Digital Commons Network^™

Planttracker: An R Package To Translate Maps Of Plant Occurrence Into Demographic Data, Alice E. Stears, Peter B. Adler, Shannon E. Albeke, David H. Atkins, Jared Studyvin, Daniel C. Laughlin

Wildland Resources Faculty Publications

1. Long-term demographic data are rare yet invaluable for conservation, management, and basic research on the underlying mechanisms of population and community dynamics. Historical and contemporary mapped datasets of plant location and basal area present a relatively untapped source of demographic records that, in some cases, span over 20 years of sequential data collection. However, these maps do not uniquely mark individual plants, making the process of collecting growth, survival, and recruitment data difficult.
2. Recent efforts to translate historical maps of plant occurrence into shapefiles make it possible to use computer algorithms to track individuals through time and determine individual growth …

Agrichemicals (Nitrate And Atrazine) In Drinking Water And Adverse Health Outcomes In Children In Nebraska, Balkissa S. Ouattara

Theses & Dissertations

Objectives: This research was conducted to (1) determine the concentrations of atrazine, and nitrate, in Nebraska watersheds and counties; (2) calculate the incidence of pediatric cancers and prevalence of birth defects in Nebraska counties and watersheds, respectively; (3) assess the relationship between the contaminant levels and the incidence rate of pediatric cancers and birth defects prevalence.

Methods: Pediatric cancers and birth defects data were obtained from the Nebraska Department of Health and Human Services. Water quality data were collected and retrieved from the Water Quality Portal and the Nebraska Groundwater Quality Clearinghouse. Geospatial and statistical analyses were conducted at the …

Maternal Proximity To Mountain-Top Removal Mining And Birth Defects In Appalachian Kentucky, 1997–2003, Daniel B. Cooper, Courtney J. Walker, W. Jay Christian

Epidemiology and Environmental Health Faculty Publications

Extraction of coal through mountaintop removal mining (MTR) alters many dimensions of the landscape. Explosive blasts, exposed rock, and coal washing have the potential to pollute air and water. Previous research suggests that infants born to mothers living in areas with MTR have a higher prevalence of birth defects. In this cross-sectional study, we further examine the relationship between MTR activity and several types of birth defects. Maternal exposure to MTR was assessed using remote sensing data from Skytruth, which captures MTR activity in the Central Appalachian region of the United States. Active MTR area was quantified within a five-kilometer …

Environmental Metagenomic Assessment And Its Usefulness In The Present Pandemic, Pathum Sookaromdee, Viroj Wiwanitkit

Journal of Medicine in Scientific Research

No abstract provided.

Discourse(S) Of Identity: Precarity And (In)Visibility In Farida Karodia’S Daughters Of The Twilight, Goutam Karmakar, Rajendra Chetty

Journal of International Women's Studies

Apartheid South Africa witnessed the forming of cultural and sexual identities within political strategies that were designed to categorize and regulate “non-white” individuals. By dealing with interactions between white men and black women, South African literary works in the penultimate years of apartheid demonstrate apartheid’s structural viciousness and gendered hierarchy through certain innovative deviations. Daughters of the Twilight (1986) by Farida Karodia is one such text that not only sheds light on the masculine, racialized, and patriarchal apartheid structure of the male gaze, but also inherently disallows the female characters of Karodia’s narrative to inhabit neither day nor night, as …

Hiv Epidemic Among Brazilian Women Who Have Sex With Women: An Ecological Study, Ana Luisa Lemos Bezerra, William Sorensen, Taymara Barbosa Rodrigues, Sara Melissa Lago Sousa, Marcia Simao Carneiro, Sandra Helena Isse Polaro, Aline Maria Pereira Cruz Ramos, Glenda Roberta Oliveira Naiff Ferreira, Elucir Gir, Renata Karina Reis, Elia Pinheiro Botelho

Health & Kinesiology Faculty Publications and Presentations

The influences of public policies fighting HIV among women who have sex with women is scarcely studied. This study aimed to analyse the time series of human immunodeficiency virus (HIV) epidemic, between 2007 and 2020, among Brazilian women who have sex with women, in order to evaluate the eect of Brazilian policies for fighting HIV in this subpopulation compared to women who have sex with men (WSM). This ecological study employed HIV and acquired immunodeficiency syndrome (AIDS) new cases among women who have sex strictly with women (WSW), women who have sex with men and women (WSMW), and WSM reported …

Rock Climbing And Conservation In Land Management: Can They Coexist?, Marissa Heller

Geography ETDs

As participation in outdoor recreation is growing in the U.S., a dilemma is presented for conservation planners and land area managers who must manage the increasing demand for recreation while simultaneously working to protect species. Rock climbers and other outdoor recreationalists have asserted that a relationship exists between recreation and the conservation of public lands. However, mounting evidence suggests that rock climbing continues to cause a multitude of negative impacts to ecosystems. Here, I investigate the extent to which land management practices allow for rock climbing and conservation to coexist, and how it is that well developed plans protect ecologically …

Ecological Differences In The Associations Between Air Pollution, Greenness, And Risk Of Stroke: The Regards Study., Daniel W. Riggs

Electronic Theses and Dissertations

The adverse health effects of air pollution have long been recognized, with the majority of morbidity and mortality due to its effects on the cardiovascular system. Alternatively, living in areas with higher greenness has been found to be beneficial to a wide range of health outcomes. However, few studies have considered that these relationships may vary depending on the surrounding ecosystem. The purpose of this dissertation was to examine the effects of long-term exposure to air pollution and greenness on incidence of stroke, and how these relationships vary with the major ecological regions of the United States. We utilized the …

Understanding Deaths Of Despair In Us Counties Through Bourdieu's Theory Of Capital, Seulki Kim

Legacy Theses & Dissertations (2009 - 2024)

The overarching goal of this dissertation is to examine a recent rise in rates of deaths from suicide, alcohol, and drugs, labeled together as “deaths of despair” in the United States using Bourdieu’s theory of capital. Although the deaths of despair phenomenon is a product of a complex process related to various material and non-material factors, there is no theoretical framework that is able to account for different domains of predictors. Thus, this dissertation aims to fill this gap by drawing on Bourdieu’s theory of capital and systematically investigating the relationships of mortality rates attributed to suicide, alcohol, and opioid …

Competing Behaviors Of Thermoregulation And Ambush Foraging In The Timber Rattlesnake (Crotalus Horridus Horridus): A Mechanistic Assessment Of Thermal Conduction, Larry K. Kamees

Graduate Theses and Dissertations

The interaction between the biophysical environment and ectotherm morphology elicits behaviors designed to maintain internal body temperature (Tb) within a range that promotes physiological functions. The short-term requirements of mass (energy requirements) and heat balance are subject to tradeoffs imposed by the organisms current physiological (heat and mass budgets) and environmental (biophysical, demographic, social, and predation) constraints and available resources. In temperate forests, extreme temperatures are common in summer even with intermittent sun exposure due to dense canopy cover. In Spring and Fall, temperatures can range from below freezing to 35 ℃ in 24 hrs. An ambush predator like the …

Investigating The Relationships Between Socioeconomic Status, Kratom Legislation, And The Covid-19 Pandemic On Opioid Overdose Mortality In The United States., Lyndsey Blair

Electronic Theses and Dissertations

Background: 585,000 people have died from an opioid overdose in the US between 1999 and 2020. The current opioid epidemic has been described as a quadruple wave of overdoses, due in part to the changes in prescription and illicit opioid supply as well as the underlying social and structural factors that led to a subsequent increase in demand. In order to mitigate the opioid epidemic through prevention and protection strategies, we must first understand the social and structural factors that are driving the increase in opioid misuse and abuse. To better understand the socioeconomic factors, we described socioeconomic profiles of …

Estimating Giraffe (Giraffa Camelopardalis) Population Size And Survival Rates In South Luangwa Valley, Zambia, Samantha Phillips

All NMU Master's Theses

Giraffe populations across their range have declined significantly over the past 40 years. Recent studies of these declines noted that conservation efforts often lack basic population estimates and descriptions of demographic parameters such as sex- and age-specific survival rates. I addressed those research needs for a geographically-isolated population of giraffes (Giraffa camelopardalis) in South Luangwa Valley, Zambia. During 2016 to 2018, collaborators opportunistically photographed giraffes throughout South Luangwa National Park and adjacent Lupande and Lumimba Game Management Areas. Given that each giraffe has a unique spotting pattern, I created a photo inventory of the population and developed an …

Bird Use Of Avocado Farms And Intact Forest In The Dominican Republic, Avery Young

Masters Theses and Doctoral Dissertations

The Dominican Republic, a conservation priority area due to high rates of bird endemism and overwintering Neotropical migrant habitats, is seeing an increase of avocado farms and a subsequent forest loss. We conducted point-count bird surveys to determine how avian species richness and diversity differ between avocado farms and intact forest, as well as how vegetation differences between farms and forests could impact bird use. We found that vegetation structure varied significantly between farm and forest sites, but that overall bird diversity and migrant diversity did not. However, we found that endemic bird species showed higher species richness and diversity …

Growth And Reproduction In Gulf Of Mexico Black Corals (Antipatharians) In Field And Laboratory Studies, Victoria E. Salinas

Theses and Dissertations

Black corals provide an important ecosystem of marine life and are found throughout all the oceans of the world at depths between 2 and 8,600 m. However, little is understood about their life history and the factors that control the distribution of black corals, particularly in the Gulf of Mexico (GoM). Given the impacts of the Deepwater Horizon oil spill on soft corals (e.g., black corals and octocorals) in the GoM, studies of their growth and reproductive biology in both natural and aquaculture environments are crucial for restoration efforts. The objectives of this study were to examine reproductive processes, compare …

Intestinal Microbiota Analysis Of Broiler Chickens Under Necrotic Enteritis Challenge And Tributyrin Supplementation, Taylor Nicole Mckinney

Graduate Theses and Dissertations

Poultry is a staple protein source for most of the planet. Until recently, antibiotic growth promoters (AGPs) were used to prevent illnesses in commercial chicken production. Currently, this is not possible due to regulations and consumer concern, but without such a preventative, diseases like necrotic enteritis (NE) have reemerged, posing a threat to bird health, and ultimately, our food source. Necrotic enteritis is a severe gastrointestinal disease caused by the gram-positive pathogen, Clostridium perfringens. Clinical features of this disease are diarrhea, intestinal lesions, and death, with a high transmission rate. In a subclinical form, growth performance is diminished and is …

Emergency Department Communication In Persons Living With Dementia And Care Partners: A Scoping Review, Christopher R Carpenter, Jesseca Leggett, Fernanda Bellolio, Marian Betz, Ryan M Carnahan, David Carr, Michelle Doering, Jennie Chin Hansen, Eric D Isaacs, Deborah Jobe, Kathleen Kelly, Nancy Morrow-Howell, Beth Prusaczyk, Bob Savage, Joe Suyama, Allan S Vann, Kristin L Rising, Ula Hwang, Manish N Shah

Faculty, Staff and Student Publications

OBJECTIVES: To synthesize published research exploring emergency department (ED) communication strategies and decision-making with persons living with dementia (PLWD) and their care partners as the basis for a multistakeholder consensus conference to prioritize future research.

DESIGN: Systematic scoping review.

SETTINGS AND PARTICIPANTS: PLWD and their care partners in the ED setting.

METHODS: Informed by 2 Patient-Intervention-Comparison-Outcome (PICO) questions, we conducted systematic electronic searches of medical research databases for relevant publications following standardized methodological guidelines. The results were presented to interdisciplinary stakeholders, including dementia researchers, clinicians, PLWD, care partners, and advocacy organizations. The PICO questions included: How does communication differ for …

Guidelines For Model Adaptation: A Study Of The Transferability Of A General Seagrass Ecosystem Dynamic Bayesian Networks Model, Paula Sobenko Hatum, Kathryn Mcmahon, Kerrie Mengersen, Paul Pao Yen Wu

Research outputs 2022 to 2026

In general, it is not feasible to collect enough empirical data to capture the entire range of processes that define a complex system, either intrinsically or when viewing the system from a different geographical or temporal perspective. In this context, an alternative approach is to consider model transferability, which is the act of translating a model built for one environment to another less well-known situation. Model transferability and adaptability may be extremely beneficial—approaches that aid in the reuse and adaption of models, particularly for sites with limited data, would benefit from widespread model uptake. Besides the reduced effort required to …

Spotted Fever Group Rickettsioses In Central America: The Research And Public Health Disparity Among Socioeconomic Lines, Kyndall C. Dye-Braumuller, Marvin S. Rodriguez Aquino, Stella C.W. Self, Mufaro Kanyangarara, Melissa Nolan Ph.D., Mph

Faculty Publications

Tick-borne diseases including rickettsial diseases are increasing in incidence worldwide. Many rickettsial pathogens can cause disease which is commonly underdiagnosed and underreported; Rickettsia pathogens in the spotted fever group (SFGR) are thus classified as neglected bacterial pathogens. The Central American region shoulders a large proportion of the global neglected disease burden; however, little is known regarding SFGR disease here. Although development varies, four of the seven countries in this region have both the highest poverty rates and SFGR disease burdens (El Salvador, Honduras, Guatemala, and Nicaragua), compared to Belize, Panama, and Costa Rica. Utilizing the Human Development Index (HDI), we …

Determinants Of Delayed Initiation Of Breastfeeding: A Cross-Sectional Multicenter Study In Abu Dhabi, The United Arab Emirates, Zainab Taha, Aysha Ibrahim Al Dhaheri, Ludmilla Wikkeling-Scott, Ahmed Ali Hassan, Dimitrios Papandreou

All Works

One of the best practices to reduce the risk of infant morbidity and mortality is the early initiation of breastfeeding, specifically within the first hour of birth, as the World Health Organization (WHO) recommends. Limited data exist on breastfeeding initiation and its related factors in the United Arab Emirates (U.A.E.). Therefore, the purpose of this research study was to evaluate and analyze the determinant factors associated with delayed initiation of breastfeeding among mothers with children aged <2 years old in a cross-sectional multicenter setting in Abu Dhabi, U.A.E. Seven governmental community and healthcare centers participated in the study from diverse geographic areas of Abu Dhabi. A trained female research assistant collected information from mothers with young children attending the centers. All participants were informed in detail about the purpose of the study and signed a written consent form. A total of 1610 mother-child pairs were included in the study. The mean (standard deviation) of maternal age and children's age was 30.1 (5.1) years and 8.1 (5.9) months, respectively. Six hundred and four (604) (37.5%) reported delayed initiation of breastfeeding. Factors associated with delayed breastfeeding initiation were being of non-Arab nationality (adjusted odds ratio (A.O.R.) 1.30, 95% confidence interval (CI) 1.03, 1.63), caesarean section (AOR 2.85, 95% CI 2.26, 3.58), non-rooming-in (AOR 2.82, 95% CI 1.53, 5.21), first birth order (AOR 1.34, 95% CI 1.07, 1.69), and mothers with low-birth-weight children (AOR 3.30, 95% CI 2.18, 4.99) as was analyzed by multivariate logistic regression analysis. In conclusion, approximately four out of ten mothers delayed initiation of breastfeeding for more than one hour after delivery. The results of this study call for urgent policy changes to improve the early initiation rates of breastfeeding mothers in the U.A.E.

Flexible Drought Deciduousness In A Neotropical Understory Herb, Julia G. Harenčár, Eleinis Ávila-Lovera, Gregory R. Goldsmith, Grace F. Chen, Kathleen M. Kay

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

PREMISE OF THE STUDY

Adaptive divergence across environmental gradients is a key driver of speciation. Precipitation seasonality gradients are common in the tropics, yet drought adaptation is nearly unexplored in neotropical understory herbs. We examine two recently diverged neotropical spiral gingers, one adapted to seasonal drought and one reliant on perennial water, to uncover the basis of drought adaptation.

METHODS

We combine ecophysiological trait measurements in the field and greenhouse with experimental and observational assessment of real-time drought response to determine how Costus villosissimus (Costaceae) differs from C. allenii to achieve drought adaptation.

KEY RESULTS

We find that drought-adapted C. …

Amplification Of Black Vulture (Coragyps Atratus) Dna From Regurgitated Food Pellets, Daniel R. Taylor, Bryan M. Kluever, John S. Humphrey, Iona M. Hennessy, Amber Sutton, William E. Bruce, Antoinette J. Piaggio

United States Department of Agriculture Wildlife Services: Staff Publications

Studies that rely on noninvasive collection of DNA for birds often use feces or feathers. Some birds, such as vultures, regurgitate undigested matter in the form of pellets that are commonly found under roost sites. Our research demonstrates that regurgitated pellets are a viable, noninvasive source of DNA for molecular ecology studies of vultures. Our objectives were to amplify 5 microsatellite loci designed for distinguishing Turkey Vultures (Cathartes aura) and Black Vultures (Coragyps atratus) in a single, multiplexed PCR, and to determine how long the target nuclear DNA persists after a vulture pellet is regurgitated and …

Chemical Toxicants In Water: A Geohealth Perspective In The Context Of Climate Change, Naveen Joseph, Tate Libunao, Elizabeth Herrmann, Shannon L. Bartelt-Hunt, Catherine R. Propper, Jesse E. Bell, Alan S. Kolok

Department of Civil and Environmental Engineering: Faculty Publications

The editorial focuses on four major themes contextualized in a virtual GeoHealth workshop that occurred from June 14 to 16, 2021. Topics in that workshop included drinking water and chronic chemical exposure, environmental injustice, public health and drinking water policy, and the fate, transport, and human impact of aqueous contaminants in the context of climate change. The intent of the workshop was to further define the field of GeoHealth. This workshop emphasized on chemical toxicants that drive human health. The major calls for action emerged from the workshop include enhancing community engagement, advocating for equity and justice, and training …

Population Genetics Of Cownose Rays, Rhinoptera Spp. In The Western Atlantic, Helen Weber

Master's Theses

Using molecular tools (e.g., the NADH subunit II mitochondrial gene), this study was the first to document the Brazilian cownose ray, Rhinoptera brasiliensis, within the northwestern Atlantic (NWA), and was the first study to examine population structure in R. brasiliensis within the NWA or northern Gulf of Mexico (GMX), revealing novel insights into the population biology of the animal and extending its range by nearly 1,500 km. This study also examined the sympatrically occurring American cownose ray, R. bonasus, and found population structure between the NWA and the GMX and the NWA and the southwestern Atlantic (SWA). High …

Using An Affinity Analysis To Identify Phytoplankton Associations, Weiju Zhu, Zhaojian Ding, Yangdong Pan, Quanxi Wang

Environmental Science and Management Faculty Publications and Presentations

Phytoplankton functional traits can represent particular environmental conditions in complex aquatic ecosystems. Categorizing phytoplankton species into functional groups is challenging and time-consuming, and requires high-level expertise in species autecology. In this study, we introduced an affinity analysis to aid the identification of candidate associations of phytoplankton from two data sets comprised of phytoplankton and environmental information. In the Huaihe River Basin with a drainage area of 270,000 km2 in China, samples were collected from 217 selected sites during the low-water period in May 2013; monthly samples were collected during 2006–2011 in a man-made pond, Dishui Lake. Our results indicated that …

Predicting Suicide In Counties: Creating A Quantitative Measure Of Suicide Risk, Kate Mobley, Gita Taasoobshirazi

Faculty Articles

Rising rates of suicide over the past two decades have increased the need for wide-ranging suicide prevention efforts. One approach is to target high-risk groups, which requires the identification of the characteristics of these population sub-groups. This suicidology study was conducted using large-scale, secondary data to answer the question: using the research on suicide, are there variables studied at the community level that are linked to suicide and are measurable using quantitative, demographic data that are already collected and updated? Data on deaths from suicide in U.S. counties for the years 2000, 2005, 2010 and 2015 were analyzed using multiple …

The Adaptation Of Export-Scale Urban Farmers Amid The Covid-19 Pandemic In Bandung Metropolitan, Kinanti Indah Safitri, Oekan Soekotjo Abdoellah, Budhi Gunawan, Parikesit -, Yusep Suparman, Akhmad Zainal Mubarak, Margareth Pardede

The Qualitative Report

These days, urban agriculture is more than a hobby. It has expanded into a local commercial business, even to an export scale. However, urban farmers who have commercialized their products must adapt to the COVID-19 pandemic situation, which has impacted many aspects of global life. This research used a mixed-method approach. We collected quantitative data from 107 respondents on the household commercialization index, income level, and education level of export-scale-urban farmers in the Bandung metropolitan area, West Java, Indonesia. We also used qualitative data to determine how farmers were adapting to difficult situations due to the COVID-19 pandemic. This information …

Screening And Assessment Of Cancer-Related Fatigue: A Clinical Practice Guideline For Health Care Providers, Mary I. Fisher, Joy C. Cohn, Shana Harrington, Jeannette Lee, Daniel Malone

Physical Therapy Faculty Publications

Cancer-related fatigue (CRF) is the most common side effect of cancer treatment. Regular surveillance is recommended, but few clinical practice guidelines transparently assess study bias, quality, and clinical utility in deriving recommendations of screening and assessment methods. The purpose of this clinical practice guideline (CPG) is to provide recommendations for the screening and assessment of CRF for health care professions treating individuals with cancer. Following best practices for development of a CPG using the Appraisal of Guidelines for Research and Evaluation (AGREE) Statement and Emergency Care Research Institute (ECRI) Guidelines Trust Scorecard, this CPG included a systematic search of the …

Social Determinants Of Stroke Hospitalization And Mortality In United States’ Counties, Randhir Sagar Yadav, Durgesh Chaudhary, Venkatesh Avula, Shima Shahjouei, Mahmoud Reza Azarpazhooh, Vida Abedi, Jiang Li, Ramin Zand

Neuroscience Institute Publications

(1) Background: Stroke incidence and outcomes are influenced by socioeconomic status. There is a paucity of reported population-level studies regarding these determinants. The goal of this ecological analysis was to determine the county-level associations of social determinants of stroke hospitalization and death rates in the United States. (2) Methods: Publicly available data as of 9 April 2021, for the socioeconomic factors and outcomes, was extracted from the Centers for Disease Control and Prevention. The outcomes of interest were “all stroke hospitalization rates per 1000 Medicare beneficiaries” (SHR) and “all stroke death rates per 100,000 population” (SDR). We used a multivariate …

Jefferson Digital Commons Quarterly Report: April-June 2022, Larissa Gordon, Mslis, Med, Ma, Anita Lai, Mlis

Jefferson Digital Commons Reports

This quarterly report includes:

• Articles
• Conferences and Symposia
• CREATE Day Presentations
• Thesis/Dissertations
• Grand Rounds and Lectures
• Capstone Presentations
• Journals and Newsletters
• Posters
• Misc.
• What People are Saying About the Jefferson Digital Commons

A Gis Suitability Model Evaluating Habitat Characteristics Influencing Beaver (Castor Canadensis) Lodge Site Selection And Lodge Occupancy In Central Adirondacks, New York, Amanda K. Jacobs

Theses - ALL

The North American beaver (Castor canadensis) represents a quintessential example of an "ecosystem engineer." Yet the species' landscape-scale impacts on hydrology, geomorphology, and ecosystem ecology are not uniformly distributed through landscapes or time. Understanding beaver lodge site selection and lodge fidelity through time can help to predict where the greatest effects of beaver activity may occur. In this research project, I seek to understand the relationships between beaver habitat suitability, the habitat variables that currently define suitable areas, and lodge occupancy over time. Using Geographic Information Systems (GIS) to model habitat suitability, I use hydrologic, vegetative, and physiographic variables to …