Digital Commons Network^™

Structural Phylogenetics Of A Family Dna Polymerases, Yagmur Bingul

Honors Theses

The transition from the RNA to the DNA world stands as an important event, demanding the emergence of enzymatic activities for DNA precursor synthesis, retro-transcription of RNA templates, and replication of single and double-stranded DNA molecules. The distribution of protein families associated with these activities across the three domains of life—Archaea, Eukarya, and Bacteria—adds layers of complexity to the narrative. While Archaea and Eukarya often share similar protein structures, structural biology shows homologous, but distinct, structures in Bacteria. On the other hand, viral polymerases emerge as a crucial part of genome replication and transcription. Their versatility, including RNA-dependent RNA polymerase, …

Taylor, Genealogy, History, Peter Hawes

Honors Theses

In this paper I compare two different genealogies of the idea of the ‘self’: Charles Taylor’s and Michel Foucault’s. I begin by arguing that Taylor’s focus on combating what he calls “subtraction stories” places him in the genealogical tradition with Foucault. I then engage with Foucault's genealogy of the self, which illuminates how the notion of the ‘self’ was constructed as a means of control, which leads him to say we should do away with trying to understand it outside of relations of power. This call for the rejection of the self, I suggest, presents a problem for us, who …

Assessing Evolution Of Reproduction Traits Along Seasonal Transitions And Latitudinal Gradients In An Invasive Species Of Fruit Fly, Zaprionus Indianus, Ansleigh Gunter

Honors Theses

This thesis examines the reproductive traits of Zaprionus indianus, an invasive species to the United States, to assess the possibility of rapid evolution. Significant differences in fecundity and diapause incidence have been seen in other Drosophilid fly species across the seasonal transition, from early to late season, and across the latitudinal gradient, from north to south. For this reason, fecundity, the reproductive ability of a female fly, and diapause incidence, a stress-induced reproductive arrest, were selected as variables of choice. Field collections and experiments revealed unexpected patterns in fecundity and diapause incidence, challenging initial hypotheses. While no significant differences in …

Heterocycles As Peptide-Based Cleavable Linkers, John Blobe

Honors Theses

As cancer cases continue to rise, the need for advancing the treatment options for cancer is ever increasing. Current cancer therapeutics, while effective at treating localized cancers and a fraction of advanced cancers, generally lack the specificity needed to target more advanced cancers. Recent advancements in cancer treatments have leveraged antibodies to target certain cancers. A class of drugs that utilize antibodies to deliver anti-cancer therapy preferentially to cancer cells, termed antibody-drug conjugates (ADCs), have been quite effective in treating certain advanced forms of certain cancers. These ADCs could be more effective if they could allow for the facile release …

Annual Report 2023-2024, Tennessee. Bureau Of Investigation

Annual Report

No abstract provided.

Annual Report 2023-2024, Tennessee. Bureau Of Investigation

Annual Report

No abstract provided.

Environmental Monitoring Plan For Work To Be Perormed July 1, 2024, Through June 30, 2025, Tennessee. Department Of Environment And Conservation.

Environmental Monitoring Report

No abstract provided.

Applications Of Computational Intelligence And Data Fusion Techniques For Biomedical Images, Anand Krishnadas Nambisan

Doctoral Dissertations

"The realm of melanoma diagnosis has been significantly advanced by deep learning (DL) techniques, yet the current approaches are not without limitations, including missed diagnoses and the challenge of interpreting these "black box" models. The research is comprised of three studies, each contributing uniquely towards advancing melanoma detection accuracy and interpretability. The first study focuses on improving the detection of specific dermoscopic structures through a deep learning-based segmentation approach, while the second study builds upon this by employing a fusion technique that combines traditional image features with advanced deep learning models. This method significantly improves melanoma detection, particularly in recall …

Gender Roles In Natural Resource Use In Madagascar, Sarahana Shrestha, Cortni Borgerson, Be Jean Rodolph Rasolofoniaina

Department of Anthropology Faculty Scholarship and Creative Works

Understanding gender roles in natural resource use is essential for culturally-tailored effective conservation. Despite its conservation priority, little is known about the gender roles of forest product use in Madagascar. This study used over seven years of data from 1,255 interviews on the extraction, use, and sale of forest, freshwater, and marine resources, to examine gender roles. We found that gender significantly affects natural resource use in Madagascar. While men were primarily responsible for natural resource collection, women collected nearly all resources in at least one household. Both genders collected resources, with subsistence use as the primary incentive for resource …

State Politics And Stress Amongst Lgbtq+ Students At Florida’S Private Colleges: A Psychological And Normative Analysis, Alise Fortune

Honors Program Theses

The recent wave of anti-LGBTQ+ politics and policies in Florida pose potential risks to the mental health and well-being of Florida’s LGBTQ+ students. The present study surveyed LGBTQ+ students attending private colleges in Florida to measure their self-reported stress levels in comparison to non-LGBTQ+ students, the level at which they believed specific sources of stress contributed to their stress levels, their level of distress upon experiencing discrimination, their sense of sexual identity distress, and their awareness of and involvement in advocacy against Florida’s anti-LGBTQ+ bills. Survey results suggested that anti-LGBTQ+ politics in Florida and the personal lives (social and family …

Perception, Attention, And Action! A New Perspective On The Associations Found In Educational Expertise And Visual Search, Ashley Sawyer

Honors Program Theses

Expertise as defined in literature is the peak or otherwise exceptionally high levels of performance on a particular task or within a given domain (Papesh et al., 2021). In this study, expertise is defined as the time length the individual has spent in their field. For the purpose of this research, an expert can exist in a plethora of fields ranging from history and music to mathematics or science. Becoming an expert requires for the individual to not only have the mental and cognitive concepts that come with acquiring this type of knowledge, but it also incorporates skills they know …

Emotional Throwing: Decision Making And Emotion In The Dual-Process Theory, Eve Wasil

Honors Program Theses

The dual process theory of decision-making describes system 1 as automatic and system 2 as controlled (Frankish & Evans, 2009). While much research has been conducted on system 2 and emotional arousal, little is known about how arousal affects the more automatic, gut-feeling processes of system 1. Through galvanic skin response (GSR), a system 1 ball throwing task, and a system 2 trolley problem survey, this study measured emotional arousal’s effect on both systems in conjunction with one another. Results revealed minimal effects of emotion on system 1 and system 2, leaving room for speculation as to the robustness of …

Treatment With The Immunocontraceptive Vaccine, Gonacon, Induces Temporary Fertility Control In Free-Ranging Prairie Dog Populations In Colorado, Usa, Aaron B. Shiels, Jackson Runte, Emily W. Ruell, Douglas C. Eckery, Gary W. Witmer, Daniel J. Salkeld

United States Department of Agriculture Wildlife Services: Staff Publications

Context

Prairie dogs (Cynomys spp.) are rodents enjoyed by some humans; yet, they cause crop and property damage, and carry zoonotic disease. Non-lethal control of prairie dogs is of interest in urban/suburban settings. The injectable immunocontraceptive vaccine GonaCon (active ingredient is gonadotropin-releasing hormone [GnRH]) has been shown to be effective at reducing fertility in equine and deer, and is a US EPA-registered vaccine for use in these ungulate species.

Aims

To conduct a replicated field study to test efficacy of GonaCon in black-tailed prairie dogs (C. ludovicianus), and if found to be efficacious, to help facilitate …

Comparison Of Ketamine-Xylazine, Butorphanol-Azaperone-Medetomidine, And Nalbuphine-Medetomidine-Azaperone For Raccoon (Procyon Lotor) Immobilization, Shylo R. Johnson, Christine K. Ellis, Chad Wickham, Molly R. Selleck, Amy T. Gilbert

United States Department of Agriculture Wildlife Services: Staff Publications

Raccoons (Procyon lotor) are frequently handled using chemical immobilization in North America for management and research. In a controlled environment, we compared three drug combinations: ketamine-xylazine (KX), butorphanol-azaperone-medetomidine (BAM), and nalbuphinemedetomidine- azaperone (NalMed-A) for raccoon immobilization. In crossover comparisons, raccoons received a mean of the following: 8.66 mg/kg ketamine and 1.74 mg/kg xylazine (0.104 mL/kg KX); 0.464 mg/kg butorphanol, 0.155 mg/kg azaperone, and 0.185 mg/kg medetomidine (0.017 mL/kg BAM); and 0.800 mg/kg nalbuphine, 0.200 mg/kg azaperone, and 0.200 mg/kg medetomidine (0.020 mL/kg NalMed-A). Induction time was shortest with KX (mean6SE, 10.060.7 min) and longest with NalMed-A (13.061.3 min). …

Seroprevalence, Blood Chemistry, And Patterns Of Canine Parvovirus, Distemper Virus, Plague, And Tularemia In Free-Ranging Coyotes (Canis Latrans) In Northern New Mexico, Usa, Leah M. White, Suzanne J. Gifford, Gail Kaufman, Eric M. Gese, Mark A. Peyton, Robert R. Parmenter, James W. Cain Iii

United States Department of Agriculture Wildlife Services: Staff Publications

Wildlife diseases have implications for ecology, conservation, human health, and health of domestic animals. They may impact wildlife health and population dynamics. Exposure rates of coyotes (Canis latrans) to pathogens such as Yersinia pestis, the cause of plague, may reflect prevalence rates in both rodent prey and human populations. We captured coyotes in north-central New Mexico during 2005–2008 and collected blood samples for serologic surveys. We tested for antibodies against canine distemper virus (CDV, Canine morbillivirus), canine parvovirus (CPV, Carnivore protoparvovirus), plague, tularemia (Francisella tularensis), and for canine heartworm (Dirofilaria immitis) antigen. Serum …

Wildlife Vaccination Strategies For Eliminating Bovine Tuberculosis In White-Tailed Deer Populations, Aakash Pandey, Abigail B. Feuka, Melinda Cosgrove, Megan Moriarty, Anthony Duffiney, Kurt C. Vercauteren, Henry Campa Iii, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

No abstract provided.

Biodistribution Analysis Of Peptide-Coated Magnetic Iron Nanoparticles: A Simple And Quantitative Method, Pavithra Natarajan, Katherine Horak, Jennifer Rowe, Sungmin Yoon, Joshua Lingo, John M. Tomich, Sherry D. Fleming

United States Department of Agriculture Wildlife Services: Staff Publications

Biodistribution tracks compounds or molecules of interest in vivo to understand a compound’s anticipated efficacy and safety. Nanoparticles deliver nucleic acid and drug payloads and enhance tumor permeability due to multiple properties such as high surface area to volume ratio, surface functionalization, and modifications. Studying the in vivo biodistribution of nanoparticles documents the effectiveness and safety of nanoparticles and facilitates a more application-driven approach for nanoparticle development that allows for more successful translation into clinical use. In this study, we present a relatively simple method to determine the biodistribution of magnetic iron nanoparticles in mice. In vitro, cells take up …

Using Prescribed Fire And Biosolids Applications As Grassland Management Tools: Do Wildlife Respond?, Brian E. Washburn, Michael J. Begier

United States Department of Agriculture Wildlife Services: Staff Publications

Prescribed burning is a management tool commonly used in forested ecosystems in the southeastern United States, but the influence of this method on grassland vegetation and wildlife in this geographic region is unknown. During 2009–2015, we conducted a study to determine if the application of prescribed burning and/or long-term biosolid applications alter plant communities and/or wildlife use of grassland areas at Marine Corps Air Station Cherry Point, Havelock, North Carolina. We monitored vegetation growth, measured plant community composition, and documented wildlife activity in four study plots for 3 years after the implementation of annual winter prescribed burns. Prescribed burning reduced …

Potential Landscape Connectivity For Invasive Wild Pigs (Sus Scrofa) Across The Northern Prairies Of North America, Corey J. Kramer, Melanie R. Boudreau, Ryan Powers, Kurt C. Vercauteren, Ryan S. Miller, Ryan K. Brook

United States Department of Agriculture Wildlife Services: Staff Publications

Understanding landscape scale connectivity is an essential component in the management of invasive species since connectivity facilitates their invasion potential. Invasive wild pigs (Sus scrofa) are among the most prolific invaders on the planet, causing billions of dollars in agricultural and environmental damage annually. Newly introduced to Canada in the 1980s, we examined wild pig invasion potential across the northern prairies from western Canada into the currently wild pig-free northern U.S. states. We used GPS collar data collected in the Canadian prairies to quantify resource selection and incorporated results into an electric circuit theory framework to evaluate potential …

Rapid Point-Of-Care Testing For Detection Of Antibodies To Toxoplasma Gondii In Black Vultures And Ring-Billed Gulls From Pennsylvania, Alexa Rosypal Von Dohlen, Sydney Randall, Jordyan Grays, Mark A. Dugo, Brian J. Hunt, Justin Brown, Kyle Van Why, Sawsan Ammar, Richard Gerhold

United States Department of Agriculture Wildlife Services: Staff Publications

Toxoplasma gondii is a zoonotic protozoan parasite that infects most warm-blooded animals, including birds. Scavenging birds are epidemiologically important hosts because they can serve as indicators of environmental T. gondii levels. A rapid point-of-care (POC) test that detects antibodies to T. gondii in humans is commercially available. In this research, we assessed the ability of the human POC test to detect anti–T. gondii antibodies in 106 black vultures (Coragyps atratus) and 23 ring-billed gulls (Larus delawarensis) from Pennsylvania, USA. Serum samples were tested with the POC test and compared to the modified …

Low Secondary Risks For Turkey Vultures From A Sodium Nitrite Toxic Bait For Wild Pigs, Justin A. Foster, John C. Kinsey, Michael J. Lavelle, Kurt C. Vercauteren, Nathan P. Snow

United States Department of Agriculture Wildlife Services: Staff Publications

An acute and orally‐delivered toxic bait for wild pigs (Sus scrofa) containing sodium nitrite (SN) is being developed and tested for potential registration in the U.S. We evaluated oral toxicity of SN and risk of secondary consumption in a common avian scavenger, the turkey vulture (Carthartes aura), by 1) conducting an acute oral toxicity test (LD₅₀) for turkey vultures by oral gavage, and 2) allowing turkey vultures to feed on whole carcasses and digestive tracts of wild pigs that died from consuming SN‐laden bait. Captive tests were conducted during fall 2016 and spring 2017 in the …

A Method For Characterizing Disease Emergence Curves From Paired Pathogen Detection And Serology Data, Joshua Hewitt, Grete Wilson-Henjum, Derek T. Collins, Jourdan M. Ringenberg, Christopher A. Quintanal, Robert Pleszewski, Jeffrey C. Chandler, Thomas J. Deliberto, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

1. Wildlife disease surveillance programs and research studies track infection and identify risk factors for wild populations, humans and agriculture. Often, several types of samples are collected from individuals to provide more complete information about an animal's infection history. Methods that jointly analyse multiple data streams to study disease emergence and drivers of infection via epidemiological process models remain underdeveloped. Joint-analysis methods can more thoroughly analyse all available data, more precisely quantifying epidemic processes, outbreak status, and risks.

2. We contribute a paired data modelling approach that analyses multiple samples from individuals. We use ‘characterization maps’ to link paired data …

Torque Teno Sus Virus 1: A Potential Surrogate Pathogen To Study Pig-Transmitted Transboundary Animal Diseases, Xiaolong Li, Brandon M. Parker, Raoul K. Boughton, James C. Beasley, Timothy J. Smyser, James D. Austin, Kim M. Pepin, Ryan S. Miller, Kurt C. Vercauteren, Samantha M. Wisely

United States Department of Agriculture Wildlife Services: Staff Publications

Understanding the epidemiology and transmission dynamics of transboundary animal diseases (TADs) among wild pigs (Sus scrofa) will aid in preventing the introduction or containment of TADs among wild populations. Given the challenges associated with studying TADs in free-ranging populations, a surrogate pathogen system may predict how pathogens may circulate and be maintained within wild free-ranging swine populations, how they may spill over into domestic populations, and how management actions may impact transmission. We assessed the suitability of Torque teno sus virus 1 (TTSuV1) to serve as a surrogate pathogen for molecular epidemiological studies in wild pigs by investigating …

Common Grackle (Quiscalus Quiscula) Predation Of A Great Lakes Piping Plover (Charadrius Melodus) Nest And Its Conservation Implications, Jade R. Arneson, Dennis A. Peloquin, Thomas G. Prestby, Sarah P. Saunders

United States Department of Agriculture Wildlife Services: Staff Publications

Common grackle (Quiscalus quiscula) was observed consuming eggs from an exclosed (protected) Great Lakes piping plover (Charadrius melodus) nest in the lower bay of Green Bay, Lake Michigan in Wisconsin, USA during June 2023. The observation, captured by a trail camera, is the first photographic documentation of grackle predation in any of the three piping plover breeding populations. This behavior adds common grackle to the suite of egg predators and has critical implications for this shorebird species, particularly in the Great Lakes region where piping plover is listed as federally endangered and common grackles are relatively …

Esthetic Preferences Of Orthodontists, General Dentists, And Laypersons For Indian Facial Profiles: A Cross-Sectional Study, Harshini Reddy, Ritesh Singla, Nishu Singla, Madhumitha Natarajan

Open Access archive

Background: Disparity in the esthetic perceptions between a patient and clinician could result in patient dissatisfaction with orthodontic treatment outcomes. The aim of this study was to compare the perceptions of a group of orthodontists, general dentists, and laypersons about the attractiveness of Indian facial profiles. Methods: In this study, a male and a female participants’ photographs and lateral cephalograms were digitally manipulated by inserting them into Dolphin software; we considered four soft tissue parameters at a nasolabial angle, upper lip E-line, lower lip E-line, and pg-pg’, so that 20 profiles were created for each model. A visual analog scale …

An Unreported Variant Of Palmaris Longus Muscle, Satheesha Badagabettu Nayak, Vasanthakumar Packiriswamy, Soumya Kodimajalu Vasudeva

Open Access archive

Palmaris longus is a highly variable muscle of the forearm. Knowledge of its variability is of importance to plastic surgeons, hand surgeons and radiologists. During our routine dissection classes for undergraduate medical students, a peculiar palmaris longus muscle was noted in the left upper limb of an adult male cadaver. The muscle had a fleshy belly in the middle and two tendons: a proximal and distal. The distal tendon of palmaris longus gave origin to a variant fleshy slip of muscle which was inserted partly to the pisiform bone and partly merged with the hypothenar muscles. The ulnar nerve and …

A Bibliometric Review Of Functional Ingredients And Their Efficacy In Developing Functional Biscuits, Kshama Vishwakarma, Varalakshmi Chandra Sekaran, Vidya Patwardhan, Asha Kamath

Open Access archive

Introduction: Numerous studies have concluded that the functional ingredients benefit human health. Similarly, present times have seen exponential growth in functional food in bakery product segments like breads and biscuits. However, there is a lack of information on functional ingredients and their usefulness in developing functional bakery products. This bibliometric study addresses this gap by identifying the current research trends in functional ingredients. Objective: To investigate current research trends on functional ingredients and their usefulness in developing functional biscuits. Method: The study followed the “Scientific Procedures and Rationales for Systematic Literature Reviews” standards for retrieving literature. The study went through …

A Study Of Association Between Early Menarche And Anxiety In Undergraduate Students, Poorva Bakshi, Sharanya B. Shetty, Abira Sharma, K. G. Vasudha

Open Access archive

Background: Anxiety has been reported to be one of the most common epidemics in recent years. The present study focused on understanding the association between early menarche and the prevalence of anxiety and anxiety symptoms among adult undergraduate students. Methods: This was an observational, case-control study. The sample included 146 young female adults aged more than or equal to 18 years pursuing the Bachelor of Medicine and Bachelor of Surgery (MBBS) and Bachelor of Dental Sciences (BDS). Using an online questionnaire, participants were asked to recall and enter the age at which they attained menarche. We used the Generalized Anxiety …

Poweromin X Ten, A Polyherbal Formulation Improves Male Sexual Function: In Vivo And Network Pharmacology Study, Sree Lalitha Bojja, Kiran Kumar Kolathur, Bhim Bahadur Chaudhari, Gangadhar Hari

Open Access archive

Introduction: Poweromin X Ten (PXT) is a polyherbal formulation, traditionally used to enhance male sexual function. However, the safety and benefits of PXT have not been scientifically evaluated. Therefore, the present study investigated the toxicity and aphrodisiac potential of PXT in male rats and explored its principal mechanisms of action. Methods: Male Wistar rats were orally administered PXT (50 or 100 mg/kg) for 28 days, and sexual activity parameters, including latency and frequency of mounting and intromissions, were studied. The reproductive toxicity and spermatogenic potential were also examined. Furthermore, dopamine and serotonin levels in brain regions associated with sexual activity …

Ann-Based Predictive Modelling Of The Effect Of Abrasive Water-Jet Parameters On The Surface Roughness Of Az31 Mg Alloy, Deepak Doreswamy, Subraya Krishna Bhat, K. Raghunandana, Pavan Hiremath

Open Access archive

In today’s world, there is an acute need to increase the usage of ecologically sustainable materials like AZ31 magnesium (Mg) alloy, possessing high strength-to-weight ratio and biocompatibility. However, its machinability through conventional machining techniques remains a challenge due to its high flammability. AWJM of Mg alloys is a promising method in this scenario. The present study investigated the effects of three important operating parameters, viz., stand-off distance (SOD), feed rate, and number of passes on the surface roughness parameters (Ra, Rq and Rz). Experiments were conducted based on Taguchi’s L9 orthogonal array, and the effects of parameters on Ra, Rq …