Digital Commons Network^™

Hepatitis B, C Virus And Hiv Co-Infection Among Reported Female Cases In South Carolina, 2004 - 2011: An Epidemiological Analysis Of Pregnancy Outcomes, Afiba Manza-Azele Agovi

Theses and Dissertations

HIV, hepatitis B and C virus (HBV, HCV) are three of the most common blood-borne infections and they continue to be a major public health problem in the United States (US) and globally. It is not well understood if maternal infection with either HBV or HCV has an adverse impact on pregnancy outcomes as findings from previous studies have provided some mixed results. The overall goal of this study was to assess the risk of preterm birth, low birth weight (LBW), small for gestational age (SGA) and admission into neonatal intensive care unit (NICU) for babies born to HBV- and …

Antibiotic Usage In Relation To Resistant Bacterial Infections And Liver And Kidney Cancer Outcomes In South Carolina, Prea Thathiah

Theses and Dissertations

Antibiotics are one of the most beneficial discoveries in medicine and public health. However, the use, overuse, and misuse of these drugs have led to increases in antibiotic resistant bacterial infections (ARI). Furthermore, previous epidemiological studies have linked antibiotic use to breast cancer, but these studies have not included effects on metabolic organs, such as the liver and kidneys. This dissertation investigates the role of antibiotic use in infections and liver and kidney cancers in the state of South Carolina. Using ecological study methods and Poisson regression to determine relative risk ratios, it was found that antibiotic use is a …

Hand Pulling Following Mowing And Herbicide Treatments Increases Control Of Spotted Knapweed (Centaurea Stoebe), Neil W. Macdonald, Laurelin M. Martin, Corey K. Kapolka, Timothy F. Botting, Tami E. Brown

Open Access Publishing Support Funded Articles

Extensive areas in the upper Midwest have been invaded by spotted knapweed, and effective management strategies are required to reestablish native plant communities. We examined effects of mowing, mowing plus clopyralid, or mowing plus glyphosate in factorial combination with hand pulling and burning on knapweed abundances on a knapweed-infested site in western Michigan. We applied mowing and herbicide treatments in summer 2008, and seeded all plots with native grasses and forbs in spring 2009. We conducted the knapweed pulling treatment from 2009 to 2012 in July. The prescribed burn was conducted in April 2012. By 2012, hand pulling reduced adult …

Ecology Of A Declining Great Plains Fish, Fundulus Sciadicus, In The Missouri Ozarks, Gregory Travis Thompson

Masters Theses

"Anthropogenic habitat disturbances are of growing concern due to their impacts on native biota, especially in freshwater ecosystems. Damming, channelization, urbanization, wetland draining, and non-native fish introductions all play large roles in habitat homogeneity, fragmentation, and species competition. This has negative effects on native fish and invertebrate species. In the Midwestern United States, the plains topminnow (Fundulus sciadicus) has been declining across its range, to the point of becoming a species of special concern in Missouri. This is possibly due to a combination of the above anthropogenic habitat disturbances. To better understand the ecology of the plains topminnow …

Integrating Societal Perspectives And Values For Improved Stewardship Of A Coastal Ecosystem Engineer, Steven B. Scyphers, J. Steven Picou, Robert D. Brumbaugh, Sean P. Powers

University Faculty and Staff Publications

Oyster reefs provide coastal societies with a vast array of ecosystem services, but are also destructively harvested as an economically and culturally important fishery resource, exemplifying a complex social-ecological system (SES). Historically, societal demand for oysters has led to destructive and unsustainable levels of harvest, which coupled with multiple other stressors has placed oyster reefs among the most globally imperiled coastal habitats. However, more recent studies have demonstrated that large-scale restoration is possible and that healthy oyster populations can be sustained with effective governance and stewardship. However, both of these require significant societal support or financial investment. In our study, …

Great Crested Flycatcher (Myiarchus Crinitus) Nest-Site Selection And Nesting Success In Tree Cavities, Karl E. Miller

Florida Field Naturalist

No abstract provided.

Distribution Of Wildlife Rabies In Central Appalachia And Analysis Of Factors Influencing Human Exposure, Sara J. Reilly

Theses and Dissertations--Public Health (M.P.H. & Dr.P.H.)

Abstract Background: The rabies virus is a Lyssavirus of the family Rhabdoviridae which affects all mammals and causes progressive encephalomyelitis that is fatal in nearly one hundred percent of untreated cases. In the United States, wildlife act as the primary reservoir for rabies and prevention, surveillance, and control costs remain high. The purpose of this study is to understand the current distribution of wildlife rabies in Central Appalachia, as well as identify any demographic or geographic factors which may affect the risk of human exposure at the county level. Methods: A spatial statistical analysis using StatScan was performed to identify …

Exposure To Endocrine Disrupting Chemicals And Male Reproductive Health, Hueiwang Anna Jeng

Community & Environmental Health Faculty Publications

Endocrine disrupting chemicals (EDCs) can interfere with normal hormonal balance and may exert adverse consequences on humans. The male reproductive system may be susceptible to the effects of such environmental toxicants. This review discusses the recent progress in scientific data mainly from epidemiology studies on the associations between EDCs and male reproductive health and our understanding of possible mechanisms associated with the effects of EDCs on male reproductive health. Finally, the review provides recommendations on future research to enhance our understanding of EDCs and male reproductive health. The review highlights the need for (1) well-defined longitudinal epidemiology studies, with appropriately …

Evolution Of The Freshwater Sardinella, Sardinella Tawilis (Clupeiformes: Clupeidae), In Taal Lake, Philippines And Identification Of Iits Marine Sister-Species, Sardinella Hualiensis, Demian Willette, Kent E. Carpenter, Mudjekeewis Santos

Biological Sciences Faculty Publications

We identify the sister species of the world's only freshwater sardinella, Sardinella tawilis (Herre, 1927) of Taal Lake, Philippines as the morphologically-similar marine Taiwanese sardinella Sardinella hualiensis (Chu and Tsai, 1958). Evidence of incomplete lineage sorting and a species tree derived from three mitochondrial genes and one nuclear gene indicate that S. tawilis diverged from S. hualiensis in the late Pleistocene. Neutrality tests, mismatch distribution analysis, sequence diversity indices, and species tree analysis indicate populations of both species have long been stable and that the divergence between these two lineages occurred prior to the putative 18th century formation of Taal …

The Foraging Areas Of Attine Ants At The Firestone Reserve, Costa Rica, Elana A. Goldstein

Scripps Senior Theses

In tropical forest systems, attine ants are the dominant herbivores. They construct large nest structures that include foraging trails that extend to multiple plant sources throughout the forest. These foraging areas vary from nest to nest and they are highly dynamic over time and season changes. It was expected that characteristics of both the nest structure and the surrounding environment would affect the size of nest foraging areas. In this study, COMPASS survey software and ArcGIS were used to map the foraging trails and calculate the foraging areas of 12 attine ant nests located on the Firestone Reserve, over the …

Bioinformatics Systems And Mathematical Models For Improved Understanding Of Malaria Transmission, Control, And Elimination, Samson Sifael Kiware

Dissertations (1934 -)

The leading malaria vector control strategies (i.e., long-lasting insecticidal nets and indoor residual spraying) can reduce indoor transmission, but these tools alone are insufficient to eliminate it. Strategies that target adult mosquitoes when they feed on humans or animals outdoors or target mosquito immature stages are also needed to achieve malaria elimination. Improved data systems for integrating

diverse experimental observations and research groups, as well as process-explicit mathematical models for evaluating them are both essential to achieving these goals.

We have developed a generic schema and data repositories for the studies of malaria vectors that encompass a wide variety of …

Behavioural Ecology Of The Black-Flanked Rock-Wallaby (Petrogale Lateralis Lateralis): Refuge Importance In A Variable Environment, Craig Pentland

Theses: Doctorates and Masters

The black-flanked rock-wallaby (Petrogale lateralis lateralis) has suffered a significant decline in its distribution in Western Australia. This has been attributed to introduced predators (predominantly the red fox) and herbivores, fire, and habitat destruction due to clearing. Although since 2001 the Department of Environment and Conservation (DEC) had begun to reintroduce this species back into its former range, little was known of the behavioural ecology of this species. Fox control in the 1980s and 1990s resulted in population increases of rock-wallabies on several reserves in the central wheatbelt of WA. However, recently these populations have rapidly declined despite continuing fox …

Dgge Analysis Of Denitrifying Bacterial Diversity In Response To Nutrients And Oil Contamination In Salt Marshes, Catalina Restrepo

LSU Master's Theses

Salt marsh ecosystems located at the Mississippi River delta are exposed to high levels of point and nonpoint sources of nutrients such as nitrate-based fertilizers and to oil spills in the Gulf of Mexico. However, there is little information on the effects of eutrophication and oil contamination on the bacterial diversity of denitrifying bacteria in salt marsh sediments of coastal Louisiana. The effects of excess nutrients on the bacterial diversity of denitrifiers were analyzed by injecting sediment cores with high concentrations of nitrate (100μM NO3- and 20,000μM NO3-) and carbon (0% and 20% C concentration from the original sample). After …

Preliminary Multifactorial Analysis Of Parkinson's Disease, Max James Miller

LSU Master's Theses

Neurodegenerative disorders affect millions of Americans every year. Incidence increases as the human population ages. Parkinson’s Disease, a neurodegenerative disorder in the dopaminergic system of the basal ganglia, causes deterioration of movement as the disease progresses. Researchers have attempted to figure out what causes PD and are currently examining it as an environmental disease. This study examined PD as an environmental disease using a multifactorial approach. Methods included 1) utilization of hospital and mortality records in order to investigate a relationship between occupation and PD 2) using ArcGIS 10.2 technology to examine the spatial components of PD 3) conducting Chi-Square …

The Role Of Surface Chemistry In The Toxicity Of Manufactured Cerium Dioxide Nanomaterials To Caenorhabditis Elegans, Emily Kay Oostveen

Theses and Dissertations--Plant and Soil Sciences

Manufactured CeO₂ nanomaterials (CeO₂-MNMs) are used for a wide variety of applications including diesel fuel additives and chemical/mechanical planarization media. To test the effects of CeO₂-MNM surface coating charge on to model organism Caenorhabditis elegans, we synthesized 4 nm CeO₂ with cationic (DEAE-), anionic (CM-), and neutral (DEX) coatings. In L3 nematodes exposed for 24 hours, DEAE-CeO₂ induced lethality at lower concentrations than CM- or DEX-CeO₂. Feeding slightly decreased CeO₂ toxicity, regardless of coating. In L2 nematodes exposed for 48 hours with feeding, DEAE-CeO₂ caused lethality at the …

Water Resources And The Historic Wells Of Barbuda: Tradition, Heritage And Hope For A Sustainable Future, Rebecca Boger, Sophia Perdikaris, Amy E. Potter, John Mussington, Reginald Murphy, Louise Thomas, Calvin Gore, Dwight Finch

Department of Anthropology: Faculty Publications

The island of Barbuda has a relatively unique history, land tenure and geography. Unlike its Caribbean counterparts, the island is not suited to large-scale agriculture due to its arid climate and relatively thin soils. Instead, the enslaved and eventually free people of Barbuda developed a complex herding ecology centered on common land ownership. As a result, carefully designed historic wells are strategically located around the island. With the challenges brought about by climate change, an interdisciplinary, international team led by the Barbuda Research Complex is investigating the state of existing water and food resources and examining how the availability and …

Ecology Of The Squirrel Treefrog (Hyla Squirella) In Southern Arkansas, M. B. Connior, T. Fulmer, C. T. Mcallister, S. E. Trauth, C. R. Bursey

Journal of the Arkansas Academy of Science

We conducted an ecological study of the Squirrel Treefrog, Hyla squirella near El Dorado, Union Co., Arkansas from May-Oct. 2013. We extended the known distribution by ~2 km and documented the first breeding occurring on 28 May and the first transformation of juveniles on 27 Aug. Three endoparasites were documented: Opalina sp., Nyctotherus cordiformis, and Physaloptera sp. larvae. We also provide information on endoparasites of Florida H. squirella as well as a summary of helminths of this frog.

Comparative Study Of Helminth Parasites Of The Many-Ribbed Salamander, Eurycea Multiplicata And Oklahoma Salamander, Eurycea Tynerensis (Caudata: Plethodontidae), From Arkansas And Oklahoma, A, C. T. Mcallister, M. B. Connior, C. R. Bursey, H. W. Robison

Journal of the Arkansas Academy of Science

Ninety many-ribbed salamanders, Eurycea multiplicata and 135 Oklahoma salamanders, Eurycea tynerensis were collected between April 2010 and April 2014 from 14 counties of Arkansas and McCurtain County, Oklahoma (E. multiplicata only) and examined for helminth parasites. Twelve (13%) E. multiplicata were infected, including two (2%) each with Brachycoelium salamandrae, Bothriocephalus rarus, Batracholandros magnavulvaris, Cosmocercoides variabilis, and Omeia papillocauda, and one (1%) each with an oligacanthorhynchid cystacanth and Fessisentis vancleavei. Forty-one (30%) of the E. tynerensis were infected, including seven (5%) with Gorgoderina tenua, two (1%) each with Phyllodistomum solidum and cyclophyllidean tapeworm cysticerci, one (0.7%) with Cylindrotaenia americana, six (3%) …

Ecology And Engagement: The Importance Of Direct Experience Of Nature In Culture And Scholarship, Chris Baldwin Humm

Graduate Student Theses, Dissertations, & Professional Papers

Our culture is becoming increasingly detached from nature. We spend more of our time indoors than ever. While the indoors may offer certain benefits, it’s becoming increasingly clear that our alienation from nature has serious downsides. We depend upon nature for our physical, mental, and spiritual well-being and without it. The opposite of detachment is engagement. Engagement involves direct experience of nature, whether in national parks, wilderness, backyard woods, or unkempt vacant lots. If we want to reverse the problems associated with detachment, we need to encourage engaged alternatives. Only through a culture of engagement, one that recognizes and values …

Stock Enhancement Of Macrobrachium Rosenbergii (Giant Freshwater Prawns) Inferred By Molecular Genetics And Ecological Studies / Mohd Azwan Bin Jaafar, Mohd Azwan Jaafar

Student Works (2010-2019)

The freshwater prawn Macrobrachium rosenbergii or locally known as “Udang galah” in Malaysia is ranked as the sixth largest aquaculture species in Asia based on volume. Overharvesting of this species has caused it depletion in all the river line systems in the whole world including Malaysia. A stock enhancement program has been done by the Malaysian Department of Fisheries to fulfil the demand for this prawn. The objective of this study was to determine the productivity success of stock enhancement using 18 microsatellite (Type I and Type II) and mitochondrial DNA markers (mtDNA). In order to evaluate the productivity success, …

Predicting Germination Of Medicago Sativa And Onobrychis Viciifolia Seeds By Using Image Analysis, Behnam Behtari, Martin De Luis, Adel Dabbagh Mohammadi Nasab

Turkish Journal of Agriculture and Forestry

Image analysis is an accessible method that can convert qualitative variables to quantitative ones. Computer imaging has been used in seed biology in various ways, including seed vigor testing and seed identification. In this paper, the seeds of 2 species, Medicago sativa and Onobrychis viciifolia, were studied. Laboratory tests and a computerized experiment were conducted to evaluate the effects of accelerated aging on the seed vigor of both species. We measured the rate of germination using a factorial and completely randomized design, with 10 treatment combinations replicated 3 times. The main factors were accelerated aging (6, 12, 18, 24, and …

Fundamental Principles Of Law For The Anthropocene?, Nicholas A. Robinson

Elisabeth Haub School of Law Faculty Publications

A wide array of questions arises from global change to confront environmental law. The IPCC has examined social decisions affecting the climate in the design of human settlements, transport systems, industrialisation, agriculture and silviculture, waste management, provisions for energy, and virtually all other socio-economic dimensions of human life. The AR-5, too, cannot avoid raising issues of human ethics and values at local and regional scales. Such issues reach environmental policy and law directly. The IPCC’s AR-5 report furthers widespread public debate about the human dimensions of climate change, and how social theory relates to environmental change. Already, climate change has …

The Efficacy And Safety Of The Human Papillomavirus Vaccine, Gail Tessler

The Science Journal of the Lander College of Arts and Sciences

The HPV virus is said to be the cause of many infections, warts, and cancers. In addition to the fact that the treatment for HPV is not always successful, not every individual knows that s/he is infected and is very likely to infect his or her partner, too. This is one factor that explains why 14 million people each year in America alone contract HPV and makes cervical cancer so threatening to many people worldwide. In light of this and the known dangers of cervical, anal, vaginal and penile cancers, the HPV vaccine was created to prevent an infection of …

Multimodel Simulations Of Forest Harvesting Effects On Long-Term Productivity And Cn Cycling In Aspen Forests, Fugui Wang, David J. Mladenoff, Jodi A. Forrester, Juan A. Blanco, Robert M. Scheller, Scott D. Peckham, Cindy Keough, Melissa S. Lucash

Environmental Science and Management Faculty Publications and Presentations

The effects of forest management on soil carbon (C) and nitrogen (N) dynamics vary by harvest type and species. We simulated long-term effects of bole-only harvesting of aspen (Populus tremuloides) on stand productivity and interaction of CN cycles with a multiple model approach. Five models, Biome-BGC, CENTURY, FORECAST, LANDIS-II with Century-based soil dynamics, and PnET-CN, were run for 350 years with seven harvesting events on nutrient-poor, sandy soils representing northwestern Wisconsin, USA. Twenty CN state and flux variables were summarized from the models' outputs, and statistically analyzed using ordination and variance analysis methods. The multiple models' averages suggest that bole-only …

Getting Plant Conservation Right (Or Not): The Case Of The United States, Kayri Havens, Andrea T. Kramer, Edward O. Guerrant Jr.

Environmental Science and Management Faculty Publications and Presentations

Effective plant conservation includes addressing basic needs such as information about species distribution and rarity; research, management, education, and training capacity to mitigate threats facing threatened species; policy and funding to support continued capacity and conservation; and, ultimately, a public that understands and supports the importance of plants and the need for their conservation. Coordination of plant conservation efforts is also needed to ensure that resources and expertise are used in a strategic, efficient, and effective manner.We argue that no country is currently getting plant conservation right; plants are becoming increasingly rare around the world. Plants are often not fully …

Improving The Representation Of Roots In Terrestrial Models, Erica A.H. Smithwick, Melissa S. Lucash, M. Luke Mccormack, Gajan Sivandran

Environmental Science and Management Faculty Publications and Presentations

Root biomass, root production and lifespan, and root-mycorrhizal interactions govern soil carbon fluxes and resource uptake and are critical components of terrestrial models. However, limitations in data and confusions over terminology, together with a strong dependence on a small set of conceptual frameworks, have limited the exploration of root function in terrestrial models. We review the key root processes of interest to both field ecologists and modelers including root classification, production, turnover, biomass, resource uptake, and depth distribution to ask (1) what are contemporary approaches for modeling roots in terrestrial models? and (2) can these approaches be improved via recent …

Analysis Of Populus Tremuloides Clonal Variation And Delineation In The Ottawa National Forest, Kristina N. Flesher

Dissertations, Master's Theses and Master's Reports - Open

The technique of delineating Populus tremuloides (Michx.) clonal colonies based on morphology and phenology has been utilized in many studies and forestry applications since the 1950s. Recently, the availability and robustness of molecular markers has challenged the validity of such approaches for accurate clonal identification. However, genetically sampling an entire stand is largely impractical or impossible. For that reason, it is often necessary to delineate putative genet boundaries for a more selective approach when genetically analyzing a clonal population. Here I re-evaluated the usefulness of phenotypic delineation by: (1) genetically identifying clonal colonies using nuclear microsatellite markers, (2) assessing phenotypic …

Semantics In Support Of Biodiversity Knowledge Discovery: An Introduction To The Biological Collections Ontology And Related Ontologies, Ramona L. Walls, John Deck, Robert Guralnick, Steve Baskauf, Reed Beaman, Stanley Blum, Shaun Bowers

Computer Science Faculty Scholarship

The study of biodiversity spans many disciplines and includes data pertaining to species distributions and abundances, genetic sequences, trait measurements, and ecological niches, complemented by information on collection and measurement protocols. A review of the current landscape of metadata standards and ontologies in biodiversity science suggests that existing standards such as the Darwin Core terminology are inadequate for describing biodiversity data in a semantically meaningful and computationally useful way. Existing ontologies, such as the Gene Ontology and others in the Open Biological and Biomedical Ontologies (OBO) Foundry library, provide a semantic structure but lack many of the necessary terms to …

Multicenter Evaluation Of Computer Automated Versus Traditional Surveillance Of Hospital-Acquired Bloodstream Infections, Michael Y. Lin, Keith F. Woeltje, Yosef M. Khan, Bala Hota, Joshua A. Doherty, Tara B. Borlawsky, Kurt Stevenson, Scott K. Fridkin, Robert A. Weinstein, William E. Trick

Open Access Publications

No abstract provided.

Identification Of A Fourth Haplotype Of Bactericera Cockerelli (Hemiptera: Triozidae) In The United States, Kylie D. Swisher, Donald C. Henne, James M. Crosslin

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

The potato psyllid, Bactericera cockerelli (Sulc) (Hemiptera: Triozidae), is a pest of potato and other solanaceous crops in North and Central America and New Zealand. Previous genotyping studies have demonstrated the presence of three different haplotypes of B. cockerelli in the United States corresponding to three geographical regions: Central,Western, and Northwestern. These studies utilized psyllids collected in the western and central United States between 1998 and 2011. In an effort to further genotype potato psyllids collected in the 2012 growing season, a fourth B. cockerelli haplotype was discovered corresponding to the Southwestern United States geographical region. High-resolution melting analyses identified …