Digital Commons Network^™

Recurring Bleaching Events Disrupt The Spatial Properties Of Coral Reef Benthic Communities Across Scales, Helen V. Ford, Jamison M. Gove, John R. Healey, Andrew J. Davies, Nicholas A.J. Graham, Gareth J. Williams

Graduate School of Oceanography Faculty Publications

Marine heatwaves are causing recurring coral bleaching events on tropical reefs that are driving ecosystem change. Yet, little is known about how bleaching and subsequent coral mortality impacts the spatial properties of tropical seascapes, such as patterns of organism spatial clustering and heterogeneity across scales. Changes in these spatial properties can offer insight into ecosystem recovery potential following disturbance. Here we repeatedly quantified coral reef benthic spatial properties around the circumference of an uninhabited tropical island in the central Pacific over a 9-year period that included a minor and subsequent severe marine heatwave. Benthic communities showed increased biotic homogenisation following …

Variation In Carapace Damage Within And Among Loggerhead Musk Turtle (Sternotherus Minor) Populations In Florida Spring-Fed Ecosystems, Joseph J. Pignatelli Iii, Katrina Campbell, Brian P. Butterfield, Gerald R. Johnston, Joseph C. Mitchell, Grover J. Brown, J. Brian Hauge, Andrew D. Walde, Eric C. Munscher

Research, Publications & Creative Work

Damage to a turtle’s shell can provide evidence of past events such as vehicle collisions, disease, predator encounters, or even a behavioural interaction between members of the same species. Documenting shell damage as part of long-term mark and recapture studies enables researchers to determine population trends, intraspecific interactions and identify potential issues within turtle populations. This paper analyses shell damage in populations of the Loggerhead Musk Turtle (Sternotherus minor) (Agassiz, 1857). We examined carapace shell damage frequency and severity in 2701 individual S. minor (1468 males and 1233 females) captured in spring-fed habitats in one state preserve and five state …

ความชุกและพฤติกรรมการใช้สารเสพติดของทหารเกณฑ์ สังกัดค่ายทหาร จังหวัดราชบุรี, จิราวรรณ นิ่มแพร

Chulalongkorn University Theses and Dissertations (Chula ETD)

การวิจัยครั้งนี้เป็นการวิจัยเชิงพรรณนา โดยมีวัตถุประสงค์เพื่อศึกษาความชุก พฤติกรรม ทัศนคติ รวมถึงปัจจัยที่เกี่ยวข้องกับการใช้สารเสพติดของทหารเกณฑ์ ได้ทำการศึกษาในทหารเกณฑ์ สังกัดค่ายทหาร จังหวัดราชบุรี ช่วงเดือนกรกฎาคม - กันยายน ปี 2566 จำนวน 400 คน เครื่องมือที่ใช้ในการวิจัยประกอบด้วย แบบสอบถามข้อมูลทั่วไป แบบสอบถามทัศนคติต่อการใช้สารเสพติด แบบคัดกรองประสบการณ์ในการใช้ยาสูบ สุรา และสารเสพติดตัวอื่นๆ แบบสอบถามความผิดปกติของการใช้สารเสพติด และการตรวจปัสสาวะ สถิติที่ใช้ในการวิเคราะห์ คือ สถิติเชิงพรรณนา และสถิติเชิงอนุมาน ผลการศึกษาพบความชุกการใช้สารอย่างน้อยหนึ่งชนิดตลอดช่วงชีวิตและช่วง 3 เดือนที่ผ่านมา คิดเป็นร้อยละ 86.7 และ 71.5 ตามลำดับ สารที่มีการใช้มากที่สุด 5 อันดับแรก คือ เครื่องดื่มแอลกอฮอล์ ผลิตภัณฑ์ยาสูบ ใบกระท่อม กัญชา และสารผสมน้ำต้มใบกระท่อม พบผู้ที่ใช้ผลิตภัณฑ์ยาสูบ (82.68%) กัญชา (50.00%) มีความเสี่ยงระดับปานกลาง ในกลุ่มผู้ใช้สารแต่ละชนิด พบความผิดปกติจากการใช้สาร 76.76%, 37.38%, 37.37%, 34.14%, 27.27, 26.67% ในกลุ่มผู้ใช้ผลิตภัณฑ์ยาสูบ, เครื่องดื่มแอลกอฮอล์, กัญชา, ใบกระท่อม สารผสมน้ำต้มใบกระท่อมและกลุ่มแอมเฟตามีน ตามลำดับ กลุ่มตัวอย่างส่วนใหญ่มีทัศนคติเชิงลบต่อการใช้สารเสพติด การมีระดับการศึกษาที่ต่ำและมีรายได้เพียงพอเป็นปัจจัยที่มีความสัมพันธ์และเป็นปัจจัยทำนายการใช้สารเสพติดของทหารเกณฑ์ สังกัดค่ายทหาร จังหวัดราชบุรี (P

Identifying Habitat Suitability And Connectivity For Roosevelt Elk (Cervus Canadensis Roosevelti) On The North Coast Of California, Ashley Ann Harper

Cal Poly Humboldt theses and projects

As human development continues to expand, wildlife managers are faced with problems arising from human-wildlife conflict. To address conflict, it is vital to identify how animals view the landscape and move across areas of differing land use. On the North Coast of California, Roosevelt elk (Cervus canadensis roosevelti) are widely considered to be a valuable resource but are viewed by some as a nuisance due to economic losses caused by property damage. The aim of this study was to identify suitable habitat and movement corridors for Roosevelt elk across Humboldt and Del Norte counties in northern California. Suitable …

Examining The Effects Of Seed Mix Diversity And Composition, Biochar Application, Seeding Rate, Species Identity, And Topography On Palouse Prairie Restoration, Thurman Johnson

EWU Masters Thesis Collection

With over 99.9% of the Palouse prairie lost to land conversion, restoring native plant communities is crucial for ecological function, however, research on Palouse prairie restoration methods is sparse. Seed-based restoration uses a mix of seeded species to enhance competition against weeds, diversify vegetation, and adapt to environmental conditions. However, many factors can be varied, such as seed mix diversity and composition, the proportion of forbs to grasses, and seeding rate, and the most effective levels of each are not clear. Further, soil amendments, such as biochar, may benefit properties of tilled soils, but have not explored in Palouse Prairie …

Carnivore And Ungulate Occurrence In A Fire-Prone Region, Sara J. Moriarty-Graves

Cal Poly Humboldt theses and projects

Increasing fire size and severity in the western United States causes changes to ecosystems, species’ habitat use, and interspecific interactions. Wide-ranging carnivore and ungulate mammalian species and their interactions may be influenced by an increase in fire activity in northern California. Depending on the fire characteristics, ungulates may benefit from burned habitat due to an increase in forage availability, while carnivore species may be differentially impacted, but ultimately driven by bottom-up processes from a shift in prey availability. I used a three-step approach to estimate the single-species occupancy of four large mammal species: mountain lion (Puma concolor), coyote …

Effects Of Agricultural Chemicals On Native Plants Of The Northern Great Plains, Gabrielle Bolwerk

Electronic Theses and Dissertations

Agricultural chemicals are ubiquitous on the Northern Great Plains landscape and have negative impacts on non-target plant communities, even at small doses. Northern Great Plains grassland plant communities may experience herbicide drift from agricultural fields or be subject to livestock pharmaceuticals in grazing lands. My research objective was to evaluate if and how native plants are affected by agricultural chemical presence at different concentrations. In Chapter 2, I studied the effect of different concentrations of three common agricultural herbicides (2,4-D, atrazine, and trifluralin) on the germination, emergence, and growth of native plant species of the Northern Great Plains. I performed …

Connecting Antibiotic Resistance To The Environment (Care): Introducing A Novel Framework Integrating Chemical Cross-Resistance And Place-Based Engagement To The Blue Marsh Watershed In Reading, Pennsylvania, Jill Felker

Antioch University Dissertations & Theses

Antibiotic resistance is a serious health threat around the world. Millions of individuals are infected with antibiotic-resistant bacteria yearly, and thousands die from previously curable illnesses. Although antibiotic resistance occurs naturally, misuse of antibiotics accelerates the loss of their effectiveness. Public health campaigns focusing on antibiotic awareness have not effectively communicated and educated the public on this health crisis. New efforts to combat antibiotic resistance are urgently needed. This dissertation focuses on the ecological and public health components of antibiotic resistance research that must be addressed to decelerate antibiotic resistance. A new interdisciplinary theoretical framework was developed to Connect Antibiotic …

Muscovy Duck (Cairina Moschata), M. J. Robinson, S. K. Robinson, Ann Hodgson, Florida Ornithological Society

Family 01: Anatidae

Of the roughly 100 bird species introduced to Florida over the years, 14 are considered established species, including the Muscovy Duck. The native range of this large, bulky duck species includes Central and South America, Mexico, and the southernmost regions of Texas.

Using Extended Two-Step Floating Catchment Area To Map Children’S Level Of Access To Physical Books In West Virginia, Heather A. Maxey

Graduate Theses, Dissertations, and Problem Reports (ETD)

The state of West Virginia lacked a comprehensive, in-depth analysis of the availability of physical books across the state. Access to reading material is vital to a child’s educational development as well as lifelong learning beyond childhood. To guide policy decisions and planning for outreach which addresses reading levels and beyond, I mapped levels of access stemming from socioeconomic barriers, spatial barriers, and an integrated index of both types of barriers. To map spatial access, I utilized a modified Extended Two-Step Floating Catchment Area model, deriving techniques from Hong et al’s 2023 article addressing access for health care in WV. …

Driving After Marijuana Use Among Us College Students During The Covid-19 Pandemic, Yuni Tang

Graduate Theses, Dissertations, and Problem Reports (ETD)

Introduction: Adolescents and college-aged adults account for a large proportion of the United States population and are susceptible to drugs, including marijuana. Since the late 1960s in the United States, numerous states have legalized marijuana for medical and recreational purposes. These recent policy changes may alter people’s attitudes and behaviors about marijuana use, particularly young adults. The expansion of state-level marijuana legalization may also increase accessibility in younger populations and increase reckless driving behavior associated with marijuana use, including driving after marijuana use. During the COVID-19 pandemic, adolescents and young adults experienced heightened stress and anxiety, which have significantly contributed …

Application Of Computational Biophysics Techniques To Characterize Cell Membrane-Associated Events, Kyle Billings

Graduate Theses, Dissertations, and Problem Reports (ETD)

Cell membranes are crowded environments which can modulate protein structure-function relationships through interaction with lipids, other proteins, carbohydrate structures and so on. This work focuses the impact of the membrane environment on two varieties of peptides: Microbial rhodopsin proteins, and cyclic peptides.

Life on Earth is dependent on the ability of plants and microbes to harness sunlight for energy production. Their ability to transform light into carbohydrates requires tailor-made machinery, and for a wealth of microorganisms, microbial rhodopsin proteins (MR) are critical for maintaining the concentration gradients used to produce the energy molecule Adenosine triphosphate (ATP). The central retinal molecule …

Using Machine Learning Classification And Esa Sentinel 2 Multispectral Imager Data To Delineate Marsh Vegetation And Measure Ecotone Movement In Coastal Georgia, Thomas A. Pudil

College of Graduate Studies: Theses & Dissertations

Tidal marshes are unique communities that are subjected to environmental stressors including sea level rise, salinity change, and drought, resulting in constant change. It is important to monitor these changing areas because of the ecosystem services they provide to us, such as protection from storms and carbon sequestration. The proposed work for this thesis project is focused on the study of tidal marshes and the dynamics between the vegetation species within them. The aim of this project is to use geospatial technology and analyses, along with machine learning classification methods, to monitor change in these valuable ecosystems. The Georgia coast …

Social Vulnerability And The Prevalence Of Opioid Use Disorder Among Older Medicare Beneficiaries In U.S. Counties, Tse-Chuan Yang, Seulki Kim, Stephen A. Matthews, Carla Shoff

Department of Sociology: Faculty Publications

Objectives: Recent research has investigated the factors associated with the prevalence of opioid use disorder (OUD) among older adults (65+), which has rapidly increased in the past decade. However, little is known about the relationship between social vulnerability and the prevalence of OUD, and even less about whether the correlates of the prevalence of OUD vary across the social vulnerability spectrum. This study aims to fill these gaps. Methods: We assemble a county-level data set in the contiguous United States (U.S.) by merging 2021 Medicare claims with the CDC’s social vulnerability index and other covariates. Using the total number of …

Exploratory Analyses Of American Lobster Habitat Preferences And Catchability In Ventless Trap Surveys, Annabelle Leahy

Open Access Master's Theses

Numerous factors must be considered in efforts to rebuild sustainable stock levels of the Southern New England (SNE) lobster stock including changing uses of marine space, such as the growth of the offshore wind industry, and stressors such as rising ocean temperatures. These factors may change the species’ habitat use and could further impact the ability of the region to support a healthy lobster population. This work uses data from pre-wind farm construction ventless trap surveys to further characterize the suitable habitat of the SNE lobster stock and to examine the effects of survey design, namely trap position and trap …

An Ecological Study Of The Spatiotemporal Dynamics And Drivers Of Domestically Acquired Campylobacteriosis In Ireland, 2011–2018, Martin Boudou, Coilín Ó Haiseadha, Patricia Garvey, Jean O'Dwyer, Paul Hynds

Articles

In 2021, Campylobacteriosis was the main gastrointestinal disease in the European Union since 2007 according to the European Centre for Disease Prevention and Control. In the Republic of Ireland, the incidence of the disease is particularly high with approximately 3,000 cases per annum, raising significant concerns for national health authorities with an expected increase in the number of cases in the light of climate change. The current study sought to assess the spatio-temporal patterns of campylobacteriosis in the Republic of Ireland using 20,391 cases from January 2011 to December 2018. An ensemble of spatial statistics techniques including seasonal decomposition, spatial …

The Environmental Cellular Stress Response: The Intertidal As A Multistressor Model, Michael Collins, Melody S. Clark, Manuela Truebano

School of Biological and Marine Sciences

The wild poses a multifaceted challenge to the maintenance of cellular function. Therefore, a multistressor approach is essential to predict the cellular mechanisms which promote homeostasis and underpin whole-organism tolerance. The intertidal zone is particularly dynamic, and thus, its inhabitants provide excellent models to assess mechanisms underpinning multistressor tolerance. Here, we critically review our current understanding of the regulation of the cellular stress response (CSR) under multiple abiotic stressors in intertidal organisms and consider to what extent a multistressor approach brings us closer to understanding responses in the wild. The function of the CSR has been well documented in laboratory …

Externalizing Traits: Shared Causalities For Covid-19 And Alzheimer's Dementia Using Mendelian Randomization Analysis, Haotian Wang, Mingyang Cao, Yingjun Xi, Weijie Cao, Xiaoyu Zhang, Xiaoni Meng, Deqiang Zheng, Lijuan Wu, Wei Wang, Di Liu, Youxin Wang

Research outputs 2022 to 2026

Externalizing traits have been related with the outcomes of coronavirus disease 2019 (COVID-19) and Alzheimer's dementia (AD); however, whether these associations are causal remains unknown. We used the two-sample Mendelian randomization (MR) approach with more than 200 single-nucleotide polymorphisms (SNPs) for externalizing traits to explore the causal associations of externalizing traits with the risk of COVID-19 (infected COVID-19, hospitalized COVID-19, and severe COVID-19) or AD based on the summary data. The inverse variance–weighted method (IVW) was used to estimate the main effect, followed by several sensitivity analyses. IVW analysis showed significant associations of externalizing traits with COVID-19 infection (odds ratio …

Abmr: An R Package For Agent-Based Model Analysis Of Large-Scale Movements Across Taxa, Benjamin Gochanour, Javier Fernández-López, Andrea Contina

School of Integrative Biological & Chemical Sciences Faculty Publications

1. Agent-based modelling (ABM) shows promise for animal movement studies. However, a robust, open-source and spatially explicit ABM coding platform is currently lacking.
2. We present abmR, an R package for conducting continental-scale ABM simulations across animal taxa. The package features two movement functions, each of which relies on the Ornstein–Uhlenbeck (OU) process.
3. The theoretical background for abmR is discussed and the main functionalities are illustrated using example populations.
4. Potential future additions to this open-source package may include the ability to specify multiple environmental variables or to model interactions between agents. Additionally, updates may offer opportunities for disease ecology and integration with …

Trophic Ecology And Mercury Concentrations Of Canary Rockfish (Sebastes Pinniger) In The California Current System, Michaela M. Melanson

Master's Theses

Canary rockfish are a profitable fishery resource that has failed and successfully recovered in the 21st century. This study aimed to evaluate their trophic ecology through stomach content and stable isotope analysis and relate these to their mercury concentrations, biological traits, and environmental conditions. Canary rockfish consume mostly krill and teleosts with their geographic location affecting the proportion of prey items, suggesting regional environmental effects: chlorophyll-a, relief, port, and depth impact dietary choices. Mean ??13C values (-17.18 ± 0.54) significantly increased in individuals residing in deeper depths, higher latitudes, higher productivity, and higher temperatures, and in sexually mature individuals. Mean …

Neighborhood Market Potentials For Alcohol Use And Rates Of Child Abuse And Neglect, Bridget Freisthler, Christiana Kranich, Jennifer Price Wolf, Reiko Boyd, Paul J. Gruenewald

Faculty Research, Scholarly, and Creative Activity

Background: Alcohol use can lead to child abuse and neglect even if the person using alcohol does not use heavily. Yet relatively few measures that reflect alcohol use are available at smaller geographic units. We assess whether the estimated level of total alcohol use per capita is related to measures of child abuse and neglect that include substantiated reports of maltreatment, total entries into foster care, and alcohol-related entries into foster care. Methods: Our sample consists of 326 Census block groups in Sacramento, California over three time points (978 space–time units). Administrative data for substantiations of child abuse and neglect …

Community Ecology And Disease Dynamics In Pacific Oysters: Unraveling Microbiome-Pathogen Interactions In The Wild, Victoria E. Cifelli

Cal Poly Humboldt theses and projects

In the context of multispecies microbial assemblages, disruptions can occur when there are alterations in host conditions, such as the onset of a disease. Notably, viruses have the potential to reshape a host's microbial community. However, the role of the host's habitat and environment, which could be pivotal in communities with shifting niche space and habitat filters, is often overlooked in host-microbe-pathogen interactions. Recognizing the importance of these factors, I employed a field-based approach to understand microbial community dynamics in the presence of disease. To address the influence of geographical location, I conducted an analysis involving healthy and infected oysters …

Factors Associated With Nonsyndromic Anotia And Microtia, Texas, 1999–2014, Jeremy M Schraw, J P Woodhouse, Renata H Benjamin, Charles J Shumate, Joanne Nguyen, Mark A Canfield, A J Agopian, Philip J Lupo

Faculty, Staff and Students Publications

BACKGROUND: Few risk factors have been identified for nonsyndromic anotia/microtia (A/M).

METHODS: We obtained data on cases and a reference population of all livebirths in Texas for 1999-2014 from the Texas Birth Defects Registry (TBDR) and Texas vital records. We estimated prevalence ratios (PRs) and 95% confidence intervals (CIs) for A/M (any, isolated, nonisolated, unilateral, and bilateral) using Poisson regression. We evaluated trends in prevalence rates using Joinpoint regression.

RESULTS: We identified 1,322 cases, of whom 982 (74.3%) had isolated and 1,175 (88.9%) had unilateral A/M. Prevalence was increased among males (PR: 1.3, 95% CI: 1.2-1.4), offspring of women with …

Restoring Human And More-Than-Human Relations In Toxic Riskscapes: “In Perpetuity” Within Lake Superior’S Keweenaw Bay Indian Community, Sand Point, Valoree Gagnon, Evelyn H. Ravindran

Michigan Tech Publications, Part 1

Lake Superior’s Keweenaw Bay is the ancestral and contemporary homeland of the Anishinaabe Ojibwa and their relatives. It is also a toxic riskscape: Its waters, shorelines, and fish beings are polluted by an unknown tonnage of legacy mining waste rock called “stamp sands,” which contain unsafe levels of toxic compounds. This paper describes Ojibwa stewardship principles and reciprocal obligations, illustrating First Treaty With Gichi-Manitou practices of restoring relations within a toxic riskscape. Defined here, riskscapes are places and spaces where pollution/toxicity relations are continually reconfigured in literal, symbolic, and systemic ways. We share a story from Keweenaw Bay’s Sand Point …