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Full-Text Articles in Engineering

Deep Learning Predicts Ebv Status In Gastric Cancer Based On Spatial Patterns Of Lymphocyte Infiltration, Baoyi Zhang, Kevin Yao, Min Xu, Jia Wu, Chao Cheng Nov 2021

Deep Learning Predicts Ebv Status In Gastric Cancer Based On Spatial Patterns Of Lymphocyte Infiltration, Baoyi Zhang, Kevin Yao, Min Xu, Jia Wu, Chao Cheng

Computer Vision Faculty Publications

EBV infection occurs in around 10% of gastric cancer cases and represents a distinct subtype, characterized by a unique mutation profile, hypermethylation, and overexpression of PD-L1. Moreover, EBV positive gastric cancer tends to have higher immune infiltration and a better prognosis. EBV infection status in gastric cancer is most commonly determined using PCR and in situ hybridization, but such a method requires good nucleic acid preservation. Detection of EBV status with histopathology images may complement PCR and in situ hybridization as a first step of EBV infection assessment. Here, we developed a deep learning-based algorithm to directly predict EBV infection …


Computer-Aided Diagnosis Of Low Grade Endometrial Stromal Sarcoma (Lgess), Xinxin Yang, Mark Stamp Sep 2021

Computer-Aided Diagnosis Of Low Grade Endometrial Stromal Sarcoma (Lgess), Xinxin Yang, Mark Stamp

Faculty Research, Scholarly, and Creative Activity

Low grade endometrial stromal sarcoma (LGESS) accounts for about 0.2% of all uterine cancer cases. Approximately 75% of LGESS patients are initially misdiagnosed with leiomyoma, which is a type of benign tumor, also known as fibroids. In this research, uterine tissue biopsy images of potential LGESS patients are preprocessed using segmentation and stain normalization algorithms. We then apply a variety of classic machine learning and advanced deep learning models to classify tissue images as either benign or cancerous. For the classic techniques considered, the highest classification accuracy we attain is about 0.85, while our best deep learning model achieves an …


Step-Wise Deep Learning Models For Solving Routing Problems, Liang Xin, Wen Song, Zhiguang Cao, Jie Zhang Jul 2021

Step-Wise Deep Learning Models For Solving Routing Problems, Liang Xin, Wen Song, Zhiguang Cao, Jie Zhang

Research Collection School Of Computing and Information Systems

Routing problems are very important in intelligent transportation systems. Recently, a number of deep learning-based methods are proposed to automatically learn construction heuristics for solving routing problems. However, these methods do not completely follow Bellman's Principle of Optimality since the visited nodes during construction are still included in the following subtasks, resulting in suboptimal policies. In this article, we propose a novel step-wise scheme which explicitly removes the visited nodes in each node selection step. We apply this scheme to two representative deep models for routing problems, pointer network and transformer attention model (TAM), and significantly improve the performance of …


Flying Free: A Research Overview Of Deep Learning In Drone Navigation Autonomy, Thomas Lee, Susan Mckeever, Jane Courtney Jun 2021

Flying Free: A Research Overview Of Deep Learning In Drone Navigation Autonomy, Thomas Lee, Susan Mckeever, Jane Courtney

Articles

With the rise of Deep Learning approaches in computer vision applications, significant strides have been made towards vehicular autonomy. Research activity in autonomous drone navigation has increased rapidly in the past five years, and drones are moving fast towards the ultimate goal of near-complete autonomy. However, while much work in the area focuses on specific tasks in drone navigation, the contribution to the overall goal of autonomy is often not assessed, and a comprehensive overview is needed. In this work, a taxonomy of drone navigation autonomy is established by mapping the definitions of vehicular autonomy levels, as defined by the …


Bibliometric Analysis Of Named Entity Recognition For Chemoinformatics And Biomedical Information Extraction Of Ovarian Cancer, Vijayshri Khedkar, Charlotte Fernandes, Devshi Desai, Mansi R, Gurunath Chavan Dr, Sonali Tidke Dr., M. Karthikeyan Dr. Apr 2021

Bibliometric Analysis Of Named Entity Recognition For Chemoinformatics And Biomedical Information Extraction Of Ovarian Cancer, Vijayshri Khedkar, Charlotte Fernandes, Devshi Desai, Mansi R, Gurunath Chavan Dr, Sonali Tidke Dr., M. Karthikeyan Dr.

Library Philosophy and Practice (e-journal)

With the massive amount of data that has been generated in the form of unstructured text documents, Biomedical Named Entity Recognition (BioNER) is becoming increasingly important in the field of biomedical research. Since currently there does not exist any automatic archiving of the obtained results, a lot of this information remains hidden in the textual details and is not easily accessible for further analysis. Hence, text mining methods and natural language processing techniques are used for the extraction of information from such publications.Named entity recognition, is a subtask that comes under information extraction that focuses on finding and categorizing specific …


On-Device Deep Learning Inference For System-On-Chip (Soc) Architectures, Tom Springer, Elia Eiroa-Lledo, Elizabeth Stevens, Erik Linstead Mar 2021

On-Device Deep Learning Inference For System-On-Chip (Soc) Architectures, Tom Springer, Elia Eiroa-Lledo, Elizabeth Stevens, Erik Linstead

Engineering Faculty Articles and Research

As machine learning becomes ubiquitous, the need to deploy models on real-time, embedded systems will become increasingly critical. This is especially true for deep learning solutions, whose large models pose interesting challenges for target architectures at the “edge” that are resource-constrained. The realization of machine learning, and deep learning, is being driven by the availability of specialized hardware, such as system-on-chip solutions, which provide some alleviation of constraints. Equally important, however, are the operating systems that run on this hardware, and specifically the ability to leverage commercial real-time operating systems which, unlike general purpose operating systems such as Linux, can …


Wg2An: Synthetic Wound Image Generation Using Generative Adversarial Network, Salih Sarp, Murat Kuzlu, Emmanuel Wilson, Ozgur Guler Mar 2021

Wg2An: Synthetic Wound Image Generation Using Generative Adversarial Network, Salih Sarp, Murat Kuzlu, Emmanuel Wilson, Ozgur Guler

Engineering Technology Faculty Publications

In part due to its ability to mimic any data distribution, Generative Adversarial Network (GAN) algorithms have been successfully applied to many applications, such as data augmentation, text-to-image translation, image-to-image translation, and image inpainting. Learning from data without crafting loss functions for each application provides broader applicability of the GAN algorithm. Medical image synthesis is also another field that the GAN algorithm has great potential to assist clinician training. This paper proposes a synthetic wound image generation model based on GAN architecture to increase the quality of clinical training. The proposed model is trained on chronic wound datasets with various …


Converting Optical Videos To Infrared Videos Using Attention Gan And Its Impact On Target Detection And Classification Performance, Mohammad Shahab Uddin, Reshad Hoque, Kazi Aminul Islam, Chiman Kwan, David Gribben, Jiang Li Jan 2021

Converting Optical Videos To Infrared Videos Using Attention Gan And Its Impact On Target Detection And Classification Performance, Mohammad Shahab Uddin, Reshad Hoque, Kazi Aminul Islam, Chiman Kwan, David Gribben, Jiang Li

Electrical & Computer Engineering Faculty Publications

To apply powerful deep-learning-based algorithms for object detection and classification in infrared videos, it is necessary to have more training data in order to build high-performance models. However, in many surveillance applications, one can have a lot more optical videos than infrared videos. This lack of IR video datasets can be mitigated if optical-to-infrared video conversion is possible. In this paper, we present a new approach for converting optical videos to infrared videos using deep learning. The basic idea is to focus on target areas using attention generative adversarial network (attention GAN), which will preserve the fidelity of target areas. …


Evaluating The Performance Of Transformer Architecture Over Attention Architecture On Image Captioning, Deepti Balasubramaniam Jan 2021

Evaluating The Performance Of Transformer Architecture Over Attention Architecture On Image Captioning, Deepti Balasubramaniam

Dissertations

Over the last few decades computer vision and Natural Language processing has shown tremendous improvement in different tasks such as image captioning, video captioning, machine translation etc using deep learning models. However, there were not much researches related to image captioning based on transformers and how it outperforms other models that were implemented for image captioning. In this study will be designing a simple encoder-decoder model, attention model and transformer model for image captioning using Flickr8K dataset where will be discussing about the hyperparameters of the model, type of pre-trained model used and how long the model has been trained. …