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2023

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Accuracy And Trueness Of Exporting Computer Aided Designs Of 3-Unit Fixed Dental Prosthesis By 3 Cad Systems, Ezzat Abou-Alnaga, Ashraf Hussein, Ahmed Naguib, Shereen Ahmed Nossair Jul 2023

Accuracy And Trueness Of Exporting Computer Aided Designs Of 3-Unit Fixed Dental Prosthesis By 3 Cad Systems, Ezzat Abou-Alnaga, Ashraf Hussein, Ahmed Naguib, Shereen Ahmed Nossair

Future Dental Journal

Objectives: Computer-aided design (CAD) software programs offer the option to export 3D scans and designs across different CADCAM systems, commonly referred to as open CADCAM technology. However, there is insufficient evidence of whether this exporting procedure has an impact on the accuracy of digital designs.This study aimed to investigate the accuracy of exporting of computer aided designs (CAD) of three-unit fixed dental prosthesis using 3 CAD systems. Materials and Methods: Three CAD softwares (inLab 17™, CeraMill Mind™, Dental System 2017™) were used to generate designs of a three-unit fixed partial denture. The designs generated by each CAD software were exported …

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A Thermodynamics-Based Versatile Evapotranspiration Estimation Method Of Minimum Data Requirement For Water Resources Investigations, Jozsef Szilagyi, Richard D. Crago Jul 2023

A Thermodynamics-Based Versatile Evapotranspiration Estimation Method Of Minimum Data Requirement For Water Resources Investigations, Jozsef Szilagyi, Richard D. Crago

School of Natural Resources: Faculty Publications

A recent, two-parameter version of the thermodynamically derived complementary relationship (CR) of evaporation has been tested on a monthly basis at 124 FLUXNET stations around the globe. Local, station-by-station calibration explained 91% (R2) of the variance in eddy-covariance (EC) obtained latent-heat fluxes with the same Nash-Sutcliffe efficiency (NSE) value. When the dimensionless Priestley-Taylor parameter (α) was expressed as a universal function (f) of the estimated wet-environment air temperature (Tw), station-by-station calibration of the single dimensionless parameter, b (accounting for moisture advection), yielded an R2 value of 87% and NSE of 86%. Global calibration (all stations …

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Trackable And Scalable Lc-Ms Metabolomics Data Processing Using Asari., Shuzhao Li, Amnah Siddiqa, Maheshwor Thapa, Yuanye Chi, Shujian Zheng Jul 2023

Trackable And Scalable Lc-Ms Metabolomics Data Processing Using Asari., Shuzhao Li, Amnah Siddiqa, Maheshwor Thapa, Yuanye Chi, Shujian Zheng

Faculty Research 2023

Significant challenges remain in the computational processing of data from liquid chomratography-mass spectrometry (LC-MS)-based metabolomic experiments into metabolite features. In this study, we examine the issues of provenance and reproducibility using the current software tools. Inconsistency among the tools examined is attributed to the deficiencies of mass alignment and controls of feature quality. To address these issues, we develop the open-source software tool asari for LC-MS metabolomics data processing. Asari is designed with a set of specific algorithmic framework and data structures, and all steps are explicitly trackable. Asari compares favorably to other tools in feature detection and quantification. It …

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Tenure And Promotion Announcement, 2023, University Of Mississippi. Provost Jul 2023

Tenure And Promotion Announcement, 2023, University Of Mississippi. Provost

Tenure and Promotion Announcements

No abstract provided.

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Elucidating Interprotein Energy Transfer Dynamics Within The Antenna Network From Purple Bacteria, Dihao Wang, Olivia C. Fiebig, Dvir Harris, Hila Toporik, Yi Ji, Chern Chuang, Muath Nairat, Ashley L. Tong, John I. Ogren, Stephanie M. Hart, Jianshu Cao, James N. Sturgis, Yuval Mazor, Gabriela S. Schlau-Cohen Jul 2023

Elucidating Interprotein Energy Transfer Dynamics Within The Antenna Network From Purple Bacteria, Dihao Wang, Olivia C. Fiebig, Dvir Harris, Hila Toporik, Yi Ji, Chern Chuang, Muath Nairat, Ashley L. Tong, John I. Ogren, Stephanie M. Hart, Jianshu Cao, James N. Sturgis, Yuval Mazor, Gabriela S. Schlau-Cohen

Chemistry: Faculty Publications

In photosynthesis, absorbed light energy transfers through a network of antenna proteins with near-unity quantum efficiency to reach the reaction center, which initiates the downstream biochemical reactions. While the energy transfer dynamics within individual antenna proteins have been extensively studied over the past decades, the dynamics between the proteins are poorly understood due to the heterogeneous organization of the network. Previously reported timescales averaged over such heterogeneity, obscuring individual interprotein energy transfer steps. Here, we isolated and interrogated interprotein energy transfer by embedding two variants of the primary antenna protein from purple bacteria, light-harvesting complex 2 (LH2), together into a …

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High Glucose-Upregulated Pd-L1 Expression Through Ras Signaling-Driven Downregulation Of Ptrh1 Leads To Suppression Of T Cell Cytotoxic Function In Tumor Environment, Chenggang Gao, Jiaoshun Chen, Jianwei Bai, Haoxiang Zhang, Yanyi Tao, Shihong Wu, Hehe Li, Heshui Wu, Qiang Shen, Tao Yin Jul 2023

High Glucose-Upregulated Pd-L1 Expression Through Ras Signaling-Driven Downregulation Of Ptrh1 Leads To Suppression Of T Cell Cytotoxic Function In Tumor Environment, Chenggang Gao, Jiaoshun Chen, Jianwei Bai, Haoxiang Zhang, Yanyi Tao, Shihong Wu, Hehe Li, Heshui Wu, Qiang Shen, Tao Yin

School of Graduate Studies Faculty Publications

Background: Nearly 80% of patients with pancreatic cancer suffer from glucose intolerance or diabetes. Pancreatic cancer complicated by diabetes has a more immunosuppressive tumor microenvironment (TME) and is associated with a worse prognosis. The relationship between glucose metabolism and programmed cell death-Ligand 1 (PD-L1) is close and complex. It is important to explore the regulation of high glucose on PD-L1 expression in pancreatic cancer and its effect on infiltrating immune effectors in the tumor microenvironment. Methods: Diabetic murine models (C57BL/6) were used to reveal different immune landscape in euglycemic and hyperglycemic pancreatic tumor microenvironment. Bioinformatics, WB, iRIP [Improved RNA Binding …

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Phenylpropionic Acid Produced By Gut Microbiota Alleviates Acetaminophen-Induced Hepatotoxicity, Sungjoon Cho, Xiaotong Yang, Kyoung-Jae Won, Vanessa A. Leone, Eugene B. Chang, Grace Guzman, Hyunwoo Lee, Hyungyoung Jeong Jul 2023

Phenylpropionic Acid Produced By Gut Microbiota Alleviates Acetaminophen-Induced Hepatotoxicity, Sungjoon Cho, Xiaotong Yang, Kyoung-Jae Won, Vanessa A. Leone, Eugene B. Chang, Grace Guzman, Hyunwoo Lee, Hyungyoung Jeong

Purdue University Libraries Open Access Publishing Fund

The gut microbiota affects hepatic drug metabolism. However, gut microbial factors modulating hepatic drug metabolism are largely unknown. In this study, using a mouse model of acetaminophen (APAP)-induced hepatotoxicity, we identified a gut bacterial metabolite that controls the hepatic expression of CYP2E1 that catalyzes the conversion of APAP to a reactive, toxic metabolite. By comparing C57BL/6 substrain mice from two different vendors, Jackson (6J) and Taconic (6N), which are genetically similar but harbor different gut microbiotas, we established that the differences in the gut microbiotas result in differential susceptibility to APAP-induced hepatotoxicity. 6J mice exhibited lower susceptibility to APAP-induced hepatotoxicity …

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Women's Interracial Friendships: Cultivating Coalitional Possibilities Across Difference Through Dialogue, Akie Fukushige Wenk Jul 2023

Women's Interracial Friendships: Cultivating Coalitional Possibilities Across Difference Through Dialogue, Akie Fukushige Wenk

LSU Doctoral Dissertations

In my dissertation, I thread through the macro-structure as well as micro-operations of hegemonic ideologies, namely white-supremacist capitalist cis-hetero patriarchy (hooks, 1995, Valdes, 1996), that has historically plagued the United States, eventually gaining a global reach over time. I center interracial friendship between Black and White cis-women, where I locate coalitional possibilities that begin at the grassroots level. I situate this interracial relationship within the socio-ecological system where the personal meets the social (including racialized backgrounds). I use a series of analogies to equate these ideologies as toxins in the air, water, and soil. Soil is where we can work …

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Morphological And Molecular Characterization Of The Olfactory System In The Formosan Subterranean Termite, Paula Castillo Jul 2023

Morphological And Molecular Characterization Of The Olfactory System In The Formosan Subterranean Termite, Paula Castillo

LSU Doctoral Dissertations

The Formosan subterranean termite, Coptotermes formosanus, is a eusocial insect species. Its members live in colonies consisting of reproductive (queen and king) and non-reproductive individuals (workers and soldiers). Olfaction is an essential sense for the social life of many insects. However, in termites, little is known about how olfactory cues are perceived in the peripheral sensory system (antennae) and processed in the central nervous system (brain) to elicit different behavioral responses across castes. In this study, we investigated the olfactory system in all castes (soldiers, workers, and reproductive alates), from the antennal and brain morphology to the antennal gene …

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Tissue Resident Regulatory T Cells And Immunopathology During Influenza Infections, Michael Mcgee Jul 2023

Tissue Resident Regulatory T Cells And Immunopathology During Influenza Infections, Michael Mcgee

LSU Doctoral Dissertations

Influenza (flu) virus infections are a leading cause of respiratory illness. Globally there are approximately 290,000-650,000 deaths and 3-5 million cases of severe illness during the average flu season. Severe flu infection is associated with the combination of a strong pro-inflammatory and weak anti-inflammatory response. Regulatory T cell subsets suppress pro-inflammatory responses during flu infection, with production of the immunomodulatory cytokine IL-10 playing a critical role in this process. Tissue resident regulatory T cell subsets are maintained within nonlymphoid tissues and are optimally positioned to suppress localized pro-inflammatory responses. However, knowledge of the signaling pathways regulating the development of tissue …

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Predicted Structure And Functional Roles Of Alphaherpesvirus Tegument Protein Ul37 In Virion Morphogenesis And Innate Immunity, Therese Marie Collantes Jul 2023

Predicted Structure And Functional Roles Of Alphaherpesvirus Tegument Protein Ul37 In Virion Morphogenesis And Innate Immunity, Therese Marie Collantes

LSU Doctoral Dissertations

Several members of the Family Herpesviridae are clinically significant pathogens, affecting humans and a wide range of animals. Alphaherpesviruses infect epithelial cells at the primary site of infection and subsequently invade adjacent sensory neurons. Infectious bovine rhinotracheitis (IBR) is an economically important disease caused by bovine herpesvirus 1 (BoHV-1), which belongs to the subfamily Alphaherpesvirinae, genus Varicellovirus. To date, vaccination is the only preventive measure against IBR. Understanding determinants of herpesvirus replication and innate immune regulation is important to help further develop vaccines that are efficacious and incapable of establishing latency in the host nervous system. The alphaherpesvirus …

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Emt Activates Exocytotic Rabs To Coordinate Invasion And Immunosuppression In Lung Cancer, Guan-Yu Xiao, Xiaochao Tan, Bertha L Rodriguez, Don L Gibbons, Shike Wang, Chao Wu, Xin Liu, Jiang Yu, Mayra E Vasquez, Hai T Tran, Jun Xu, William K Russell, Cara Haymaker, Younghee Lee, Jianjun Zhang, Luisa Solis, Ignacio I Wistuba, Jonathan M Kurie Jul 2023

Emt Activates Exocytotic Rabs To Coordinate Invasion And Immunosuppression In Lung Cancer, Guan-Yu Xiao, Xiaochao Tan, Bertha L Rodriguez, Don L Gibbons, Shike Wang, Chao Wu, Xin Liu, Jiang Yu, Mayra E Vasquez, Hai T Tran, Jun Xu, William K Russell, Cara Haymaker, Younghee Lee, Jianjun Zhang, Luisa Solis, Ignacio I Wistuba, Jonathan M Kurie

Faculty, Staff and Student Publications

Epithelial-to-mesenchymal transition (EMT) underlies immunosuppression, drug resistance, and metastasis in epithelial malignancies. However, the way in which EMT orchestrates disparate biological processes remains unclear. Here, we identify an EMT-activated vesicular trafficking network that coordinates promigratory focal adhesion dynamics with an immunosuppressive secretory program in lung adenocarcinoma (LUAD). The EMT-activating transcription factor ZEB1 drives exocytotic vesicular trafficking by relieving Rab6A, Rab8A, and guanine nucleotide exchange factors from miR-148a-dependent silencing, thereby facilitating MMP14-dependent focal adhesion turnover in LUAD cells and autotaxin-mediated CD8

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All That Is Cyber Melts Into Control: A Rhetorical Analysis Of Cybernetic Metaphors, Cem İsmail Addemir Jul 2023

All That Is Cyber Melts Into Control: A Rhetorical Analysis Of Cybernetic Metaphors, Cem İsmail Addemir

Theses and Dissertations

This thesis historicizes and interprets the logic of cybernetics as a communication technology and how it shaped notions of control in the mid-20th century. To situate my analysis, I focus on cybernetics, the tradition within communication studies that focuses on controlling communication through the application of feedback loops to a particular system. Since the discovery and popularization of cybernetics by the late 1950s, its central logic has been widely applied to computational technology and influenced future systems theories. Specifically, my thesis employs a rhetorical examination of cybernetic metaphors through metaphor criticism to trace the genealogy of cybernetic discourses that I …

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Transitioning Statistical Iterative Dual-Energy Ct Reconstruction To The Clinic: Artifact Reduction And Machine Learning-Based Acceleration, Tao Ge Jul 2023

Transitioning Statistical Iterative Dual-Energy Ct Reconstruction To The Clinic: Artifact Reduction And Machine Learning-Based Acceleration, Tao Ge

McKelvey School of Engineering Graduate Student Theses & Dissertations

Over the past few decades, dual-energy X-ray computed tomography (DECT) imaging has undergone significant advancements, mainly attributed to its remarkable ability to differentiate between different materials. In contrast to conventional X-ray computed tomography (CT), DECT employs two measurements acquired at distinct spectra, enabling the generation of highly informative and precise images, including material decomposition maps, virtual non-contrast images, and stopping-power maps for proton treatment plans. Image-domain decomposition (IDD) is a widely utilized technique in DECT imaging, assuming that low- and high-energy images can be represented as linear combinations of material decomposition maps on an element-wise basis. On the other hand, …

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When A Calorie Is Not Just A Calorie: Diet Quality And Timing As Mediators Of Metabolism And Healthy Aging, Maria M Mihaylova, Amandine Chaix, Mirela Delibegovic, Jon J Ramsey, Joseph Bass, Girish Melkani, Rajat Singh, Zheng Chen, William W Ja, Michele Shirasu-Hiza, Mary N Latimer, Julie A Mattison, Anna E Thalacker-Mercer, Vishwa Deep Dixit, Satchidananda Panda, Dudley W Lamming Jul 2023

When A Calorie Is Not Just A Calorie: Diet Quality And Timing As Mediators Of Metabolism And Healthy Aging, Maria M Mihaylova, Amandine Chaix, Mirela Delibegovic, Jon J Ramsey, Joseph Bass, Girish Melkani, Rajat Singh, Zheng Chen, William W Ja, Michele Shirasu-Hiza, Mary N Latimer, Julie A Mattison, Anna E Thalacker-Mercer, Vishwa Deep Dixit, Satchidananda Panda, Dudley W Lamming

Faculty, Staff and Student Publications

An epidemic of obesity has affected large portions of the world, increasing the risk of developing many different age-associated diseases, including cancer, cardiovascular disease, and diabetes. In contrast with the prevailing notion that "a calorie is just a calorie," there are clear differences, within and between individuals, in the metabolic response to different macronutrient sources. Recent findings challenge this oversimplification; calories from different macronutrient sources or consumed at different times of day have metabolic effects beyond their value as fuel. Here, we summarize discussions conducted at a recent NIH workshop that brought together experts in calorie restriction, macronutrient composition, and …

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High Throughput Single Cell Long-Read Sequencing Analyses Of Same-Cell Genotypes And Phenotypes In Human Tumors, Cheng-Kai Shiau, Lina Lu, Rachel Kieser, Kazutaka Fukumura, Timothy Pan, Hsiao-Yun Lin, Jie Yang, Eric L Tong, Gahyun Lee, Yuanqing Yan, Jason T Huse, Ruli Gao Jul 2023

High Throughput Single Cell Long-Read Sequencing Analyses Of Same-Cell Genotypes And Phenotypes In Human Tumors, Cheng-Kai Shiau, Lina Lu, Rachel Kieser, Kazutaka Fukumura, Timothy Pan, Hsiao-Yun Lin, Jie Yang, Eric L Tong, Gahyun Lee, Yuanqing Yan, Jason T Huse, Ruli Gao

Faculty, Staff and Student Publications

Single-cell nanopore sequencing of full-length mRNAs transforms single-cell multi-omics studies. However, challenges include high sequencing errors and dependence on short-reads and/or barcode whitelists. To address these, we develop scNanoGPS to calculate same-cell genotypes (mutations) and phenotypes (gene/isoform expressions) without short-read nor whitelist guidance. We apply scNanoGPS onto 23,587 long-read transcriptomes from 4 tumors and 2 cell-lines. Standalone, scNanoGPS deconvolutes error-prone long-reads into single-cells and single-molecules, and simultaneously accesses both phenotypes and genotypes of individual cells. Our analyses reveal that tumor and stroma/immune cells express distinct combination of isoforms (DCIs). In a kidney tumor, we identify 924 DCI genes involved in …

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A Global Study For Acute Myeloid Leukemia With Rarg Rearrangement, Hong-Hu Zhu, Ya-Zhen Qin, Zhang-Lin Zhang, Yong-Jing Liu, Li-Jun Wen, M James You, Cheng Zhang, Esperanza Such, Hong Luo, Hong-Jian Yuan, Hong-Sheng Zhou, Hong-Xing Liu, Reng Xu, Ji Li, Jian-Hu Li, Jian-Ping Hao, Jie Jin, Liang Yu, Jing-Ying Zhang, Li-Ping Liu, Le-Ping Zhang, Rui-Bin Huang, Shu-Hong Shen, Su-Jun Gao, Wei Wang, Xiao-Jing Yan, Xin-You Zhang, Xin Du, Xiao-Xia Chu, Yan-Fang Yu, Yi Wang, Ying-Chang Mi, Ying Lu, Zhen Cai, Zhan Su, David Christopher Taussig, Suzanne Macmahon, Edward D Ball, Huan-You Wang, John S Welch, C Cameron Yin, Gautam Borthakur, Miguel A Sanz, Hagop M Kantarjian, Jin-Yan Huang, Jiong Hu, Su-Ning Chen Jul 2023

A Global Study For Acute Myeloid Leukemia With Rarg Rearrangement, Hong-Hu Zhu, Ya-Zhen Qin, Zhang-Lin Zhang, Yong-Jing Liu, Li-Jun Wen, M James You, Cheng Zhang, Esperanza Such, Hong Luo, Hong-Jian Yuan, Hong-Sheng Zhou, Hong-Xing Liu, Reng Xu, Ji Li, Jian-Hu Li, Jian-Ping Hao, Jie Jin, Liang Yu, Jing-Ying Zhang, Li-Ping Liu, Le-Ping Zhang, Rui-Bin Huang, Shu-Hong Shen, Su-Jun Gao, Wei Wang, Xiao-Jing Yan, Xin-You Zhang, Xin Du, Xiao-Xia Chu, Yan-Fang Yu, Yi Wang, Ying-Chang Mi, Ying Lu, Zhen Cai, Zhan Su, David Christopher Taussig, Suzanne Macmahon, Edward D Ball, Huan-You Wang, John S Welch, C Cameron Yin, Gautam Borthakur, Miguel A Sanz, Hagop M Kantarjian, Jin-Yan Huang, Jiong Hu, Su-Ning Chen

Faculty, Staff and Student Publications

Acute myeloid leukemia (AML) with retinoic acid receptor γ (RARG) rearrangement has clinical, morphologic, and immunophenotypic features similar to classic acute promyelocytic leukemia. However, AML with RARG rearrangement is insensitive to alltrans retinoic acid (ATRA) and arsenic trioxide (ATO) and carries a poor prognosis. We initiated a global cooperative study to define the clinicopathological features, genomic and transcriptomic landscape, and outcomes of AML with RARG rearrangements collected from 29 study groups/institutions worldwide. Thirty-four patients with AML with RARG rearrangements were identified. Bleeding or ecchymosis was present in 18 (54.5%) patients. Morphology diagnosed as M3 and M3v accounted for 73.5% and …

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Phytoplankton Responses To Dust Addition In The Femn Co-Limited Eastern Pacific Sub-Antarctic Differ By Source Region, Neil J. Wyatt, Antony Birchill, Simon Ussher, Angela Milne, Heather A. Bouman, Elizabeth Shoenfelt Troein, Katsiaryna Pabortsava, Alan Wright, Oliver Flanagan, Thomas S. Bibby, Adrian Martin, Cm Moore Jul 2023

Phytoplankton Responses To Dust Addition In The Femn Co-Limited Eastern Pacific Sub-Antarctic Differ By Source Region, Neil J. Wyatt, Antony Birchill, Simon Ussher, Angela Milne, Heather A. Bouman, Elizabeth Shoenfelt Troein, Katsiaryna Pabortsava, Alan Wright, Oliver Flanagan, Thomas S. Bibby, Adrian Martin, Cm Moore

School of Geography, Earth and Environmental Sciences

The seasonal availability of light and micronutrients strongly regulates productivity in the Southern Ocean, restricting biological utilization of macronutrients and CO2 drawdown. Mineral dust flux is a key conduit for micronutrients to the Southern Ocean and a critical mediator of multimillennial-scale atmospheric CO2 oscillations. While the role of dust-borne iron (Fe) in Southern Ocean biogeochemistry has been examined in detail, manganese (Mn) availability is also emerging as a potential driver of past, present, and future Southern Ocean biogeochemistry. Here, we present results from fifteen bioassay experiments along a north–south transect in the undersampled eastern Pacific sub-Antarctic zone. In addition to …

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Temperature-Pressure Phase Diagram Of Confined Monolayer Water/Ice At First-Principles Accuracy With A Machine-Learning Force Field, Bo Lin, Jian Jiang, Xiao Cheng Zeng, Lei Li Jul 2023

Temperature-Pressure Phase Diagram Of Confined Monolayer Water/Ice At First-Principles Accuracy With A Machine-Learning Force Field, Bo Lin, Jian Jiang, Xiao Cheng Zeng, Lei Li

Department of Chemistry: Faculty Publications

Understanding the phase behaviour of nanoconfined water films is of fundamental importance in broad fields of science and engineering. However, the phase behaviour of the thinnest water film – monolayer water – is still incompletely known. Here, we developed a machine-learning force field (MLFF) at first-principles accuracy to determine the phase diagram of monolayer water/ice in nanoconfinement with hydrophobic walls. We observed the spontaneous formation of two previously unreported high-density ices, namely, zigzag quasi-bilayer ice (ZZ-qBI) and branched-zigzag quasi-bilayer ice (bZZ-qBI). Unlike conventional bilayer ices, few inter-layer hydrogen bonds were observed in both quasi-bilayer ices. Notably, the bZZ-qBI entails a …

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Ecg Recordings As Predictors Of Very Early Autism Likelihood: A Machine Learning Approach, Deepa Tilwani, Jessica Bradshaw, Amit Sheth, Christian O'Reilly Jul 2023

Ecg Recordings As Predictors Of Very Early Autism Likelihood: A Machine Learning Approach, Deepa Tilwani, Jessica Bradshaw, Amit Sheth, Christian O'Reilly

Publications

In recent years, there has been a rise in the prevalence of autism spectrum disorder (ASD). The diagnosis of ASD requires behavioral observation and standardized testing completed by highly trained experts. Early intervention for ASD can begin as early as 1–2 years of age, but ASD diagnoses are not typically made until ages 2–5 years, thus delaying the start of intervention. There is an urgent need for non-invasive biomarkers to detect ASD in infancy. While previous research using physiological recordings has focused on brain-based biomarkers of ASD, this study investigated the potential of electrocardiogram (ECG) recordings as an ASD biomarker …

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Multiple Ways To Implement And Infer Sentience, Nicolas Rouleau, Michael Levin Jul 2023

Multiple Ways To Implement And Infer Sentience, Nicolas Rouleau, Michael Levin

Animal Sentience

Segundo-Ortin & Calvo’s (S&C’s) thorough review of “plant neurobiology” presents evidence supporting the possibility of plant sentience. They make a compelling case that plants anticipate, assess risk, cooperate, mimic, and pursue goals, as do their animal counterparts. S&C point out that there is a double standard: behavioural patterns associated with subjective experiences in humans are considered valid for inferring cognition in non-human animals but not in diverse other systems including plants. We argue that cognitive functions, including sentience, can potentially be achieved by very different systems and their disparate substrates. We offer some context from the basal cognition literature and …

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Proteoglycan 4 (Prg4)/Lubricin And The Extracellular Matrix In Gout, Khaled A. Elsaid, Gregory D. Jay, Ru Liu-Bryan, Robert Terkeltaub Jul 2023

Proteoglycan 4 (Prg4)/Lubricin And The Extracellular Matrix In Gout, Khaled A. Elsaid, Gregory D. Jay, Ru Liu-Bryan, Robert Terkeltaub

Pharmacy Faculty Articles and Research

Proteoglycan 4 (PRG4) is a mucinous glycoprotein secreted by synovial fibroblasts and superficial zone chondrocytes, released into synovial fluid, and adsorbed on cartilage and synovial surfaces. PRG4′s roles include cartilage boundary lubrication, synovial homeostasis, immunomodulation, and suppression of inflammation. Gouty arthritis is mediated by monosodium urate (MSU) crystal phagocytosis by synovial macrophages, with NLRP3 inflammasome activation and IL-1β release. The phagocytic receptor CD44 mediates MSU crystal uptake by macrophages. By binding CD44, PRG4 limits MSU crystal uptake and downstream inflammation. PRG4/CD44 signaling is transduced by protein phosphatase 2A, which inhibits NF-κB, decreases xanthine oxidoreductase (XOR), urate production, and ROS-mediated IL-1β …

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Industry 4.0 And Circular Economy: Opportunities Of Mena Countries On The Path To The Sustainable Development, Suzanna Elmassah Jul 2023

Industry 4.0 And Circular Economy: Opportunities Of Mena Countries On The Path To The Sustainable Development, Suzanna Elmassah

All Works

No abstract provided.

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Author Correction: Drugnomeai Is An Ensemble Machine-Learning Framework For Predicting Druggability Of Candidate Drug Targets, Arwa Raies, Ewa Tulodziecka, James Stainer, Lawrence Middleton, Ryan S Dhindsa, Pamela Hill, Ola Engkvist, Andrew R Harper, Slavé Petrovski, Dimitrios Vitsios Jul 2023

Author Correction: Drugnomeai Is An Ensemble Machine-Learning Framework For Predicting Druggability Of Candidate Drug Targets, Arwa Raies, Ewa Tulodziecka, James Stainer, Lawrence Middleton, Ryan S Dhindsa, Pamela Hill, Ola Engkvist, Andrew R Harper, Slavé Petrovski, Dimitrios Vitsios

Faculty, Staff and Students Publications

No abstract provided.

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Lessons Learned Creating Microbiology Laboratory Demonstration Videos, Marnie Imhoff, Linsey Donner Jul 2023

Lessons Learned Creating Microbiology Laboratory Demonstration Videos, Marnie Imhoff, Linsey Donner

Innovations in Health Sciences Education Journal

Microbiology laboratory classes are designed to allow students to apply knowledge gained during lectures and become proficient in laboratory skills. Students are introduced to procedures for working with and identifying microorganisms. Instructors must prepare students to perform and interpret the necessary testing procedures to be successful. Laboratory demonstration videos provide students with a first-person, unobstructed demonstration on how to perform laboratory techniques. The videos can be used as a visual learning tool to supplement courses with an in-person laboratory session or as a component in online learning. This article describes the creation of instructional microbiology laboratory demonstration videos.

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Two New Species Of The Remarkable Scorpion Genus Megacormus Karsch, 1881 (Scorpiones: Euscorpiidae), Rolando Teruel, František Kovařík, Graeme Lowe, František Šťáhlavský Jul 2023

Two New Species Of The Remarkable Scorpion Genus Megacormus Karsch, 1881 (Scorpiones: Euscorpiidae), Rolando Teruel, František Kovařík, Graeme Lowe, František Šťáhlavský

Euscorpius

Two new species of the very interesting euscorpiid scorpion genus Megacormus Karsch, 1881, are herein described from eastern Mexico. Both had been previously misidentified in the published literature, one as Megacormus segmentatus Pocock, 1900, the other as Megacormus granosus (Gervais, 1844), but the direct comparison of adults of both sexes to adult topotypes from all members of the genus currently accepted as valid taxa, revealed solid morphological characters that warrant their recognition as distinct taxa. Both new species seem also to be endemics with a small distribution area, but apparently not restricted to a single locality. This addition raises the …

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Causality, Agency, And Moral Responsibility In Nikaya Buddhism, Soo Lam Wong Jul 2023

Causality, Agency, And Moral Responsibility In Nikaya Buddhism, Soo Lam Wong

Comparative Philosophy

In this paper, I aim to examine the relationship between the Buddhist notions of causality and agency, the questions of whether the Buddhist notion of causality affirms causal determinism and whether the Buddhist notion of agency affirms libertarian free will, the implications of the Buddhist notions of causality and agency for moral responsibility, and the implications of the Buddhist rejection of the metaphysical self for agency and moral responsibility. My claim is that although the question of whether the early Buddhist notions of causality and agency affirm causal determinism and libertarian free will respectively remains open, they are compatible with …

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Daoist Freedom, Psychological Hygiene, And Social Criticism, Yun Tang Jul 2023

Daoist Freedom, Psychological Hygiene, And Social Criticism, Yun Tang

Comparative Philosophy

The article explores the inner logic and defining features of Daoist freedom. It argues that Daoist freedom can be meaningfully understood as psychological hygiene, and it suggests that Daoist xuan-jie (懸解) can be rendered possible only if one can rid oneself of intensional suffering—an idea ultimately inspired by Friedrich Nietzsche. This comparative approach enables the article contribute to the received way of understanding Daoist freedom by stressing its dialectics: by being at ease with one’s social and political environment, Daoist freedom demands social criticism, calling for room for people to be able to act spontaneously so that …

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The Dangers Of Re-Colonization: Possible Boundaries Between Latin American Philosophy And Indigenous Philosophy From Latin America, Jorge Sanchez-Perez Jul 2023

The Dangers Of Re-Colonization: Possible Boundaries Between Latin American Philosophy And Indigenous Philosophy From Latin America, Jorge Sanchez-Perez

Comparative Philosophy

The field of Latin American philosophy has established itself as a relevant subfield of philosophical inquiry. However, there might be good reasons to consider that our focus on the subfield could have distracted us from considering another subfield that, although it might share some geographical proximity, does not share the same historical basic elements. In this paper, I argue for a possible and meaningful conceptual difference between Latin American Philosophy and Indigenous philosophy produced in Latin America. First, I raise what I call Mariátegui’s Solidarity Challenge to show that there might be some neglectful treatment of the philosophical views of …

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Analyzing Nietzsche And Darwin In Search Of Origin Of Morality: The Evolving Perspective, Anirban Ghosh, Malabika Chakrabarti Jul 2023

Analyzing Nietzsche And Darwin In Search Of Origin Of Morality: The Evolving Perspective, Anirban Ghosh, Malabika Chakrabarti

Comparative Philosophy

It is generally believed that the greatest asset of human being is the moral values and according to theist such values have been infused in human by the creator. By accepting such view we simply get rid of any effort of searching the origin of morality or ethics and also transfer the responsibility of being ethical on the almighty. But when atheist denied God, the liability of being moral comes to human and also the significant question arose why we should be moral. Probably more important is the hunt for the origin of our morality. In this article we have …

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