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Biochemical and Biomolecular Engineering

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2013

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Full-Text Articles in Engineering

Effects Of Biodiesel Concentration On Microbial Deterioration Of Polyethylene In A Simulated Fuel Storage Tank, Juan Manuel Restrepo-Florez Dec 2013

Effects Of Biodiesel Concentration On Microbial Deterioration Of Polyethylene In A Simulated Fuel Storage Tank, Juan Manuel Restrepo-Florez

Electronic Thesis and Dissertation Repository

In this study a simulated fuel storage tank was used to investigate the effect of biodiesel concentration on biodegradation of polyethylene. This research is relevant in the field of fuel storage. The simulated storage system consisted of a number of identical conical flasks. Each flask was comprised of two layers, an upper one consisting of a fuel blend of diesel with biodiesel in concentrations ranging from 0 to 100% of biodiesel and the bottom layer containing an aqueous mineral media inoculated with a community obtained from a real fuel storage facility. Polyethylene slabs cut to a specific size were immersed …


Characteristics Of Glass Ionomer Cements Composed Of Glass Powders In Cao-Sro-Zno-Sio2 System Prepared By Two Different Synthetic Routes, Ill Yong Kim, Chikara Ohtsuki, Aisling Coughlan, Lana Placek, Anthony W. Wren, Mark R. Towler Dec 2013

Characteristics Of Glass Ionomer Cements Composed Of Glass Powders In Cao-Sro-Zno-Sio2 System Prepared By Two Different Synthetic Routes, Ill Yong Kim, Chikara Ohtsuki, Aisling Coughlan, Lana Placek, Anthony W. Wren, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

Glass ionomer cements (GICs) are composed of an acid degradable glass, polyacrylic acid and water. Sol-gel processing to prepare the glass phase has certain advantages, such as the ability to employ lower synthesis temperatures than melt quenching and glasses that are reported to have higher purity. A previous study reported the effects of glass synthesis route on GIC fabrication. However, in that study, the sol-gel derived glass exhibited a reduced concentration of cations. This study investigates increasing the cation content of a sol-gel derived glass, 12CaO·4SrO·36ZnO·48SiO2 (molar ratio) by heating before aging to reduce dissolution of cations. This glass …


A Tale Of Two Protein Switches: Engineering, Characterizing, And Understanding A Novel And A Natural Switch, James Vincent Price Dec 2013

A Tale Of Two Protein Switches: Engineering, Characterizing, And Understanding A Novel And A Natural Switch, James Vincent Price

Doctoral Dissertations

Throughout nature, many proteins provide a specific function in response to some input signal (e.g., phosyphorylation, pH, etc.), a process that is oftentimes described as switching a protein “on” or “off.” The advent of protein engineering has allowed for the creation and understanding of chimeric proteins for uses in a number of applications such as therapeutics, biosensors and energy production. Two proteins, hemagglutinin (HA) of fowl plague influenza virus and a chimeric protein comprising a fusion between the LFA-1 I domain and the EF3 and EF4 hands of calmodulin, have been investigated in this dissertation. Both of these proteins undergo …


An Experimental And Computational Evaluation Of The Importance Of Molecular Diffusion In Gas Gravity Currents, Jeremy Jac Herman Dec 2013

An Experimental And Computational Evaluation Of The Importance Of Molecular Diffusion In Gas Gravity Currents, Jeremy Jac Herman

Graduate Theses and Dissertations

The accidental release of hazardous, denser-than-air gases during their transport or manufacture is a vital area of study for process safety researchers. This project examines the importance of molecular diffusion on the developing concentration field of a gas gravity current released into a calm environment. Questions which arose from the unexpectedly severe explosion in 2005 at Buncefield, England were of particular interest. The accidental overfilling of a large tank with gasoline on a completely calm morning led to a massive open air explosion. Forensic evidence showed that at the time of ignition, a vapor cloud, most of which now appears …


Reassessment Of Biowish Activation Procedure For Denitrification, William Wah Yee Dec 2013

Reassessment Of Biowish Activation Procedure For Denitrification, William Wah Yee

Master's Theses

BiOWiSHTM – Aqua is a blend of preserved multi-bacteria culture with the capability of denitrification. If an anaerobic nitrate rich activation procedure is used instead of the standard aerobic activation procedure, the denitrification rate is increased by 28 percent under the conditions of 30°C, 1C:1N, 200mg/L of carbon, and 200mg/L nitrogen.


Investigation Of Lysozyme Refolding Using Ionic Liquids As Refolding Additives, Harpreet Kaur Nov 2013

Investigation Of Lysozyme Refolding Using Ionic Liquids As Refolding Additives, Harpreet Kaur

Electronic Thesis and Dissertation Repository

A rapid and inexpensive method for the production of protein is crucial for the biopharmaceutical industry. The bottleneck in the case of genetically engineered systems lies in the recovery of active and properly refolded proteins from inclusion bodies. The correct refolding of a protein from its denatured state is dependent on several parameters including the concentration of the protein, the refolding buffers utilized, the approach employed and finally the type of refolding additives, if any, used in the process.

In this study, an emerging class of refolding additives, namely, ionic liquids were investigated for the refolding of denatured lysozyme protein. …


An Investigation Into The Structure And Properties Of Cao-Zno-Sio 2-Tio2-Na2o Bioactive Glass/Hydroxyapatite Composite, Chokchai Yatongchai, Mark R. Towler, Anthony W. Wren Nov 2013

An Investigation Into The Structure And Properties Of Cao-Zno-Sio 2-Tio2-Na2o Bioactive Glass/Hydroxyapatite Composite, Chokchai Yatongchai, Mark R. Towler, Anthony W. Wren

Chemical and Biochemical Engineering Faculty Research & Creative Works

Effect of the addition of CaO-ZnO-SiO2-TiO2-Na2O glass as a reinforcing phase on properties of hydroxyapatite/glass composites was investigated. The addition of the glass caused the decomposition of HA phase to tricalcium phosphate, inhibiting densification in the HA/glass composites. However, depending on the glass concentration, some of the glass can act as a sintering aid enhancing the densification in the composites. © 2013 IEEE.


Relating Ph And Ion Release From Ga2o3-Na 2o-Cao-Zno-Sio2 Bioactive Glasses, T. J. Keenan, A. W. Wren, A. Coughlan, Mark R. Towler, M. M. Hall Nov 2013

Relating Ph And Ion Release From Ga2o3-Na 2o-Cao-Zno-Sio2 Bioactive Glasses, T. J. Keenan, A. W. Wren, A. Coughlan, Mark R. Towler, M. M. Hall

Chemical and Biochemical Engineering Faculty Research & Creative Works

Three glasses were designed for this study, including one Ga-free glass (Control), and two Ga-containing glasses (TGa-1, TGa-2). In the Ga-containing glasses, Ga2O3 is included at the expense of ZnO. This study focuses on the relation between pH and ion concentration present in solution in which these bioactive glasses have been submerged for periods of 1, 7, and 14 days. © 2013 IEEE.


Biocompatibility Of Cao-Na2o-Sio2/Tio2 Glass Ceramic Scaffolds For Orthopaedic Applications, A. W. Wren, A. Coughlan, K. E. Smale, S. T. Misture, B. P. Mahon, O. M. Clarkin, Mark R. Towler Nov 2013

Biocompatibility Of Cao-Na2o-Sio2/Tio2 Glass Ceramic Scaffolds For Orthopaedic Applications, A. W. Wren, A. Coughlan, K. E. Smale, S. T. Misture, B. P. Mahon, O. M. Clarkin, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

This work aims to determine the effect of substituting TiO2 for SiO2 in a 0.62SiO2-Na2O-0.24CaO based glass-ceramic scaffold. High temperature X-ray Diffraction (HT-XRD) was used to determine the sintering temperature (700oC). Both optical microscopy and x-ray micotomography was used to determine the average pore size (540-680ìm) of each scaffold. Cytocompatibility of each scaffold was conducted using murine mesenchymal stem cells. © 2013 IEEE.


Gallium Containing Glass Polyalkenoate Bone Cements: Ion Release And E. Coli Inhibition, L. Placek, A. W. Wren, A. Coughlan, Mark R. Towler Nov 2013

Gallium Containing Glass Polyalkenoate Bone Cements: Ion Release And E. Coli Inhibition, L. Placek, A. W. Wren, A. Coughlan, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

The Glass Polyalkenoate Cement (GPC) series (LCon., LGa-1 and LGa-2) containing gallium (Ga) and a 50 wt% addition of E11 polyacrylic acid (PAA), previously developed, was evaluated for ion release, specifically Si, Ca, Zn and Ga, and E. coli inhibition. The maximum inhibition was observed in the t = 0 samples and was 0.35 mm for LCon. and 0.65 mm for LGa-1 and LGa-2. © 2013 IEEE.


Dna Based Carbon Nanotube Porphyrin Nanohybrids Molecular Recognization And Regeneration, Molly M. Riccitelli, Hanyu Zhang, Jong Hyun Choi Oct 2013

Dna Based Carbon Nanotube Porphyrin Nanohybrids Molecular Recognization And Regeneration, Molly M. Riccitelli, Hanyu Zhang, Jong Hyun Choi

The Summer Undergraduate Research Fellowship (SURF) Symposium

In the search to improve solar cells, scientists are exploring new materials that will provide better current transfer. One material that has emerged as a strong contender is the single walled carbon nanotube (SWNT). Current DNA-SWNT based films combined with chromophores have poor operational lifetimes compared to commercial solar cells. Once exposed to light the chromophore begins to degrade, eventually rendering the solar cell unusable. To solve this problem, we used a method involving multiple steps. First we found which DNA sequences formed structures around the SWNT that could hold the most chromophores by using a spectrophotometer to test the …


Multi-Factorial Stability Study Of Metabolites, Ruijun Zheng, John A. Morgan Oct 2013

Multi-Factorial Stability Study Of Metabolites, Ruijun Zheng, John A. Morgan

The Summer Undergraduate Research Fellowship (SURF) Symposium

Previous research done on metabolites has found that high energy compounds like adenosine triphosphate(ATP), nicotinamide adenine dinucleotide phosphate reduced (NADPH) or nicotinamide adenine dinucleotide reduced (NADH) are unstable in cell extracts at relatively high temperature and acidic condition. The multifactorial stability study of metabolites enables us to verify the best condition of storage for these energy compounds and sugar phosphates, as well as to strengthen the understanding of metabolism in biological study. As the most solvents for high performance liquid chromatography (HPLC) are acidic and unfavorable for these energy compounds, it is necessary to perform a detailed study about …


Tobacco Mosaic Virus Implemented As An Interfacial Layer In Organic Photovoltaic Cells, Monica D. Del Real, Bryan Boudouris Oct 2013

Tobacco Mosaic Virus Implemented As An Interfacial Layer In Organic Photovoltaic Cells, Monica D. Del Real, Bryan Boudouris

The Summer Undergraduate Research Fellowship (SURF) Symposium

Organic photovoltaics (OPVs) are flexible, light weight, and economical to produce due to low processing temperatures, solution processing, and print fabrication. This makes them optimal for a wide range of applications. However, the efficiencies of OPVs are currently not high enough for them to be viable in the market or to be able to compete with inorganic photovoltaics. Therefore the integration of new materials and methods into OPVs in order to increase their efficiency is a vital field. One way to increase the efficiency of OPVs is to increase the surface area in-between layers to allow for enhanced electron transport. …


Biomarkers For Vincristine-Induced Neuropathy, Danni Li, Jayachandran Devaraj, Doraiswami Ramkrishna Oct 2013

Biomarkers For Vincristine-Induced Neuropathy, Danni Li, Jayachandran Devaraj, Doraiswami Ramkrishna

The Summer Undergraduate Research Fellowship (SURF) Symposium

Vincristine is a vinca alkaloid, a commonly used chemotherapy drug for treating leukemia, lymphoma, multiple myeloma and some pediatric cancers. Its major dose-limiting side effect is peripheral neuropathy. The current dosing of “standard-dose-for-all” ignores the genetic and phenotypic variations among different patients, and causes severe neuropathy in some patients while ineffectively treats the others. In the present study, we aim to discover novel biomarkers involved in vincristine-induced neuropathy and identify patients with varied metabolic characteristics. Thus treatment can be tailored accordingly to improve outcomes of vincristine treatment. Pre-dose and post-dose serum samples were collected from two groups of patients (low …


Adhesive Elastomeric Proteins, Haefa Mansour, Julie Liu Oct 2013

Adhesive Elastomeric Proteins, Haefa Mansour, Julie Liu

The Summer Undergraduate Research Fellowship (SURF) Symposium

Sutures and staples commonly used to close surgical wounds tend to be much stiffer than the surrounding tissue, often resulting in external tissue damage. Surgical adhesives provide a promising alternative to these sutures and staples. Ideal surgical adhesives are biocompatible, able to set well and remain sticky in moist conditions, possess strong adhesive and cohesive properties, and exhibit mechanical properties that mimic those of the surrounding tissue. Unfortunately, the adhesives available today are unable to satisfactorily meet all of these criteria. We are utilizing protein engineering techniques to design, create, and test a new surgical adhesive that combines the adhesive …


Why Is Charcoal So Effective For Plant Growth?, Makoto Ogawa Oct 2013

Why Is Charcoal So Effective For Plant Growth?, Makoto Ogawa

USBI Biochar Conferences

No abstract provided.


Bacteriorhodopsin-Based Sensors, Craig Friedrich, Donald Lueking, Mark Griep Oct 2013

Bacteriorhodopsin-Based Sensors, Craig Friedrich, Donald Lueking, Mark Griep

Michigan Tech Patents

A sensor comprising a membrane containing bacteriorhodopsin. In one embodiment, the sensor comprises a layer of purple membrane between a first and a second electrode, wherein the electrodes are connected to a circuit such that a signal is produced when a charge is transferred across the membrane. In another embodiment, the sensor comprises a field effect transistor with a layer of purple membrane deposited on the gate. The layer of purple membrane may be further functionalized by adding fluorophores to the layer of purple membrane. The fluorophores may be deposited adjacent to the layer of purple membrane, or the fluorophores …


Comparison Of A Sio2-Cao-Zno-Sro Glass Polyalkenoate Cement To Commercial Dental Materials: Ion Release, Biocompatibility And Antibacterial Properties, A. W. Wren, A. Coughlan, M. M. Hall, M. J. German, Mark R. Towler Sep 2013

Comparison Of A Sio2-Cao-Zno-Sro Glass Polyalkenoate Cement To Commercial Dental Materials: Ion Release, Biocompatibility And Antibacterial Properties, A. W. Wren, A. Coughlan, M. M. Hall, M. J. German, Mark R. Towler

Chemical and Biochemical Engineering Faculty Research & Creative Works

Ion Release and biocompatibility of a CaO-SrO-ZnO-SiO2 (BT 101) based glass polyalkenoate cement (GPC) was compared against commercial GPCs, Fuji IX and Ketac Molar. The radiopacity (R) was similar for each material, 2.0-2.8. Ion release was evaluated on each material over 1, 7, 30 and 90 days. BT 101 release included Ca (23 mg/L), Sr (23 mg/L) Zn (13 mg/L), Si (203 mg/L). Fuji IX release includes Ca (0.7 mg/L), Al (3 mg/L) Si (26 mg/L), Na (60 mg/L) and P (0.5 mg/L) while Ketac Molar release includes Ca (1 mg/L), Al (0.6 mg/L) Si (23 mg/L), Na (76 …


Fate Of Estrogens In Anaerobic Digestion And Their Removal In Advanced Oxidation, Shubhajit Sarkar Aug 2013

Fate Of Estrogens In Anaerobic Digestion And Their Removal In Advanced Oxidation, Shubhajit Sarkar

Electronic Thesis and Dissertation Repository

Estrogenic compounds are most significant endocrine disrupting compounds (EDC), which are of primary concern due to their widespread presence in the aqueous environment and also due to their adverse impact both on aquatic life and potential risk to human health. Conventional wastewater treatment plants are not designed to remove EDC, with biosorption on biosolids as the predominant removal mechanism. Anaerobic digestion is one of the most preferred processes employed for sludge stabilization in wastewater treatment plants. Advanced oxidation processes (AOPs) are seen as promising technologies for removal of estrogens from the environment. In this research, a controlled degradation study of …


Effect Of Plant Hormones On The Production Of Biomass And Lipid In Microalgae, Malihe Mehdizadeh Allaf Aug 2013

Effect Of Plant Hormones On The Production Of Biomass And Lipid In Microalgae, Malihe Mehdizadeh Allaf

Electronic Thesis and Dissertation Repository

Limited fossil fuel reserves, increasing demand for energy in all parts of the world are some driving forces to look for new sources of transportation fuels. Among different options available, microalgae are currently attracting wide interests as an alternative and renewable fuel source.

Microalgae are single cell photosynthetic organisms that are known for rapid growth and high energy content and as a part of photosynthesis; they produce oil that can be used as a feedstock for biodiesel production. Some algae strains could contain lipid up to 80% of the dry biomass. The amount of lipid production is in direct relation …


Characterization And Quantification Of Monomers, Oligomers, And By-Products From Switchgrass Hemicelluloses During Biomass Pretreatment, Kris Allan Bunnell Aug 2013

Characterization And Quantification Of Monomers, Oligomers, And By-Products From Switchgrass Hemicelluloses During Biomass Pretreatment, Kris Allan Bunnell

Graduate Theses and Dissertations

Production of fuels and chemicals from biomass is contingent upon economical release of carbohydrates from biomass. Carbohydrates can then be used for production of bio-based products using a biochemical conversion process. Pretreatment, the first step of the biochemical conversion process, has been suggested to be the most costly step of the conversion process. Thus, better understanding the behavior of biomass during pretreatment is imperative for an economically viable production of biofuels and chemicals. Elucidating the physicochemical properties of biomass and developing an understanding the depolymerization patterns of biomass during pretreatment will help progress towards this goal.

In this study, July- …


Algae To Propellants: Biosynthesis Of 1,2-Propanediol From Algal Derived Sugars, Lauren Rachelle Merriman Aug 2013

Algae To Propellants: Biosynthesis Of 1,2-Propanediol From Algal Derived Sugars, Lauren Rachelle Merriman

Graduate Theses and Dissertations

Propylene glycol dinitrate (PGDN) is an important component used in the formulation of energetic materials. A renewable, environmentally-friendly and effective production technique for the production of 1,2-propanediol, an important precursor to PGDN, is desired. While fermentation of 1,2-propanediol has been achieved, it suffers from major limitations such as expensive feed sugars and relatively low yields. It is hypothesized that algae sugars could serve as a feedstock for the microbial synthesis of 1,2-propanediol, thereby reducing production costs and enhancing sustainability.

Algal biomass produced from an Algal Turf Scrubber® has proven to have significant potential as a source of fermentable materials. However, …


Application Of Synthetic Biology For Increasing Anaerobic Biodiesel Production In Escherichia Coli, Michael Christopher Wierzbicki Aug 2013

Application Of Synthetic Biology For Increasing Anaerobic Biodiesel Production In Escherichia Coli, Michael Christopher Wierzbicki

Masters Theses

The ever-increasing demand for transportation biofuels requires new and novel approaches to solve the complexities associated with efficient biofuel production. Ethanol, the most common biofuel, has physical limitation associated with difficulty of separations and issues with water contamination and as such is not a long-term transportation fuel solution. (Lou & Singh, 2010; Wheals, Basso, Alves, & Amorim, 1999) Biodiesel is seen as a possible alternative to ethanol due to its hydrophobicity and also has comparable energy density and cetane number to its petroleum derived counterpart. (Kalscheuer, Stölting, & Steinbüchel, 2006) Because of feedstock limitations, biodiesel produced from vegetable oils is …


Filomicelle Functionalization And Stability Studies With Applications For Malaria Treatments, Megan Haoyun Yang Aug 2013

Filomicelle Functionalization And Stability Studies With Applications For Malaria Treatments, Megan Haoyun Yang

Masters Theses

Malaria is an infectious disease caused by the parasite Plasmodium that is transmitted by mosquitoes. It is estimated that malaria causes 1.1 million deaths per year globally. While anti-malarial drugs have been effective in treating infected individuals, new methodologies are needed. Treatments may benefit from approaches that encapsulate drugs in vehicles allowing for more effective delivery. To this end, the use of targeted drug delivery vehicles called filomicelles to treat malaria is proposed.

Certain amphiphilic diblock copolymers self-assemble into filomicelles (long and stable cylindrical micelles), which are capable of carrying hydrophobic drugs in the bodies of rodents. It is shown …


Scale-Up Of Bubble Column Reactors: A Review Of Current State-Of-The-Art, Ashfaq Shaikh, Muthanna H. Al-Dahhan Jun 2013

Scale-Up Of Bubble Column Reactors: A Review Of Current State-Of-The-Art, Ashfaq Shaikh, Muthanna H. Al-Dahhan

Chemical and Biochemical Engineering Faculty Research & Creative Works

In Multiphase Flow Reaction Systems, in General, an Extrapolation of Small Diameter Behavior to Larger Ones is Always an Important and Challenging Task. the Critical Issue in Such an Extrapolation Remains to Be Mixing and Hydrodynamic Characteristics. It Needs Reliable Similarity Criteria that Would Result in Similar Mixing and Hydrodynamics and Hence Transport and Performance in Two Different Scales. Numerous Experimental and Computational Studies Have Been Performed to Investigate the Flow Behavior of Bubble Column Reactors for a Proper Design and Scale-Up. Experimental Techniques Vary from Simple Visual Observation to More Advanced Noninvasive Diagnostic Techniques. on Computational Front the Progress …


Materials Education And Research In Art And Design: A New Role For Libraries (Website), Mark Pompelia Jun 2013

Materials Education And Research In Art And Design: A New Role For Libraries (Website), Mark Pompelia

Materials Education and Research in Art and Design: A New Role for Libraries

No abstract provided.


Materials Education And Research In Art And Design: A New Role For Libraries (Program Sheet), Mark Pompelia Jun 2013

Materials Education And Research In Art And Design: A New Role For Libraries (Program Sheet), Mark Pompelia

Materials Education and Research in Art and Design: A New Role for Libraries

No abstract provided.


Materials Education And Research In Art And Design: A New Role For Libraries (Program Booklet), Mark Pompelia Jun 2013

Materials Education And Research In Art And Design: A New Role For Libraries (Program Booklet), Mark Pompelia

Materials Education and Research in Art and Design: A New Role for Libraries

No abstract provided.


Materials Education And Research In Art And Design: A New Role For Libraries (Survey Stats), Mark Pompelia Jun 2013

Materials Education And Research In Art And Design: A New Role For Libraries (Survey Stats), Mark Pompelia

Materials Education and Research in Art and Design: A New Role for Libraries

No abstract provided.


Materials Collection Creation And Administration: A New Role For Libraries (White Paper), Mark Pompelia Jun 2013

Materials Collection Creation And Administration: A New Role For Libraries (White Paper), Mark Pompelia

Materials Education and Research in Art and Design: A New Role for Libraries

The Problem/Opportunity: To define, identify, and guide design-based materials collections in academic settings and foster community among those with existing collections and/or those considering creating and supporting one.

Contents and topics:

  1. What is a materials collection?
  2. Why have a materials collection?
  3. Acquisition strategies
  4. Organizational approaches
  5. Programming possibilities
  6. Symposium summary
  7. Resources