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The Inside Scoop: Elucidating The Three-Way Relationship Between Schistosoma Mansoni, The Gut, And Vaccines, Mariam A. Mhanna

Biomedical Sciences Theses & Dissertations

Schistosomiasis is a neglected tropical disease that affects over 250 million people worldwide. This blood fluke infection burdens communities and areas with limited to no access to clean fresh water. When a host is exposed to cercariae, the infectious agent, in a body of water, it matures in the host’s circulation into adult female and male worms. Copulated adult worms migrate to the mesentery, in the case of Schistosoma mansoni, and produce eggs that can cross the intestinal barrier and get excreted in the feces to continue the lifecycle. The effects of S. mansoni infection on the host …

Towards Improving Computational Modeling Of The Lumbar Spine - Impact Of Material Properties And Laminotomy On Spinal Biomechanics, Isaac K. Kumi

Mechanical & Aerospace Engineering Theses & Dissertations

Spinal ligaments play a crucial role in maintaining the mechanical stability of the lumbar spine. These dense, collagenous tissues not only resist excessive motion but also distribute loads between spinal components to protect neural structures. Traditionally, the mechanical response of ligaments has been modeled using linear elastic assumptions, which treat the tissue as having a constant stiffness regardless of loading history. While this simplifies analysis, it fails to capture the time-dependent behaviors, such as creep, stress relaxation, and hysteresis, that are characteristic of biological tissues.

Viscoelastic modeling may provide a more physiologically accurate representation by incorporating both elastic and viscous …

Hypertension, Diabetes, And Chronic Kidney Disease In Young Adults: Nhanes Data From 2013-2018, Ashly Rodriguez Reyes

Undergraduate Scholarship and Creative Works

Background. Several studies have reported the link between diabetes, cardiovascular disease, hypertension, and obesity as risk factors for the onset of chronic kidney disease (CKD), ultimately leading to renal replacement therapies such as dialysis and kidney transplantation. Although extensively researched in adults aged 55 years and older, CKD remains under-researched for young adults. Despite its emergence as a healthcare concern, limited data exists on risk factors impacting young adults without major comorbidities.

Objective. This research study aims to understand the potential risk factors unique to this population, seeking to guide prevention strategies and improve prognosis in already diagnosed individuals. Additionally, …

Trophic Roles And Climate-Driven Vulnerability For Benthic Invertebrates At Artificial Reefs In The Northern Gulf Of Mexico, Amanda Kirkland

LSU New Orleans Theses and Dissertations

Artificial reefs are deployed to enhance marine habitats and fisheries, yet their role in supporting secondary production and their vulnerability to climate stressors remain understudied. This dissertation investigates the trophic ecology and climate sensitivity of benthic invertebrates at artificial reefs in the northern Gulf of Mexico. Chapter 1 assessed reef food webs using stable isotopes from fishes, invertebrates, and primary producers across six reefs and two seasons. Mixing models showed that most fishes rely on benthic reef carbon, while suspension feeders consume plankton and sediment microphytobenthos. Isotopic niche analysis revealed functional diversity and seasonal shifts in δ¹³C and δ³⁴S, though …

Breeding Biofortified Protein Rich Organic Pulses For Better Human Health, Sonia Salaria

All Dissertations

Pulse crops are dry grains of legumes, the second most consumed plant crops in the world after cereals. These crops are one of the primary sources of plant-based protein and contain high concentrations of pre-biotic carbohydrates, minerals and vitamins. Recognizing the health benefits of pulses intake, their demands as sustainable food and changes in people’s diet preferences for plant-based protein have increased awareness for pulses consumption. With this scenario, improving the nutritional profile of pulse crops for rich nutrition has been an opportunity for breeders to explore and tailor the available germplasm to develop nutrient dense pulses. Furthermore, the genomic …

Population Analysis Of Cyanobacteria In Rotating Algal Biofilm Reactors, Eric H. Matthews

All Graduate Theses and Dissertations, Fall 2023 to Present

Algal biofilms have numerous applications in wastewater treatment and bioproduct production. The Sustainable Waste-to-Bioproducts Engineering Center at Utah State University is working to develop rotating algal biofilm reactors (RABRs) to remove excess nitrogen and phosphorus from wastewater effluent while producing biomass for downstream production.

Genetic analysis of algal biofilms on various RABRs was performed to gain improved understanding of the biofilm populations. This analysis focuses on a pilot-scale RABR and how it compares to several other RABRs. Additionally, old methods of genetic analysis filtered out important cyanobacterial populations. A new method was developed to identify the cyanobacteria within the biofilms. …

Modeling For Functional Traits In Bluebunch Wheatgrass Using Unmanned Aerial Vehicle (Uav) High-Throughput Phenotyping, Brittany L. Johnson

All Graduate Theses and Dissertations, Fall 2023 to Present

Changing climates and shifts in community composition in the Intermountain West threaten sagebrush-steppe ecosystems, impacting both plants and animals. Restoring native grasses like bluebunch wheatgrass (Pseudoroegneria spicata; BBWG) can help ecosystems resist invasive species and recover from stress and disturbances. As a native cool-season grass, BBWG is widely used in rangeland restoration for the western U.S. Breeding programs for restoration plant materials, such as seeds for ecological projects, often require years or decades of field testing while facing staffing constraints. High- throughput phenotyping (HTP), which rapidly measures observable plant traits, offers a faster solution using drones to capture time-series …

Linking Variation In Mule Deer Nutritional Condition And Age To Population Performance In A Temperate Environment, Kent R. Hersey

All Graduate Theses and Dissertations, Fall 2023 to Present

The amount of body fat animals have as they enter and exit winter can have major impacts on how well they survive and reproduce. Mule deer are widely distributed herbivores whose survival and reproduction are strongly tied to weather patterns and the quality of vegetation they consume, which in turn impacts nutritional condition. The objective of this study was to identify and quantify the factors (animal specific, climatic, or habitat) influencing mule deer body fat during both summer and winter in Utah and examine how nutritional condition influences survival. We found December body fat was most affected by December lactation …

Ecology And Management Of Forest Grouse: Breeding Acoustic Monitoring, Spatial Behavior, And Harvest, Logan Clark

All Graduate Theses and Dissertations, Fall 2023 to Present

Forest grouse are difficult to study and manage in the Intermountain West because they live in remote, rugged areas and do not gather at predictable display sites like other grouse species. From 2023 to 2025, I studied two species, dusky grouse (Dendragapus obscurus) and ruffed grouse (Bonasa umbellus), to test new survey tools, track their seasonal movements, and evaluate hunting impacts.

First, I tested whether small audio recording devices placed in the forest could minimize labor needed for spring breeding surveys. To do this, I conducted traditional surveys with human observers at the same time and …

From Supercomputers To Desktops: An Interactive And Portable System For Particle In Cell Simulation And Visualization Using Commodity Hardware, Kim Peterson

All Graduate Theses and Dissertations, Fall 2023 to Present

Generating and analyzing visual representations of simulation data in real time (i.e., during execution), has become increasingly important for handling the complexity and scale of modern computational models. Traditionally, this approach has been limited to High-Performance Computing (HPC) environments, leaving some researchers, students and educators without resources to explore cutting-edge simulations and analyses. This work attempts to show that powerful scientific simulations and real-time analysis can be made available by using more easily obtained commodity hardware. This approach may enable a broader participation in the scientific computing discovery process.

In this paper, we explore how advanced simulation and visualization frameworks …

Exploring Biotic And Abiotic Drivers Of Ecosystem Properties: The Influence Of Waterbirds And Photodegradation On Wetland Ecosystems, Lindsay Miller

All Graduate Theses and Dissertations, Fall 2023 to Present

Wetlands provide a wide range of valuable ecosystem services: these are benefits from the environment that support human well-being, such as water filtration, fish and bird habitat, and shoreline protection. Despite their importance, wetlands are among the most threatened ecosystems, facing increasing pressure from natural and human activities. To better predict the future of wetlands and guide effective management and restoration practices, we need to understand the various forces shaping their ecological properties. In this thesis, we examined the influence of two forces: waterbirds and photodegradation (the process by which sunlight breaks down plant material). To explore each of these …

What’S The Beef With Agriculture? Evaluating The Effectiveness Of An Agricultural Literacy Intervention On Students’ Attitudes And Knowledge Toward Sustainability And Animal Agriculture, Jenny E. Bennett

All Graduate Theses and Dissertations, Fall 2023 to Present

Agricultural literacy is essential for helping individuals understand how food systems impact their daily lives and society. While most research has focused on students’ knowledge, this study addresses the underexplored role of attitudes—critical predictors of behavior—as outcomes of educational interventions. This research analyzed survey data collected before and after an agricultural literacy intervention delivered to high school students in school-based agricultural education (SBAE) programs. The curriculum focused on sustainability in animal agriculture.

Findings from paired samples t-tests showed statistically significant improvements in students' attitudes (from moderately neutral to more positive) and knowledge scores. Further analyses revealed that demographic factors such …

Impacts Of 4r Nitrogen Management And Water Optimization On Soil Health, Kamaldeep Kamaldeep

All Graduate Theses and Dissertations, Fall 2023 to Present

Farmers in Utah and Idaho are facing growing challenges due to high fertilizer costs, limited irrigation water, and pressure to improve long-term soil health. To better understand current practices and grower attitudes, a survey was conducted in 2020 targeting 5,000 producers of small grains, corn, and potatoes. Although the response rate was low, 146 growers representing over 25,000 hectares of cropland participated. Survey results showed that most growers are open to improving nitrogen and irrigation practices and care about their soil health, even if not all are fully using 4R or precision agriculture methods.

This thesis includes two field studies …

Setting Salinity Water-Quality Standards Protective Of Aquatic Life: Insights From Analyses Of The Effects Of Salinity On Stream Insects, Katlyn M. Gardner

All Graduate Theses and Dissertations, Fall 2023 to Present

Freshwater ecosystems are becoming saltier due to human activities like agriculture, urbanization, and resource extraction. This change in salinity is important because we know very little of how stream salinity affects aquatic insects at natural concentrations, much less at elevated concentrations. Increases in salinity may harm aquatic macroinvertebrates, which play important roles in stream food webs and are widely used as indicators of ecosystem health. Understanding how salinity affects aquatic insect growth, survival, and distribution is critical for developing effective criteria protective of aquatic life, but existing methods often rely on field surveys where multiple environmental factors covary, making it …

Soil Health On Utah's Farms And Ranches, Jenae Dean

All Graduate Theses and Dissertations, Fall 2023 to Present

The term soil health has gained popularity in agriculture due to prolonged droughts, rising food costs, and the growing public concern for sustainable and organic practices. Soil health practices can offer solutions to all of these pressures. This thesis provides Utah's farmers and ranchers with quantifiable data on implementing soil health practices in Utah's unique climate. It presents the first two years of on-farm trial results on yield and quality after implementing various soil health practices on five categories of crops: corn, mixed hay, alfalfa, produce, and dryland grain. Over a two-year period, none of the soil health practices resulted …

Water Conservation Strategies For Growing Ornamental Plants In Utah Landscapes, Jenny L. Koller

All Graduate Theses and Dissertations, Fall 2023 to Present

When early pioneers settled in Utah, they faced challenges living in a dry region with limited water. They built dams, canals, and irrigation systems by working together as a community to manage their water needs. However, adoption of European landscaping methods, farming and rapidly growing population increased water need while climate change and frequent drought reduced water supply.

Today, Utah is one of the driest states and uses more water per person than most other states in the nation. If things don't change, the state could run out of water by 2060. To address Utah's growing water challenges, this research …

Genwriter: Reducing Gender Cues In Biographies Through Text Rewriting, Shweta Soundararajan, Sarah Jane Delany

Conference papers

Gendered language is the use of words that indicate an individual’s gender. Though useful in certain context, it can reinforce gender stereotypes and introduce bias, particularly in machine learning models used for tasks like occupation classification. When textual content such as biographies contains gender cues, it can influence model predictions, leading to unfair outcomes such as reduced hiring opportunities for women. To address this issue, we propose GenWriter, an approach that integrates Case-Based Reasoning (CBR) with Large Language Models (LLMs) to rewrite biographies in a way that obfuscates gender while preserving semantic content. We evaluate GenWriter by measuring gender bias …

Identification Of Anti-Inflammatory Pathways Induced By Enterotoxin B Subunits For Use As Therapeutics In Inflammatory Bowel Disease, Hannah Juel Hedelius

Boise State University Theses and Dissertations

Vibrio cholerae’s AB5 enterotoxin, cholera toxin (CT), has a homopentameric, non-toxic B subunit (CTB). CTB is a well-known vaccine adjuvant used for its ability to create a strong immune response, however more recent studies have shown its ability to also behave in an anti-inflammatory manner, performing as a protective agent in a variety of different inflammatory diseases. Escherichia coli (E. coli) produces a heat-labile AB5 enterotoxin (LT) that is very homologous to CT, with its B subunit (LTB) being used in a similar manner as a vaccine adjuvant. There have been many studies comparing LTB to CTB due …

Enhancing Emotional Accuracy And Behavioral Novelty In Robot Behaviors: A Generative-Discriminative Approach, Rista Baral

Boise State University Theses and Dissertations

Recent advancements in language modeling have improved robotic emotion expressiveness, yet several challenges remain. Many existing robotic expression models rely on fixed rules and static frameworks, which limit their ability to capture the dynamic nature of emotional expression. Additionally, these systems often struggle to balance emotional accuracy with generating novel and varied behaviors. These limitations underscore the need for method capable of delivering both emotionally accurate and diverse robot behaviors.

In this thesis, we addresses these challenges by introducing a new framework for expressive behavior generation in robots. We develop a generative model that generates robot behavior sequences that align …

Social And Economic Gradients Of Resource Transfer Behavior In Gorongosa, Mozambique, Karl J. Mertens

Boise State University Theses and Dissertations

Why do people who experience the same environmental and social conditions vary so much in their resource transfer behavior? This dissertation addresses that question through examination of behavioral variation in subsistence horticulturalists in the dry tropical forest bufer conservation area of Gorongosa National Park in Mozambique. In this region of moderate and acute food shortages at both household and regional levels, individuals face similar challenges of addressing social and resource uncertainty yet respond with marked behavioral variation that cannot be explained solely by diferences in wealth, kinship, or reciprocity patterns.

Using a Behavioral Reaction Norms (Dingemanse et al., 2010) (BRN) …

Aging Effect On Effective Connectivity Within The Prefrontal-Motor Network And Postural-Related Muscle Responses During Dual-Task Paradigms, Jiahao Pan

Boise State University Theses and Dissertations

Falls are a significant global public issue for older adults, leading to severe health and social impacts. To understand the underlying mechanism of increased fall risk with aging, loss of postural automaticity has been suggested as increased prefrontal cortex and motor cortices activation, as well as worse balance performance in response to the secondary cognitive task. However, the interaction within these cortical regions and its effects on postural-related muscle responses are poorly understood. This dissertation investigated age-related changes in effective connectivity within the prefrontal-motor network, postural related lower limb muscle response, and biomechanical characteristics in response to the secondary cognitive …

Investigating Temporally Dynamic Models Of Choice In Rats And Bumblebees, Jack Van Allsburg

All Graduate Theses and Dissertations, Fall 2023 to Present

Temporally dynamic models of choice simulate how animals use past experience to make optimal decisions in variable environments. Chapter 1 briefly reviews a series of such modeling approaches and their mathematical properties. Extension of these models to longer experiments (more than 48 hours) designed to produce spontaneous recovery of choice (a behavioral phenomenon implicated in relapse) previously led to results not described well by current models. Chapter 2 comprises an empirical investigation of different explanations for these inconsistent results using rats, evaluating the effect of different test delays on preference following varied reward conditions. The results of the first two …

Effects Of Elevation, Fire Age, Burn Severity, And Pre-Fire Vegetation On Post-Fire Sagebrush Songbird Communities, William D. Harrod

All Graduate Theses and Dissertations, Fall 2023 to Present

The Sagebrush Biome of western North America has been threatened by a combination of interconnected threats. In the Great and Columbian Basins, a large portion of sagebrush loss has been due to an increase in higher-severity wildfires, caused by invasive annual grasses. As sagebrush declines, numerous wildlife species that rely on the biome have experienced similar trends. Sagebrush-adapted songbirds such as sage thrasher, Brewer's sparrow, and sagebrush sparrow as well as steppe-songbirds, have all experienced population declines. Currently, limited information exists as to how fire severity or recovery affect these songbirds or what resource managers can do to improve their …

Habitat Selection Analysis Of Mule Deer To Determine Efficacy Of The Coyote Bounty Program In Utah, Xaela M. Walden

All Graduate Theses and Dissertations, Fall 2023 to Present

Mule deer populations have been declining over the past couple of decades in many parts of the western United States. Often times, predators are blamed for the decreases in deer populations. Because of this, wildlife managers implement programs focused on reducing the number of predators on the landscape in an attempt to increase deer populations. However, predator removal programs have had mixed results, thus further investigation is needed to determine if coyote removals by the public through a bounty program have a positive effect on mule deer populations. My study investigated whether coyote removals through the bounty program in Utah …

Evaluating Cyanotoxins In Surface Water And Aerosols Near Utah Lake, Dylan R. Mcpeake

All Graduate Theses and Dissertations, Fall 2023 to Present

Utah Lake is a freshwater lake in Utah County near Provo, Utah. It is the third- largest lake in Utah and is important for recreation and local businesses. However, from June to October, the lake often has cyanobacteria harmful algal blooms (cHABs), which contain a toxin called cyanotoxin. These toxins can be dangerous to people who come into contact with the water. Government agencies regularly check for cHABs and warn people when the water is unsafe for activities like swimming. Collecting water samples to test for cHABs can be risky because it can possibly result in direct contact with the …

Evaluating The Effects Of Two Key Temporal Intervals During Pavlovian Training On Conditioned Reinforcement, Gabrielle M. Sutton

All Graduate Theses and Dissertations, Fall 2023 to Present

Reinforcers are anything that increases or maintains the frequency of a behavior that precedes their occurrence. Reinforcers can be separated into two types, primary and secondary. Primary reinforcers are biologically relevant stimuli like food, water, or drugs that can influence behavior without any prior training. Secondary reinforcers are those that impact behavior through their trained relationship with a primary reinforcer, like money and tokens. For this reason, they are also known as conditioned reinforcers. Conditioned reinforcers are used in therapies and training designed to increase desirable behaviors, but they are also involved in the development and maintenance of maladaptive behaviors …

Aquatic Habitat Representation For Robust Water Resources Management And Fish Conservation Decision-Making, Gregory C. Goodrum

All Graduate Theses and Dissertations, Fall 2023 to Present

We rely on rivers to provide water supply, flood control, and hydroelectricity for people and to sustain aquatic ecosystems. The development of dams and reservoirs to provide water for people did not consider environmental impacts to rivers, leading to widespread decline of freshwater species and habitat. Improving environmental outcomes of water management is needed to protect and restore aquatic ecosystems. However, rivers are complex and variable, making them difficult to represent as objectives for water management. This dissertation explores approaches to improve aquatic habitat representation and environmental objectives for water resources management and river conservation and restoration.

Chapter 2 uses …

Assessing Long-Term Changes In Aspen Forest Cover In Northern Yellowstone National Park Before And After Carnivore Recovery, Nicholas J. Bergeron

All Graduate Theses and Dissertations, Fall 2023 to Present

The recovery of large carnivores (wolves, bears, cougars) in Yellowstone National Park and the subsequent decline of the area's elk herd have raised key questions about ecosystem restoration—particularly for species such as aspen, which are heavily browsed by elk. Following wolf reintroduction in the mid-1990s, scientists began tracking changes in browsing intensity and height of young aspen within sampling plots, assuming reduced browsing and taller stems were signs of population recovery. However, no studies have measured whether the total area covered by aspen stands actually increased, as would be expected with broader recovery. Moreover, the potential influence of climate change …

Warfare And Woodlands: Tracing Environmental And Military History In The Hürtgen Forest, Cedar Williams

All Graduate Theses and Dissertations, Fall 2023 to Present

This thesis explores what happens when war enters a forest. From 1944 to 1945, American and German forces fought a long, brutal battle in the Hürtgen Forest near Germany’s western border. The dark, wet, and heavily wooded terrain made the fighting unusually difficult. Soldiers struggled not just with enemy fire, but with freezing rain, deep mud, low visibility, and constant stress. The forest shaped how the battle unfolded and intensified its hardships.

But the war’s impact on the forest continued long after the soldiers left. Unexploded bombs and artillery shells littered the ground. During a heatwave in 1947, many of …

Authentic Digital Writing Parameters In College Composition: Design, Implementation, And Assessment Of A Culture Jam, Mary Ellen Greenwood

All Graduate Theses and Dissertations, Fall 2023 to Present

As technology reshapes communication, college classrooms must adapt to prepare students for writing in a quickly changing world. This dissertation investigates how authentic writing—writing that feels meaningful, relevant, and tied to real-world purposes—can enhance student motivation, confidence, and writing skills in college composition courses.

The study introduces a multimodal assignment called a Culture Jam, where five participants critiqued and remixed media messages, such as advertisements or social media posts, to create their own critical digital compositions. Over three weeks, participants created their Culture Jams, shared feedback with peers, and reflected on their experiences. This project focused on five key elements …