Digital Commons Network^™

Re-Mediating Nature: Environmental Entropy, Urban Parks, And The Boise River Greenbelt, Quinn Zachary Anderson

Boise State University Theses and Dissertations

Urban greenspaces are integral to the healthy functioning of a city. They provide heat relief, flood prevention, act as sites of community engagement and creation, and are home to charismatic flora and fauna, to name just a few of their roles. However, this importance has not translated to scholarly analysis. This thesis aims to address this shortcoming in several ways. Firstly, it introduces the typology of environmental entropy, a framework of analysis that recontextualizes greenspaces as blended landscapes, where nature and culture and human and nonhuman agency equilibrate. Using environmental entropy, the rest of the paper examines urban parks …

Emergence, Evolution, And Outcomes Of Community-Based Conservation Behaviors In Coastal Systems, Matthew C. Clark

Boise State University Theses and Dissertations

This body of work leverages a variety of quantitative and theoretical approaches to advance our understanding of why individuals adopt community-based conservation behaviors, the impacts those decisions have on natural resources and human wellbeing, and how these insights can be used for practical conservation planning. The first chapter makes a theoretical contribution by fitting data produced from a stylized, agent-based simulation of conservation adoption over time with a set of probabilistic differential equations derived from the theory of diffusion of innovations and cultural evolutionary theory broadly. We use these methods to demonstrate that such a statistical approach can provide accurate …

Systematic Investigation Of Wavy Surface Roughness Profiles Using Common Roughness Algorithms, Russell Gray

Boise State University Theses and Dissertations

Roughness is an important parameter in rock engineering. Sine wave-based simulated wavy profiles were used to investigate systematic changes of amplitude and frequency on roughness indices. Profiles were 1000 mm in length with amplitude ranging from 0-10 mm and frequency ranging from 0-10 Hz. The roughness algorithms used were Root Mean Square (RMS), Energy, Sinuosity, Z2, Mean Absolute Angle (MAA), and Modified Divider a-Value. Roughness indices were visualized as contour plots. Similarities of the shapes and spacing of the contours as well as the magnitude of the roughness indices prompted the pairing of RMS and Energy algorithms, Z2 and MAA …

Evaluating Learning Geometric Concepts To Generate Predicate Abstract Domains In Static Program Analysis, Patrick Chadbourne

Boise State University Theses and Dissertations

Accuracy of static analysis over predicate abstract domains depends on the partitions of predicates. More precise predicates approximate concrete values of program variables resulting in more accurate analysis. Manual reasoning about these partitions must be done on a case-by-case basis and is time consuming and difficult.

This work explores learning geometric concepts to automate discovery of predicate domain candidates.

The proposed framework uses run-time data from program executions to gather training data for a PAC-learner to generate separating hyperplanes that can be projected onto predicate domains.

The thesis implements the framework and performs evaluations of it effectiveness on a set …

Hydraulic Conductivity's Impact On Rise Of Excess Pore-Water Pressure During Seismic-Induced Liquefaction, Holly Gunderson

Boise State University Theses and Dissertations

Liquefaction is a geohazard causing loss of lives and infrastructure around the world. During earthquakes the shaking of the ground may cause a loss of soil strength that results in the settlement of buildings, landslides, failure of earth dams, amongst other hazards (Liquefaction of Soils During Earthquakes, 1985). Liquefaction is the result of a sudden increase in the pore-water pressure (PWP)— referred to as excess pore-water pressure (EPWP)— in loose, saturated, noncohesive, fine soils during seismic shaking. Due to the small pores and low hydraulic conductivity of these soils, the shaking-induced EPWP has less time to dissipate, leading to the …

A Dna Aptamer Transducer Designed Toward Rapid Biosensor Development: A Novel Approach To Modular Biosensing Platforms, Timothy Z. Hachigian

Boise State University Theses and Dissertations

Aptamer-based biosensors have garnered significant interest due to their versatility in detecting a wide range of analytes across various applications. In this work, a customizable Aptamer Transducer (AT) was introduced as a non-enzymatic and modular duplexed aptamer biosensing platform. The design modularity was accomplished by separating the aptamer input domain from the output domain. The AT was demonstrated to be capable of fully transducing an adenosine signal into arbitrary DNA outputs using a structure-switching aptamer design. The AT design utilized strand displacement reactions via toehold mediated strand displacement with fluorescence based reporting for signal detection. Furthermore, the AT was incorporated …

Multiphysics Numerical Modeling For Pfas Transport Within Vadose And Saturated Zones, Pierrette Iradukunda

Boise State University Theses and Dissertations

The extent and severity of wildfires have increased around the world, necessitating a greater understanding of the consequences of wildfire and post-fire impacts on soil and groundwater. Wildfire suppression techniques like aqueous film-forming foams (AFFF) can also contaminate the soil with per- and polyfluoroalkyl substances (PFAS), which can contribute to human and environmental health concerns. PFAS are dangerous man-made chemical compounds that are persistent, mobile, poisonous, and a major cause of soil and groundwater contamination. In addition to contamination by aqueous film-forming foams, PFAS has accumulated in the environment as a result of being utilized in numerous other goods over …

Enhanced Hardware Trojan Detection In Chips By Reducing Linearity Between Features, Alfred M. S. Moussa

Boise State University Theses and Dissertations

Globally, there has been an increase in demand for System on Chip (SoC) applications, active medical implants, and Internet of Things (IoT) devices. However, due to challenges in the global supply chain, the design, fabrication, and testing of Integrated Circuits are often outsourced to untrusted third-party entities around the world rather than a single trusted entity. This situation presents an opportunity for adversaries to compromise the device’s integrity, performance, and functionality by inserting malicious modifications known as Hardware Trojans (HTs) into the original design. HTs can also create a backdoor in the system for malicious alterations.

The problem of hardware …

Seed Predation By Harvester Ants On Native Grasses And Forbs: Implications For Management In A Changing Landscape, Michaela Grossklaus

Boise State University Theses and Dissertations

Vegetation restoration efforts in the sagebrush steppe to date have yielded mixed results. Although many factors contribute to variation in restoration outcomes, seed predation by harvester ants may be an important yet overlooked source of seed loss. Using a selection of grass and forb seeds commonly seeded in local restoration projects, we conducted a field experiment to evaluate whether seed species and spatial arrangement (i.e., distance of seed patches from ant colonies and from each other) affected patterns of seed consumption by Owyhee harvester ants, Pogonomyrmex salinus. To further examine the ecological factors that may affect foraging by harvester …

Effect Of Age On The Mechanical Behavior And Molecular Structure Of Human Meniscus: An Experimental And Computational Analysis, Derek Q. Nesbitt

Boise State University Theses and Dissertations

The knee meniscus is a soft fibrous tissue with a high incidence of injury in older populations. Surgical treatments do not fully restore the functionality of the meniscus, and the meniscus lacks native healing capacity, leading to a 40% increase in the probability of developing osteoarthritis once torn. Meniscus injury prevention is thus paramount to reducing the onset of osteoarthritis. Despite the importance of the meniscus in joint health, its mechanical properties, and how these change with age, are poorly understood. In order to quantify these properties, and how they change with age, we performed uniaxial tensile tests on two …

Robust Digital Nucleic Acid Memory, Golam Md Mortuza

Boise State University Theses and Dissertations

The rapid growth of data generation from electronic devices has created a critical demand for efficient and sustainable data storage solutions. Traditional storage systems face challenges regarding reliability, energy consumption, and scalability, necessitating the exploration of alternative technologies. This dissertation explores the potential of Deoxyribonucleic Acid (DNA) as an alternative storage medium, along with the associated challenges and potential solutions.

This dissertation focuses on Digital Nucleic Acid Memory (dNAM), which utilizes Single Molecule Localization Microscopy (SMLM) to encode and store data within DNA structures called DNA origami. SMLM surpasses the limitations of light’s diffraction limit, enabling the imaging of biological …

Maximizing The Performance Of Geocell Reinforced Pavement Bases With High-Fines Content Soils Through Micp Treatments, Ajay Kumar Reddy Pisati

Boise State University Theses and Dissertations

Crushed stone and gravel have long been favored for their stability and interlocking properties in Geocell reinforced base course layers of flexible pavement structures. However, their drawbacks, such as depleting reserves, escalating permit costs, environmental compliance, and extensive quarrying impacts, have led researchers to seek alternative options like recycled and on-site materials. Within this framework, utilizing native soil emerges as a promising solution to tackle these challenges. Nevertheless, the grading specifications impose limitations on the fines content allowed in base courses, as determined by the No. 200 sieve. However, the grading specifications pose restrictions on the permissible fines content in …

An Experimental And Numerical Investigation Of Bimodal Particle Distributions For Enhanced Thermal Conductivity In Concentrating Solar Power Applications, Dallin Daniel Stout

Boise State University Theses and Dissertations

Solid particles have recently attracted substantial interest as a thermal transport medium in high-temperature energy storage and thermal energy conversion systems due to their ability to operate at high temperatures (up to 1000 °C). This is especially useful in the concentrating solar power (CSP) industry where solid particles are utilized as heat transfer media. Thermal conductivity of particles in CSP is critically important to the overall heat transfer that occurs within a heat exchanger. A cheap and effective avenue to increase the thermal conductivity of a particle distribution is by reducing its porosity by employing 2 differently sized particles. The …

Fair Layouts In Information Access Systems: Provider-Side Group Fairness In Ranking Beyond Ranked Lists, Amifa Raj

Boise State University Theses and Dissertations

Information access systems, such as search engines and recommender systems, often display results in ranked order based on their estimated relevance. The fairness of these rankings has received attention as an important evaluation criteria along with traditional metrics capturing constructs such as utility or accuracy. Fairness has many facets, including provider and consumer-side fairness at both group and individual levels. Research on provider-side group fairness involve concerns regarding measurement and optimization of fairness in ranking. Although there are several fair ranking metrics to measure provider-side group fairness based on various “sensitive attributes”, multiple open challenges still exist in this area …

Development Of Predictive Rockfall Runout Maps Based On Calibrated Rockfall Models, Olivia Tabor

Boise State University Theses and Dissertations

Cliffs formed in columnar jointed basalt have the proper geometry and discontinuities to initiate rockfall events. There are a number of locations in Boise, Idaho that may experience rockfall events from columnar jointed basalt cliffs. Publicly available LiDAR data coupled with site reconnaissance activities were used to develop calibrated two-dimensional rockfall models at a study site in southeast Boise. Photogrammetry was used to determine the volume of seven calibration boulders. The study site, located on Whitney Terrace, consists of a columnar jointed basalt cliff followed by a slope with a subdivision at the toe of the slope.

The two common …

Poly(Alkyl Aldehyde)S: A New Class Of Closed-Loop Recyclable Plastics, Kyle Arnold Nogales

Boise State University Theses and Dissertations

This dissertation will describe a new class of closed-loop recyclable, self-immolative polymers that undergo selective, complete, and rapid depolymerization in the solid state when triggered. Self-immolative poly(alkyl aldehyde)s are synthesized efficiently in approximately 60% yield using anionic polymerization, which provides access to polymers in accessible lengths ranging from short (M_n value of 2 kDa) to long polymers (M_n value of 5,000 kDa). The physical and thermal properties of the polymers can be tuned rationally by appropriate choice of the aldehyde monomer, with some of the polymers displaying mechanical properties that are similar to traditional plastics. The polymers depolymerize …

Carbon/Carbon Composites For Next Generation Microvascular Solar Thermal Receivers, Matt Zuzelski

Boise State University Theses and Dissertations

Concentrating solar power (CSP) is a method of renewable solar power generation where the sun’s radiant energy is collected by a receiver and converted into thermal energy. This thermal energy is then passed into a heat transfer fluid and either sent to thermal storage, or a steam power plant. One path to better CSP systems is improving the operational envelope of the receiver and heat transfer fluid (HTF) system by utilizing more resilient absorbing materials, different path architectures, and HTFs with higher allowable temperatures.

A new carbon/carbon composite is being developed with the potential to function as the absorbing material …

Analysis Of Emerging Constituents In An Activated Sludge Treatment Facility, Abigail Mae Sigurdson Ryan

Boise State University Theses and Dissertations

Emerging constituents (ECs), or contaminants of emerging concern (CECs), are pharmaceuticals and personal care products (Contaminants of Emerging Concern including Pharmaceuticals and Personal Care Products | US EPA, 2023). The primary source of ECs in surface waters is the discharge from wastewater treatment facilities (WWTF) (Kumar et al., 2022). Little is known about the effects treatment processes have on ECs. Research regarding ECs has increased due to the threats they pose to the environment and human health (Khan et al., 2021). This research aimed to expand understanding ECs’ fate through an activated sludge WWTF. This was accomplished by studying concentrations …

Study Of Dry Mixing Method To Apply Microbial-Induced Calcite Precipitation For Soil Treatment, Ruchi Shrestha

Boise State University Theses and Dissertations

Microbially Induced Calcite Precipitation (MICP) has emerged as a promising technique for soil stabilization, traditionally involving the preparation and mixing of treatment solutions with the soil. However, this thesis explores a novel approach of applying MICP by directly mixing dry chemical compounds into the soil and subsequently adding water. This alternative method offers potential advantages in terms of convenience, ease of implementation, and cost savings.

The objective of this research is to investigate the applicability of dry mixing protocols for MICP in soil stabilization. Through comprehensive experimentation, three different dry protocols were developed and applied to five different soils. The …

Asia’S Moment: Contextualizing The Rules Of The Corporate Governance Game, Dan W. Puchniak

Research Collection Yong Pung How School Of Law

Whether this century is Asia’s century is still open for debate. What is clear now, however, is that understanding corporate governance in Asia is a paramount issue of global importance. Asia is forecast to account for an astonishing 70% of global growth in 2023.

Lex Cryptographica Financiera, Rosa M. Lastra, J.G. Allen

Research Collection Yong Pung How School Of Law

The past year has witnessed significant growth in the size, and mainstream profile, of financial markets built on distributed ledger technology (“DLT”), in particular “blockchain”. In February 2021, the market capitalisation of the cryptoasset Bitcoin, which is built on the first operational blockchain, topped USD 1 trillion. So-called decentralised finance (“DeFi”), built mostly on the Ethereum blockchain, grew from less than USD 1 billion to over USD 80 billion in May 2021. Even if one adopts a sceptical posture towards these developments, “crypto” markets cannot be ignored by scholars or practitioners of financial and monetary law.

Assessing The Effects Of A Mixed Eimeria Spp. Challenge On Performance, Intestinal Integrity, And The Gut Microbiome Of Broiler Chickens, Danielle Graham, Victor Petrone-Garcia, Xochitl Hernandez-Velasco, Makenly E. Coles, Marco A. Juarez-Estrada, Juan D. Latorre, Jianmin Chai, Stephanie Shouse, Jiangchao Zhao, Aaron Forga, Roberto Señas-Cuesta, Lauren Laverty, Kristen Martin, Carolina Trujillo-Peralta, Ileana Loeza, Latasha Gray, Billy M. Hargis, Guillermo Tellez-Isaias

Poultry Science Faculty Publications and Presentations

A mixed Eimeria spp. challenge model was designed to assess the effects of challenge on broiler chicken performance, intestinal integrity, and the gut microbiome for future use to evaluate alternative strategies for controlling coccidiosis in broiler chickens. The experimental design involved broiler chickens divided into two groups: a control group (uninfected) and a positive control group, infected with Eimeria acervulina (EA), Eimeria maxima (EM), and Eimeria tenella (ET). At day-of-hatch, 240 off-sex male broiler chicks were randomized and allocated to one of two treatment groups. The treatment groups included: (1) Non-challenged (NC, n = 5 replicate pens); and (2) challenged …

Cooperative Activation Of Pdk1 And Akt By Mapk4 Enhances Cancer Growth And Resistance To Therapy, Tao Shen, Xiangsheng Huang, Ping Yi, Bingning Dong, Feng Yang

Faculty, Staff and Students Publications

Phosphoinositide-dependent kinase-1 (PDK1) is a master kinase of the protein A, G, and C (AGC) family kinases that play important roles in regulating cancer cell proliferation, survival, and metabolism. Besides phosphorylating/activating AKT at the cell membrane in a PI3K-dependent manner, PDK1 also exhibits constitutive activity on many other AGC kinases for tumor-promoting activity. In the latter case, PDK1 protein levels dominate its activity. We previously reported that MAPK4, an atypical MAPK, can PI3K-independently promote AKT activation and tumor growth. Here, using triple-negative breast cancer (TNBC) cell models, we demonstrate that MAPK4 can also enhance PDK1 protein synthesis, thus phosphorylate/activate PDK1 …

Proteomics Of Adjacent-To-Tumor Samples Uncovers Clinically Relevant Biological Events In Hepatocellular Carcinoma, Shisheng Wang, Yuejia Liu, Liangqing Dong, Qian Meng, Jing Gao, Yuqiu Wang, Nixue Song, Yuying Suo, Li Ding, Pei Wang, Bing Zhang, Daming Gao, Jia Fan, Qiang Gao, Hu Zhou

Faculty, Staff and Students Publications

Normal adjacent tissues (NATs) of hepatocellular carcinoma (HCC) differ from healthy liver tissues and their heterogeneity may contain biological information associated with disease occurrence and clinical outcome that has yet to be fully evaluated at the proteomic level. This study provides a detailed description of the heterogeneity of NATs and the differences between NATs and healthy livers and revealed that molecular features of tumor subgroups in HCC were partially reflected in their respective NATs. Proteomic data classified HCC NATs into two subtypes (Subtypes 1 and 2), and Subtype 2 was associated with poor prognosis and high-risk recurrence. The pathway and …

Androgen-Regulated Stromal Complement Component 7 (C7) Suppresses Prostate Cancer Growth, Shan Li, Huiyun Sun, Martine P Roudier, Daniel W Lin, Lawrence True, Colm Morrissey, Chad J Creighton, John K Lee, Li Xin

Faculty, Staff and Students Publications

The complement system is a major component of the innate immune system that works through the cytolytic effect of the membrane attack complex (MAC). Complement component 7 (C7) is essential for MAC assembly and its precisely regulated expression level is crucial for the cytolytic activity of MAC. We show that C7 is specifically expressed by the stromal cells in both mouse and human prostates. The expression level of C7 inversely correlates with clinical outcomes in prostate cancer. C7 is positively regulated by androgen signaling in the mouse prostate stromal cells. The androgen receptor directly transcriptionally regulates the mouse and human …

T-Cell Receptor Beta Variable Gene Polymorphism Predicts Immune-Related Adverse Events During Checkpoint Blockade Immunotherapy, Dzifa Yawa Duose, Jeffrey M Conroy, Carl Morrison, Anas Alshawa, Mingxuan Xu, Abdulrazzak Zarifa, Sapna P Patel, Ying Yuan, Evan Kwiatkowski, Linghua Wang, Jordi Rodon Ahnert, Siqing Fu, Funda Meric-Bernstam, Geoffrey M Lowman, Timothy Looney, Aung Naing

Faculty, Staff and Students Publications

BACKGROUND: Immune checkpoint inhibitors have revolutionized cancer treatment. However, they are associated with a unique spectrum of side effects, called immune-related adverse events (irAEs), which can cause significant morbidity and quickly progress to severe or life-threatening events if not treated promptly. Identifying predictive biomarkers for irAEs before immunotherapy initiation is therefore a critical area of research. Polymorphisms within the T-cell receptor beta (TCRB) variable (TRBV) gene have been implicated in autoimmune disease and may be mechanistically linked to irAEs. However, the repetitive nature of the TCRB locus and incomplete genome assembly has hampered the evaluation of TRBV polymorphisms in the …

Trim28 Modulates Nuclear Receptor Signaling To Regulate Uterine Function, John P Lydon, San-Pin Wu, Francesco J Demayo

Faculty, Staff and Students Publications

Estrogen and progesterone, acting through their cognate receptors the estrogen receptor α (ERα) and the progesterone receptor (PR) respectively, regulate uterine biology. Using rapid immunoprecipitation and mass spectrometry (RIME) and co-immunoprecipitation, we identified TRIM28 (Tripartite motif containing 28) as a protein which complexes with ERα and PR in the regulation of uterine function. Impairment of TRIM28 expression results in the inability of the uterus to support early pregnancy through altered PR and ERα action in the uterine epithelium and stroma by suppressing PR and ERα chromatin binding. Furthermore, TRIM28 ablation in PR-expressing uterine cells results in the enrichment of a …

Effects Of Cobalt Salts On Biomass Conversion To Functional Carbon-Based Catalysts For Peroxymonosulfate Activation, Zhihao Tian, Qianru Chen, Shiying Ren, Huayang Zhang, Wenjie Tian, Hongqi Sun, Shaobin Wang

Research outputs 2022 to 2026

Metal functionalization is an effective structure-engineering strategy for preparing biomass-derived carbon materials, whereas the influences of different metal precursors on the structure and catalytic performance remain unclear. Herein, an investigation of four typical cobalt salts for pyrolytic biomass conversion is performed. The melting points and anion species of cobalt salts are found to be critical factors. Co-salts (cobalt nitrate (Co(NO3)2), cobalt acetate (Co(OAc)2), cobalt acetylacetonate (Co(acac)2)) melted at low temperatures ( ≤ 165 °C) could promote mesopore formation and catalyze the graphitization process of a biomass flower during the carbonization, finally forming mesoporous graphitic carbon matrixes with Co@graphitic-C nanoparticles and …

The Spanish Society For The Study Of Pastures: 45 Years Promoting Better Pasture Knowledge And Management, A. San Miguel

IGC Proceedings (1977-2023)

The Spanish Society for the Study of Pastures (SEEP) (http://www.seepastos.es) was founded in 1960 through the initiative of Prof. G. González with the intention of combining efforts and initiatives on pasture studies from many points of view. The Society has the objective of promoting the knowledge and improvement of Spanish pastures, regarding every issue related with pastoral science: typology; ecology and functions of pastoral ecosystems; plant production; feeding value; animal production; economics; sociology and agricultural policy, etc. The term 'Pasture' is considered in a broad sense to include every plant part, individual or community capable of being used for livestock …

Alumni Notes, Linfield Magazine Staff

Linfield Magazine

News about Linfield alumni