Digital Commons Network^™

Cognitive Load Detection Using Ci-Ssa For Eeg Signal Decomposition And Nature-Inspired Feature Selection, Jammisetty Yedukondalu, Lakhan Dev Sharma

Turkish Journal of Electrical Engineering and Computer Sciences

Cognitive load detection is eminent during the mental assignment of neural activity because it indicates how the brain reacts to stimuli. The level of cognitive load experienced during mental arithmetic tasks can be determined using an electroencephalogram (EEG). The EEG data were collected from publicly available datasets, namely, mental arithmetic task (MAT) and simultaneous task workload (STEW). The first phase comprises decomposing the electroencephalogram (EEG) signal into intrinsic mode functions (IMFs) using circulant singular spectrum analysis (Ci-SSA). In the second phase, entropy-based features were evaluated using IMFs. After that, the extracted features were fed to nature-inspired feature selection algorithms: genetic …

Thermodynamic And Kinetic Modeling Of Electrocatalytic Reactions Using A First-Principles Approach, M. Vasanthapandiyan, Shagun Singh, Fernanda Bononi, Oliviero Andreussi, Naiwrit Karmodak

Chemistry and Biochemistry Faculty Publications and Presentations

The computational modeling of electrochemical interfaces and their applications in electrocatalysis has attracted great attention in recent years. While tremendous progress has been made in this area, however, the accurate atomistic descriptions at the electrode/electrolyte interfaces remain a great challenge. The Computational Hydrogen Electrode (CHE) method and continuum modeling of the solvent and electrolyte interactions form the basis for most of these methodological developments. Several posterior corrections have been added to the CHE method to improve its accuracy and widen its applications. The most recently developed grand canonical potential approaches with the embedded diffuse layer models have shown considerable improvement …

A Probabilistic View Of Protein Stability, Conformational Specificity, And Design, Jacob A. Stern, Tyler J. Free, Kimberlee L. Stern, Spencer Gardiner, Nicholas A. Dalley, Bradley Charles Bundy, Joshua L. Price, David Wingate, Dnnis Della Corte

Faculty Publications

Various approaches have used neural networks as probabilistic models for the design of protein sequences. These "inverse folding" models employ different objective functions, which come with trade-offs that have not been assessed in detail before. This study introduces probabilistic definitions of protein stability and conformational specificity and demonstrates the relationship between these chemical properties and the p(stucture|seq) Boltzmann probability objective. This links the Boltzmann probability objective function to experimentally verifiable outcomes. We propose a novel sequence decoding algorithm, referred to as “BayesDesign”, that leverages Bayes’ Rule to maximize the p(stucture|seq) objective instead of the p(seq|structure) objective common in inverse folding …

Machine Learning Techniques For The Identification Of Risk Factors Associated With Food Insecurity Among Adults In Arab Countries During The Covid-19 Pandemic, Radwan Qasrawi, Maha Hoteit, Reema Tayyem, Khlood Bookari, Haleama Al Sabbah, Iman Kamel, Somaia Dashti, Sabika Allehdan, Hiba Bawadi, Mostafa Waly, Mohammed O. Ibrahim, Stephanny Vicuna Polo, Diala Abu Al-Halawa

All Works

BACKGROUND: A direct consequence of global warming, and strongly correlated with poor physical and mental health, food insecurity is a rising global concern associated with low dietary intake. The Coronavirus pandemic has further aggravated food insecurity among vulnerable communities, and thus has sparked the global conversation of equal food access, food distribution, and improvement of food support programs. This research was designed to identify the key features associated with food insecurity during the COVID-19 pandemic using Machine learning techniques. Seven machine learning algorithms were used in the model, which used a dataset of 32 features. The model was designed to …

Disease Progression Modelling Of Alzheimer's Disease Using Probabilistic Principal Components Analysis, Martin Saint-Jalmes, Victor Fedyashov, Daniel Beck, Timothy Baldwin, Noel G. Faux, Pierrick Bourgeat, Jurgen Fripp, Colin L. Masters, Benjamin Goudey

Natural Language Processing Faculty Publications

The recent biological redefinition of Alzheimer's Disease (AD) has spurred the development of statistical models that relate changes in biomarkers with neurodegeneration and worsening condition linked to AD. The ability to measure such changes may facilitate earlier diagnoses for affected individuals and help in monitoring the evolution of their condition. Amongst such statistical tools, disease progression models (DPMs) are quantitative, data-driven methods that specifically attempt to describe the temporal dynamics of biomarkers relevant to AD. Due to the heterogeneous nature of this disease, with patients of similar age experiencing different AD-related changes, a challenge facing longitudinal mixed-effects-based DPMs is the …

Compatibility Of Clique Clustering Algorithm With Dimensionality Reduction, Ug ̆Ur Madran, Duygu Soyog ̆Lu

Applied Mathematics & Information Sciences

In our previous work, we introduced a clustering algorithm based on clique formation. Cliques, the obtained clusters, are constructed by choosing the most dense complete subgraphs by using similarity values between instances. The clique algorithm successfully reduces the number of instances in a data set without substantially changing the accuracy rate. In this current work, we focused on reducing the number of features. For this purpose, the effect of the clique clustering algorithm on dimensionality reduction has been analyzed. We propose a novel algorithm for support vector machine classification by combining these two techniques and applying different strategies by differentiating …

Modelling And Predicting Learners Numeracy Test Results Using Some Regression And Machine Learning Classifiers, Tlhalitshi Volition Montshiwa, Tshegofatso Botlhoko

Journal of Statistics Applications & Probability

The prediction of early childhood numeracy skills development is often studied by determining the learner’s performance in a numeracy test. It is an important study area since numeracy impacts on the learner’s mathematical and statistical abilities later in life. Despite having pros and cons over each other, classification algorithms are often applied in the prediction of early childhood numeracy skills development without justifying the choice of a certain algorithm over others. In this paper, the bi-directional stepwise logistic regression model (SLRM), hierarchical logistic regression model (HLRM), classification and regression tree (CART) and Naïve Bayes (NB) were compared in terms of …

Synthetic Image Generation And The Use Of Virtual Environments For Image Enhancement Tasks, Neil Patrick Del Gallego

Software Technology Dissertations

Deep learning networks are often difficult to train if there are insufficient image samples. Gathering real-world images tailored for a specific job takes a lot of work to perform. This dissertation explores techniques for synthetic image generation and virtual environments for various image enhancement/ correction/restoration tasks, specifically distortion correction, dehazing, shadow removal, and intrinsic image decomposition. First, given various image formation equations, such as those used in distortion correction and dehazing, synthetic image samples can be produced, provided that the equation is well-posed. Second, using virtual environments to train various image models is applicable for simulating real-world effects that are …

Predicting University Campus Parking Demand Using Machine Learning Models, Sohil Paudel, Matthew Vechione, Okan Gurbuz

Civil Engineering Faculty Publications and Presentations

Parking demand at university campuses has been an issue for decades and is gradually increasing each year. With limited capacity, space, and funds to expand parking facilities, there is a dire need to better understand parking behavior on a university campus so that universities can better utilize the limited resources available. One methodology that has been used by Metropolitan Planning Organizations to predict traveler behavior is known as travel demand modeling, where the most common modeling technique is a four-step procedure that utilizes socioeconomic data to predict current and future traffic volumes in a network (e.g., a city). This study …

Sentence Embedding Approach Using Lstm Auto-Encoder For Discussion Threads Summarization, Abdul Wali Khan, Feras Al-Obeidat, Afsheen Khalid, Adnan Amin, Fernando Moreira

All Works

Online discussion forums are repositories of valuable information where users interact and articulate their ideas and opinions, and share experiences about numerous topics. These online discussion forums are internet-based online communities where users can ask for help and find the solution to a problem. A new user of online discussion forums becomes exhausted from reading the significant number of irrelevant replies in a discussion. An automated discussion thread summarizing system (DTS) is necessary to create a candid view of the entire discussion of a query. Most of the previous approaches for automated DTS use the continuous bag of words (CBOW) …

Perceptions And Barriers To Adopting Artificial Intelligence In K-12 Education: A Survey Of Educators In Fifty States, Karen Woodruff, James Hutson, Kathryn Arnone

Faculty Scholarship

Artificial Intelligence (AI) is making significant strides in the field of education, offering new opportunities for personalized learning and access to education for a more diverse population. Despite this potential, the adoption of AI in K-12 education is limited, and educators’ express hesitancy towards its integration due to perceived technological barriers and misconceptions. The purpose of this study is to examine the perceptions of K-12 educators in all 50 states of the USA towards AI, policies, training, and resources related to technology and AI, their comfort with technology, willingness to adopt new technologies for classroom instruction, and needs assessment for …

Numerical Simulation Of Nonlinear Wave Equations With Machine Learning, Kristina O. F. Williams

Theses and Dissertations

A machine learning procedure is proposed to create numerical schemes for solutions of certain types of nonlinear wave equations on coarse grids. This method trains stencil weights of a discretization of the equation, with the truncation error of the scheme as the objective function for training. A neural network is used as a model for the stencil weights. The method uses centered finite differences to initialize the optimization routine and a second-order implicit-explicit time solver as a framework. Symmetry conditions are enforced on the learned operator to ensure a stable method. The procedure is applied to the Korteweg - de …

Methods Of Evaluating Quantum Phase Estimation Circuit Output, Charles A. Woodrum

Theses and Dissertations

The quantum phase estimation (QPE) algorithm is one of the most important quantum computing algorithms that has been developed. The QPE algorithm estimates the phase or phases of the eigenvalue or eigenvalues of a unitary operator. It is a critical step for applications like Shor’s algorithm for factoring and the HHL algorithm for solving linear systems of equations, but it remains difficult to implement on current quantum computers due to small numbers of logical qubits and high error rates. This investigation derives a more accurate estimation of the phase of a unitary operator than would otherwise be attained with the …

Advances In Quaternion-Valued Neural Networks, Jeremiah P. Bill

Theses and Dissertations

This dissertation investigates the construction, optimization, and application of quaternion neural networks (QNNs) to Department of Defense (DoD) related problem sets. QNNs are a type of neural network wherein the weights, biases, and input values are all represented as quaternion numbers. This work provides a critical evaluation of the myriad different quaternion backpropagation derivations that exist in the literature, testing the performance of each on a range of regression problem sets. The optimization dynamics of QNNs are explored, presenting visualizations of QNN loss surfaces and a novel method for assessing the “smoothness” of these loss surfaces. Finally, this dissertation presents …

Experimental Comparison Of Features, Analyses, And Classifiers For Android Malware Detection, Lwin Khin Shar, Biniam Fisseha Demissie, Mariano Ceccato, Naing Tun Yan, David Lo, Lingxiao Jiang, Christoph Bienert

Research Collection School Of Computing and Information Systems

Android malware detection has been an active area of research. In the past decade, several machine learning-based approaches based on different types of features that may characterize Android malware behaviors have been proposed. The usually-analyzed features include API usages and sequences at various abstraction levels (e.g., class and package), extracted using static or dynamic analysis. Additionally, features that characterize permission uses, native API calls and reflection have also been analyzed. Initial works used conventional classifiers such as Random Forest to learn on those features. In recent years, deep learning-based classifiers such as Recurrent Neural Network have been explored. Considering various …

On Predicting Esg Ratings Using Dynamic Company Networks, Gary Ang, Zhiling Guo, Ee-Peng Lim

Research Collection School Of Computing and Information Systems

Environmental, social and governance (ESG) considerations play an increasingly important role due to the growing focus on sustainability globally. Entities, such as banks and investors, utilize ESG ratings of companies issued by specialized rating agencies to evaluate ESG risks of companies. The process of assigning ESG ratings by human analysts is however laborious and time intensive. Developing methods to predict ESG ratings could alleviate such challenges, allow ESG ratings to be generated in a more timely manner, cover more companies, and be more accessible. Most works study the effects of ESG ratings on target variables such as stock prices or …

Thermodynamics Of Learning With Parametric Probabilistic Models, Shervin Sadat Parsi

Dissertations, Theses, and Capstone Projects

This study delves into the learning process within the Probabilistic Parametric Models (PPMs) framework from a unique thermodynamic perspective. By exploring the core concepts of thermodynamics and its innate connection with information theory, we showcase how this interdisciplinary approach can effectively contribute to the domain of machine learning. In the initial chapter, we establish the link between the learning problem in PPMs and a thermodynamic process by reframing various elements of the learning process within the context of thermodynamics. We introduce novel information-theoretic measurements that provide insights into the information learned in both the parameter space and the overall performance …

Harnessing The Power Of Neural Networks For The Investigation Of Solar-Driven Membrane Distillation Systems Under The Dynamic Operation Mode, Pooria Behnam, Masoumeh Zargar, Abdellah Shafieian, Amir Razmjou, Mehdi Khiadani

Research outputs 2022 to 2026

Accurate modeling of solar-driven direct contact membrane distillation systems (DCMD) can enhance the commercialization of these promising systems. However, the existing dynamic mathematical models for predicting the performance of these systems are complex and computationally expensive. This is due to the intermittent nature of solar energy and complex heat/mass transfer of different components of solar-driven DCMD systems (solar collectors, MD modules and storage tanks). This study applies a machine learning-based approach to model the dynamic nature of a solar-driven DCMD system for the first time. A small-scale rig was designed and fabricated to experimentally assess the performance of the system …

Reconstructing 42 Years (1979–2020) Of Great Lakes Surface Temperature Through A Deep Learning Approach, Miraj Kayastha, Tao Liu, Daniel Titze, Timothy C. Havens, Chenfu Huang, Pengfei Xue

Michigan Tech Publications

Accurate estimates for the lake surface temperature (LST) of the Great Lakes are critical to understanding the regional climate. Dedicated lake models of various complexity have been used to simulate LST but they suffer from noticeable biases and can be computationally expensive. Additionally, the available historical LST datasets are limited by either short temporal coverage (<30 >years) or lower spatial resolution (0.25° × 0.25°). Therefore, in this study, we employed a deep learning model based on Long Short-Term Memory (LSTM) neural networks to produce a daily LST dataset for the Great Lakes that spans an unparalleled 42 years (1979–2020) at …

Machine Learning-Based Classification Of Chronic Traumatic Brain Injury Using Hybrid Diffusion Imaging, Jennifer Muller, Ruixuan Wang, Devon Middleton, Mahdi Alizadeh, Kichang Kang, Ryan Hryczyk, George Zabrecky, Chloe Hriso, Emily Navarreto, Nancy Wintering, Anthony J. Bazzan, Chengyuan Wu, Daniel A. Monti, Xun Jiao, Qianhong Wu, Andrew B. Newberg, Feroze Mohamed

Marcus Institute of Integrative Health Faculty Papers

BACKGROUND AND PURPOSE: Traumatic brain injury (TBI) can cause progressive neuropathology that leads to chronic impairments, creating a need for biomarkers to detect and monitor this condition to improve outcomes. This study aimed to analyze the ability of data-driven analysis of diffusion tensor imaging (DTI) and neurite orientation dispersion imaging (NODDI) to develop biomarkers to infer symptom severity and determine whether they outperform conventional T1-weighted imaging.

MATERIALS AND METHODS: A machine learning-based model was developed using a dataset of hybrid diffusion imaging of patients with chronic traumatic brain injury. We first extracted the useful features from the hybrid diffusion imaging …

Intrusion Detection: Machine Learning Techniques For Software Defined Networks, Jacob S. Rodriguez

Masters Theses

In recent years, software defined networking (SDN) has gained popularity as a novel approach towards network management and architecture. Compared to traditional network architectures, this software-based approach offers greater flexibility, programmability, and automation. However, despite the advantages of this system, there still remains the possibility that it could be compromised. As we continue to explore new approaches to network management, we must also develop new ways of protecting those systems from threats. Throughout this paper, I will describe and test a network intrusion detection system (NIDS), and how it can be implemented within a software defined network. This system will …

Verifying Empirical Predictive Modeling Of Societal Vulnerability To Hazardous Events: A Monte Carlo Experimental Approach, Yi Victor Wang, Seung Hee Kim, Menas C. Kafatos

Institute for ECHO Articles and Research

With the emergence of large amounts of historical records on adverse impacts of hazardous events, empirical predictive modeling has been revived as a foundational paradigm for quantifying disaster vulnerability of societal systems. This paradigm models societal vulnerability to hazardous events as a vulnerability curve indicating an expected loss rate of a societal system with respect to a possible spectrum of intensity measure (IM) of an event. Although the empirical predictive models (EPMs) of societal vulnerability are calibrated on historical data, they should not be experimentally tested with data derived from field experiments on any societal system. Alternatively, in this paper, …

In Silico Prediction Of Acute Chemical Toxicity Of Biocides In Marine Crustaceans Using Machine Learning, Rama Krishnan, Ian S. Howard, Sean Comber, Awadhesh N. Jha

School of Engineering, Computing and Mathematics

Biocides are a heterogeneous group of chemical substances intended to control the growth or kill undesired organisms. Due to their extensive use, they enter marine ecosystems via non-point sources and may pose a threat to ecologically important non-target organisms. Consequently, industries and regulatory agencies have recognized the ecotoxicological hazard potential of biocides. However, the prediction of biocide chemical toxicity on marine crustaceans has not been previously evaluated. This study aims to provide in silico models capable of classifying structurally diverse biocidal chemicals into different toxicity categories and predict acute chemical toxicity (LC50) in marine crustaceans using a set of calculated …

A Multidimensional Connectomics- And Radiomics-Based Advanced Machine-Learning Framework To Distinguish Radiation Necrosis From True Progression In Brain Metastases, Yilin Cao, Vishwa S Parekh, Emerson Lee, Xuguang Chen, Kristin J Redmond, Jay J Pillai, Luke Peng, Michael A Jacobs, Lawrence R Kleinberg

Faculty, Staff and Student Publications

We introduce tumor connectomics, a novel MRI-based complex graph theory framework that describes the intricate network of relationships within the tumor and surrounding tissue, and combine this with multiparametric radiomics (mpRad) in a machine-learning approach to distinguish radiation necrosis (RN) from true progression (TP). Pathologically confirmed cases of RN vs. TP in brain metastases treated with SRS were included from a single institution. The region of interest was manually segmented as the single largest diameter of the T1 post-contrast (T1C) lesion plus the corresponding area of T2 FLAIR hyperintensity. There were 40 mpRad features and 6 connectomics features extracted, as …

Machine Learning Techniques For Analyzing Survival Data Of Breast Cancer Patients In Baghdad, Noor Ayad Mohammed, Entsar Arebe Fadam

Journal of Economics and Administrative Sciences

The Machine learning methods, which are one of the most important branches of promising artificial intelligence, have great importance in all sciences such as engineering, medical, and also recently involved widely in statistical sciences and its various branches, including analysis of survival, as it can be considered a new branch used to estimate the survival and was parallel with parametric, nonparametric and semi-parametric methods that are widely used to estimate survival in statistical research. In this paper, the estimate of survival based on medical images of patients with breast cancer who receive their treatment in Iraqi hospitals was discussed. Three …

Autonomous Shipwreck Detection & Mapping, William Ard

LSU Master's Theses

This thesis presents the development and testing of Bruce, a low-cost hybrid Remote Operated Vehicle (ROV) / Autonomous Underwater Vehicle (AUV) system for the optical survey of marine archaeological sites, as well as a novel sonar image augmentation strategy for semantic segmentation of shipwrecks. This approach takes side-scan sonar and bathymetry data collected using an EdgeTech 2205 AUV sensor integrated with an Harris Iver3, and generates augmented image data to be used for the semantic segmentation of shipwrecks. It is shown that, due to the feature enhancement capabilities of the proposed shipwreck detection strategy, correctly identified areas have a 15% …

Improving Xrd Analysis With Machine Learning, Rachel E. Drapeau

Theses and Dissertations

X-ray diffraction analysis (XRD) is an inexpensive method to quantify the relative proportions of mineral phases in a rock or soil sample. However, the analytical software available for XRD requires extensive user input to choose phases to include in the analysis. Consequently, analysis accuracy depends greatly on the experience of the analyst, especially as the number of phases in a sample increases (Raven & Self, 2017; Omotoso, 2006). The purpose of this project is to test whether incorporating machine learning methods into XRD software can improve the accuracy of analyses by assisting in the phase-picking process. In order to provide …

Multi-Color Fluorescent Microscopy And Deep Learning For Studying Eukaryotic Organelles: Unveiling Cellular Growth In A System Biology Perspective, Shixing Wang

Arts & Sciences Graduate Student Theses and Dissertations

Eukaryotic cells are building blocks to complex living systems, characterized by membrane-bound organelles. Studying how eukaryotic organelles react to cellular growth and size increase is crucial, but it demands biochemical and biophysical manipulations, as well as quantitative observation tools in microscopy. We developed a multi-color yeast strain with tagged fluorescent proteins, enabling systematic measurements of 6 organelles inside each cell using spectral confocal microscopy. These measurements provided insights into how organelle biogenesis is coordinated with cellular size and growth rate regulation via different signaling pathways. To explore cellular growth under dynamic conditions, I utilized deep learning for organelle recognition using …

A Predictive Flood Model For Urban Karst Groundwater Systems, Trayson Lawler

Masters Theses & Specialist Projects

Urban karst environments are often plagued by groundwater flooding, which occurs when water rises from the subsurface to the surface through the underlying caves and other karst features. The heterogeneity and interconnectedness of karst systems often makes them very unpredictable, especially during intense storm events; urbanization exacerbates the problem with the addition of many impervious surfaces. Residents in such areas are frequently disturbed and financially burdened by the effects of karst groundwater flooding. The Federal Emergency Management Agency (FEMA) offers limited protection to citizens living near flood-prone areas as they primarily focus on the areas near surface bodies of water. …

Novel Breath Collection Techniques For Detection Of Covid-19., James Morris

Electronic Theses and Dissertations

Volatile Organic Compounds (VOC) generated endogenously in the human body can be used to detect diseases that induce oxidative stress and inflammation. Breath analysis has been used for the detection of diseases such as COPD, Depression, Lung Cancer and most recently COVID-19. Methods such as Exhaled Breath Condensate (EBC), Sorbent Tubes, Solid Phase Microextraction (SPME), and silicon microreactors have shown considerable capability in extracting and concentrating trace VOC’s present in human breath. Silicon microreactors functionalized with capture agents to derivatize carbonyl compounds are effective but the overall maximum flow rate of breath sample possible during analysis is low, making direct …