Open Access. Powered by Scholars. Published by Universities.®
Articles 1 - 2 of 2
Full-Text Articles in Engineering
Rna Gene Finding With Biased Mutation Operators, Jennifer A. Smith
Rna Gene Finding With Biased Mutation Operators, Jennifer A. Smith
Electrical and Computer Engineering Faculty Publications and Presentations
The use of genetic algorithms for non-coding RNA gene finding has previously been investigated and found to be a potentially viable method for accelerating covariance-model-based database search relative to full dynamic-programming methods. The mutation operators in previous work chose new alignment insertion and deletion locations uniformly over the length of the model consensus sequence. Since the covariance models are estimated from multiple known members of a non-coding RNA family, information is available as to the likelihood of insertions or deletions at the individual model positions. This information is implicit in the state-transition parameters of the estimated covariance models. In the …
Evolvable Reconfigurable Hardware Framework For Edge Detection, Nader I. Rafla
Evolvable Reconfigurable Hardware Framework For Edge Detection, Nader I. Rafla
Electrical and Computer Engineering Faculty Publications and Presentations
Systems on Reconfigurable Chips contain rich resources of logic, memory, and processor cores on the same fabric. This platform is suitable for implementation of Evolvable Reconfigurable Hardware Architectures (ERHA). It is based on the idea of combining reconfigurable Field Programmable Gate Arrays (FPGA) along with genetic algorithms (GA) to perform the reconfiguration operation. This architecture is a suitable candidate for implementation of early-processing stage operators of image processing such as filtering and edge detection. However, there are still fundamental issues need to be solved regarding the on-chip reprogramming of the logic. This paper presents a framework for implementing an evolvable …