Digital Commons Network^™

Operationalizing Camera-Based Hydrologic Monitoring With Ai And Edge Computing: Towards Real-Time Water Level And Discharge Measurements, Razin Bin Issa

All Graduate Theses and Dissertations, Fall 2023 to Present

Monitoring river water levels and flows is critical for managing water supplies, protecting against floods, supporting ecosystems, and informing infrastructure planning. However, traditional methods rely on sensors installed directly in rivers, which can be expensive, difficult to maintain, and vulnerable to damage—particularly in remote or hazardous locations. In many regions, limited budgets and access challenges result in large gaps in river monitoring networks.

This research explores an innovative alternative: using fixed cameras and artificial intelligence (AI) to monitor rivers from a distance. The approach allows for non-contact observation of water levels and flows by analyzing images captured by cameras installed …

Morphological Correlates Of Limaxivory In Contia (Serpentes: Dipsadinae) Compared To Related Taxa Carphophis And Diadophis, Lauren A. Houstoun

All Graduate Theses and Dissertations, Fall 2023 to Present

Differences in the skull and musculature of snakes can often be linked to their diet. Snakes that eat snails and slugs have evolved independently at least four times. Several skull features of the skull have already been reported in snakes that eat snails, specifically those in the genus Pareas and some Dipsadini. Among those features are a shorter, more compressed snout and, in some species, asymmetry of the lower jaw. However, little attention has been paid to snakes that specialize only on slugs (limaxivores). Unlike the snail-eating members of the Pareidae and Dipsadini, limaxivores lack the morphological traits associated with …

Investigating The E74-Mediated Regulation Of A Gata Factor In Aedes Aegypti Mosquitoes, Jacklyn Marie Estrada

Open Access Theses & Dissertations

The mosquito species Aedes aegypti has a significant impact on public health as a vector for multiple pathogens. Its ability to transmit deadly diseases, including Yellow Fever, Dengue Fever, and Zika, emphasizes the urgency of understanding its reproductive biology. In female mosquitoes, reproductive success hinges on obtaining a vertebrate blood meal, which triggers vitellogenesis - the synthesis of yolk protein precursors (YPPs) necessary for egg development. Without a blood meal, female Ae. aegypti remain in a state of previtellogenic arrest, where the YPP gene vitellogenin (Vg) is repressed by a type of transcriptional factor, GATAr (AaGATAr) (Attardo et al., 2003). …

Factors Influencing Swift Fox Reintroduction Success To Fort Belknap Reservation, Montana, Dana Nelson

All Dissertations

Reintroductions are an important conservation tool for reestablishing wildlife populations, and studying the factors influencing reintroduction outcomes is important to improving success rates over time. Swift fox are a small canid native to the short- and mixed grass prairies of western North America that have experienced severe population declines due to habitat loss and poisoning in the late 1800s. While swift fox now occupy approximately 40% of their historic range, reintroduction to northern Montana may promote the species’ long-term persistence, encourage connectivity in an existing range gap, and return species to areas where it is culturally significant. We studied the …

Effects Of Sediment Composition On Spartina Alterniflora And Juncus Roemerianus Productivity In Coastal Virginia: A Thin-Layer Sediment Placement Experiment, Caitlin Hemphill

Biological Sciences Theses & Dissertations

Climate change poses a major threat to the health of estuaries and their coastal wetland systems. The Chesapeake Bay’s coastal salt marshes are at high risk of inundation due to sea-level rise and land subsidence. Restoration techniques for maintaining coastal marsh resistance to sea-level rise are being developed and refined, with thin layer placement (TLP) emerging as a feasible solution in many areas of the United States. Despite TLPs use across the country, additional research is needed on species-specific responses, sediment types, and geographically focused studies in the lower Chesapeake Bay. My research addresses these gaps by combining both greenhouse …

Identification Of Crustose Coralline Algae Species In Florida And Their Ability To Induce Larval Settlement Of Caribbean Corals, Danielle Macias

All HCAS Student Capstones, Theses, and Dissertations

Crustose coralline algae (CCA) are a diverse, globally spread and yet poorly studied group of benthic organisms. They act as settlement cues for coral larvae, but this interaction is often species-specific, as CCA species can be either inducers or inhibitors to larval settlement and metamorphosis. Despite this importance, information on Caribbean CCA distribution, diversity, and impact on coral species is limited due to the difficulty in identifying them. In the present study, CCA samples were collected from seven different reef sites in the southeastern region of Florida’s Coral Reef and genetically identified using molecular analyses. Some of the samples collected …

Constructing Sculptural Wearables: Indigenous Steam Education At The Intersection Of Art And Science, Patricia Andersen

Theses and Dissertations

This paper describes an approach to STEAM education in which art is viewed as a unique discipline with distinct ways of thinking. The researchers developed and evaluated a STEAM education program to explore how art and science work together to expand and accelerate inventive thinking among Native American middle school students who participated in American Indian Services (AIS) Pre-Freshman Engineering Program (PREP). An important context of this project was the unique local environment and culture that included Diné (din-eh) culture in Gallup, NM. We hypothesize that integrating culturally responsive transdisciplinary art into an existing STEM summer program will increase students' …

Indirect Genetic Effects Among Neighbors Promote Cooperation And Accelerate Adaptation In A Small-Scale Human Society, Jordan S. Martin, Bret Beheim, Michael Gurven, Hillard Kaplan, Jonathan Stieglitz, Benjamin C. Trumble, Paul Hooper, Daniel K. Cummings, Daniel Eid Rodriguez, Adrian V. Jaeggi

ESI Publications

Explaining the rapid evolution of human cooperation and its role in our species’ biodemographic success remains a major evolutionary puzzle. To address this challenge, we tested a social drive hypothesis, which predicts that social plasticity and social selection in human groups cause indirect genetic effects that accelerate the adaptation of fitness, promoting population growth via feedback between the environmental causes and evolutionary consequences of cooperation. Using Bayesian multilevel models to analyze fertility data from a small-scale society, we demonstrate that density- and frequency-dependent indirect genetic effects on fitness promote the evolution of cooperation among neighboring women, increasing the rate of …

Spatial Ecology And Habitat Selection Of Eastern Pinesnakes: Case Study On The Importance Of Scale In Conservation Biology, Matthew Grisnik, Alan Jones, Rachel Brubaker, Andrew M. Grosse, Scott L. Parker

Biology

Species are in decline world-wide, driven by multiple factors including habitat fragmentation. Understanding the habitat selection processes of species in these fragmented landscapes has become a focus of ecological studies and is a major component of conservation plan development. However, understanding how landscape level processes influence patterns of habitat selection is often ignored. Here we assessed the influence of landscape level processes in the habitat selection of Eastern Pinesnakes, a species in decline, within a protected area in South Carolina, USA. Over the course of a year, we tracked 8 Eastern Pinesnakes within a small protected area. Snakes exhibited seasonal …

Using Triple Oxygen Isotopes To Investigate Water Usage In Desert Ecosystems, Cloe V. Knutson

Earth and Planetary Sciences ETDs

In arid environments, maintaining water balance can be more critical for survival than obtaining food. As droughts intensify, understanding how animals manage body water is essential. Triple oxygen isotope analysis provides a novel way to trace water sources in animals, distinguishing contributions from free water, food-derived oxygen, and atmospheric O₂. We developed an equilibration method using CO₂–H₂O oxygen exchange and measured δ^’18O and Δ^’17O values via tunable infrared laser direct spectroscopy (TILDAS). Validated against traditional fluorination methods, this technique enables streamlined analysis of whole blood and plant samples. Applied to …

Association Between Homelessness And Maternal Health Outcomes Among Non-Hispanic Black Women In Georgia, Miranda Weaver

Walden Dissertations and Doctoral Studies

Maternal health disparities among homeless non-Hispanic Black women in Georgia represent a critical public health concern, driven by inequitable access to care and elevated risks of adverse pregnancy outcomes. This study examined how homelessness influences perinatal care utilization (timing and frequency of prenatal visits and postpartum checkups) and pregnancy complications (gestational diabetes, hypertension, and depression), and whether these associations differ by geographic context (urban versus rural). Grounded in the Social Determinants of Health framework, the study used a quantitative cross-sectional design, analyzing secondary data (n = 1,540; weighted ≈ 203,571) from Phase 8 (2017–2021) of the Pregnancy Risk Assessment Monitoring …

Coastal Bird Community Change Following An Increase Of Pinnipeds At A Site In Northern Argentina: A 14-Year Study, María Paula Berón, Maximiliano Manuel Hernandez, Juan Pablo Seco Pon

Marine Ornithology

We report here changes in bird assemblages over a 14-year interval at the Port of Mar del Plata, Argentina, and the adjacent beach before (PRE) and after (POST) South American Sea Lions Otaria flavescens increased at a local haul-out. Abundance and number of bird species were compared between periods, between sites (beach, sea lion rookery, and port sheds), and between breeding and non-breeding seasons of the birds’ annual cycle. A total of 13 116 birds belonging to 15 species were recorded. Total bird abundance was higher during the POST period compared to the PRE period, regardless of the season. Larids …

Characterizing The Diet Of A Threatened Seabird, The Marbled Murrelet Brachyramphus Marmoratus, Using High-Throughput Sequencing, Emily D. Fountain, Paige J. Kulzer, Richard T. Golightly, James W. Rivers, Scott F. Pearson, Martin G. Raphael, Matthew G. Betts, S. Kim Nelson, Daniel D. Roby, Nicholas F. Kryshak, Stephanie Schneider, M. Zachariah Peery

Marine Ornithology

Understanding prey consumption patterns is critical to understanding the ways in which seabirds cope with a changing ocean. However, characterizing the dietary habitats of seabirds can be challenging. In this study, we investigated the diet of the Marbled Murrelet Brachyramphus marmoratus population that lives in waters off California, Oregon, and Washington, USA, using fecal DNA, custom metabarcoding, and high-throughput sequencing. Murrelets were captured at sea by dip-netting at night. Across this region, murrelets consumed highly diverse prey types including 17 fish species and 10 invertebrate species, in accord with previous work indicating the species’ forage on a wide range of …

Breeding Microhabitat Patterns Among Sympatric Tropical Larids, Antonio Garcia-Quintas, Dennis Denis, Christophe Barbraud, Sophie Lanco Bertrand

Marine Ornithology

The selection of breeding microhabitat (nesting sites) affects successful reproduction in seabirds, yet the process of nesting-site selection in sympatric tropical species remains poorly known. During the 2021 breeding season, we assessed nesting-site selection among five larid species at three cays of Cuba and quantified explanatory variables. Random forest classification models were used to assess which landscape features among eight variables best explained site selection by each species. Patterns were clear for most species, especially the highly gregarious Roseate Tern Sterna dougallii, Royal Tern Thalasseus maximus, and Sandwich Tern T. sandvicensis. Patterns were consistent among the study cays. Dominant plant …

The Potential Of Ecologists To Enhance Our Understanding Of Seabird Health, Melanie R. Wells, Annie Philips, Mary-Anne Lea, Scott Carver

Marine Ornithology

Ecologists play a pivotal role in the detection and investigation of population changes in seabirds and by doing so have significant potential to contribute to enhancing knowledge of seabird health. This review highlights key examples in the literature where ecologists have employed diligent passive health surveillance and/or undertaken targeted investigations of seabirds, strategies that have augmented our knowledge of seabird health at individual and population levels. Within the context of One Health, an integrated approach to perceiving and managing health, this review amalgamates veterinarian and ecology disciplines by summarising auxiliary metrics of clinical health that may be considered for incorporation …

The Influence Of Breeding Status And Nest Site Location On Marine Habitat Use By Marbled Murrelet Brachyramphus Marmoratus, Sonya A. Pastran, David B. Lank, Patrick D. O’Hara, Russell W. Bradley, Cecilia Lougheed, Lynn W. Lougheed, Nadine R. Parker, Laura A. Mcfarlane Tranquilla, Elizabeth A. Krebs, Fred Cooke, Douglas F. Bertram

Marine Ornithology

The Marbled Murrelet Brachyramphus marmoratus is a threatened seabird that relies on old-growth forest for nesting. We compare marine space use between breeding and non-breeding birds, and how marine home range locations and overlap vary with respect to nesting location and breeding status. We collected very high frequency (VHF) radio-telemetry data in southern British Columbia from Clayoquot Sound (190 birds; 2000–2002) and Desolation Sound (206 birds; 1998–2001). The sites differ strongly in their oceanic exposure and surrounding terrestrial features. Kernel utilization distribution-based estimates showed that breeders and non-breeders had similar overall distributions, but breeders were more spatially aggregated. Pooled home …

Diagnosis Of Hypothermia In Seabirds From Coastal California, Nancy L. Anderson

Marine Ornithology

This study established cloacal temperature (TCl) cut-off values to diagnose hypothermia in near shore seabirds rescued along the coast of California. All birds died when TCl was < 38.2 °C. When Aechmophorus grebes were excluded, 100% died when TCl was < 38.4 °C. Mortality increased 2–3× when TCl was lower than receiver operating curve-determined criteria for diagnosing hypothermia based on attitude: < 38.8 °C for mixed species, < 39.1 °C for Common Murres Uria aalge, and < 38.2 °C for Aechmophorus grebes. Reductions in TCl as small as 1.0 °C had significant physiologic effects.

Longevity Records For The Brown Booby Sula Leucogaster And Flesh-Footed Shearwater Ardenna Carneipes, Vincent H.S. Yap, Lillian G. Stewart, Silke Stuckenbrock, Andrew L. Fidler, Jennifer L. Lavers

Marine Ornithology

Longevity records for seabirds are vital to understanding population demography but are often limited due to the relatively short duration of many monitoring programs. Here, we present new longevity records for two seabird species: 32.2 years (Queensland, Australia) for the Brown Booby Sula leucogaster and 33.9 years (New Zealand) for the Flesh-footed Shearwater Ardenna carneipes, alongside existing longevity data. While these new records represent the oldest known birds to date, we suggest that they reflect typical adult lifespans of these species, i.e., 25–30 years, and reinforce the need for ongoing monitoring efforts.

Population Decline And Breeding Distribution Changes Of Magnificent Frigatebirds Fregata Magnificens In Baja California Sur, Gerardo Marrón, Adriana Hernández-Alvarez, Roberto Carmona, Sergio Águila

Marine Ornithology

The Magnificent Frigatebird Fregata magnificens (MaFr) is a tropical seabird species that is widely distributed along the mid-latitude coasts of the Americas. Historically, its most important breeding location has been Estero Las Tijeras in the Magdalena Lagoon complex (MLC), Baja California Sur, Mexico. Our recent data indicate a severe (~96%) population decline at this location. In 2002–2003, 33535 MaFr were counted in all of the MLC, and historical data (1985–1986) support the maintenance of consistently high numbers of MaFr in this region over time. Yet, MaFr abundance dropped severely—to ~1 200 individuals—in 2015. This low abundance persisted into 2017, when …

Camera Trapping Reveals Cooperative Breeding In The Red-Footed Booby Sula Sula, Matthieu Le Corre, Morgane Manoury, Sabine Orlowski, Florent Bignon, Gabrielle Dicque

Marine Ornithology

Cooperative breeding occurs in only 9% of bird species and is particularly rare among seabirds. We provide evidence that cooperative breeding occurs in a tropical seabird, the Red-footed Booby. Through camera monitoring of active nests, we found one nest in which a chick was raised by a trio of birds: its two parents and an immature bird. The immature bird fed the chick, guarded it, and preened it. The parents did not behave aggressively towards the immature bird when it approached the chick, suggesting that this trio was stable and composed of birds that knew each other. The growth of …

Status Of Craveri’S Murrelet Synthliboramphus Craveri In The Midriff Islands, Gulf Of California, Mexico, Francisco Jaime Martínez Reyes, Lauren A. Dolinski, Lorayne R. Meltzer, Paulina De L. Camarena Gomez, Noah L. Oas

Marine Ornithology

The Craveri's Murrelet Synthliboramphus craveri is an endangered seabird (family Alcidae) endemic to northwestern Mexico, where it breeds on rocky islands throughout the Gulf of California (GOC). Nesting records are scarce for most of these islands, and much of the available information relies on historical data collected more than 50 years ago. Beginning in 2009 through to 2023, we performed intermittent nest searches on five islands in the Midriff Islands of the GOC. Starting in 2018 on Alcatraz Island and starting in 2022 on San Pedro Mártir Island, we monitored nests to determine average clutch size and hatching success. We …

Decrypting The Breeding Biology Of The Elusive And Declining Tahiti Petrel Pseudobulweria Rostrata, Angelique Pagenaud, Karen Bourgeois, Léna Payandi, Wilfried Weiss, Éric Vidal, Andreas Ravache

Marine Ornithology

Among procellariids, the Tahiti Petrel Pseudobulweria rostrata is one of the most endangered and least known species. Its global populations are declining, yet demographic and ecological studies remain scarce. Understanding the breeding cycle and behavior of Tahiti Petrel adults and chicks is essential to develop effective protection measures. To address this knowledge gap, Tahiti Petrel colonies of various sizes were studied at three sites in New Caledonia, with extensive sampling at two main sites and limited sampling at a third. A total of 157 burrows were monitored for up to two years using endoscopic cameras and camera traps. This allowed …

Ecological Correlates Of Reproduction Of A Bet-Hedging Seabird, The Kittlitz’S Murrelet Brachyramphus Brevirostris, Michelle L. Kissling, Paul M. Lukacs, Grey W. Pendleton, Jonathan J. Felis, Scott M. Gende, Stephen B. Lewis

Marine Ornithology

For longer-lived species, individuals hedge their bets by skipping breeding when conditions are poor to preserve the opportunity for future breeding attempts. Thus, understanding the ecological drivers behind the ‘choice’ to reproduce or not is a key step in identifying and diagnosing causes of population change. We investigated both marine and terrestrial factors that might influence whether Kittlitz’s Murrelets Brachyramphus brevirostris—a long-lived seabird of conservation concern that is often associated with glacially-influenced habitats—choose to breed in a given year. We used a suite of proxies to explain variation in reproductive metrics of radio-tagged Kittlitz’s Murrelets, exploring three hypotheses related to …

Environmental Advocacy As An Occupation: Perceived Self-Efficacy And Occupational Justice In Community Programming, Emma Sims, Laura H. Vanpuymbrouck

The Open Journal of Occupational Therapy

Background: Current occupational therapy literature demonstrates a gap in knowledge of environmental advocacy as an occupation, which directly impacts occupational justice in those experiencing environmental racism or discrimination. This study’s purpose was to provide foundational information on the importance of advocacy work in the sphere of environmental and occupational justice through the lived experiences of those directly involved in community environmental advocacy.

Method: Qualitative data was collected via three focus groups using semi-structured interviews focused on perceptions of participant experiences in environmental advocacy occupations. Thematic analysis was used to identify themes relating to research questions.

Results: When …

Integrating Belowground Recovery Into Tropical Forest Restoration Design And Monitoring, Lauren Toro, Leland K. Werden, Shalom D. Addo-Danso, Kelly M. Andersen, Sarah Batterman, Matilde M. Bragadini, Pooja Choksi, Rebecca J. Cole, Liza S. Comita, Daniela Cusack, Daisy H. Dent, Lee H. Dietterich, Joshua B. Fisher, Katrin Fleischer, Lucia Fuchslueger, Nohemi Huanca-Nunez, Janey R. Lienau, Lindsay A. Mcculloch, Ember M. Morrissey, Jennifer S. Powers, Mareli Sánchez-Juliá, Oscar Valverde-Barrantes, Anita Weissflog, Michelle Y. Wong

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

There is growing recognition that tropical forest restoration is key for sequestering carbon and enhancing ecosystem resilience. Soils, roots, and soil biota are central to ecosystem function and services, but belowground recovery is largely overlooked in restoration monitoring frameworks. Here, we outline current understanding of the links between above- and belowground recovery in tropical forests by examining how belowground properties before and after intervention influence recovery; by evaluating whether aboveground recovery can serve as a proxy for belowground dynamics; and by proposing a blueprint for monitoring dynamic soil physical (bulk density, aggregate stability), chemical (organic matter or carbon, pH), and …

The Kentucky Microbiome Dataset, Rachel L. Washburn, Douglas C. Curl

Research Data--KGS

The Kentucky Microbiome Dataset is a continuously updated geolocated dataset which describes the distribution and diversity of microorganisms across the Commonwealth of Kentucky. Each geolocated point represents a location reported in the peer-reviewed literature where microorganisms were sampled from soil, water, geologic substrates, or clinical settings. Environmental studies include only non-host-associated, non-clinical microorganisms sampled from natural environments. Clinical studies are mapped separately to highlight locations where investigations into host-associated or human health-related microbes have occurred.

For each location, associated metadata include study information, taxonomic classifications, sample type, sampling method, latitude and longitude, sampling date, publication reference, and a direct link …

Pola Sebaran Spasial Pada Kejadian Stunting Di Provinsi Lampung Tahun 2019 -2023, R Nasrullah Nur Nugroho, Indang Trihandini, Martya Rahmaniati Makful

Jurnal Biostatistik, Kependudukan, dan Informatika Kesehatan

Stunting merupakan gangguan pertumbuhan dan perkembangan yang dialami anak-anak akibat gizi buruk, infeksi berulang dan stimulasi psikososial yang tidak memadai. Menurut Survei Kesehatan Indonesia (SKI) 2023, prevalensi stunting di Indonesia sebesar 21,5%, sementara Lampung 14,9% yang menempatkannya pada posisi ke-empat terendah setelah Bali, Jambi dan Riau. Penelitian ini bertujuan untuk menganalisis pola sebaran spasial dan autokorelasi spasial kejadian stunting di Provinsi Lampung tahun 2019–2023 dengan pendekatan studi ekologi. Sampel penelitian adalah 13 kabupaten dan 2 kota di Provinsi Lampung. Metode analisis spasial yang digunakan adalah Moran’s I untuk mengukur autokorelasi spasial global dan Local Indicators of Spatial Association (LISA) untuk …

Conflict And Compromise, Discourse And Action: Political Ecology In The Complexity Of Land Management In Central Kalimantan, Indonesia, Salsa Rizkia Meilinda, Darmawan Salman, Sawedi Muhammad

Forest and Society

Peatlands in Mantangai District, Central Kalimantan, have emerged as a site of contention among many stakeholders with differing interests, illustrating the intricacies of natural resource management in Indonesia. This research seeks to examine the contestation process, identify main actors, and comprehend how various forms of knowledge and power influence the results of peatland management. This research employs a case study method with a qualitative approach, incorporating direct observation, in-depth interviews, and document analysis to achieve a thorough knowledge of the dynamics of contestation. The findings indicate three primary viewpoints in peatland management: eco-conservationism exemplified by Mawas Borneo Orangutan Survival Foundation …

The Impact Of Genetic Ancestry On Survival Outcomes In Pediatric Rhabdomyosarcoma: A Report From The Children’S Oncology Group, Ekene A Onwuka, Christina L Magyar, Bailey A Martin-Giacalone, Michael E Scheurer, Deborah A Marquez-Do, Mark Zobeck, Elizabeth G Atkinson, Erin R Rudzinski, Michael A Arnold, Donald A Barkauskas, David Hall, Javed Khan, Jack F Shern, Paul Scheet, Brian Crompton, Corinne M Linardic, Douglas S Hawkins, Rajkumar Venkatramani, Lisa Mirabello, Chad D Huff, Melissa A Richard, Philip J Lupo

Faculty, Staff and Student Publications

Emerging evidence suggests genetic ancestry may influence childhood cancer outcomes, but its impact on pediatric rhabdomyosarcoma (RMS) is unknown. We explored genetic ancestry's impact on survival among children with RMS. This multi-center observational cohort study is a secondary analysis of previously collected biobanking, genomic, and clinical data. The study included 920 individuals with newly diagnosed RMS under 40 years of age enrolled from 2005 to 2017 under the COG soft tissue sarcoma biobanking protocol D9902. The primary endpoints were (1) event-free survival (EFS), defined as the time from study enrollment to tumor recurrence/progression, secondary malignancy, or death from any cause; …

Community Members’ Perspectives On A Community-Engaged Process For Supporting Vibrant Greenspaces In Detroit, Alysha D. Matthews, Guilherme Hebling Costa, Karl Erickson, Karin A. Pfeiffer, Amber L. Pearson, Benjamin V. Dougherty

Journal of Community Engagement and Higher Education

Greenspaces provide several well-being (Dinnie et al., 2013) and psychosocial benefits (Addy et al., 2004). Community-engaged research affords community partners a voice in the project (Cushman et al., 2004). This study assessed Detroit community members’ perceived benefits of and suggestions for engaging with the community to support greenspaces. Through qualitative analysis, a three-step process for community-engaged planning was revealed. Findings highlight strategies that involve community members in this process to enhance community engagement and well-being.