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The Entrance As A Complex Ecotone In A Neotropical Cave, Xavier Prous, Rodrigo Lopes Ferreira, Claudia Maria Jacobi

International Journal of Speleology

Cave entrances are transition zones with intermediate characteristics between epigean environments, which bear lower environmental stability, and hypogean environments, with lower food resources. Associated to these interfaces there is a specific community, capable of exploiting its unique and intermediate characteristics. This work investigated this community in a Brazilian limnestone cave, identifying its arthropod species composition and spatial distribution, and exploring its relationships with climatic and structural environment characteristics and trophic relations. An ecotone zone was identified, with 55 species found only in the ecotone, 49 species were shared with the epigean community, 37 species with the hypogean community, and 14 …

Recurrent Evolution Of Melanism In South American Felids, Alexsandra Schneider, Corneliu Henegar, Kenneth Day, Devin Absher, Constanza Napolitano, Leandro Silveira, Victor A. David, Stephen J. O'Brien, Marilyn Menotti-Raymond, Gregory S. Barsh, Eduardo Eizirik

Biology Faculty Articles

Morphological variation in natural populations is a genomic test bed for studying the interface between molecular evolution and population genetics, but some of the most interesting questions involve non-model organisms that lack well annotated reference genomes. Many felid species exhibit polymorphism for melanism but the relative roles played by genetic drift, natural selection, and interspecies hybridization remain uncertain. We identify mutations of Agouti signaling protein (ASIP) or the Melanocortin 1 receptor (MC1R) as independent causes of melanism in three closely related South American species: the pampas cat (Leopardus colocolo), the kodkod (Leopardus guigna), and Geoffroy’s cat …

Sulfidic Spring In The Gypsum Karst System Of Monte Conca (Italy): Chemistry And Microbiological Evidences, Marianna Messina, Tiziana Grech, Fiorenzo Fiorenza, Alessandro Marlettta, Pietro Valenti, Salvatore Petralia

International Journal of Speleology

Monte Conca Cave is a karst system placed in Messinian evaporites, consisting of an active cave and a resurgence located on the massif of Monte Conca, Campofranco within the "Riserva Naturale Integrale di Monte Conca". A sulfidic spring is located in the terminal gallery of the cave. To characterize the physical and chemical parameters of the Monte Conca cave and of the sulfidic spring, air temperature, relative humidity, water pH, and concentrations of dissolved sulfides, nitrates and sulfates were monitored. The high sulfide consumption rate in the sulfidic spring, evaluated by a kinetic study, suggests that biotic consumption is dominant. …

Animals As Neighbours: The Past And Present Of Commensal Animals By Terry O'Connor, Derek Woods

The Goose

Review of Terry O'Connor's Animals as Neighbours: The Past and Present of Commensal Animals.

Environmental Disasters Data Management Workshop Report, Coastal Response Research Center

Coastal Response Research Center

The Environmental Disasters Data Management (EDDM) project seeks to foster communication between collectors, managers, and users of data within the scientific research community,

industry, NGOs, and government agencies, with a goal to identify and establish best practices for

orderly collection, storage, and retrieval. The Coastal Response Research Center (CRRC) is assisting NOAA’s Office of Response and Restoration (ORR) with

this effort. The objectives of the EDDM project are to:

• Engage the community of data users, data managers, and data collectors to foster a culture of applying consistent terms and concepts, data flow, and quality assurance and control;
• Provide oversight in …

Tractography Of The Spider Monkey (Ateles Geoffroyi) Corpus Callosum Using Diffusion Tensor Magnetic Resonance Imaging, D. Platas-Neri, S. Hidalgo-Tobón, B. De Celis Alonso, F. C-P De León, J. Muñoz-Delgado, Kimberley A. Phillips

Psychology Faculty Research

The objective of this research was to describe the organization, connectivity and microstructure of the corpus callosum of the spider monkey (Ateles geoffroyi). Non-invasive magnetic resonance imaging and diffusion-tensor imaging were obtained from three subjects using a 3T Philips scanner. We hypothesized that the arrangement of fibers in spider monkeys would be similar to that observed in other non-human primates. A repeated measure (n = 3) of fractional anisotropy values was obtained of each subject and for each callosal subdivision. Measurements of the diffusion properties of corpus callosum fibers exhibited a similar pattern to those reported in the …

Cluster Of Human Infections With Avian Influenza A (H7n9) Cases: A Temporal And Spatial Analysis, Yi Zhang, Zhixiong Shen, Chunna Ma, Chengsheng Jiang, Cindy Feng, Nivedita Shankar, Peng Yang, Wenjie Sun, Quanyi Wang

Marine Science

Objectives: This study aims to describe the spatial and temporal characteristics of human infections with H7N9 virus in China using data from February 2013 to March 2014 from the websites of every province’s Population and Family Planning Commission. Methods: A human infection with H7N9 virus dataset was summarized by county to analyze its spatial clustering, and by date of illness onset to analyze its space-time clustering using the ESRI® Geographic Information System (GIS) software ArcMap™ 10.1 and SatScan. Results: Based on active surveillance data, the distribution map of H7N9 cases shows that compared to the rest of China, the areas …

Biomarkers Of Animal Health: Integrating Nutritional Ecology, Endocrine Ecophysiology, Ecoimmunology, And Geospatial Ecology, Robin Warne, Glenn Proudfoot, Erica Crespi

Publications

Diverse biomarkers including stable isotope, hormonal, and ecoimmunological assays are powerful tools to assess animal condition. However, an integrative approach is necessary to provide the context essential to understanding how biomarkers reveal animal health in varied ecological conditions. A barrier to such integration is a general lack of awareness of how shared extraction methods from across fields can provide material from the same animal tissues for diverse biomarker assays. In addition, the use of shared methods for extracting differing tissue fractions can also provide biomarkers for how animal health varies across time. Specifically, no study has explicitly illustrated the depth …

Evolution And Ecology Of Two Iconic Australian Clades: The Meliphagidae (Birds) And The Hakeinae (Plants), Eliot Trimarchi Miller

Dissertations

The first part of this dissertation explores the evolution of two iconic groups of species through Australian climate space: the Meliphagidae, or honeyeaters, which are primarily nectar-feeding birds, and the Hakeinae, a section of the plant family Proteaceae. Both groups are inferred to have had their origins in Gondwanan rainforests that were widespread across Australia 45 million years ago and then diversified into more arid environments as the continent’s climate became more arid. Accordingly, dry environments are inhabited by closely related (phylogenetically clustered) sets of species, although, in contrast to the honeyeaters, Hakeinae communities are characterized by more localized diversification. …

Drift Algae In New Haven Harbor And Impacts On Benthic Communities, Roman Zajac, Andrea Mccarthy

Biology and Environmental Science Faculty Publications

In 2009 the University of New Haven initiated studies to develop a contemporary database and assessment of the benthic ecology of New Haven Harbor. Previous studies were last conducted in the 1970s and 1980s (e.g. McCusker, and Bosworth 1979, 1981, Rhoads and Germano 1982). Benthic populations and communities are excellent indicators of environmental conditions and are regularly used for environmental assessment in estuarine and coastal waters (e.g. Pearson and Rosenberg 1978, Rhoads et al. 1978, Zajac and Whitlatch 2001, Mangi 2003). Given the inherent ability of the benthos to integrate sediment and water quality, many environmental indicators and indices to …

Volume 1, Chapter 5-2: Ecophysiology Of Development: Spore Germination, Janice M. Glime

Bryophyte Ecology Subchapters

No abstract provided.

Volume 2, Chapter 11-2: Aquatic Insects: Bryophyte Roles As Habitats, Janice M. Glime

Bryophyte Ecology Subchapters

No abstract provided.

Volume 2, Chapter 11-6: Aquatic Insects: Hemimetabolous Insects - Plecoptera, Janice M. Glime

Bryophyte Ecology Subchapters

No abstract provided.

Volume 2, Chapter 11-5: Aquatic Insects: Hemimetabola - Odonata, Janice M. Glime

Bryophyte Ecology Subchapters

No abstract provided.

Volume 2, Chapter 11-9: Aquatic Insects: Holometabola - Coleoptera, Suborder Adephaga, Janice M. Glime

Bryophyte Ecology Subchapters

No abstract provided.

Volume 2, Chapter 11-13a: Aquatic Insects: Holometabola - Diptera, Suborder Nematocera, Janice M. Glime

Bryophyte Ecology Subchapters

No abstract provided.

Volume 2, Chapter 11-11: Aquatic Insects: Holometabola - Trichoptera, Suborder Annulipalpia, Janice M. Glime

Bryophyte Ecology Subchapters

No abstract provided.

The Role Of The Primary School Principal In Developing Student Leadership, Gregory Hine, Shane D. Lavery

Education Papers and Journal Articles

The development of student leadership potential is an important issue to investigate (Archard, 2009; Hine, 2013; McNae, 2011). Yet to date, little research efforts have focussed on student leadership development programs within primary schools (K - 6). This research examined three aspects of student leadership within eight Catholic primary schools in metropolitan Perth, Western Australia. These aspects included the principals’ understanding of the term ‘student leadership’, their perception of the most appropriate form of student leadership in Catholic schools, and how they envisaged their role within a student leadership program. Qualitative data were collected through the exercise of semi-structured interviews …

A Bird In The Bush: Dillon Ripley, Sálim Ali And The Transformation Of Ornithology In Sri Lanka, Arjun Guneratne

Faculty Publications

No abstract provided.

The Uncertain Climate Footprint Of Wetlands Under Human Pressure, Ana Maria Roxana Petrescu, Annalea Lohila, Juha-Pekka Tuovinen, Dennis D. Baldocchi, Ankur R. Desai, Nigel T. Roulet, Timo Vesala, Albertus Johannes Dolman, Walter C. Oechel, Barbara Marcolla, Thomas Friborg, Janne Rinne, Jaclyn Hatala Matthes, Lutz Merbold, Ana Meijide, Gerard Kiely, Matteo Sottocornola, Torsten Sachs, Donatella Zona, Andrej Varlagin, Derrick Y.F. Lai, Elmar Veenendaal, Frans-Jan W. Parmentier, Ute Skiba, Magnus Land, Arjan Hensen, Jacobus Van Huissteden, Lawrence B. Flanagan, Narasinha J. Shurpali, Thomas Grünwald, Elyn R. Humphreys, Marcin Jackowicz-Korczynski, Mika A. Aurela, Tuomas Laurila, Carsten Grüning, Chiara A.R. Corradi, Arina P. Schrier-Uijl, Torben R. Christensen, Mikkel P. Tamstorf, Mikhail Mastepanov, Pertti J. Martikainen, Shashi Verma, Christian Bernhofer, Alessandro Cescatti

School of Natural Resources: Faculty Publications

Significant climate risks are associated with a positive carbon–temperature feedback in northern latitude carbon-rich ecosystems,making an accurate analysis of human impacts on the net greenhouse gas balance of wetlands a priority. Here, we provide a coherent assessment of the climate footprint of a network of wetland sites based on simultaneous and quasi-continuous ecosystem observations of CO₂ and CH₄ fluxes. Experimental areas are located both in natural and in managed wetlands and cover a wide range of climatic regions, ecosystem types, and management practices. Based on direct observations we predict that sustained CH₄ emissions in natural ecosystems are …

Identification Of Eastern United States Reticulitermes Termite Species Via Pcr-Rflp, Assessed Using Training And Test Data, Ryan C. Garrick, Benjamin D. Collins, Rachel N. Yi, Rodney J. Dyer, Chaz Hyseni

Biology Publications

Reticulitermes termites play key roles in dead wood decomposition and nutrient cycling in forests. They also damage man-made structures, resulting in considerable economic loss. In the eastern United States, five species (R. flavipes, R. virginicus, R. nelsonae, R. hageni and R. malletei) have overlapping ranges and are difficult to distinguish morphologically. Here we present a molecular tool for species identification. It is based on polymerase chain reaction (PCR) amplification of a section of the mitochondrial cytochrome oxidase subunit II gene, followed by a three-enzyme restriction fragment length polymorphism (RFLP) assay, with banding patterns resolved via agarose gel electrophoresis. The assay …

A Cultural Resources Survey Of Texas Eastern Transmission Lps Phase 1 Pipeline Anomaly Repairs On The Petr To Tivo Segment Of Line 16 In Refugio And Aransas Counties, Texas, Charles E. Bludau Jr., Tony Scott

Index of Texas Archaeology: Open Access Gray Literature from the Lone Star State

On behalf of Texas Eastern Transmission, LP and Edge Engineering and Science, LLC., HRA Gray & Pape, LLC, of Houston, Texas, has completed a 100% pedestrian cultural resources survey and limited shovel testing of an estimated 4.5 kilometers (2.8 miles) of linear area in Refugio and Aransas Counties, Texas. Texas Eastern has identified several locations along the PETR to TIVO Segment of Line 16 that require replacement of aging pipe. One of the areas requiring maintenance work is identified as “Phase 1”, for which the archaeological survey was completed in May of 2015.

The Lead Federal Agency has been identified …

A Cultural Resources Survey Of Texas Eastern Transmission Lps Phase 2 And Phase 3 Pipeline Anomaly Repairs On The Petr To Tivo Segment Of Line 16 In Refugio And Aransas Counties, Texas, Charles E. Bludau

Index of Texas Archaeology: Open Access Gray Literature from the Lone Star State

On behalf of Texas Eastern Transmission, LP and Edge Engineering and Science, LLC., HRA Gray & Pape, LLC, of Houston, Texas, has completed a 100% pedestrian cultural resources survey and limited shovel testing of an estimated 7.84 kilometers (4.87 miles) of linear area in Refugio and Aransas Counties, Texas. Texas Eastern has identified several locations along the PETR to TIVO Segment of Line 16 that require replacement of aging pipe. Two of the areas requiring maintenance work are identified as “Phase 2” and “Phase 3” for which the archaeological survey was completed in May of 2015.

The Lead Federal Agency …

A Cultural Resources Survey For The Donna Independent School District’S Aquatic Center And Walking Trail Project, Donna, Hidalgo County, Texas, Herbert G. Uecker, James E. Warren

Index of Texas Archaeology: Open Access Gray Literature from the Lone Star State

In late April, 2015, Archaeology Consultants, Inc., performed a cultural resources survey for the Donna Independent School District Aquatic Center and Walking Trail Project in Hidalgo County, Texas. About 6.65 acres was surveyed. The location of the project area within public school district property and within a region known to contain numerous archeological sites prompted the Texas Historical Commission to recommend the survey for compliance with the Antiquities Code of Texas. The Commission issued Texas Antiquities Permit 7163 for the survey.

The survey included a search of the Commission’s Texas Archeological Sites Atlas for previous surveys and recorded archaeological sites …

Mercury Speciation, Retention, And Abundance Of Genes Involved With Mercury Methylation In Fertilized Salt Marsh Sediments, Caroline Collins

Biology Honors Papers

Mercury (Hg) is a global pollutant which exists in both aquatic and terrestrial systems in three main forms including elemental Hg, ionic mercury, and methyl mercury, (MeHg), and Hg cycling plays an important role in ecosystems. Great Sippewisset Marsh, (GSM) in Falmouth MA has been chronically treated with fertilizer that contains heavy metals such as Hg in varying concentrations since the early 1970s and provides for an excellent location to study Hg contamination. The overall goal of this study is to analyze the key geochemical and microbial conditions that lead to MeHg production in the presence of the applied fertilizer. …

Investigation Of Fatty Acid Composition And Trans Fatty Acid Formation In Extracted Oils From French-Fried Potatoes And Classification Of Samples Using Chemometric Approaches, Eli̇f Yildirim, Ömer Sai̇d Toker, Safa Karaman, Ahmed Kayacier, Mahmut Doğan

Turkish Journal of Agriculture and Forestry

The present study investigates fatty acid composition and trans fatty acid formation in oils extracted from French-fried potatoes, which were produced in the laboratory and collected from different restaurants. Potatoes were fried at 180 °C at different frying periods (1, 7, 13, 19, 25, and 31 min) and the fatty acid composition of the extracted oils was determined. Principal component analysis and hierarchical cluster analysis were used to characterize and classify the samples. Four major fatty acids were identified in the samples, namely palmitic acid, stearic acid, oleic acid, and linoleic acid. Linolelaidic acid (C18:2 trans) was detected in the …

Spider Assemblages And Dynamics On A Seasonal Island In The Pripyat River, Belarus, Izabela Hajdamowicz, Lucyna Pilacka, Wlodzimierz Meissner

Turkish Journal of Zoology

Spider assemblages on a seasonal river meadow island were studied in spring 2006 and 2007. Samples were collected with a set of 20-30 pitfall traps once every 5 days. Altogether, 1179 spiders belonging to 30 species were collected. There were 5 constant dominant species: medium-sized wandering Pardosa prativaga, and small-sized air colonizers Oedothorax retusus, Erigone dentipalpis, Oedothorax fuscus, and Pachygnatha degeeri. The relatively low species diversity was higher in 2007 and grew throughout the season with the lowering of the water level. The total turnover of species involved the least abundant species (below 1% of the total), mainly Linyphiidae. Abundance …

Age Structure Of Hemidactylus Turcicus (L., 1758) (Sauria: Gekkonidae) From Southwestern Anatolia (Muğla, Turkey), Betül Kanat, Cemal Varol Tok

Turkish Journal of Zoology

In this study, a total of 36 (12♂♂, 18♀♀, 6 juveniles) Hemidactylus turcicus specimens, caught in the vicinity of Muğla (Turkey) between 2006 and 2011, were evaluated using the skeletochronology method. The mean snout-to-vent length (SVL) was measured as 28.45 ± 1.92 mm for juveniles, 50.53 ± 1.06 mm for males, and 51.1 ± 0.75 mm for females. When the cross-sections were examined, the age range was determined to be 4-8 years in the males and 4-9 years in the females. Individuals reach sexual maturity in 2-3 years. The maximum age was calculated as 9 years for a female. It …

Composition And Seasonal Variation Of Epigeic Arthropods In Field Margins Of Nw Portugal, Fátima Cristina Paulino Simão, Miguel Angel Carretero, Maria José Aires Do Amaral, Amadeu Mortágua Velho Da Maia Soares, Eduardo Mateos

Turkish Journal of Zoology

Field margins act as shelters for different arthropod taxa in agricultural fields. Several factors may promote seasonal changes in arthropod communities, especially in regions with marked seasonality, such as Mediterranean areas. Epigeic arthropods were sampled from the margins of fields located in northwestern Portugal during 2 contrasting seasons, spring and autumn. Organisms were identified to family or order level and seasonal variation in arthropod communities was evaluated. Abundance, group richness, and feeding guild parameters were affected by sampling season, with both abundance and richness being higher in spring. Of the groups captured in both seasons, most evidenced either higher abundance …

First Records Of The Sea Anemones Stichodactyla Tapetum Andstichodactyla Haddoni (Anthozoa: Actiniaria: Stichodactylidae)From The Southeast Of Iran, Chabahar (Sea Of Oman), Gilan Attaran Fariman, Pegah Javid

Turkish Journal of Zoology

Sea anemones (order Actiniaria) are among the most widespread invertebrates in the tropical waters. The anthozoans Stichodactyla haddoni (Saville-Kent, 1893) and Stichodactyla tapetum (Hemprich and Ehrenberg in Ehrenberg, 1834) (family Stichodactylidae) were reported for the first time from the southeastern coast of Iran, Chabahar Bay, Tiss zone. The specimens of S. haddoni and S. tapetum were collected by hand from the intertidal zone of sand and rock substrates in April 2012. The samples characteristics were morphologically studied in the field and laboratory. This study presents a new locality record and information about S. haddoni and S. tapetum found in this …