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Assessing Impact Of Food Structure On Oral Tribology And In-Vitro Digestion Of Dairy Products, Lamis Ali

All Graduate Theses and Dissertations, Fall 2023 to Present

In this research, we focused on understanding the critical elements impacting consumer experience and the nutritional value of dairy products, specifically their texture, mouthfeel, and protein breakdown in the gastrointestinal tract. Our study aimed to accomplish two main goals. First, we performed analysis of the tribological attributes of various commercially dairy products. The second objective was to investigate the process of disintegration and protein release in selected dairy products.

The study included an assessment of eight dairy products of varied consistencies: solid like cheddar, cheese curd, and parmesan; semi-solid such as cottage cheese, ricotta cheese, and yogurt; and liquid represented …

Tracking Perfluoroalkyl Substances From Wastewater Influent To Its Accumulation In Vegetables And Forage Grass, Simon Kozik

All Graduate Theses and Dissertations, Fall 2023 to Present

Per and poly-fluorinated alkyl substances (PFAS) are a class of chemicals that are persistent in the environment. PFAS was found in wastewater, which can be used after wastewater treatment for irrigation water, and in the biosolids that can be mixed with soils to provide nutrients and generally improve soil quality. This study found when wastewater was used it increases the level of PFAS in vegetables and forage grass. PFAS concentrations were tracked from the influent of the wastewater treatment plant to the effluent, to the irrigation water, to the soil, and finally into the vegetable and forage grass grown on …

The Effects Of Aboveground Herbivory On Root Traits And Root Decomposition, Emily A. Chavez

All Graduate Theses and Dissertations, Fall 2023 to Present

Soil holds more carbon (C) than the Earth's atmosphere and vegetation combined. Soil loses carbon through soil respiration and releases CO₂ from the soil. The soil respiration rate can vary based on the chemistry of the plant litter inputs and physical factors, such as soil temperature and nutrient content. In Alaska's Yukon-Kuskokwim (YK) Delta, grazing by geese affects the chemistry of plants and the soil's physical qualities, thus altering the rate of soil respiration. Although we know that goose herbivory leads to changes in the rate of soil respiration, we know very little about how goose herbivory affects the …

Building And Using A Hydrology Experiment For Place-Based Learning With Native American Students, Michaela Shallue

All Graduate Theses and Dissertations, Fall 2023 to Present

Geoscience has a known diversity problem, specifically a participation gap of ethnic minority representation, and it is especially severe regarding Native American representation. To address this participation gap, an identity gap needs to be addressed first. Native students need to visualize themselves as geoscientists before they can commit to geoscience programs and careers. This project uses a hands-on, place-based learning activity as an opportunity for Native students to better see themselves as geoscientists.

A portable rainfall simulator was constructed, calibrated, and refined for use in teaching concepts about rainfall, runoff, and erosion. It was employed in place-based learning exercises with …

Hearing Race In The Social Studies: A Critical Interpretive Synthesis Of Culturally Responsive, Relevant, And Sustaining Pedagogies, Karen H. Washburn

All Graduate Theses and Dissertations, Fall 2023 to Present

With the growing population of linguistically, racially, and culturally diverse students in U.S. public schools, there is increasing disjuncture between current standardized policies and practices and the varied ways of knowing, being, and languaging of heterogeneous youth. Social studies researchers and educators have implemented culturally responsive, relevant, and sustaining pedagogies as tools to combat inequities within schooling for linguistically minoritized youth. To explore how the field of social studies has operationalized these pedagogies in research and practice, I conducted a critical interpretive synthesis of literature from 1995-present. In so doing, I used a raciolinguistic theoretical perspective to explore how social …

Evaluating Aspen Seedling Outplanting Success Following High Severity Wildfire In The Southwest, Sarah M. Kapel

All Graduate Theses and Dissertations, Fall 2023 to Present

Quaking aspen (Populus tremuloides Michx.) is an ecologically important forest species in the western U.S. Aspen forests host a variety of understory species, are critical wildlife habitat, and are considered a "natural fuel break" since they are less likely to support crown fires than conifers. Because of climate change and altered disturbance regimes, populations are declining, and innovative strategies are needed to restore aspen. Planting aspen seedlings is a solution, though not a common practice in the West and has been met with high mortality in past experiments. For aspen planting to be more broadly implemented, managers need guidance …

Exploring The Role Of Near Channel Geospatial Attributes To Predict Suspended Sediment Concentration Patterns Across The Conus Region, Aaron J. Sigman

All Graduate Theses and Dissertations, Fall 2023 to Present

High concentrations of suspended sediment (SSC) in a river can represent a critical water quality concern, reduce the storage capacity of reservoirs, and impact aquatic habitat. The total amount of sediment is calculated from a combination of river properties, including the amount of available sediment and the flow of water carrying the sediment. Water flow properties can be found using local information about the channel, however understanding the concentration of sediment in the river requires understanding the supply of sediment from the watershed. To understand where sediment is coming from, we examined over 1000 United States Geological Survey sites with …

Reinforcements Of A Greater Sage-Grouse Population In Utah: Applications For Range-Wide And Local Conservation Translocation Efforts, Melissa S. Chelak

All Graduate Theses and Dissertations, Fall 2023 to Present

In a small, isolated greater sage-grouse (Centrocercus urophasianus) population in the Sheeprock Mountain Sage-Grouse Management Area (SGMA) located in Utah's West Desert, peak male lek counts declined from 190 males in 2006 to 23 males in 2015. A collaborative effort across all federal, state, and local partners yielded 146 (40 male, 106 female) sage-grouse captured, marked with either a very-high frequency or global positioning systems (GPS) transmitter, and translocated into the Sheeprock sage-grouse management area between 2016 and 2019, complete with radiotelemetry monitoring during the spring and summers of 2016-2020 translocated individuals in addition to radiotelemetry monitoring of …

Radical Antiracism And Anti-Queerphobia In Politicised Education Environments Through Critical Race Theory And Queer Theory, Mina Aubrey Weeks

All Graduate Theses and Dissertations, Fall 2023 to Present

In 2023, the Utah legislature passed bills that alter how secondary education teachers can talk about “divisive topics,” usually referring to topics of race, LGBTQ, or other systemic topics like classism and nationalism. Many teachers committed to anti-racism and anti-queerphobia do not want to water down topics of race and LGBTQ, but they also do not want to lose their jobs for teaching race and LGBTQ in a way that the law restricts. Critical Race Theory and Queer Theory have typically been framed as anti-White, anti-cishet, or overall divisive by State critics due to their radical ideologies, but this comes …

Advancing Near Surface Soil Moisture Measurements Using Robotics, Automation, And Remote Sensing, Hemanth Narayan Dakshinamurthy

All Graduate Theses and Dissertations, Fall 2023 to Present

Near-surface soil moisture, or the water content within the soil, is important for understanding the interactions between land and the atmosphere, and for monitoring plants in agricultural settings. However, soil moisture can be highly variable within the same field and varies considerably with time. The challenge involved with measuring soil moisture is that traditional techniques that rely on obtaining large samples are labor and time-intensive, especially for large fields. Developments in sensor technologies have allowed users to record the soil moisture regularly at the points where the sensors are installed. However, to understand how soil moisture changes across a field …

Uv-A Light: A Novel Method For Food Dehydration, Mckade S. Roberts

All Graduate Theses and Dissertations, Fall 2023 to Present

Dehydration is one of the most prevalent forms of food preservation, with approximately 85% of food is hot air drying due to the simplicity of the process. The high temperatures employed in this method may also induce a loss in nutritional quality, which involves destruction of micronutrients (vitamins), and loss of color.

The aim of this work is to develop a low energy, non-thermal method of food dehydration that results in a high-quality product through the application of Ultraviolet light, within the UV-A range. UV light can be separated into its 3 categories based on the wavelength of light from …

Contrasting Nitrogen Sources Impact Nitrogen Use Efficiency And Soil Health Under Silage Corn Production In A Semi-Arid Environment, Phearen Kit Miller

All Graduate Theses and Dissertations, Fall 2023 to Present

Silage corn production challenges sustainable intensification and soil health in semi-arid environments because the entire aboveground biomass is harvested and removed from the field. An irrigated silage corn field study was conducted over a decade comparing nitrogen fertility sources using a complete randomized block design with four treatments: control with no nitrogen fertilizer (control), low ammonium sulfate at 112 kg N ha⁻¹ (AS100), high ammonium sulfate at 224 kg N ha⁻¹ (AS200), and steer manure compost at 224 kg total N ha⁻¹ (compost). Research focused on the impact of these contrasting nitrogen sources on silage corn production, …

Spatiotemporal Dynamics Of Disease: Social And Environmental Drivers Of Movement, Connectivity, And Disease Transmission In Bighorn Sheep, Lauren E. Ricci

All Graduate Theses and Dissertations, Fall 2023 to Present

Movement is a fundamental component of animal ecology. Animals move in order to access resources and avoid risk. Movement decisions aggregated across time determine how individuals use space, contact dynamics between individuals within a population, and connectivity across a species range. These patterns that emerge from movement decisions have downstream implications for many ecological processes and a mechanistic understanding of movement can help answer broader questions about ecology.

Disease dynamics are intrinsically tied to movement. Understanding the mechanisms that drive movement can elucidate how disease will spread and impact host populations. In this vein, I employed a suite of movement …

Spatial Ecology Of Mule Deer Migrations From Grand Teton National Park And The Teton Range, Justin K. Schwabedissen

All Graduate Theses and Dissertations, Fall 2023 to Present

The Greater Yellowstone Ecosystem hosts several of the longest, fully intact ungulate migrations remaining in the continental United States. However, expanding development and an increasing human footprint continue to truncate migratory routes. While the endpoints are often a seasonal range on protected lands, these migration corridors frequently cross other jurisdictional boundaries, including large tracts of private or multiple-use lands, with varying levels of protection. Thus, it is critical resource managers understand the dynamics of migratory movements to define population-level corridors and prioritize appropriate conservation strategies. Mule deer in Wyoming have been documented traveling long distances between summer and winter ranges; …

Exploring Farmers' Willingness To Accept Payment For Agricultural Conservation In Utah, Asif Ahmed Khan

All Graduate Theses and Dissertations, Fall 2023 to Present

In view of Utah’s drought situation and the need for conservation of water use, this thesis tries to calculate the compensation required for farmers to switch from cultivating alfalfa-which requires a lot of water, to less water-consuming crops like wheat, hay and even pasture. It proposes a new technique for this calculation using big data, including satellite images from National Aeronautics and Space Agency (NASA), agricultural statistics from National Agricultural Statistics Service (NASS), climate data from Parameter-elevation Regressions on Independent Slopes Model (PRISM) climate group and land use data from the state of Utah. These data are integrated into a …

Morphological And Physio-Biochemical Responses And Gene Expression Analyses Of Landscape Plants Under Salinity Stress, Asmita Paudel

All Graduate Theses and Dissertations, Fall 2023 to Present

Soil salinity is a significant global issue that adversely impacts the growth and development of landscape plants. One of the effective strategies to prevent salinity damage to landscape plants is to cultivate species that are tolerant to the prevailing salinity levels. Salinity tolerance varies among plant species and cultivars. Therefore, this research aimed to investigate the salinity tolerance of nine landscape plants [Albizia julibrissin (mimosa tree), Arctostaphylos uva-ursi (kinnikinnick), Cercocarpus ledifolius (curl-leaf mountain mahogany), Cercocarpus montanus ‘Coy’ (alder-leaf mountain mahogany), Penstemon barbatus ‘Novapenblu’ (rock candy blue^® penstemon), Penstemon strictus ‘Rocky Mountain’ (rocky mountain beardtongue), Punica granatum ‘Wonderful’ (pomegranate), …

Inferring A Hierarchical Input Type For An Sql Query, Santosh Aryal

All Graduate Theses and Dissertations, Fall 2023 to Present

SQL queries are a common method to retrieve information from databases, much like asking a detailed question and getting a precise answer. Plug-and-play queries simplify the process of querying. In a Plug-and-play SQL query a programmer sketches the shape of the input to the query as a hierarchy. But the programmer could make a mistake in specifying the hierarchy and it takes programmer time and effort to specify the hierarchy. A better solution is to automatically infer the hierarchy from a query. This thesis presents a system to infer a hierarchical input type for an SQL query. We consider two …

The Effects Of Fermented Vegetables On The Gut Microbiota For Prevention Of Cardiovascular Disease, Melissa Baron, Bin Zuo, Jianmin Chai, Jiangchao Zhao, Alireza Jahan-Mihan, Judy Ochrietor, Andrea Y. Arikawa

Animal Science Faculty Publications and Presentations

This study investigated the impact of regular consumption of fermented vegetables (FVs) on inflammation and the composition of the gut microbiota in adults at increased risk for cardiovascular disease. Eighty-seven adults ages 35–64 were randomized into an FV group, who consumed 100 g FVs daily at least five times per week for eight weeks, or a usual diet (UD) group. Blood and stool samples were obtained before and after the intervention. Dependent samples t tests and adjusted linear models were used for within- and between-group comparisons. The mean age and body mass index of participants were 45 years and 30 …

Skimming Genomes For Systematics And Dna Barcodes Of Corals, Andrea M. Quattrini, Luke J. Mccartin, Erin E. Easton, Jeremy Horowitz, Herman H. Wirshing, Hailey Bowers, Kenneth Mitchell, María Del P. González-García, Makiri Sei, Catherine S. Mcfadden

School of Earth, Environmental, & Marine Sciences Faculty Publications

Numerous genomic methods developed over the past two decades have enabled the discovery and extraction of orthologous loci to help resolve phylogenetic relationships across various taxa and scales. Genome skimming (or low-coverage genome sequencing) is a promising method to not only extract high-copy loci but also 100s to 1000s of phylogenetically informative nuclear loci (e.g., ultraconserved elements [UCEs] and exons) from contemporary and museum samples. The subphylum Anthozoa, including important ecosystem engineers (e.g., stony corals, black corals, anemones, and octocorals) in the marine environment, is in critical need of phylogenetic resolution and thus might benefit from a genome-skimming approach. We …

Quantifying Image Quality In Aoslo Images Of Photoreceptors, Brea D. Brennan, Heather Heitkotter, Joseph Carroll, Sergey Tarima, Robert F. Cooper

Biostatistics Faculty Publications

The use of “quality” to describe the usefulness of an image is ubiquitous but is often subject to domain specific constraints. Despite its continued use as an imaging modality, adaptive optics scanning light ophthalmoscopy (AOSLO) lacks a dedicated metric for quantifying the quality of an image of photoreceptors. Here, we present an approach to evaluating image quality that extracts an estimate of the signal to noise ratio. We evaluated its performance in 528 images of photoreceptors from two AOSLOs, two modalities, and healthy or diseased retinas. The algorithm was compared to expert graders’ ratings of the images and previously published …

Gopher Tortoises In Protected Natural Areas: Effects Of Natural Area Characteristics On Populations, Taryn Lagor

Graduate Student Dissertations, Theses, Capstones, and Portfolios

The gopher tortoise (Gopherus polyphemus) is native to the Southeast region of the United States. The burrows it digs supports the survival and wellbeing of over 350 other species, with over 60 of those being other vertebrates, making it a keystone species. It is ranked threated to rare by differing organizations with the main threat throughout its entire natural range being habitat loss. The Florida Scrub is the natural habitat of Florida gopher tortoise populations and is one of the fastest declining ecosystems in Florida, particularly in South Florida, due to rapid urban development. Many of the remaining …

The Optimal Timing Of Abscisic Acid Treatment In Arabidopsis Under Drought And Salt Stress, Khelia Gihozo

Graduate Student Dissertations, Theses, Capstones, and Portfolios

As climate change intensifies, harsh environmental conditions, such as increased drought and salt levels, will pose significant challenges to agricultural productivity globally. It is important to develop strategies for plants to tolerate these adverse conditions. This study aims to investigate how well the timing of abscisic acid (ABA) treatment can promote resistance to salt and drought in Arabidopsis thaliana grown on Murashige and Skoog agar medium. The study evaluates both wild-type and transgenic lines overexpressing the DREB2A gene, a transcriptional activator involved in the stress response of plants. Plants were exposed to drought and salt stress as they matured. Followed …

Memo: Dataset And Methods For Robust Multimodal Retinal Image Registration With Large Or Small Vessel Density Differences, Chiao-Yi Wang, Faranguisse Kahki Sadrieh, Yi-Ting Shen, Shih-En Chen, Sarah Kim, Victoria Chen, Achyut Raghavendra, Dongyi Wang, Osamah Saeedi, Yang Tao

Biological and Agricultural Engineering Faculty Publications and Presentations

The measurement of retinal blood flow (RBF) in capillaries can provide a powerful biomarker for the early diagnosis and treatment of ocular diseases. However, no single modality can determine capillary flowrates with high precision. Combining erythrocyte-mediated angiography (EMA) with optical coherence tomography angiography (OCTA) has the potential to achieve this goal, as EMA can measure the absolute RBF of retinal microvasculature and OCTA can provide the structural images of capillaries. However, multimodal retinal image registration between these two modalities remains largely unexplored. To fill this gap, we establish MEMO, the first public multimodal EMA and OCTA retinal image dataset. …

The Dawn Of Advanced Collaborative Practices: Charting Transdisciplinary Synergies Through Thematic And Social Network Analysis Within Boise State's Grand Challenges Initiative, Eva Lorraine Gaudio

Boise State University Theses and Dissertations

The likelihood of academic collaboration is influenced by specific characteristics that vary across attributes and associations. For instance, social networks have been found to influence the adoption of evidence-based instructional practices and interdisciplinary research performance. This study examines research collaboration practices at a university to support initiatives in increasing interdisciplinary collaboration. Purpose: The study has three aims: 1) to characterize existing collaborative research practices under the university systems and policies in effect at the start of this project in a sample of faculty researchers; 2) to gain a better understanding of the historical network structure of research using collaborative grant …

The Functional Dynamics Of Bacterial Communities In Relation To Environmental Selection And Host Health In A Pitcher Plant Model System, Jessica Rae Bernardin

Boise State University Theses and Dissertations

Our research investigates the function and composition of microbial communities across various conditions, shedding light on microbial community dynamics and plant-microbe interactions. Despite the crucial role microbes play in Earth's ecosystems, many questions remain about how microbiomes function and their direct impact on host health.

The first chapter explores the links between bacterial community function and the growth of purple pitcher plants (Sarracenia purpurea). We introduced three distinct bacterial communities into sterile pitchers to assess their effects on plant health. Different bacterial functions influenced plant traits, with communities rich in decomposition and secondary metabolite production traits leading to significantly larger …

Bridging The Gap Between Molecular Components And Functional Electronic Chemical Sensing Devices With 2d Layered, Conductive Metal–Organic Frameworks, Emma Katherine Ambrogi

Dartmouth College Ph.D Dissertations

Layered, conductive framework materials are a class of materials with properties that make them ideal sensing materials in electronic chemical sensors. My thesis is focused on the development of these materials for electrochemical sensing of liquid phase analytes, and on understanding the material–analyte and material–electrode interfaces, and their self-assembly and deposition onto surfaces.

Chapter 1 provides a summary of the use of layered conductive metal–organic frameworks (MOFs) and covalent organic frameworks (COFs) in electronic chemical sensors, detailing the materials and sensor architectures employed, and the analytes detected. Relevant performance metrics are compared, and investigations into material–analyte interactions are highlighted.

Chapter …

Lucy Through The Years -- Temporal Trends In The Australopithecus Dentition, Olivia Ervin

Anthropology Undergraduate Honors Theses

Australopithecus afarensis, an extinct human ancestor (ca. 3.75 – 2.95 million years ago) first distinguished in 1978, has a dense fossil record. Until recently, A. afarensis fossils were primarily known from two locations, Laetoli, Tanzania, and Hadar, Ethiopia, that are approximately 1750 kilometers apart. Additionally, there is no temporal overlap between the sites; fossils from Laetoli are older than 3.5 Ma and those from Hadar stretch from 3.4 – 3.0 Ma. For some tooth positions, the Laetoli and Hadar fossils subtly differ in size and shape. Previous research indicated that some of these differences could be attributable to evolutionary change, …

Adhd Knowledge: Support For Current Measures And Connections To Stigma And Intervention, Megan E. Golson

All Graduate Theses and Dissertations, Fall 2023 to Present

Many children with attention-deficit/hyperactivity disorder (ADHD) may be at-risk for social, educational, and daily functioning challenges. Identifying ADHD and beginning intervention as early as possible improves outcomes for children with ADHD. Research suggests that parents, teachers, and the general population have more favorable opinions about ADHD interventions the more they know about ADHD. While many measures of ADHD knowledge have been created to measure this, there is little research on the validity of these measures. Further, additional research is needed to better understand relation between ADHD knowledge and intervention favorability. The two studies in this dissertation aim to fill these …

Do Physical Activity, Diet And Sex Modify The Association Between Neurotrophin Single Nucleotide Polymorphisms And Insomnia?, Hector Leonardo Gonzalez

All Graduate Theses and Dissertations, Fall 2023 to Present

Sleep disturbance is common in older adults at prevalence rates ranging between 30 - 50% in the United States. Neurotrophins such as brain-derived neurotrophic factor (BDNF), play a role in sleep (Bachmann et al., 2012) as do lifestyle factors such as physical activity (Dolezal et al., 2017) and diet. This study examined the associations of selected single nucleotide polymorphisms or SNPs related to BDNF or its receptors and lifestyle factors of physical activity and diet, as well as their interactions on the risk for sleep disturbance in older adult males and females. This thesis examined existing data from the Cache …

Vectors And Vector Borne Disease: Models For The Spread Of Curly Top Disease And Culex Mosquito Abundance, Rachel M. (Frantz) Georges

All Graduate Theses and Dissertations, Fall 2023 to Present

Mathematical models are useful tools in managing infectious disease. When designed appropriately, these models can provide insight into disease incidence patterns and transmission rates. In this work, we present several models that provide information that is useful in monitoring diseases spread by insects.

In the first part of this dissertation, we present two models that predict disease incidence patterns for Curly Top disease (CT) in tomato crops. CT affects a wide variety of plants and is spread through the bite of the Beet Leafhopper. This disease is particularly devastating to tomato crops. When infected, tomato plants present with stunted growth …