Life Sciences Commons^™

Different Levels Of Single-Strain Probiotic (Bacillus Subtilis) With Proteolytic Enzyme (Serratiopeptidase) Can Be Used As An Alternative To Antibiotic Growth Promoters In Broiler, Muhammad Mushtaq, Baseerat Ali, Majid Ali, Neelam Bibi, Rabin Raut, Gamaleldin M. Suliman, Ayman A. Swelum

Agricultural and Environmental Sciences Faculty Research

In the current study, the proteolytic enzyme (serratiopeptidase) was used to enhance the efficacy of Bacillus subtilis (B. subtilis) probiotic as a growth promotor in broiler chicken. The effects of serratiopeptidase on the efficacy of different levels of B. subtilis as a growth promotor in broiler chicks were evaluated regarding growth performance traits, villus histomorphometric characterization, and intestinal microbiota count. Day-old broiler chicks (n = 120) were allocated into 4 groups having 3 replicates/group. In the control group (C), the basal diet was kept without supplementation. In treatment groups (P100, P150, and P200), the basal diet was supplemented with 100, …

Transcriptomic Analysis Of Liver Indicates Novel Vaccine To Porcine Reproductive And Respiratory Virus Promotes Homeostasis In T-Cell And Inflammatory Immune Responses Compared To A Commercial Vaccine In Pigs, Damarius S. Fleming, Laura C. Miller, Jiuyi Li, Albert Van Geelen, Yongming Sang

Agricultural and Environmental Sciences Faculty Research

One of the largest impediments for commercial swine production is the presence of Porcine Reproductive and Respiratory Syndrome Virus (PRRSV), a devastating RNA viral infection that is responsible for over $1 billion in loss in the U.S. annually. The challenge with combating PRRSV is a combination of the effect of an extraordinary rate of mutation, the ability to infect macrophages, and subversion of host immune response through a series of actions leading to both immunomodulation and immune evasion. Currently there are a handful of commercial vaccines on the market that have been shown to be effective against homologous infections, but …

Evaluation Of Selected Bacteria And Yeast For Probiotic Potential In Poultry Production, Beverly Dixon, Agnes Kilonzo-Nthenge, Maureen Nzomo, Sarayu Bhogoju, Samuel Nahashon

Agricultural and Environmental Sciences Faculty Research

Performance and efficiency of feed utilization in poultry is highly influenced by gut health, which is dependent on intestinal microbial balance. Probiotics are live microbial feed supplements or viable microorganisms that beneficially affect the host animal by improving its gastrointestinal tract (GIT) microbial balance. However, their mode of action and suitable GIT environment favoring their colonization of the GIT is obscure. The probiotic properties of Lactobacillus plantarum, Bifidobacterium longum, and Saccharomyces boulardii were evaluated. These microbes were tested in vitro against gastrointestinal conditions for survivability and their ability to attach to the intestinal mucosa. The ability of the microbes to …

Recent Advances In Probiotic Application In Animal Health And Nutrition: A Review, Sarayu Bhogoju, Samuel Nahashon

Agricultural and Environmental Sciences Faculty Research

Biotechnological advances in animal health and nutrition continue to play a significant role in the improvement of animal health, growth, and production performance. These biotechnological advancements, especially the use of direct-fed microbials, also termed probiotics, those genetically modified and otherwise, have minimized many challenges facing livestock production around the world. Such advancements result in healthy animals and animal products, such as meat, for a growing population worldwide. Increasing demand for productivity, healthy animals, and consumer food safety concerns, especially those emanating from excessive use of antibiotics or growth promoters, are a driving force for investing in safer alternatives, such as …

Harness Organoid Models For Virological Studies In Animals: A Cross-Species Perspective, Yongming Sang, Laura C. Miller, Rahul K. Nelli, Luis Gabriel Giménez-Lirola

Agricultural and Environmental Sciences Faculty Research

Animal models and cell culture in vitro are primarily used in virus and antiviral immune research. Whereas the limitation of these models to recapitulate the viral pathogenesis in humans has been made well aware, it is imperative to introduce more efficient systems to validate emerging viruses in both domestic and wild animals. Organoids ascribe to representative miniatures of organs (i.e., mini-organs), which are derived from three-dimensional culture of stem cells under respective differential conditions mimicking endogenous organogenetic niches. Organoids have broadened virological studies in the human context, particularly in recent uses for COVID19 research. This review examines the status and …

Effects Of Lactobacillus Reuteri And Streptomyces Coelicolor On Growth Performance Of Broiler Chickens, Sarayu Bhogoju, Collins N. Khwatenge, Thyneice Taylor-Bowden, Gabriel Oluwamuyiwa Akerele, Boniface M. Kimathi, Joseph Donkor, Samuel N. Nahashon

Agricultural and Environmental Sciences Faculty Research

There are well documented complications associated with the continuous use of antibiotics in the poultry industry. Over the past few decades, probiotics have emerged as viable alternatives to antibiotics; however, most of these candidate probiotic microorganisms have not been fully evaluated for their effectiveness as potential probiotics for poultry. Recent evaluation of a metagenome of broiler chickens in our laboratory revealed a prevalence of Lactobacillus reuteri (L. reuteri) and Actinobacteria class of bacteria in their gastrointestinal tract. In this study Lactobacillus reuteri and Streptomyces coelicolor (S. coelicolor) were selected as probiotic bacteria, encapsulated, and added into broiler feed at a …

Recent Advances In The Application Of Crispr/Cas9 Gene Editing System In Poultry Species, Collins N. Khwatenge, Samuel N. Nahashon

Agricultural and Environmental Sciences Faculty Research

CRISPR/Cas9 system genome editing is revolutionizing genetics research in a wide spectrum of animal models in the genetic era. Among these animals, is the poultry species. CRISPR technology is the newest and most advanced gene-editing tool that allows researchers to modify and alter gene functions for transcriptional regulation, gene targeting, epigenetic modification, gene therapy, and drug delivery in the animal genome. The applicability of the CRISPR/Cas9 system in gene editing and modification of genomes in the avian species is still emerging. Up to date, substantial progress in using CRISPR/Cas9 technology has been made in only two poultry species (chicken and …

Sensitivity Of Wild-Type And Rifampicin-Resistant O157 And Non-O157 Shiga Toxin-Producing Escherichia Coli To Elevated Hydrostatic Pressure And Lactic Acid In Ground Meat And Meat Homogenate, Abimbola Allison, Aliyar Cyrus Fouladkhah

Agricultural and Environmental Sciences Faculty Research

Various serogroups of Shiga toxin-producing Escherichia coli have been epidemiologically associated with foodborne disease episodes in the United States and around the globe, with E. coli O157: H7 as the dominant serogroup of public health concern. Serogroups other than O157 are currently associated with about 60% of Shiga toxin-producing E. coli related foodborne illness episodes. Current study evaluated sensitivity of the O157 and epidemiologically important non-O157 serogroups of the pathogen to elevated hydrostatic pressure and 1% lactic acid. Pressure intensity of 250 to 650 MPa were applied for 0 to 7 min for inactivation of strain mixtures of …

Probiotics And Antimicrobial Effect Of Lactiplantibacillus Plantarum, Saccharomyces Cerevisiae, And Bifidobacterium Longum Against Common Foodborne Pathogens In Poultry, Joy Igbafe, Agnes Kilonzo-Nthenge, Samuel N. Nahashon, Abdullah Ibn Mafiz, Maureen Nzomo

Agricultural and Environmental Sciences Faculty Research

The probiotic potential and antimicrobial activity of Lactiplantibacillus plantarum, Saccharomyces cerevisiae, and Bifidobacterium longum were investigated against Escherichia coli O157:H7, Salmonella typhimurium and Listeria monocytogenes. Selected strains were subjected to different acid levels (pH 2.5–6.0) and bile concentrations (1.0–3.0%). Strains were also evaluated for their antimicrobial activity by agar spot test. The potential probiotic strains tolerated pH 3.5 and above without statistically significant growth reduction. However, at pH 2.5, a significant (p < 0.05) growth reduction occurred after 1 h for L. plantarum (4.32 log CFU/mL) and B. longum (5.71 log CFU/mL). S. cerevisiae maintained steady cell counts for the entire treatment period without a statistically significant (p > 0.05) reduction (0.39 log CFU/mL). The results indicate at 3% bile concertation, 1.86 log CFU/mL reduction was observed for L. plantarum, while S. cerevisiae, and B. longum growth …

Transcriptome Analysis And Expression Of Selected Cationic Amino Acid Transporters In The Liver Of Broiler Chicken Fed Diets With Varying Concentrations Of Lysine, Collins N. Khwatenge, Boniface M. Kimathi, Samuel N. Nahashon

Agricultural and Environmental Sciences Faculty Research

Amino acids are known to play a key role in gene expression regulation. Amino acid signaling is mediated via two pathways: the mammalian target of rapamycin complex 1 (mTORC1) and the amino acid responsive (AAR) pathways. Cationic amino acid transporters (CATs) are crucial in these pathways due to their sensing, signaling and transport functions. The availability of certain amino acids plays a key role in the intake of other amino acids, hence affecting growth in young birds. However, the specific mechanism for regulating lysine transport for growth is not clear. In this study, we analyze the transcriptome profiles and mRNA …

Porcine Cytokines, Chemokines And Growth Factors: 2019 Update, Harry D. Dawson, Yongming Sang, Joan K. Lunney

Agricultural and Environmental Sciences Faculty Research

Pigs are a major food source worldwide as well as major biomedical models for human physiology and therapeutics. A thorough understanding of porcine immunity is essential to prevent and treat infectious diseases, and develop effective vaccines and therapeutics. The use of pigs as biomedical models is dependent on the growing molecular and immune toolbox. This paper summarizes current knowledge of swine cytokines, chemokines and growth factors, identifying 289 pig proteins, characterizing knowledge of their gene structures and families. It identifies areas in the current swine genome build that need to be clarified. A broad-based literature and vendor search was conducted …

Investigating Bat Activity In Various Agricultural Landscapes In Northeastern United States, Katherine Harms, Emmanuel Omondi, Atanu Mukherjee

Agricultural and Environmental Sciences Faculty Research

Bats are estimated to provide between $3.7 and $53 billion annually in ecosystem services in the U.S.A. Determining how bats use land for foraging is important in planning agricultural landscapes to increase their presence and role in insect pest control. A research project was established in 2016 and 2017 to determine bat populations and activity differences between different land use management systems. Bat activity was monitored in 10 conventionally and organically managed systems in the presence of, and at a distance from the tree line. Two acoustic monitoring devices were used to record ultrasonic echolocation calls of bats. Organic systems …

Evaluation Of Severity And Factors Contributing To Foot Lesions In Endangered Ozark Hellbenders, Cryptobranchus Alleganiensis Bishopi, Rebecca H. Hardman, Kelly J. Irwin, William B. Sutton, Debra L. Miller

Agricultural and Environmental Sciences Faculty Research

Arkansas populations of Ozark Hellbenders, Cryptobranchus alleganiensis bishopi have declined precipitously over the past few decades and are now limited to a single river. Biologists have also observed an increase of distal limb lesions with unidentified etiology and unknown role in morbidity and mortality of the species in this location. We documented lesions and collected associated individual size class data and pathogen samples in Ozark Hellbenders of Arkansas (n = 73) from 2011 to 2014 with the following two objectives: (1) document spatiotemporal patterns and severity of lesions present in this last remaining Arkansas Ozark Hellbender population, and (2) determine …

Xenopus Interferon Complex: Inscribing The Amphibiotic Adaption And Species-Specific Pathogenic Pressure In Vertebrate Evolution?, Yun Tian, Jordan Jennings, Yuanying Gong, Yongming Sang

Agricultural and Environmental Sciences Faculty Research

Several recent studies have revealed previously unknown complexity of the amphibian interferon (IFN) system. Being unique in vertebrate animals, amphibians not only conserve and multiply the fish-like intron-containing IFN genes, but also rapidly evolve amniote-like intronless IFN genes in each tested species. We postulate that the amphibian IFN system confers an essential model to study vertebrate immune evolution in molecular and functional diversity to cope with unprecedented pathophysiological requirement during terrestrial adaption. Studies so far have ascribed a potential role of these IFNs in immune regulation against intracellular pathogens, particularly viruses; however, many knowledge gaps remain elusive. Based on recent …

Expression Of Lysine-Mediated Neuropeptide Hormones Controlling Satiety And Appetite In Broiler Chickens, Collins N. Khwatenge, Boniface M. Kimathi, Thyneice Taylor-Bowden, Samuel N. Nahashon

Agricultural and Environmental Sciences Faculty Research

Lysine is the second most limiting amino acid after methionine and is considered the most limiting amino acid for growth in poultry. Lysine requirement for broiler chickens has changed over the years. Leptin and adiponectin represent 2 adipokines that mediate metabolism by eliciting satiety effects whereas ghrelin peptide hormone influences appetite. We hypothesize that this affects growth performance of chicks. This study evaluates the effect of varying dietary lysine homeostasis on performance of broiler chickens through satiety- and appetite-mediating hormones. In 3 replications, 270 one-day-old chicks were reared for 8 wk feeding on diets comprising 0.85, 1.14, and 1.42% lysine …

Laying Performance Of Pearl Gray Guinea Fowl Hens As Affected By Caging Density, Samuel N. Nahashon, Nathaniel Adefope, Abravi Amenyenu, D. Wright

Agricultural and Environmental Sciences Faculty Research

The caging density required for optimal egg production by various avian species and varieties is highly variable. Even so, little is known of the required cage density for optimum performance of the laying guinea fowl (Numida meleagris). The objective of this study was to assess the effect of varying cage densities on production performance of pearl gray guinea fowl laying hens. In 3 replicates, 270 pearl gray guinea hens [28 wk of age (WOA)] were weighed individually and randomly assigned to laying cages at densities of 1, 2, and 3 birds/cage, equivalent to 1,394, 697, and 465 cm2/bird, respectively. During …

Effect Of Varying Dietary Concentrations Of Lysine On Growth Performance Of The Pearl Grey Guinea Fowl, Sarayu Bhogoju, Samuel N. Nahashon, Joseph Donkor, Boniface M. Kimathi, Dekarra Johnson, Collins N. Khwatenge, Thyneice Taylor-Bowden

Agricultural and Environmental Sciences Faculty Research

Lysine is the second limiting essential amino acid in poultry nutrition after methionine. Understanding the lysine requirement of poultry is necessary in guiding formulation of least cost diets that effectively meet the nutritional needs of individual birds. The lysine requirement of the Pearl Grey guinea fowl (PGGF) is not known. Therefore, the objective of this study was to assess the appropriate lysine levels required for optimal growth attributes of the PGGF. In a 12-week study, 512 one-day-old Pearl Grey guinea keets were weighed individually and randomly assigned to electrically heated battery brooders. Each battery contained 12 compartments housing 15 birds …

Effects Of Dietary Metabolizable Energy And Crude Protein Concentrations On Growth Performance And Carcass Characteristics Of French Guinea Broilers, Samuel N. Nahashon, Nathaniel Adefope, Abravi Amenyenu, D. Wright

Agricultural and Environmental Sciences Faculty Research

This study was undertaken to assess dietary CP and ME concentrations for optimum growth performance and carcass characteristics of French guinea broilers. In a 3 x 3 factorial arrangement, 396 1-d-old French guinea keets were randomly assigned to experimental diets with 3,050, 3,100, and 3,150 kcal of ME/kg of diet; each contained 21, 23, and 25% CP, respectively, from 0 to 4 wk of age (WOA). From 5 to 8 WOA, experimental diets had 3,100, 3,150, and 3,200 kcal of ME/kg of diet, and each contained 19, 21, and 23% CP, respectively. Each dietary treatment was replicated 3 times, and …

Growth Characteristics Of Pearl Gray Guinea Fowl As Predicted By The Richards, Gompertz, And Logistic Models, Samuel N. Nahashon, Sammy E. Aggrey, Nathaniel Adefope, Abravi Amenyenu, D. Wright

Agricultural and Environmental Sciences Faculty Research

This study was undertaken to describe the growth pattern of the pearl gray Guinea fowl. Using BW data from hatch to 22 wk, 3 nonlinear mathematical functions (Richards, Gompertz, and logistic) were used to estimate growth patterns of the pearl gray guinea fowl. The logistic and Gompertz models are a special case of the Richards model, which has a variable point of inflection defined by the shape or growth trajectory parameter, m. The shape parameter m was 1.08 and 0.98 in males and females, respectively, suggesting that the growth pattern of the pearl gray female guinea fowl is Gompertz. The …

Influence Of Crossbreeding On Meat Goat Doe Fitness When Comparing Boer F1 With Base Breeds In The Southeastern United States, Piush Khanal, Maria L. Leite-Browning, Richard Browning Jr.

Agricultural and Environmental Sciences Faculty Research

Understanding fitness level among various breeds is essential for sustainable meat goat production. Research on the relative fitness of Boer F₁ does and straightbred base breed has been limited. Meat goat does of various genotypes (Boer, Kiko, Spanish, Boer × Kiko reciprocal F₁ crosses, and Boer × Spanish reciprocal F₁ crosses) were studied to evaluate breed effects on doe fitness traits and the expression of heterosis over 7 production years. The herd was semi-intensively managed under humid subtropical pasture. Doe age affected (P < 0.05) various traits. Boer × Kiko does were heavier (P < 0.05) than Boer does at fall breeding, but Boer × Spanish does did not differ (P > 0.05) from Boer does for breeding weight. The body weights of …

A Comparative Analysis Of Microbial Profile Of Guinea Fowl And Chicken Using Metagenomic Approach, Sarayu Bhogoju, Samuel N. Nahashon, Xiaofei Wang, Carl E. Darris, Agnes Kilonzo-Nthenge

Agricultural and Environmental Sciences Faculty Research

Probiotics are live microbial feed supplements that promote growth and health to the host by minimizing non-essential and pathogenic microorganisms in the host’s gastrointestinal tract (GIT). The campaign to minimize excessive use of antibiotics in poultry production has necessitated development of probiotics with broad application in multiple poultry species. Design of such probiotics requires understanding of the diversity or similarity in microbial profiles among avian species of economic importance. Therefore, the objective of this research was to establish and compare the microbial profiles of the GIT of Guinea fowl and chicken and to establish the microbial diversity or similarity between …

Effect Of Aloe Vera And Vitamin E Supplementation On The Immune Response Of Broilers, Babak Darabighane, Ali Mahdavi, Farzad Mirzaei Aghjehgheshlagh, Abolfazl Zarei, Eleni Kasapidou, Samuel N. Nahashon

Agricultural and Environmental Sciences Faculty Research

Background: herbs are among the feed supplements under investigation that could replace antibiotics to improve humoral and cellular immune response in birds. Objective: this study evaluated the potential of Aloe vera (Aloe barbadensis Miller) and vitamin E as immunostimulants on humoral and cellular immune responses in broilers. Methods: broilers were randomly assigned to three dietary treatments: a negative control (basal diet + with no additive), basal diet + 1% Aloe vera gel in drinking water, and basal diet + 100 mg/Kg vitamin E in the feed. Antibody titers against sheep red blood cells and Newcastle disease virus were used …

Relative Growth Of Carcass Tissues Of Goat Kids From Five Breed Types Finished On Pasture Or Feedlot, Raquel Vasconcelos Lourençon, Heraldo Cesar Gonçalves, Paulo Roberto De Lima Meirelles, Richard Browning Jr., Maria Lenira Leite-Browning, Andréia Cristina Toniolo Chávari, Raquel Ornelas Marques, Gil Ignacio Lara Canizares, Natalia Santos Leal, Helen Fernanda Barros Gomes

Agricultural and Environmental Sciences Faculty Research

he aim of this study was to evaluate the effect of cross breeding, finishing system, and gender on the relative growth of carcass tissues of dairy kids. Seventy eight kids (39 male and 39 female) from five breed types were used: Alpine; ½ Boer + ½ Alpine (½ BA); ½ Nubian + ½ Alpine (½ ANA); ¾ Boer + ¼ Alpine (¾ BA); and ½ Nubian + ¼ Boer + ¼ Alpine (TC). Kids were distributed into two finishing systems: in pasture with doe (FS1) and weaned in feedlot (FS2). Kids were slaughtered at a mean age of 128.4 ± …

Molecular Tools To Support Metabolic And Immune Function Research In The Guinea Fowl (Numida Meleagris), Carl E. Darris, James E. Tyus Ii, Gary Kelley, Alexander J. Ropelewski, Hugh B. Nicholas Jr., Xiaofei Wang, Samuel N. Nahashon

Agricultural and Environmental Sciences Faculty Research

Background

Guinea fowl (Numidia meleagris) production as an alternative source of meat and poultry has shown potential for economic viability. However, there has been little progress in characterizing the transcriptome of the guinea fowl. In this study RNA-sequencing and de novo transcriptome assembly of several Guinea fowl tissues (pancreas, hypothalamus, liver, bone marrow and bursa) which play key roles in regulating feed intake, satiety, and immune function was performed using Illumina’s Hi-Seq 2000.

Results

74 million sequences were generated and assembled into 96,492 contigs using the Trinity software suite. Over 39,000 of these transcripts were found to have …

A Review On Effects Of Aloe Vera As A Feed Additive In Broiler Chicken Diets, Darabighane Babak, Samuel N. Nahashon

Agricultural and Environmental Sciences Faculty Research

Prohibition of application of antibiotic growth promoters in broiler chicken diets has resulted in increased use of herbs as natural additives in broiler feeds over the recent years. Researchers particularly look for herbs that can affect such parameters as growth performance, immune response, or treatment of certain diseases. Aloe vera is a well-known herb characterized by properties such as anti-bacterial, anti-viral, anti-fungal, anti-tumor, anti-inflammatory, immunomodulatory, wound-healing, anti-oxidant, and anti-diabetic effects. During the past years, attention has shifted toward Aloe vera as a natural additive to broiler diets, and studies have shown that Aloe vera can improve immune response and growth …

Evaluation Of Drug-Resistant Enterobacteriaceae In Retail Poultry And Beef, Agnes Kilonzo-Nthenge, Emily Rotich, Samuel N. Nahashon

Agricultural and Environmental Sciences Faculty Research

There has been increasing concern on the emergence of multidrug-resistant foodborne pathogens from foods of animal origin, including poultry. The current study aimed to evaluate antibiotic-resistant Enterobacteriaceae from raw retail chicken/turkey parts (thigh, wings, breast, and ground) and beef meat (ground and chunks) in Middle Tennessee. Resistance of the collected Enterobacteriaceae to a panel of antibiotics was determined by the Kirby-Bauer disk diffusion test. Retail meats were also assayed for the presence of Salmonella spp. and Escherichia coli O157:H7. Two hundred thirty-seven samples representing 95.2% of the total of 249 samples tested were positive for Enterobacteriaceae. The level of contamination …

Growth Performance And Carcass Characteristics Of Guinea Fowl Broilers Fed Micronized-Dehulled Pea (Pisum Sativum L.) As A Substitute For Soybean Meal, Vito Laudadio, Samuel N. Nahashon, ‪Vincenzo Tufarelli

Agricultural and Environmental Sciences Faculty Research

This study was conducted to evaluate the effect of substitution of soybean meal (SBM) with dehulled-micronized peas (Pisum sativum) in diets of guinea fowl broilers on their growth performance, carcass yields, and fatty acid composition of meat. One hundred forty 1-d-old guinea fowl keets were randomly assigned to 2 dietary treatments, which were fed from hatch to 12 wk. The birds were fed 2 wheat middling-based diets comprising a control diet, which contained SBM (78 g/kg) and a test diet containing dehulled-micronized peas (180 g/kg) as the main protein source. The substitution of SBM with peas had no adverse effect …

Comparison Of Boer, Kiko, And Spanish Meat Goat Does For Stayability And Cumulative Reproductive Output In The Humid Subtropical Southeastern United States, Ashley N. Pellerin, Richard Browning Jr.

Agricultural and Environmental Sciences Faculty Research

Background: Longevity is the amount of time breeding females stay active in a herd by avoiding death or culling because of illness or reproductive failure. This is a trait of economic relevance in commercial small ruminant breeding herds as it affects lifetime reproductive output. The purpose of this study was to determine if breed of meat goat influences breeding doe survival rates and cumulative reproductive performance under semi-intensive management. Results: Boer (n = 132), Kiko (n = 92) and Spanish (n = 79) does were evaluated for longevity trends and cumulative kid production. The herd was managed on humid subtropical …

Effect Of Floor Density On Growth Performance Of Pearl Grey Guinea Fowl Replacement Pullets, Samuel N. Nahashon, Nathaniel Adefope, D. Wright

Agricultural and Environmental Sciences Faculty Research

Little is known of the optimal floor density for the Pearl Grey (PG) guinea fowl pullet. Hence, the objective of this study was to determine the effect of varying floor density on the growth performance of PG guinea fowl pullets. In 3 replicates, 1-d-old guinea keets (n = 786) were weighed individually and randomly assigned to floor pens covered with pine wood shavings at 80, 69, 60, and 53 birds/pen, equivalent to densities of 18, 15.6, 13.6, and 12 birds/m2, respectively. The birds were allowed feeder space of 2.3, 2.7, 3.1, and 3.5 cm/bird, respectively, and water space of 1.2, …

An Initial Map Of Chromosomal Segmental Copy Number Variations In The Chicken, Xiaofei Wang, Samuel N. Nahashon, Tromondae K. Feaster, Ann L. Bohannon-Stewart, Nathaniel Adefope

Agricultural and Environmental Sciences Faculty Research

Background

Chromosomal segmental copy number variation (CNV) has been recently recognized as a very important source of genetic variability. Some CNV loci involve genes or conserved regulatory elements. Compelling evidence indicates that CNVs impact genome functions. The chicken is a very important farm animal species which has also served as a model for biological and biomedical research for hundreds of years. A map of CNVs in chickens could facilitate the identification of chromosomal regions that segregate for important agricultural and disease phenotypes.

Results

Ninety six CNVs were identified in three lines of chickens (Cornish Rock broiler, Leghorn and Rhode Island …