustaining populations have met with limited success. The iconic giant panda (Ailuropoda melanoleuca) embodies the struggles associated with ex situ species conservation. Here we show that behavioural mate preferences in giant pandas predict reproductive outcomes. Giant pandas paired with preferred partners have significantly higher copulation and birth rates. Reproductive rates increase further when both partners show mutual preference for one another. If managers were to incorporate mate preferences more fully into breeding management, the production of giant …

Longevity Of Mineral Supplements Within The Soil And Associated Use By White-Tailed Deer, Brian C. Peterson, Keith D. Koupal, Andrew K. Schissel, Cody M. Siegel

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Humans have baited wildlife such as white-tailed deer (Odocoileus virginianus) for generations with the primary purpose of increasing hunting harvest success. Baiting regulation changes are often considered by state management agencies as they pertain to hunting opportunity, fair chase, and disease risk. Cervids require a variety of minerals to supplement biological processes, especially sodium (Na), calcium (Ca), and phosphorus (P). We developed artificial mineral supplement sites set in front of trail cameras to monitor deer use. Pooled soil samples were collected at mineral sites and compared to the surrounding area to determine the longevity of elevated minerals levels …

Genomic Legacy Of The African Cheetah, Acinonyx Jubatus, Pavel Dobrynin, Shiping Liu, Gaik Tamazian, Zijun Xiong, Andrey A. Yurchenko, Ksenia Krasheninnikova, Sergey Kliver, A. Schmidt-Kunzel, Klaus-Peter Koepfli, Warren E. Johnson, Lukas F. K. Kuderna, Raquel Garcia-Perez, Marc De Manuel, Ricardo Godinez, Aleksey Komissarov, Alexey Makunin, Vladimir Brukhin, Weilin Qiu, Long Zhou, Fang Li, Jian Yi, Carlos A. Driscoll, Agostinho Antunes, T. K. Oleksyk, Eduardo Eizirik, Polina Perelman, Melody E. Roelke, David E. Wildt, Mark Diekhans, Tomas Marques-Bonet, Laurie Marker, Jong Bhak, Jun Wang, Guojie Zhang, Stephen J. O'Brien

Biology Faculty Articles

Background

Patterns of genetic and genomic variance are informative in inferring population history for human, model species and endangered populations.

Results

Here the genome sequence of wild-born African cheetahs reveals extreme genomic depletion in SNV incidence, SNV density, SNVs of coding genes, MHC class I and II genes, and mitochondrial DNA SNVs. Cheetah genomes are on average 95 % homozygous compared to the genomes of the outbred domestic cat (24.08 % homozygous), Virunga Mountain Gorilla (78.12 %), inbred Abyssinian cat (62.63 %), Tasmanian devil, domestic dog and other mammalian species. Demographic estimators impute two ancestral population bottlenecks: one >100,000 years …

Genetic Parameters For Docility, Weaning Weight, Yearling Weight, And Intramuscular Fat Percentage In Hereford Cattle, J. A. Torres-Vázquez, Matthew L. Spangler

Department of Animal Science: Faculty Publications

Cattle behavior, including measures of docility, is important to beef cattle producers not only from a human safety perspective but also due to potential correlations to economically relevant traits. Field data from the American Hereford Association was used to estimate genetic parameters for chute score (CS; n = 25,037), weaning weight (WW; n = 24,908), yearling weight (YW; n = 23,978), and intramuscular fat percentage (IMF; n = 12,566). Single-trait and bivariate animal models were used to estimate heritabilities and genetic correlations. All models included fixed effects of sex and contemporary group, defined as herd–year–season, and direct genetic and residual …

Discovery & Born-Digital Archiving: Open Source Systems For Preservation And Access, L. Bryan Cooper, Margarita Perez-Martinez

Works of the FIU Libraries

The Everglades Explorer (EE) portal at http://ee.fiu.edu continues to evolve with the addition of the Internet Archive's Archive-It, and future planned alignment with the Digital Public Library of America (DPLA). The reasons for the development of the portal continue to exist, as originally perceived four years ago. Adaptations to ongoing change and system testing continues, and the use of Archive-It has broad institutional potential beyond EE. Cross-walking skills continue to grown, and will benefit future syndication and discovery system integration. The metadata normalization and harmonization will help save time for the end-user. Preservation and access to learning and research …

Production And Economic Efficiencies Of Intensified Cow-Calf Production Management Systems, Jason M. Warner

Department of Animal Science: Dissertations, Theses, and Student Research

The objective of four experiments conducted was to evaluate production and economic efficiencies of intensified cow-calf production management systems. The first experiment tested the effect of calf age at weaning on cow and calf performance and feed utilization at 2 locations. Body weight change from early to conventional weaning time was greater for early-weaned cows. Cow BCS and conception rates were not impacted by weaning. Calf BW at conventional weaning time was greater for conventionally-weaned calves than early-weaned calves at ARDC, but greater for early-weaned than conventionally-weaned calves at PHREC. Calf ADG per unit of total feed energy intake was …

Efficiency Of Energy Utilization And Fecal Mineral Excretion In Holstein And Jersey Dairy Cows, Gabriel Garcia Gomez

Department of Animal Science: Dissertations, Theses, and Student Research

Eight multiparous Holstein and 8 Jersey dairy cows were used to complete energy balance trials designed to determine the effect of breed on the production and energy efficiency of milk, and energy partitioning. A repeated switchback design was used to compare the effect of cow breed. Diets consisted of 24.5% corn silage, 18.4% alfalfa hay, 6.9% grass hay, with either 22.9% rolled corn and 14.8% soybean meal (CON) or 8.95% rolled corn and 28.8% reduced fat distillers grains (RFDDGS) DM-basis. Diets were offered ad libitum for a 28 d adaptation period and 95% ad libitum for a 4 d collection …

Genomic Analysis Of Sow Reproductive Traits: Identification Of Selective Sweeps, Major Genes, And Genotype By Diet Interactions, Melanie D. Trenhaile

Department of Animal Science: Dissertations, Theses, and Student Research

Reproductive traits, such as litter size and reproductive longevity, are economically important. However, selection for these traits is difficult due to low heritability, polygenic nature, sex-limited expression, and expression late in life. Marker-assisted selection may provide an alternative to increase genetic progress.

Nebraska Index Line (NIL) has been selected for litter size related traits since 1981. It is one of the main contributing lines to the UNL reproductive longevity resource population (n > 1,500), which was genotyped for 60,000 SNPs, phenotyped for age at puberty (AP), lifetime number of parities (LTNP), litter size traits, and other reproductive traits, and fed either …

Occupancy Analysis And Density Estimation Of Kori Bustards (Ardeotis Kori) And Helmeted Guineafowl (Numida Meleagris) For Use In Landscape Conservation Planning In The Northern Tuli Game Reserve, Botswana, Kathryn R. Mccollum

School of Natural Resources: Dissertations, Theses, and Student Research

For understudied species, more informed conservation planning and decision-making on both the local and landscape levels may be attained through the use of occupancy and abundance estimations. Here, we focus on two iconic bird species in eastern Botswana, kori bustards (Ardeotis kori) and helmeted guineafowl (Numida meleagris). The overall goal of this project was to better understand the hierarchy of factors that influence occupancy (ψ) and density of kori bustard and helmeted guineafowl populations within the Northern Tuli Game Reserve and how these factors may interact to affect landscape conservation and usage. We performed distance sampling …

Effects Of Wind Turbine Noise On Male Greater Prairie-Chicken Vocalizations And Chorus, Cara E. Whalen

School of Natural Resources: Dissertations, Theses, and Student Research

Wind energy facilities are constructed without full knowledge of their effects on birds, and the noise generated by wind turbines is a particular concern. I investigated the effects of wind turbine noise on male Greater Prairie-Chicken (Tympanuchus cupido pinnatus) vocalizations and chorus near Ainsworth, NE, USA in 2013 and 2014. I studied 14 leks located in the area surrounding a 36-turbine wind energy facility. I used two main approaches in this study. First, I recorded Greater Prairie-Chicken boom, cackle, whine, and whoop vocalizations at each of the study leks and measured the duration, sound pressure level, peak frequency, …

Culturally Speaking: Of Rotary Phones And Dairy Foods, Phillip Tong

Dairy Science

No abstract provided.

Partial Calcium Depletion During Membrane Filtration Affects Gelation Of Reconstituted Milk Protein Concentrates, H. Eshpari, R. Jiménez-Flores, P. S. Tong, M. Corredig

Dairy Science

Milk protein concentrate powders (MPC) with improved rehydration properties are often manufactured using processing steps, such as acidification and high-pressure processing, and with addition of other ingredients, such as sodium chloride, during their production. These steps are known to increase the amount of serum caseins or modify the mineral equilibrium, hence improving solubility of the retentates. The processing functionality of the micelles may be affected. The aim of this study was to investigate the effects of partial acidification by adding glucono-δ-lactone (GDL) to skim milk during membrane filtration on the structural changes of the casein micelles by observing their chymosin-induced …

Feeding A Brown Midrib Corn Silage-Based Diet To Growing Beef Steers Improves Growth Performance And Economic Returns, C. S. Saunders, S. Y. Yang, J.-S. Eun, D. M. Feuz, D. R. Zobell

Animal, Dairy, and Veterinary Science Faculty Publications

A feedlot experiment was performed to determine growth performance, ruminal fermentation characteristics, and economic returns for growing beef steers when fed a brown midrib corn silage-based total mixed ration (BMRT) compared with a conventional corn silage-based total mixed ration (CCST). Twenty-four Angus crossbred steers (initial body weight=258±23.2 kg) in individual pens were used in a completely randomized design (n=12). Intake of dry matter was not different between the treatments. Steers fed the BMRT tended to have greater average daily gain (1.54 vs. 1.42 kg d−1; P=0.09) and gain-to-feed ratio (0.165 vs. 0.146; P=0.07) compared with those fed the CCST. Feeding …

Autonomic Nervous System Reactivity In A Free-Ranging Mammal: Effects Of Dominance Rank And Personality, Elodie F. Briefer, James A. Oxley, Alan G. Mcelligott

Ethology Collection

Modulation of the autonomic nervous system (ANS) activity allows animals to effectively respond to internal and external stimuli in everyday challenges via changes in, for example, heart and respiration rate. Various factors, ranging from social such as dominance rank to internal such as personality or affective states can impact animal physiology. Our knowledge of the combinatory effects of social and internal factors on ANS basal activity and reactivity, and of the importance that each factor has in determining physiological parameters, is limited, particularly in nonhuman, free-ranging animals. In this study, we tested the effects of dominance rank and personality (assessed …

Influence Of Habitat And Intrinsic Characteristics On Survival Of Neonatal Pronghorn, Christopher N. Jacques, Jonathan A. Jenks, Troy W. Grovenburg, Robert Wayne Klaver

Natural Resource Management Faculty Publications

Increased understanding of the influence of habitat (e.g., composition, patch size) and intrinsic (e.g., age, birth mass) factors on survival of neonatal pronghorn (Antilocapra americana) is a prerequisite to successful management programs, particularly as they relate to population dynamics and the role of population models in adaptive species management. Nevertheless, few studies have presented empirical data quantifying the influence of habitat variables on survival of neonatal pronghorn. During 2002–2005, we captured and radiocollared 116 neonates across two sites in western South Dakota. We documented 31 deaths during our study, of which coyote (Canis latrans) predation (n = 15) was the …

Avs Corner, December 2015, Casey Wheeler, Emily Cook, Alexandra Johnson, Jamison Lynch, Kim Hill, Hayley Boyd, April Jeffcoat, Johanna Johnson

AVS Corner

No abstract provided.

Landings, Vol. 23, No. 12, Maine Lobstermen’S Community Alliance

Landings: News & Views from Maine's Lobstering Community

Landings content emphasizes science, history, resource sustainability, economic development, and human interest stories related to

Maine’s lobster industry. The newsletter emphasizes lobstering as a traditional, majority-European American lifeway with an economic and social heritage unique to the coast of Maine. The publication focuses how ongoing research to engage in sustainable, non-harmful, and non-wasteful commercial fishing practices benefit both the fishery and Maine's coastal legacy.

Maine Lobstermen’s Community Alliance (MLCA) started publication of Landings, a 24-page newsletter in January 2013 as the successor of the Maine Lobstermen’s Association (MLA) Newsletter. As of 2022, the MLCA published over 6,500 copies of …

South Sioux City Fall Field Days, Janis Paseka

Nebraska Bird Review

The 2015 NOU Fall Field Days took place in South Sioux City at the Americas Best Value Inn on Sept. 25–27. There were about 50 in attendance at the meeting, which was organized by Dave Heidt, Robin Harding, Jan Johnson, and Betty Grenon.

On Friday evening Ponca State Park Superintendent Jeff Fields told the group about the changes that have happened in Ponca State Park since its beginning in 1934 as a Civilian Conservation Corps camp. It is the third oldest state park in Nebraska and now encompasses 2,400 acres. It boasts one of the oldest bur oaks in the …

2015 Fall Migration Bird Banding At Wildcat Hills State Recreation Area, Holly Garrod

Nebraska Bird Review

It was a different season of bird banding this year at Wildcat Hills State Recreation Area in Scotts Bluff County, Nebraska. Due to construction at the nature center, the banding station was moved farther down the road to one of the picnic shelters. The habitat remained mostly the same, with Ponderosa Pine and multispecies-shrub understory dominating the unique ridge landscape characteristic of Wildcat Hills. The new site provided more shrub understory but lacked the running water of Turkey Creek and the bird feeders at the nature center. Bird Conservatory of the Rockies (formerly Rocky Mountain Bird Observatory) has been banding …

Fall Field Report, August–November 2015, W. Ross Silcock

Nebraska Bird Review

To start, a housekeeping item: in the species accounts that follow, whenever I use the term "migrant" I am referring to fall migration only. Many species, of course, have differing migration strategies and timing in spring and fall.

Much of the data used in this report relating to western and Pine Ridge passerines comes from the outstanding banding efforts by Bird Conservancy of the Rockies (formerly Rocky Mountains Bird Observatory) at Chadron State Park (CSP) and Wildcat Hills Nature Center (WHNC) in Scotts Bluff Co. This year’s operators were Josh Lefever and Holly Garrod. Related to the Chadron State Park …

Subscription And Organization Information [December 2015]

Nebraska Bird Review

The Nebraska Bird Review is published quarterly by the Nebraska Ornithologists' Union, Inc., as its official journal, and is sent to members not in arrears of dues. Annual subscription rates (on a calendar-year basis only): $25 in the United States and $35 in all other countries, payable in advance. Single copies are $7 each, postpaid, in the United States and $9 elsewhere. Send orders for back issues to Anita Breckbill, NOU Librarian, c/o Music Library, WMB 30, University of Nebraska, Lincoln, NE 68588-0101.

Memberships in the NOU (on a calendar-year basis only): Active Household (one or more people) $25; Sustaining …

Nebraska Bird Review (December 2015) 83(4), Whole Issue

Nebraska Bird Review

Fall Field Report, August–November 2015 ... 154

2015 Fall Migration Bird Banding at Wildcat Hills State Recreation Area … 183

South Sioux City Fall Field Days ... 186

Index to Volume 83 … 192

Subscription and Organization Information ... 207

Index To Volume 83

Nebraska Bird Review

Aird, Bruce 156
Akers, Danny 135
Allen, Edward 5, 49, 56, 144, 157
Anderbery, DeAnna 49
Anderson: Branden 50; Kapri 50
Armknecht, Henry 5
Arp, Dennis 56
Arthur, Noah 5, 49, 57, 135, 158
Arterburn, S. W. 148
Aubushon: Cathy 49; Dorothy 49
Avocet, American 65, 88, 112, 164
Azar, Adrian 104

. . .

Yellowlegs: Greater 11, 65, 88, 112, 165, 186, 188; Lesser 11, 24, 66, 88, 112, 165, 186, 188
Yellowthroat, Common 79, 91, 121, 177, 190

Zambon, Teri 6
Zonotrichia/eucophrys: gambelii 180; leucophrys 82, 180; oriantha 82: leucophrys × oriantha 82
Zwartjes, William 106

Heat Dissipation During Hovering And Forward Flight In Hummingbirds, Don Powers, Bret W. Tobalske, J. Keaton Wilson, Keeley R. Corder

Faculty Publications - Department of Biological & Molecular Science

Flying animals generate large amounts of heat, which must be dissipated to avoid overheating. In birds, heat dissipation is complicated by feathers, which cover most body surfaces and retard heat loss. To understand how birds manage heat budgets during flight, it is critical to know how heat moves from the skin to the external environment. Hummingbirds are instructive because they fly at speeds from 0 to more than 12ms−1, during which they transit from radiative to convective heat loss. We used infrared thermography and particle image velocimetry to test the effects of flight speed on heat loss from specific body …