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Eicompare: Comparing Ecological Inference Estimates Across Ei And Ei:Rc, Loren Collingwood, Kassra Oskooii, Sergio Garcia-Rios, Matt Barreto

The R Journal

Social scientists and statisticians often use aggregate data to predict individual-level behavior because the latter are not always available. Various statistical techniques have been developed to make inferences from one level (e.g., precinct) to another level (e.g., individual voter) that minimize errors associated with ecological inference. While ecological inference has been shown to be highly problematic in a wide array of scientific fields, many political scientists and analysis employ the techniques when studying voting patterns. Indeed, federal voting rights lawsuits now require such an analysis, yet expert reports are not consistent in which type of ecological inference is used. This …

Circadian And Circatidal Rhythms Of Protein Abundance In The Intertidal Mussel Mytilus Californianus, Cory Elowe

Master's Theses

The intertidal zone is a dynamic environment that fluctuates with the 12.4-h tidal and 24-h light/dark cycle to predictably alter food availability, temperature, air exposure, wave action, oxygen partial pressure, and osmotic conditions. Intertidal sessile bivalves exhibit behavioral or physiological changes to minimize the persistent challenges of fluctuating environmental conditions, such as adjusting gaping behavior and heart rate. At the cellular level, transcriptomic studies on mussels’ baseline circadian and circatidal rhythms have determined that the circadian rhythm is the dominant transcriptional rhythm. However, as proteins reflect the basic molecular phenotype of an organism and their abundance may differ greatly from …

Isolation And Characterization Of Acidobacterium Ailaaui Sp. Nov., A Novel Member Of Acidobacteria Subdivision 1, From A Geothermally Heated Hawaiian Microbial Mat, Marisa R. Myers, G. M. King

Faculty Publications

© 2016 IUMS. A novel member of Acidobacteria was isolated from a microbial mat growing on a geothermally heated dead tree trunk in Hawai'i Volcanoes National Park (HI, USA). The rod-shaped, Gramnegative capsulated cells of strain PMMR2T were non-motile and catalase and oxidase negative. Growth occurred aerobically from 15 to 55 °C (optimum, 40 °C) and at pH values from 4.5 to 7.0 (optimum, 6.5). A limited range of sugars and organic acids supported growth. However, results of a genomic analysis suggested that various polysaccharides might be hydrolysed as carbon sources, and evidence for pectin degradation was observed in liquid …

The Spatial Ecology Of The Eastern Box Turtle (Terrapene Carolina Carolina) In A Fragmented Landscape In Southeast Tennessee, Hamilton County, Mark Dillard

Masters Theses and Doctoral Dissertations

The landscape throughout the range of the Eastern Box turtle (Terrapene carolina carolina) has been altered significantly since the late 1880s by habitat fragmentation. In this study, the spatial ecology and seasonal movement patterns of the Eastern Box turtle in contrasting habitat types are investigated. Eastern Box turtles had home ranges that averaged (mean = 3.77 ± 2.82 ha, minimum convex polygon) in size among individuals. There was no significant difference between mean annual home range size and movement patterns between males and females; however, home range size for male turtles was larger during the summer versus spring activity season …

Marine Ecoregion And Deepwater Horizon Oil Spill Affect Recruitment And Population Structure Of A Salt Marsh Snail, Steven C. Pennings, Scott Zengel, Jacob Oehrig, Merryl Alber, T. Dale Bishop, Donald R. Deis, Donna Devlin, A. Randall Hughes, John J. Hutchens, Whitney M. Kiehn, Caroline R. Mcfarlin, Clay L. Montague, Sean Powers, C. Edward Proffitt, Nicolle Rutherford, Camille L. Stagg, Keith Walters

Biology

Marine species with planktonic larvae often have high spatial and temporal variation in recruitment that leads to subsequent variation in the ecology of benthic adults. Using a combination of published and unpublished data, we compared the population structure of the salt marsh snail, Littoraria irrorata, between the South Atlantic Bight and the Gulf Coast of the United States to infer geographic differences in recruitment and to test the hypothesis that the Deepwater Horizon oil spill led to widespread recruitment failure of L. irrorata in Louisiana in 2010. Size-frequency distributions in both ecoregions were bimodal, with troughs in the distributions consistent …

Temporal Co2 Variations And The Influence Of Bat Colonies In Speleogenesis: Continuous Co2 Monitoring In War Eagle Cavern, Arkansas, Ginny Sue Holcomb

Graduate Theses and Dissertations

Dissolved concentrations of CO2 in a karst aquifer are a major control on calcite dissolutional processes, as CO2 combines chemically with water to form carbonic acid. As increasing amounts of CO2 are added to the system, greater resultant water aggressivity generates greater rates of dissolution. Spatial and temporal variations in carbon flux through the system may occur over a range of time scales, and high-resolution data collection is needed to truly understand and characterize such variability. Continuous CO2 monitoring in War Eagle Cavern, Arkansas, will suggest a number of influential parameters with varying degrees of importance throughout an annual cycle. …

Complex Vegetation Dynamics At The Fire–Grazing–Drought Nexus, Christine H. Bielski

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The discipline of ecology long ago moved away from viewing systems as static entities where disturbance processes, environmental stochasticity, and spatiotemporal variability play minor roles in determining ecosystem structure and function. Ecological theory continue to develop frameworks and statistical techniques capable of describing the inherent complexity in natural systems. However, in dealing with the complexity in nature, many applied disciplines have yet to adopt such frameworks or statistical techniques. The objective of this study was bridge the gap between ecological theory and application by using complex systems theory to describe grassland vegetation dynamics at the fire-grazing-drought nexus. Chapters 2 and …

The Biodiversity Of Gastrointestinal Nematodes In South African Wildlife, Chalis J. Bird

Theses, Dissertations, and Projects

In this study, I investigated the diversity of parasites found in cheetah and wild ungulates in South Africa in collaboration with the Samara Private Game Reserve in Graaff Reinet, South Africa. Scat samples were collected over a period of two months, from September November, 2014, and DNA was extracted on the preserve for gastrointestinal nematode analysis. Wildlife was tracked using radio telemetry, tracks, and sign, while habitat and host distribution were documented. The aim was to determine the community composition of gastrointestinal nematodes in the wildlife hosts through molecular identification and to examine the role of host habitat preference, geographical …

Contribution Of Lianas To Plant Area Index And Canopy Structure In A Panamanian Forest, M. Elizabeth Rodríguez-Ronderos, Gil Bohrer, Arturo Sanchez-Azofeifa, Jennifer S. Powers, Stefan A. Schnitzer

Biological Sciences Faculty Research and Publications

Lianas are an important component of tropical forests, where they reduce tree growth, fecundity, and survival. Competition for light from lianas may be intense; however, the amount of light that lianas intercept is poorly understood. We used a large-scale liana-removal experiment to quantify light interception by lianas in a Panamanian secondary forest. We measured the change in plant area index (PAI) and forest structure before and after cutting lianas (for 4 yr) in eight 80 m × 80 m plots and eight control plots (16 plots total). We used ground-based LiDAR to measure the 3-dimensional canopy structure before cutting lianas, …

Wolf Predation: Where And How Wolves Kill Beavers, And Confronting The Biases In Scat-Based Diet Studies, Thomas Gable

All NMU Master's Theses

Beavers can be a significant prey item for wolves in boreal systems but how wolves hunt beavers is largely unknown. I inferred how wolves hunt beavers by identifying 22 kill sites using clusters of locations from GPS-collared wolves in Voyageurs National Park, Minnesota. Where wolves killed beavers varied seasonally with the majority (58%) of kills in the spring occurring below dams and on shorelines while the majority (80%) of kills in the fall were near feeding trails and canals. I deduced that the typical hunting strategy has 3 components: 1) waiting near areas of high beaver use until a beaver …

Temporal Foraging Patterns Of Nonnative Frogs (Eleutherodactylus Coqui) In Hawaii, Arthur C. Wallis, Robyn L. Smith, Karen H. Beard

Wildland Resources Faculty Publications

The Puerto Rican Coqui Frog (Eleutherodactylus coqui) is a nocturnal, invasive species that was introduced into Hawaii in the 1980s. Because they reach extremely high densities (up to 90,000 frogs/ha), they have the potential to affect invertebrate prey communities. Previously, researchers used frogs collected only at night to characterize their prey. Because Coquis use retreat sites near the forest floor during the day and understory perch sites at night, frogs collected at night might show different amounts and types of prey than would frogs collected in the morning. We analyzed stomach contents of 435 frogs collected in the morning (0300–0600 …

Where And How Wolves (Canis Lupus) Kill Beavers (Castor Canadensis), Thomas Gable, Steve K. Windels, John G. Bruggink, Austin T. Homkes

Journal Articles

Beavers (Castor canadensis) can be a significant prey item for wolves (Canis lupus) in boreal ecosystems due to their abundance and vulnerability on land. How wolves hunt beavers in these systems is largely unknown, however, because observing predation is challenging. We inferred how wolves hunt beavers by identifying kill sites using clusters of locations from GPS-collared wolves in Voyageurs National Park, Minnesota. We identified 22 sites where wolves from 4 different packs killed beavers. We classified these kill sites into 8 categories based on the beaver-habitat type near which each kill occurred. Seasonal variation existed in …

Simple Soil Quality Tests And Organic Management Practices For Orchards In The Intermountain West, Esther Oline Thomsen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Soil health is often overlooked as a long-term management strategy as growers face an increasing number of short-term management challenges in the Intermountain West. The costs of inputs are rising and water resources are becoming more limited. Soil with poor health typically requires more amendments and fertlizers to meet crop needs. Soil health tests can help reveal management practices that reduce soil health, as well as those that improve soil health. Practices known to improve soil health are reduced to no tillage, cover crop use- especially legumes, and addition of mulch and other organic materials. Soil health testing is not …

Effect Of Fragmentation And Habitat Type On Coastal Nekton In Mississippi, Thomas Bennett Sevick

Master's Theses

Coastal wetlands are extremely productive ecosystems that support an abundance of organisms at higher tropic levels. Coastal wetlands also act as important buffers from storms and help protect major cornerstones of coastal economies, such as tourism and fisheries. Despite the clear need for the protection of these habitats, anthropogenic use of coastal wetlands has increased in frequency and intensity, resulting in the fragmentation of once continuous habitats. A central challenge to assessing the impact of marsh fragmentation is the lack of quantitative distribution and abundance data from specific habitat types. This is especially true for species that are not commercially …

Possible Past Hybridization Among Desmognathus Ochrophaeus In Canadice Lake: An Ecological Survey Exploring Desmognathine Salamanders And The Competitive Exclusion Hypothesis In The Western Finger Lakes Of New York State, Aisha L. Gadson

Theses

Dusky Salamanders are a varied group of sister taxa found in Northeastern North America. Two species, Desmognathus fuscus and Desmognathus ochrophaeus, have geographically overlapping ranges. In addition, they are very morphologically similar, share many niche requirements, and are found in extremely similar or even the same salamander communities. These shared traits have been posited to arise from the influence of niche conservatism during their species’ evolutions. Also, despite their physical similarities they are historically found not to hybridize on a large scale, nor have ever had a full population merge recorded. Therefore, it appears that the community ecology of these …

Development Of A Measure Of Model Fidelity For Mental Health Crisis Resolution Teams, Brynmor Lloyd-Evans, Gary R. Bond, Torleif Ruud, Ada Ivanecka

Dartmouth Scholarship

Crisis Resolution Teams (CRTs) provide short-term intensive home treatment to people experiencing mental health crisis. Trial evidence suggests CRTs can be effective at reducing hospital admissions and increasing satisfaction with acute care. When scaled up to national level however, CRT implementation and outcomes have been variable. We aimed to develop and test a fidelity scale to assess adherence to a model of best practice for CRTs, based on best available evidence.

Integration Of Plant Defense Traits With Biological Control Of Arthropod Pests: Challenges And Opportunities, Julie A. Peterson, Paul J. Ode, Camila Oliveira-Hofman, James D. Harwood

Entomology Faculty Publications

Crop plants exhibit a wide diversity of defensive traits and strategies to protect themselves from damage by herbivorous pests and disease. These defensive traits may be naturally occurring or artificially selected through crop breeding, including introduction via genetic engineering. While these traits can have obvious and direct impacts on herbivorous pests, many have profound effects on higher trophic levels, including the natural enemies of herbivores. Multi-trophic effects of host plant resistance have the potential to influence, both positively and negatively, biological control. Plant defense traits can influence both the numerical and functional responses of natural enemies; these interactions can be …

Integration Of Plant Defense Traits With Biological Control Of Arthropod Pests: Challenges And Opportunities, Julie A. Peterson, Paul J. Ode, Camila Oliveira-Hofman, James D. Harwood

Department of Entomology: Faculty Publications

Crop plants exhibit a wide diversity of defensive traits and strategies to protect themselves from damage by herbivorous pests and disease. These defensive traits may be naturally occurring or artificially selected through crop breeding, including introduction via genetic engineering. While these traits can have obvious and direct impacts on herbivorous pests, many have profound effects on higher trophic levels, including the natural enemies of herbivores. Multi-trophic effects of host plant resistance have the potential to influence, both positively and negatively, biological control. Plant defense traits can influence both the numerical and functional responses of natural enemies; these interactions can be …

Problems Of Multi-Species Organisms: Endosymbionts To Holobionts, David C. Queller, Joan E. Strassmann

Biology Faculty Research

The organism is one of the fundamental concepts of biology and has been at the center of many discussions about biological individuality, yet what exactly it is can be confusing. The definition that we find generally useful is that an organism is a unit in which all the subunits have evolved to be highly cooperative, with very little conflict. We focus on how often organisms evolve from two or more formerly independent organisms. Two canonical transitions of this type—replicators clustered in cells and endosymbiotic organelles within host cells—demonstrate the reality of this kind of evolutionary transition and suggest conditions that …

Different Prey Resources Suggest Little Competition Between Non-Native Frogs And Insectivorous Birds Despite Isotopic Niche Overlap, Robyn L. Smith, Karen H. Beard, Aaron B. Shiels

Wildland Resources Faculty Publications

Non-native amphibians often compete with native amphibians in their introduced range, but their competitive effects on other vertebrates are less well known. The Puerto Rican coqui frog (Eleutherodactylus coqui) has colonized the island of Hawaii, and has been hypothesized to compete with insectivorous birds and bats. To address if the coqui could compete with these vertebrates, we used stable isotope analyses to compare the trophic position and isotopic niche overlap between the coqui, three insectivorous bird species, and the Hawaiian hoary bat. Coquis shared similar trophic position to Hawaii amakihi, Japanese white-eye, and red-billed leiothrix. Coquis were about 3 ‰ …

Student Hopes Class Tumblr Spreads Ecofeminism Awareness, Ohio University College Of Arts & Sciences

All Forum Articles

No abstract provided.

Sandhill Crane Roost Selection, Human Disturbance, And Forage Resources, Aaron T. Pearse, Gary L. Krapu, David A. Brandt

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Sites used for roosting represent a key habitat requirement for many species of birds because availability and quality of roost sites can influence individual fitness. Birds select roost sites based on numerous factors, requirements, and motivations, and selection of roosts can be dynamic in time and space because of various ecological and environmental influences. For sandhill cranes (Antigone canadensis) at their main spring staging area along the Platte River in south-central Nebraska, USA, past investigations of roosting cranes focuse donphysical channel characteristics related to perceived security as motivating roost distribution.We used 6,310 roost sites selected by 313 sandhill cranes over …

The Association Between Environmental Factors And Scarlet Fever Incidence In Beijing Region: Using Gis And Spatial Regression Models, Gehendra Mahara, Chao Wang, Kun Yang, Sipeng Chen, Jin Guo, Qi Gao, Wei Wang, Quanyi Wang, Xiuhua Guo

Research outputs 2014 to 2021

Background:

Evidence regarding scarlet fever and its relationship with meteorological, including air pollution factors, is not very available. This study aimed to examine the relationship between ambient air pollutants and meteorological factors with scarlet fever occurrence in Beijing, China.

Methods:

A retrospective ecological study was carried out to distinguish the epidemic characteristics of scarlet fever incidence in Beijing districts from 2013 to 2014. Daily incidence and corresponding air pollutant and meteorological data were used to develop the model. Global Moran’s I statistic and Anselin’s local Moran’s I (LISA) were applied to detect the spatial autocorrelation (spatial dependency) and clusters of …

Evaluation Of Search And Rescue Planning Tools On The West Florida Shelf, Benjamin O'Loughlin

USF Tampa Graduate Theses and Dissertations

The Coast Guard conducts over 20,000 search and rescue cases a year with approximately 5% of them occurring within the coastal waters of the West Florida Shelf (WFS). Each search effort is planned using the Coast Guard’s Search and Rescue Optimal Planning System (SAROPS) which uses model inputs to create composite probability distributions based on the results of Monte Carlo projections of thousands of particle trajectories. However, SAROPS is limited by the quality of model inputs and their associated errors. This study utilizes observations from three surface drifter deployments on the WFS to evaluate the effectiveness of available surface current …

Und Today: November 2016, University Of North Dakota

UND Today Archive

No abstract provided.

Obstetric Patients In Intensive Care Unit: Perspective From A Teaching Hospital In Pakistan, Rahat Qureshi, Sheikh Irfan Ahmed, Amir Raza, Ayesha Khurshid, Uzma Chishti

Department of Obstetrics & Gynaecology

Objective: Review of obstetric cases admitted to the intensive care unit.
Design: Ten year retrospective review of individual patients' medical records.
Participants: Records of obstetric patients admitted from 2005-2014.
Setting: Aga Khan University Hospital Karachi.
Main outcome Measures: Diagnosis at the time of admission, associated risk factors, and intervention required aspects of management and rate of mortality.
Findings: A total of 194 obstetric patients were admitted out of which 86.2% of patients had ventilator support. Mortality was not seen to be significantly associated with parity and antenatal/postnatal status. The median age of patients was 34 years, minimum length of stay …

Currents In Fishery Management, Genevieve Depuy

University Honors Theses

This thesis provides an overview of fishery management policy types and attempts to determine best practices for biological sustainability in terms of species preservation and biomass recovery. Key concepts include biological sustainability, regulatory forces, and fishery management and output trends. The research question investigated is: what are the best policy practices for regulating marine fishery health and biological stability? The research process of this paper included a review of prior literature in the field of marine policy and fishery management, as well as the use of United States data from the Pacific and Atlantic coasts to evaluate management strategies. Based …

Bioaerosol Deposition On An Air-Conditioning Cooling Coil, Yan Wu, Ailu Chen, Irvan Luhung, Elliott T. Gall, Qingliang Cao, Victor Wei-Chung Chang, William W. Nazaroff

Mechanical and Materials Engineering Faculty Publications and Presentations

This study is concerned with the role of a fin-and-tube heat exchanger in modifying microbial indoor air quality. Specifically, depositional losses of ambient bioaerosols and particles onto dry (not cooled) and wet (cool) coil surfaces were measured for different airspeeds passing through the test coil. Total, bacterial and fungal DNA concentrations in condensate water produced by a wet coil were also quantified by means of fluorescent dsDNA-binding dye and qPCR assays. Results revealed that the deposition of bioaerosols and total particles is substantial on coil surfaces, especially when wet and cool. The average deposition fraction was 0.14 for total DNA, …

Sleep As An Evolved Behavior: Ecological Opportunity Costs And Sleep Optimization, Gandhi Yetish

Anthropology ETDs

Sleep problems afflict millions world-over. Treating this has been difficult because there is no consensus definition for “normal” sleep. People can vary in their personal sleep need, but the determinants of variation in sleep duration are largely unknown, as is the criteria to determine how much variation is normal. Given that most diurnal mammals (including primates) appear to sleep from sunset to sunrise, the leading explanation for sleep pathology in the post-industrial world has been that electronics, especially light illuminating devices, substantially reduce sleep duration. This assertion has heretofore only been tested experimentally. This research aims to resolve this issue …

Hybrid Taguchi-Objective Function Optimization Approach For Automatic Cave Bird Detection From Terrestrial Laser Scanning Intensity Image, Mohammed O. Idrees, Biswajeet Pradhan

International Journal of Speleology

This paper proposes an optimized Taguchi-objective function segmentation-based image analysis to detect bird nests in a cave from high resolution terrestrial laser scanning intensity images. First, the Taguchi orthogonal array was used to design 25 experiments with three segmentation parameters: scale, shape, and compactness, each having five variable factor levels. Then, a plateau objective function was computed for each experiment using their respective level combinations. A merger of the factor level combination in the orthogonal array and the computed plateau objective function values was used to generate main effects and interaction plots for signal-to-noise ratios, which provided a measure of …