Digital Commons Network^™

Aboveground Biomass Density Estimation Using Deep Learning: Insight From Neon Ground-Truth Data And Simulated Gedi Waveform, Ashish Mahaur

Dissertations, Master's Theses and Master's Reports

Accurately estimating Aboveground Biomass Density (AGBD) is crucial for managing Earth's carbon cycle and informing climate strategies. NASA's GEDI mission advances global forest mapping, but traditional linear models often yield less reliable AGBD estimates. This study enhances AGBD estimation using deep learning models with NEON ground-truth data and simulated GEDI waveforms. We compared 1D CNNs, LSTMs, and pre-trained CNNs to traditional models. The ResNet152 model outperformed linear regression, achieving an R² of 0.68, demonstrating a 17% improvement. Our experiments also demonstrate the importance of large, diverse datasets, particularly for training deep learning models.

Animal Personality And Sentience As Distinct Concepts, Mark Briffa

Animal Sentience

Owens et al (2024) discuss how knowledge of both animal personality and sentience in target populations can be leveraged to enhance wildlife conservation programmes. In this commentary I expand on the distinction between these two concepts. Behavioural differences should be considered broadly across conservation programmes, not just those involving species deemed sentient.

Descriptive Study Of Adult Male Acheta Domesticus Phonotaxis, Dana Husana

Master's Theses

The phonotactic behavior of male Acheta domesticus has not been described at length. The present study evaluates the phonotactic responses of male A. domesticus in relation to age. Male crickets of different ages (young and old) were exposed to calls with attractive and non-attractive syllable periods for this species. Both age groups exhibited phonotaxis but did not show a preference towards the attractive call over the non-attractive ones. No significant relationship was found between age and phonotactic response. Additionally, no significant differences were observed between age and preferred syllable period. Acoustic responses were also observed in some of the older …

Novel Analytical Approaches For The Study Of Energy And Nutrient Flow In Streams, Michelle Catherine Kelly

Dissertations, Master's Theses and Master's Reports

This dissertation applied novel modeling, experimental and statistical approaches to overcome the challenges of measuring and analyzing energy and nutrient cycling in streams through 3 studies: (1) determining the predictors of respiration and denitrification in streams across the United States, (2) simultaneous estimation of denitrification and nitrogen (N) fixation rates, and (3) the impact of C lability metrics on the interpretation of C degradation in DOM incubation experiments. In the first study, I used predictive modeling approaches to show that respiration and denitrification were positively correlated across the landscape but were predicted by factors at different spatial scales. Denitrification rates …

Monitoring Faunal Responses To Biodegradable Oyster Reef Restoration Materials With Camera Traps, Tara L. Blanchard

Honors Undergraduate Theses

Restoration of the oyster reefs has become increasingly crucial due to great population declines around the globe. Intertidal oyster reefs provide essential foraging and loafing grounds to many faunal species, including several threatened/endangered wading bird species. Biodegradable oyster reef restoration materials have been introduced to avoid potential plastic pollution from traditional materials. Studies have shown success regarding oyster recruitment rates to these materials. However, their impacts on fauna using restored oyster reefs are unknown. This project aims to evaluate oyster reef restoration using biodegradable materials to increase faunal diversity, abundance, and foraging behaviors. Camera traps were deployed to observe fauna …

Use Of Thermal Microhabitats By Herpetofauna In A Fragmented Rainforest Landscape In Colombia, Catalina Valderrama

Masters Theses

No abstract provided.

Coyotes In The Great Basin Desert Do Not Exhibit A Spatial Response Following The Removal Of Anthropogenic Water Sources, Nadine A. Pershyn, Eric M. Gese, Erica F. Stuber, Bryan M. Kluever

United States Department of Agriculture Wildlife Services: Staff Publications

Coyote (Canis latrans) range expansion into desert ecosystems has highlighted the role of anthropogenic water sources in arid ecosystems. Despite hypotheses that additional water facilitated this expansion, previous studies reported that coyotes did not exhibit a spatial or dietary response to removal of anthropogenic water. We used GPS data to examine if coyotes responded to water removal at a finer spatial scale than previously investigated. Our integrated step selection analysis did not find evidence that coyotes adjusted their distance to water following water removal. Vegetation was an important factor in habitat selection of coyotes, with riparian and agricultural …

Kit Foxes Demonstrate Adaptive Compromise Characteristics Under Intraguild Predation Pressure By Coyotes In The Great Basin Desert, Nadine A. Pershyn, Eric M. Gese, Erica F. Stuber, Bryan M. Kluever

United States Department of Agriculture Wildlife Services: Staff Publications

Coyotes (Canis latrans) are believed to contribute to declining kit fox (Vulpes macrotis) numbers in the Great Basin desert through intraguild predation. Intraguild prey have been shown to exhibit adaptive compromise, whereby an animal increases selection for risky, but food-rich areas during times of food stress (i.e. winter). We evaluated the habitat selection of kit foxes in the Great Basin desert to elucidate if they demonstrated adaptive compromise as a method of coexisting with coyotes. We created 2nd order resource selection functions to analyze kit fox habitat selection associated with coyote relative probability of use (RPU), …

A Genus In The Bacterial Phylum Aquificota Appears To Be Endemic To Aotearoa-New Zealand, Jean F. Power, Carlo R. Carere, Holly E. Welford, Daniel T. Hudson, Kevin C. Lee, John W. Moreau, Anna-Louise Reysenbach, Thijs J.G. Ettema, Multiple Additional Authors

Biology Faculty Publications and Presentations

Allopatric speciation has been difficult to examine among microorganisms, with prior reports of endemism restricted to sub-genus level taxa. Previous microbial community analysis via 16S rRNA gene sequencing of 925 geothermal springs from the Taupō Volcanic Zone (TVZ), Aotearoa-New Zealand, revealed widespread distribution and abundance of a single bacterial genus across 686 of these ecosystems (pH 1.2-9.6 and 17.4-99.8 °C). Here, we present evidence to suggest that this genus, Venenivibrio (phylum Aquificota), is endemic to Aotearoa-New Zealand. A specific environmental niche that increases habitat isolation was identified, with maximal read abundance of Venenivibrio occurring at pH 4-6, 50-70 °C, and …

State Of Coastal And Marine Resources: Sablayan, Occidental Mindoro, Ma Celina J. Añonuevo, Jemelyn Grace P. Baldisimo, Denmark B. Racamara, Mary Joyce P. Velos, Joseph Benedict T. Garcia, Frederico B. Sabban, Joey P. Cabasan, Rhea Mae Luciano, Darryl Anthony Valiño, Lovely Joy Heyres, Hazel O. Arceo

Biological Sciences Faculty Publications

[Introduction] Sablayan, situated on the western side of Mindoro Island facing the WPS (12.8564° N, 120.9101° E), is a first-class municipality in the province of Occidental Mindoro with a total land area of 2,188.8km² that is divided into 22 barangays, nine of which are along the coast. The coastline stretches for 115 km, with municipal waters covering approximately 750,000 km² (LGU-Sablayan 2008).

The Apo Reef Natural Park, one of its most prominent features, is located approximately 33 km off the coast (Figure 2.9-1) The Apo Reef Natural Park is a protected coral reef system under presidential proclamation 868 (1996) encompassing …

State Of Coastal And Marine Resources: Lian, Batangas, Joseph Benedict T. Garcia, Mary Joyce P. Velos, Jemelyn Grace P. Baldisimo, Joey P. Cabasan, Ma Celina J. Añonuevo, Denmark B. Recamara, Hazel O. Arceo

Biological Sciences Faculty Publications

[Introduction] Lian (13.9852° N, 120.6545° E) is a third-class municipality in the northwestern part of the province of Batangas. It is bounded on the north by the municipality of Nasugbu, on the east by the municipalities of Tuy and Balayan, on the west by the WPS, and on the south by the municipality of Catatagan (Figure 2.7-1). It has a total land area of 76.80km² that is divided into 19 barangays, six of which are coastal and two are integrated coastal barangays (LGU-Lian 2013). Its total population is 56,280 individuals in 15,991 households as of 2020 (PSA 2020).

The main …

Concepts In Animal Parasitology, Chapter 65: Triatominae Jeannel, 1919 (Subfamily): Kissing Bugs [Arthropoda], Sue Ann Gardner

Concepts in Animal Parasitology

An overview compiled from open access sources about kissing bugs, subfamily Triatominae Jeannel, 1919, including their hemtaophage biology, morphology of a representative species, Triatoma sanguisuga, history of the subfamily, biogeographic history, phylogeny, life cycle, triatomines serving as a vector for Trypanosoma cruzi, triatomine behavior, and medical importance.

Chapter 65 in Concepts in Animal Parasitology, compiled by Sue Ann Gardner. 2024. S. L. Gardner and S. A. Gardner, editors. Zea Books, Lincoln, Nebraska, United States. doi: 10.32873/unl.dc.ciap065

Compiled from the work of: C. Nunes de Araújo, T. V. Azeredo-Oliveira, I. Marques Dourado Bastos, K. L. da Silva Bentes, C. …

Concepts In Animal Parasitology, Chapter 08: Distributional Ecology Of Parasites [Parascript Approaches], A. Townsend Peterson

Concepts in Animal Parasitology

Discusses the distributional ecology of parasites, exploring the factors influencing their geographic distributions and the complexities involved compared to free-living organisms.

Chapter 8 in Concepts in Animal Parasitology on distributional ecology of parasites by A. Townsend Peterson. 2024. S. L. Gardner and S. A. Gardner, editors. Zea Books, Lincoln, Nebraska, United States. doi: 10.32873/unl.dc.ciap008

Concepts In Animal Parasitology, Chapter 45: Lecithodendriidae Lühe, 1901 (Family) [Platyhelminthes, Trematoda, Digenea, Plagiorchiida, Xiphidiata], Jeffrey M. Lotz

Concepts in Animal Parasitology

An overview of the trematode (fluke) family Lecithodendriidae Lühe, 1901, which inhabit the intestinal tract of insectivorous bats and occasionally birds. Includes a discussion of identification, general morphological charcteristics, systematics, taxonomy, life cycles, human and veterinary health significance, and ecology.

Chapter 45 in Concepts in Animal Parasitology, by Jeffrey M. Lotz. 2024. S. L. Gardner and S. A. Gardner, editors. Zea Books, Lincoln, Nebraska, United States. doi: 10.32873/unl.dc.ciap045

Light At Night And Cancer Incidence: A Gis-Based Study In The Us, Linshuoshuo Lyu

Public Health Theses

Aims: Light at night (LAN) can cause circadian disruption and was found to be a potential risk factor for several cancers. This study aims to confirm the adverse effect of LAN on hormone-related cancers and explore the association between LAN and the prevalence of various cancer types under an ecological study design. Methods: County-level age-adjusted cancer incidence data was obtained from the CDC Cancer Statistics (2016 to 2020), while LAN data (1996 to 2000) was obtained from the satellite imagery of Version 4 Defense Meteorological Satellite Program. Linear mixed effect regression models (LMMs) were performed to assess the relationship of …

Do Rental Assistance Programs Relieve Overcrowding In U.S. Children?, Frank Zhu

Public Health Theses

Introduction: Crowded living conditions are associated with many negative health outcomes, with significant implications for children, as they are particularly shaped by their home environment and more likely to live in crowded conditions, given their larger household size. How rental assistance programs may shape and improve household crowding has not been previously explored. Methods: This study leveraged data from NHANES linked with HUD administrative rental assistance records. We examined changes in crowding measures in U.S. children using linear and logistic regression models stratified by different rental assistance program types. Results: There was a statistically significant 40 percentage point reduction in …

Grass Rejection By Capybaras Can Be Used As A Possible Strategy To Mitigate Road Accidents, André Luiz Gama Nogueira, Sérgio Luiz Gama Nogueira-Filho, Selene Siqueira Da Cunha Nogueira, Denis Sato, Natasha Camilo Maximiano Da Silva, Lilian Elgalise Techio Pereira, Michael Mendl, Adroaldo José Zanella

Human–Wildlife Interactions

Feeding management can be a good strategy for avoiding wildlife–vehicle collisions (WVCs), which are a worldwide concern. In this study, we aimed to identify grass species that capybaras (Hydrochoerus hydrochaeris) reject as feeding material. These species could be planted to make roadsides less attractive to capybaras and, consequently, decrease WVCs involving this species. We planted 3 grass species (Brachiaria decumbens cv. Basilisk, B. hybrid Mavuno, and Zoysia japonica) in 4 blocks, applying a randomized-complete blocks design. The first 2 species we assumed would be rejected, since some animals do not consume them due to their high …

Cover, Editorial Staff, Journal Information

Human–Wildlife Interactions

This includes the cover caption, editorial staff, and journal information.

Survival Of Translocated Coyotes In The Chicago Metropolitan Area, Usa, Charlotte R. Milling, Chris Anchor, Stanley D. Gehrt

Human–Wildlife Interactions

For nuisance animals, the general public perceives translocation to be a humane alternative to lethal control measures, but survival of translocated wildlife is often quite low due in part to increased movement post-release. Thus, for common species whose relocation generally serves a social rather than conservation purpose, translocation might not be correctly characterized when presented as nonlethal. We quantified release site fidelity and survival of coyotes (Canis latrans) fitted with very high frequency radio-collars and translocated within the Chicago Metropolitan Area, Illinois, USA, from 2000 to 2006. We also compared survival for 14 weeks post-collaring for our translocated …

Cover, Editorial Staff, Journal Information

Human–Wildlife Interactions

This includes the cover caption, editorial staff, and journal information.

Blood Lead Level And School Violence Among Male Secondary School Students In A-Kut City Center/ Wasit Province, Isam Salim Ismaiel, Khalida Abdul-Sattar, Hasan Alwan Baiee

Hilla University College Journal For Medical Science

Background: Toxic level of blood lead among schoolchildren was associated with violent behavior and may lead to delinquencies and truancy as well as low social skills and poor school performance.

Objective: to assess blood lead level among sample of students in secondary schools in Kut City and determining its relation to violent behavior.

Methods: A cross-sectional study was carried out targeting students in three secondary schools in Kut City/Iraq. A convenience sample of 54 students were selected where; (27 violent students and 27 non-violent students) according to certain reference criteria.

Results: This study shows that 74% of our students had …

On The Ground And From Above: A Multi-Factor Analysis Of The Direct And Indirect Drivers Of Tallgrass Prairie Small Mammal Communities, Erin Rowland-Schaefer

Graduate Research Theses & Dissertations

Tallgrass prairies are among the most globally threatened ecosystems, with only one percent of the historical extent remaining in Illinois. Prairie restoration is an essential strategy to preserve biodiversity and reestablish threatened species. Practitioners use management tools to shift the landscape context of prairie restoration sites, such as prescribed fire and land cover change. Managers can also impact the landscape connectivity and edge proximity of certain areas through the use of mowed driving lanes. The effects of these factors on small mammals, which are central in tallgrass prairie food webs and relevant to human health and restoration success, are not …

Evaluating Computational Reproducibility Of Jupyter Notebooks Using Machine Learning And Natural Language Processing, A S M Shahadat Hossain

Graduate Research Theses & Dissertations

In recent years, computational reproducibility, which refers to achieving consistent results upon rerunning an experiment, has become one of the major concerns of various research communities. Jupyter Notebook, as a web-based computational notebook application, offers useful features for running and publishing computational experiments through interactive environments. However, rerunning notebooks does not always reproduce the experimental results. This thesis aims to develop novel methods to evaluate reproducibility by comparing different types of outputs between original and rerun notebooks. It also explores the idea of using machine learning models to predict reproducibility of notebooks automatically without the need of rerunning them. Through …

Evaluation Of Conservation Strategies For Blanding’S Turtles (Emydoidea Blandingii), Callie Klatt Golba

Graduate Research Theses & Dissertations

Across the globe, biodiversity is threatened due to anthropogenic changes to the environment and large numbers of freshwater species, especially turtles, are facing population declines. Resources for conservation are limited, making empirically based conservation planning of utmost importance. Effective management strategies incorporate relevant biological information to outline specific and feasible actions that will mitigate the greatest threats to a species. Blanding’s Turtles (Emydoidea blandingii) are a long-lived, semi-aquatic, freshwater species that are classified as endangered in Illinois and internationally. As with other species of concern, Blanding’s Turtles are threatened by habitat loss, fragmentation, and degradation. They are also threatened by …

The Association Between Disease Burden And Alzheimer's Hospitalization Rates In Older Adults., Autumn Johnson

High Impact Practices Student Showcase Spring 2025

Dementia refers to symptoms that impair daily life, including social and intellectual abilities, with memory loss being a key feature. Conditions such as Creutzfeldt-Jakob Disease, Huntington’s Disease, and Alzheimer’s Disease (AD) are major causes of memory loss. Alzheimer’s is a progressive disorder that deteriorates memory and thinking skills, characterized by withdrawal from social activities, mood changes, and confusion about time or place.

Age is the leading risk factor for Alzheimer’s, alongside non-modifiable factors like genetics and family history. Modifiable factors include physical activity, smoking, education, and social engagement. The Alzheimer’s Association’s 2024 fact sheet emphasizes the need for more research …

Mobile Payment, Financial Behavior And Financial Anxiety: A Multi-Group Structural Equation Modeling Study, Ting An, Jing Jian Xiao, Nilton Porto, Luiz Cruz

Human Development and Family Science Faculty Publications

Purpose: This study aims to examine the association between mobile payment usage and financial anxiety, and explores the mediating role of financial behavior. Moreover, this research also compares the moderating effects of financial education and financial knowledge.

Design/methodology/approach: A sample of 18,584 consumers from the 2021 National Financial Capability Study in the U.S. was analyzed. Structural equation modeling (SEM) was employed to explore indirect associations between mobile payment usage and financial anxiety. Two undesirable financial behaviors, overspending and over-indebtedness were used as mediators between mobile payment and financial anxiety. Moreover, multi-group analyses was conducted for two financial knowledge …

Assessment Of Total Petroleum Carbon And Heavy Metals Of Some Selected Plants Grown In Crude Oil Polluted Soils Using Gc-Fid, Pius O. Adah, Ndem E. Edu, Reagan B. Agbor, Henry B. Kogbara

Applied Environmental Research

This study was focused on assessing the phytoremediation potentials of some selected plant species on crude oil contaminated soils. Five plant species were cultivated in soils polluted with crude oil at 10, 50, 100, 150 and 200 mg kg-1. The results revealed that there were significant reduction in THC contents of soil ameliorated with the various plants species compared to the control group increases with increasing concentration of crude oil pollutant in soil. THC was 62.24 mg kg-1, 1,120 mg kg-1, 208.67 mg kg-1, 257.87 mg kg-1 and 2,762.79 mg kg-1 for R. simplex, P. balfouriana, K. pinnata …

Long- And Short-Term Weather Variables Affect Capture Rates In Western Painted Turtles (Chrysemys Picta Bellii) In Marshall Co., South Dakota, Amy Dolan, Heather L. Waye, Peter Dolan

Biology Publications

Turtle populations are declining globally, and yet accurate long-term population surveys are often lacking. Even amongst widespread species, information on long-term population trends is largely missing. As such, studies on demographics, population structure, and factors that affect capture efficacy are needed. In 2019 we began a long-term study on Western Painted Turtles (Chrysemys picta bellii) in the Couteau des Prairie habitat in northeastern South Dakota. We captured turtles using several trapping techniques and investigated the effects of short- and long-term weather variables on catch per unit effort. Temperature was positively associated with daily capture rates, showing the strongest …

A Digital Platform That Integrates Biogeographic, Molecular, And Phenotypic Relationships Of Wild Plants, Fruits, And Associated Insects In Kenya, Bonface Odhiambo Onyango

All Master’s Theses

Museum biocollections contribute to exploratory studies on insects, which are increasingly providing insights into their interactions with fruits. Scientists at the International Centre of Insect Physiology and Ecology (icipe) conducted a study which documented data on biocollections of wild plants, fruits, and associated insects. Despite publishing this study, most of the data records remained secluded within icipe. In addition, the biocollections lacked associated molecular data information limiting the understanding of their phylogenetic relationships.The aim of this study was to digitize the icipe biocollections and integrate the corresponding publicly available molecular barcodes. First, a database was designed.Second, respective barcodes were retrieved …

Optimisation Of Classification Methods To Differentiate Morphologically-Similar Pollen Grains From Ft-Ir Spectra, Laura Scoble, Simon J. Ussher, Mark F. Fitzsimons, Lauren Ansell, Matthew Craven, Ralph M. Fyfe

School of Geography, Earth and Environmental Sciences

A growing body of research is demonstrating the potential of Fourier-Transform Infrared spectroscopy (FT-IR) to identify and differentiate morphologically similar pollen taxa. The Poaceae (grass) family is a large and complex with morphologically similar pollen grains. It is not possible to use traditional light microscopy to differentiate Poaceae species, or genus, based on pollen morphological characteristics. This research presents a study of five species from the Poaceae family found across a wide variety of different moorland vegetation communities, to test the extent to which FT-IR microspectroscopy can be used to separate and identify these species and develop statistical approaches for …