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2021

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Runs Of Homozygosity In Killer Whale Genomes Provide A Global Record Of Demographic Histories, Andrew D. Foote, Rebecca Hooper, Alana Alexander, Robin W. Baird, Charles Scott Baker, Lisa Ballance, Jay Barlow, Andrew Brownlow, Tim Collins, Rochelle Constantine, Luciano Dalla Rosa, Nicholas J. Davison, John W. Durban, Ruth Esteban, Laurent Excoffier, Sarah L.Fordyce Martin, Karin A. Forney, For Full Author List, See Comments Below Dec 2021

Runs Of Homozygosity In Killer Whale Genomes Provide A Global Record Of Demographic Histories, Andrew D. Foote, Rebecca Hooper, Alana Alexander, Robin W. Baird, Charles Scott Baker, Lisa Ballance, Jay Barlow, Andrew Brownlow, Tim Collins, Rochelle Constantine, Luciano Dalla Rosa, Nicholas J. Davison, John W. Durban, Ruth Esteban, Laurent Excoffier, Sarah L.Fordyce Martin, Karin A. Forney, For Full Author List, See Comments Below

Faculty Research, Scholarly, and Creative Activity

Runs of homozygosity (ROH) occur when offspring inherit haplotypes that are identical by descent from each parent. Length distributions of ROH are informative about population history; specifically, the probability of inbreeding mediated by mating system and/or population demography. Here, we investigated whether variation in killer whale (Orcinus orca) demographic history is reflected in genome-wide heterozygosity and ROH length distributions, using a global data set of 26 genomes representative of geographic and ecotypic variation in this species, and two F1 admixed individuals with Pacific-Atlantic parentage. We first reconstructed demographic history for each population as changes in effective population size through time …


Enhancing Permanency In Children And Families (Epic): A Child Welfare Intervention For Parental Substance Abuse, Bridget Freisthler, Kathryn Maguire-Jack, Susan Yoon, Elinam Dellor, Jennifer Price Wolf Dec 2021

Enhancing Permanency In Children And Families (Epic): A Child Welfare Intervention For Parental Substance Abuse, Bridget Freisthler, Kathryn Maguire-Jack, Susan Yoon, Elinam Dellor, Jennifer Price Wolf

Faculty Research, Scholarly, and Creative Activity

Background: Across Ohio, parental substance abuse has contributed to a marked increase in the number of children in foster care. Children exposed to parental substance use have a higher likelihood of physical abuse and neglect, and consequently a variety of physical, psychological and cognitive problems. The Enhancing Permanency in Children and Families (EPIC) program is a collaborative effort between the Ohio State University College of Social Work, two county offices of the Ohio Department of Job and Family Services, two juvenile courts and local behavioral health agencies. The goal of EPIC is to use three evidence-based and evidence-informed practices to …


Potential Microplastic Release From Beached Fishing Gear In Great Britain's Region Of Highest Fishing Litter Density, Luka Seamus Wright, Imogen Ellen Napper, Richard C. Thompson Dec 2021

Potential Microplastic Release From Beached Fishing Gear In Great Britain's Region Of Highest Fishing Litter Density, Luka Seamus Wright, Imogen Ellen Napper, Richard C. Thompson

School of Biological and Marine Sciences

While land-based sources of marine plastic pollution have gained widespread attention, marine-based sources are less extensively investigated. Here, we provide the first in-depth description of abandoned, lost or otherwise discarded fishing gear (ALDFG) on northern and southern beaches of the English Southwest Peninsula, Great Britain's region of highest ALDFG density. Three distinct categories were recorded: twisted rope (0.28 ± 0.14 m−1, 17%), braided rope (0.56 ± 0.28 m−1, 33%) and filament (0.84 ± 0.41 m−1, 50%), which likely correspond to fishing rope, net and line. Estimating the disintegration of ALDFG from length and filament number suggests that it has the …


Current Status And Natural History Of The Critically Endangered Variable Harlequin Toad (Atelopus Varius) In Costa Rica, C Barrio-Amorós, G Chaves, R Puschendorf Dec 2021

Current Status And Natural History Of The Critically Endangered Variable Harlequin Toad (Atelopus Varius) In Costa Rica, C Barrio-Amorós, G Chaves, R Puschendorf

School of Biological and Marine Sciences

No abstract provided.


Coastal Adaptation To Climate Change Through Zonation: A Review Of Coastal Change Management Areas (Ccmas) In England, J. A. Kirby, G. Masselink, S. Essex, T. Poate, T. Scott Dec 2021

Coastal Adaptation To Climate Change Through Zonation: A Review Of Coastal Change Management Areas (Ccmas) In England, J. A. Kirby, G. Masselink, S. Essex, T. Poate, T. Scott

School of Biological and Marine Sciences

Climate change and accelerated rates in sea-level rise are expected to increase flooding and erosion on the world's coastlines. Coastal managers and planners face the challenge of helping communities to adapt to the changing coast. Traditionally hard engineering has been used to defend communities on the coast, but as this option becomes unsustainable and financially unviable, coastal managers are increasingly employing planning policy to mitigate the risk posed by coastal change. Zonation of coastal change areas and delineation of erosion extents, such as set-back lines, are used globally to restrict development in the coastal zone. In England there is policy …


Economic Forecasting In An Epidemic: A Break From The Past?, Hwee Kwan Chow, Keen Meng Choy Dec 2021

Economic Forecasting In An Epidemic: A Break From The Past?, Hwee Kwan Chow, Keen Meng Choy

Research Collection School Of Economics

This paper aims to investigate whether the predictive ability and behaviour of professional forecasters are different during the Covid-19 epidemic as compared with the global financial crisis of 2008 and normal times. To this end, we utilise a survey of professional forecasters in Singapore collated by the central bank to analyse the forecasting record for GDP growth and CPI inflation. We first examine the point forecasts to document the extent of forecast failure in the pandemic crisis and test for behavioural explanations of the possible sources of forecast errors such as leader following and herding behaviour. Using percentile-based summary measures …


Effect Of Cyclic Heat Stress On Feeding-Related Hypothalamic Neuropeptides Of Three Broiler Populations And Their Ancestor Jungle Fowl, Giorgio Brugaletta, Elizabeth S. Greene, Travis Tabler, Sara K. Orlowski, Federico Sirri, Sami Dridi Dec 2021

Effect Of Cyclic Heat Stress On Feeding-Related Hypothalamic Neuropeptides Of Three Broiler Populations And Their Ancestor Jungle Fowl, Giorgio Brugaletta, Elizabeth S. Greene, Travis Tabler, Sara K. Orlowski, Federico Sirri, Sami Dridi

Poultry Science Faculty Publications and Presentations

Heat stress (HS) has been increasingly jeopardizing the sustainability of the poultry production. Moreover, modern high-performing chickens are far less able to withstand HS than their predecessors due to higher growth rate and metabolic rates. Performance losses caused by HS are mainly ascribed to decreases in feed consumption. Since feed intake is tightly controlled by the hypothalamic centers of hunger and satiety, we sought to determine the effect of chronic cyclic HS on the expression of feeding-related hypothalamic neuropeptides (FRHN) in unselected chickens (i.e., the ancestor junglefowl—JF) and three broiler lines from diverse stages of genetic selection (i.e., the slow …


Modeling The Spatial Distribution Of The Current And Future Ecosystem Services Of Urban Tree Planting In Chicopee And Fall River, Massachusetts, R. Moody, N. Geron, M. Healy, J. Rogan, Deborah Martin Dec 2021

Modeling The Spatial Distribution Of The Current And Future Ecosystem Services Of Urban Tree Planting In Chicopee And Fall River, Massachusetts, R. Moody, N. Geron, M. Healy, J. Rogan, Deborah Martin

Geography

Mature urban tree canopy cover disrupts the local effects of urban heat islands and provides important ecosystem services such as energy savings through evaporation and shading, pollution removal, storm runoff control, and carbon sequestration. Sustainable urban tree canopy relies on the planting of juvenile trees. Typically, tree planting programs are only evaluated by the number of trees planted and there is a lack of analysis of juvenile trees post-planting. This study examines the value and distribution of energy savings provided by juvenile trees and how that value changes considering predicted tree growth and mortality by 2050. Using i-Tree Eco software, …


Nest Sanitation Behavior Does Not Increase The Likelihood Of Parasitic Egg Rejection In Herring Gulls, James B. Stratton, Donald C. Dearborn Dec 2021

Nest Sanitation Behavior Does Not Increase The Likelihood Of Parasitic Egg Rejection In Herring Gulls, James B. Stratton, Donald C. Dearborn

All Faculty Scholarship

Birds’ behavioral response to brood parasitism can be influenced not only by evolution but also by context and individual experience. This could include nest sanitation, in which birds remove debris from their nests. Ultimately, nest sanitation behavior might be an evolutionary precursor to the rejection of parasitic eggs. Proximately, the context or experience of performing nest sanitation behavior might increase the detection or prime the removal of parasitic eggs, but evidence to date is limited. We tested incubation-stage nests of herring gulls Larus argentatus to ask whether nest sanitation increased parasitic egg rejection. In an initial set of 160 single-object …


Comparison Of Sample Types From White-Tailed Deer (Odocoileus Virginianus) For Dna Extraction And Analyses, Jessie Edson, Justin Brown, William L. Miller, David Walter Dec 2021

Comparison Of Sample Types From White-Tailed Deer (Odocoileus Virginianus) For Dna Extraction And Analyses, Jessie Edson, Justin Brown, William L. Miller, David Walter

University Faculty Publications and Creative Works

Collection of biological samples for DNA is necessary in a variety of disciplines including disease epidemiology, landscape genetics, and forensics. Quantity and quality of DNA varies depending on the method of collection or media available for collection (e.g., blood, tissue, fecal). Blood is the most common sample collected in vials or on Whatman Flinders Technology Associates (FTA) cards with short- and long-term storage providing adequate DNA for study objectives. The focus of this study was to determine if biological samples stored on Whatman FTA Elute cards were a reasonable alternative to traditional DNA sample collection, storage, and extraction. Tissue, nasal …


An Outbreak Of Canine Schistosomiasis In Utah Acquisition Of A New Snail Host (Galba Humilis) By Heterobilharzia Americana, A Pathogenic Parasite On The Move, Eric S. Loker, Scott Z. Dolginow, Suzanne Pape, Colin D. Topper, Randall J. Dejong Dec 2021

An Outbreak Of Canine Schistosomiasis In Utah Acquisition Of A New Snail Host (Galba Humilis) By Heterobilharzia Americana, A Pathogenic Parasite On The Move, Eric S. Loker, Scott Z. Dolginow, Suzanne Pape, Colin D. Topper, Randall J. Dejong

University Faculty Publications and Creative Works

Parasites with complex life cycles engaging multiple host species living among different environments well-exemplify the value of a cross-cutting One Health approach to understanding fundamental concerns like disease emergence or spread. Here we provide new information regarding a pathogenic schistosome trematode parasite of both wild and domestic mammals that has recently expanded its known range from mesic/wet environments of the southeastern United States to the arid southwest. In 2018, 12 dogs living near a man-made pond in Moab, Utah, were found positive for Heterobilharzia americana, the most westerly report of this endemic North American schistosome, and the first from Utah. …


The Landscape Of Renal Replacement Therapy In Veterans Affairs Medical Center Intensive Care Units, Chandan Vangala, Maulin Shah, Natasha N Dave, Layth Al Attar, Sankar D Navaneethan, Venkat Ramanathan, Susan Crowley, Wolfgang C Winkelmayer Dec 2021

The Landscape Of Renal Replacement Therapy In Veterans Affairs Medical Center Intensive Care Units, Chandan Vangala, Maulin Shah, Natasha N Dave, Layth Al Attar, Sankar D Navaneethan, Venkat Ramanathan, Susan Crowley, Wolfgang C Winkelmayer

Faculty, Staff and Students Publications

BACKGROUND: Outpatient dialysis is standardized with several evidence-based measures of adequacy and quality that providers aim to meet while providing treatment. By contrast, in the intensive care unit (ICU) there are different types of prolonged and continuous renal replacement therapies (PIRRT and CRRT, respectively) with varied strategies for addressing patient care and a dearth of nationally accepted quality parameters. To eventually describe appropriate quality measures for ICU-related renal replacement therapy (RRT), we first aimed to capture the variety and prevalence of basic strategies and equipment utilized in the ICUs of Veteran Affairs (VA) medical facilities with inpatient hemodialysis capabilities.

METHODS: …


Transient Ascaris Suum Larval Migration Induces Intractable Chronic Pulmonary Disease And Anemia In Mice, Yifan Wu, Evan Li, Morgan Knight, Grace Adeniyi-Ipadeola, Li-Zhen Song, Alan R Burns, Ana Clara Gazzinelli-Guimaraes, Ricardo Fujiwara, Maria Elena Bottazzi, Jill E Weatherhead Dec 2021

Transient Ascaris Suum Larval Migration Induces Intractable Chronic Pulmonary Disease And Anemia In Mice, Yifan Wu, Evan Li, Morgan Knight, Grace Adeniyi-Ipadeola, Li-Zhen Song, Alan R Burns, Ana Clara Gazzinelli-Guimaraes, Ricardo Fujiwara, Maria Elena Bottazzi, Jill E Weatherhead

Faculty, Staff and Students Publications

Ascariasis is one of the most common infections in the world and associated with significant global morbidity. Ascaris larval migration through the host's lungs is essential for larval development but leads to an exaggerated type-2 host immune response manifesting clinically as acute allergic airway disease. However, whether Ascaris larval migration can subsequently lead to chronic lung diseases remains unknown. Here, we demonstrate that a single episode of Ascaris larval migration through the host lungs induces a chronic pulmonary syndrome of type-2 inflammatory pathology and emphysema accompanied by pulmonary hemorrhage and chronic anemia in a mouse model. Our results reveal that …


Genetic Testing In Ambulatory Cardiology Clinics Reveals High Rate Of Findings With Clinical Management Implications, David R Murdock, Eric Venner, Donna M Muzny, Ginger A Metcalf, Mullai Murugan, Trevor D Hadley, Varuna Chander, Paul S De Vries, Xiaoming Jia, Aliza Hussain, Ali M Agha, Aniko Sabo, Shoudong Li, Qingchang Meng, Jianhong Hu, Xia Tian, Michelle Cohen, Victoria Yi, Christie L Kovar, Marie-Claude Gingras, Viktoriya Korchina, Chad Howard, Daniel L Riconda, Stacey Pereira, Hadley S Smith, Zohra A Huda, Alexandria Buentello, Patricia R Marino, Lee Leiber, Ashok Balasubramanyam, Christopher I Amos, Andrew B Civitello, Mihail G Chelu, Ronald Maag, Amy L Mcguire, Eric Boerwinkle, Xander H T Wehrens, Christie M Ballantyne, Richard A Gibbs Dec 2021

Genetic Testing In Ambulatory Cardiology Clinics Reveals High Rate Of Findings With Clinical Management Implications, David R Murdock, Eric Venner, Donna M Muzny, Ginger A Metcalf, Mullai Murugan, Trevor D Hadley, Varuna Chander, Paul S De Vries, Xiaoming Jia, Aliza Hussain, Ali M Agha, Aniko Sabo, Shoudong Li, Qingchang Meng, Jianhong Hu, Xia Tian, Michelle Cohen, Victoria Yi, Christie L Kovar, Marie-Claude Gingras, Viktoriya Korchina, Chad Howard, Daniel L Riconda, Stacey Pereira, Hadley S Smith, Zohra A Huda, Alexandria Buentello, Patricia R Marino, Lee Leiber, Ashok Balasubramanyam, Christopher I Amos, Andrew B Civitello, Mihail G Chelu, Ronald Maag, Amy L Mcguire, Eric Boerwinkle, Xander H T Wehrens, Christie M Ballantyne, Richard A Gibbs

Faculty, Staff and Students Publications

PURPOSE: Cardiovascular disease (CVD) is the leading cause of death in adults in the United States, yet the benefits of genetic testing are not universally accepted.

METHODS: We developed the "HeartCare" panel of genes associated with CVD, evaluating high-penetrance Mendelian conditions, coronary artery disease (CAD) polygenic risk, LPA gene polymorphisms, and specific pharmacogenetic (PGx) variants. We enrolled 709 individuals from cardiology clinics at Baylor College of Medicine, and samples were analyzed in a CAP/CLIA-certified laboratory. Results were returned to the ordering physician and uploaded to the electronic medical record.

RESULTS: Notably, 32% of patients had a genetic finding with clinical …


Why So Negative? Street Literature And Its Negative Effects On The African American Psyche, Lilly Lamia Simone Dec 2021

Why So Negative? Street Literature And Its Negative Effects On The African American Psyche, Lilly Lamia Simone

Theses (2016-Present)

Urban literature, more widely known as street lit is a genre of literature that glorifies and exaggerates drugs, violence, and sex in the lives of its African American characters. Through Street lit readers are introduced to the black man as a figure of power through illegal activity in his community, and black women as either overly aggressive or figures in need of protection. These novels choose loyalty over family, drugs, and athleticism over education, and money and power over morality. These novels and their glorifications cause African American people to see dream lives in goals that are not only unattainable …


Compound-20 (Analog Of Curcumin) Prevents Acrolein-Induced Changes In Rats, Nelson Chijioke Nwaiwu Dec 2021

Compound-20 (Analog Of Curcumin) Prevents Acrolein-Induced Changes In Rats, Nelson Chijioke Nwaiwu

Theses (2016-Present)

Research has shown that acrolein, a known environmental pollutant, contributes to generation of free radicals leading to oxidative stress and physiological damage. Curcumin has been known to improve damages from oxidative stress due to its antioxidative and anti-inflammatory properties. It has been reported that to exert such an effect, a large dose of curcumin needs to be consumed on daily bases due to its high excretion through kidney. Here in collaboration with Dr. Chelliah from department of pharmaceutical, an analog form of curcumin (compound-20) was synthesized with promising more potent activity and absorption. The objective of this study was to …


Toxicity Of Indoor Dust-Derived Trace Elements And Organic Contaminants Impact On Normal Human Colon Epithelial Cells, Noura Abdulrahman Dec 2021

Toxicity Of Indoor Dust-Derived Trace Elements And Organic Contaminants Impact On Normal Human Colon Epithelial Cells, Noura Abdulrahman

Theses (2016-Present)

Indoor dust stands out as a burgeoning challenge in society due to its implication on people’s health. Exposure to toxic dust particles occurs in different ways that include inhalation, ingestion, and dermal contact. In the hindsight, many people spend most of their time indoors exposing themselves to high levels of dust. Notably, different groups of individuals present varied risk levels to the toxicity of particles with vulnerable persons being susceptible to adverse effects of these contaminants. This includes the elderly, children, and immunocompromised individuals. The study examines the impacts of two variables that are trace elements (TMD) and organic contaminants …


Bicuspid Aortic Valve In Pregnancy Complicated By Aortic Valve Vegetation, Aortic Root Abscess, And Aortic Insufficiency, Shan He, Christopher A Huynh, Yi Deng, Sandeep Markan, Anvinh Nguyen Dec 2021

Bicuspid Aortic Valve In Pregnancy Complicated By Aortic Valve Vegetation, Aortic Root Abscess, And Aortic Insufficiency, Shan He, Christopher A Huynh, Yi Deng, Sandeep Markan, Anvinh Nguyen

Faculty, Staff and Students Publications

A 39-year-old patient presented to our Labor and Delivery unit with fever and nausea in the context of recent bacteriuria. She was found to be in sepsis due to an incidental bicuspid aortic valve (BAV) complicated by aortic valvular vegetations, severe aortic insufficiency, and aortic root abscess, requiring an emergent cesarean section. Three days after delivery, the patient successfully underwent a mechanical aortic valve replacement and root reconstruction. In this case report, medical, surgical, and anesthetic management of parturient patients with BAV are discussed. The management of this congenital valvulopathy and vasculopathy is complicated by the extensive hemodynamic and cardiovascular …


The Weaker Sex: Male Lingcod (Ophiodon Elongatus) With Blue Color Polymorphism Are More Burdened By Parasites Than Are Other Sex–Color Combinations, Chelsea L. Wood, Katie L. Leslie, Alanna Greene, Laurel S. Lam, Bonnie Basnett, Scott L. Hamilton, Jameal F. Samhouri Dec 2021

The Weaker Sex: Male Lingcod (Ophiodon Elongatus) With Blue Color Polymorphism Are More Burdened By Parasites Than Are Other Sex–Color Combinations, Chelsea L. Wood, Katie L. Leslie, Alanna Greene, Laurel S. Lam, Bonnie Basnett, Scott L. Hamilton, Jameal F. Samhouri

Faculty Research, Scholarly, and Creative Activity

The unusual blue color polymorphism of lingcod (Ophiodon elongatus) is the subject of much speculation but little empirical research; ~20% of lingcod individuals exhibit this striking blue color morph, which is discrete from and found within the same populations as the more common brown morph. In other species, color polymorphisms are intimately linked with host–parasite interactions, which led us to ask whether blue coloration in lingcod might be associated with parasitism, either as cause or effect. To test how color and parasitism are related in this host species, we performed parasitological dissection of 89 lingcod individuals collected across more than …


Head-Mounted Accelerometry Accurately Detects Prey Capture In California Sea Lions, Mason R. Cole, Jenifer A. Zeligs, Stefani Skrovan, Birgitte I. Mcdonald Dec 2021

Head-Mounted Accelerometry Accurately Detects Prey Capture In California Sea Lions, Mason R. Cole, Jenifer A. Zeligs, Stefani Skrovan, Birgitte I. Mcdonald

Faculty Research, Scholarly, and Creative Activity

Detecting when and where animals feed is key to understanding their ecophysiology, but our ability to collect these data in marine mammals remains limited. Here, we test a tag-based accelerometry method to detect prey capture in California sea lions. From synchronized underwater video and acceleration data of two trained sea lions, we isolated a combined acceleration and Jerk pattern that reliably indicated prey capture in training datasets. We observed a stereotyped feeding motion in underwater video that included (1) mouth opening while approaching prey; (2) head deceleration to allow initial suction or prey engulfment, and (3) jaw closure. This motion …


Punnett Squares Or Protein Production? The Expert–Novice Divide For Conceptions Of Genes And Gene Expression, Dina L. Newman, Aeowynn Coakley, Aidan Link, Korinne Mills, L. Kate Wright Dec 2021

Punnett Squares Or Protein Production? The Expert–Novice Divide For Conceptions Of Genes And Gene Expression, Dina L. Newman, Aeowynn Coakley, Aidan Link, Korinne Mills, L. Kate Wright

Faculty Research, Scholarly, and Creative Activity

Concepts of molecular biology and genetics are difficult for many biology undergraduate students to master yet are crucial for deep understanding of how life works. By asking students to draw their ideas, we attempted to uncover the mental models about genes and gene expression held by biology students (n = 23) and experts (n = 18) using semistructured interviews. A large divide was identified between novice and expert conceptions. While experts typically drew box-and-line representations and thought about genes as regions of DNA that were used to encode products, students typically drew whole chromosomes rather than focusing on gene structure …


Predicted Vitamin D Status And Colorectal Cancer Incidence In The Black Women's Health Study, Lauren E Barber, Kimberly A Bertrand, Jessica L Petrick, Hanna Gerlovin, Laura F White, Lucile L Adams-Campbell, Lynn Rosenberg, Hemant K Roy, Julie R Palmer Dec 2021

Predicted Vitamin D Status And Colorectal Cancer Incidence In The Black Women's Health Study, Lauren E Barber, Kimberly A Bertrand, Jessica L Petrick, Hanna Gerlovin, Laura F White, Lucile L Adams-Campbell, Lynn Rosenberg, Hemant K Roy, Julie R Palmer

Faculty, Staff and Students Publications

BACKGROUND: Observational studies, mostly among White populations, suggest that low vitamin D levels increase colorectal cancer risk. African Americans, who are disproportionately burdened by colorectal cancer, often have lower vitamin D levels compared with other populations.

METHODS: We assessed predicted vitamin D score in relation to colorectal cancer among 49,534 participants in the Black Women's Health Study, a cohort of African American women followed from 1995 to 2017 through biennial questionnaires. We derived predicted vitamin D scores at each questionnaire cycle for all participants using a previously validated prediction model based on actual 25-hydroxyvitamin D values from a subset of …


Interaction Between Alcohol Consumption And Pnpla3 Variant In The Prevalence Of Hepatic Steatosis In The Us Population, Mariana Lazo, Usama Bilal, Mack C Mitchell, James Potter, Ruben Hernaez, Jeanne M Clark Dec 2021

Interaction Between Alcohol Consumption And Pnpla3 Variant In The Prevalence Of Hepatic Steatosis In The Us Population, Mariana Lazo, Usama Bilal, Mack C Mitchell, James Potter, Ruben Hernaez, Jeanne M Clark

Faculty, Staff and Students Publications

BACKGROUND & AIMS: To our knowledge, the interaction between alcohol consumption and PNPLA3 genotype on hepatic steatosis has not been explored in a representative sample. To examine the interaction between alcohol consumption and PNPLA3 genotype on hepatic steatosis in the US adult population.

METHODS: Cross-sectional study of 4,674 adult participants of the Third National Health and Nutrition Examination Survey, Phase 2 (1991-1994) with data on PNPLA3 genotype, self-reported alcohol consumption, ultrasound-defined hepatic steatosis and socio-demographic characteristics.

RESULTS: In 1991-1994 in the U.S. population, the weighted allele frequency of the G (risk) allele of the rs738409 at PNPLA3 was 25.4%. We …


Associations Of High-Sensitivity Troponin And Natriuretic Peptide Levels With Outcomes After Intensive Blood Pressure Lowering: Findings From The Sprint Randomized Clinical Trial, Jarett D Berry, Vijay Nambi, Walter T Ambrosius, Haiying Chen, Anthony A Killeen, Addison Taylor, Robert D Toto, Elsayed Z Soliman, John W Mcevoy, Ambarish Pandey, Parag H Joshi, Stefan Blankenberg, Dalane W Kitzman, Christie M Ballantyne, James A De Lemos Dec 2021

Associations Of High-Sensitivity Troponin And Natriuretic Peptide Levels With Outcomes After Intensive Blood Pressure Lowering: Findings From The Sprint Randomized Clinical Trial, Jarett D Berry, Vijay Nambi, Walter T Ambrosius, Haiying Chen, Anthony A Killeen, Addison Taylor, Robert D Toto, Elsayed Z Soliman, John W Mcevoy, Ambarish Pandey, Parag H Joshi, Stefan Blankenberg, Dalane W Kitzman, Christie M Ballantyne, James A De Lemos

Faculty, Staff and Students Publications

IMPORTANCE: Elevated high-sensitivity cardiac troponin T (hscTnT) and N-terminal pro-B-type natriuretic peptide (NTproBNP) levels are associated with risk of heart failure (HF) and mortality among individuals in the general population. However, it is unknown if this risk is modifiable.

OBJECTIVE: To test the hypothesis that elevated hscTnT and NTproBNP levels would identify individuals with the greatest risk for mortality and HF and the largest benefit associated with intensive systolic blood pressure (SBP) lowering.

DESIGN, SETTING, AND PARTICIPANTS: This is a nonprespecified post hoc analysis of the multicenter, prospective, randomized clinical Systolic Blood Pressure Intervention Trial (SPRINT), conducted from October 20, …


Learning To Iteratively Solve Routing Problems With Dual-Aspect Collaborative Transformer, Yining Ma, Jingwen Li, Zhiguang Cao, Wen Song, Le Zhang, Zhenghua Chen, Jing Tang Dec 2021

Learning To Iteratively Solve Routing Problems With Dual-Aspect Collaborative Transformer, Yining Ma, Jingwen Li, Zhiguang Cao, Wen Song, Le Zhang, Zhenghua Chen, Jing Tang

Research Collection School Of Computing and Information Systems

Recently, Transformer has become a prevailing deep architecture for solving vehicle routing problems (VRPs). However, it is less effective in learning improvement models for VRP because its positional encoding (PE) method is not suitable in representing VRP solutions. This paper presents a novel Dual-Aspect Collaborative Transformer (DACT) to learn embeddings for the node and positional features separately, instead of fusing them together as done in existing ones, so as to avoid potential noises and incompatible correlations. Moreover, the positional features are embedded through a novel cyclic positional encoding (CPE) method to allow Transformer to effectively capture the circularity and symmetry …


Increased Mitochondrial Activity Upon Catsper Channel Activation Is Required For Mouse Sperm Capacitation, Juan J Ferreira, Adriana Cassina, Pilar Irigoyen, Mariana Ford, Santiago Pietroroia, Nikita Peramsetty, Rafael Radi, Celia M Santi, Rossana Sapiro Dec 2021

Increased Mitochondrial Activity Upon Catsper Channel Activation Is Required For Mouse Sperm Capacitation, Juan J Ferreira, Adriana Cassina, Pilar Irigoyen, Mariana Ford, Santiago Pietroroia, Nikita Peramsetty, Rafael Radi, Celia M Santi, Rossana Sapiro

2020-Current year OA Pubs

To fertilize an oocyte, sperm must undergo several biochemical and functional changes known as capacitation. A key event in capacitation is calcium influx through the cation channel of sperm (CatSper). However, the molecular mechanisms of capacitation downstream of this calcium influx are not completely understood. Capacitation is also associated with an increase in mitochondrial oxygen consumption, and several lines of evidence indicate that regulated calcium entry into mitochondria increases the efficiency of oxidative respiration. Thus, we hypothesized that calcium influx through CatSper during capacitation increases mitochondrial calcium concentration and mitochondrial efficiency and thereby contributes to sperm hyperactivation and fertilization capacity. …


Towards Non-Intrusive Camera-Based Heart Rate Variability Estimation In The Car Under Naturalistic Condition, Shu Liu, Kevin Koch, Zimu Zhou, Martin Maritsch, Xiaoxi He, Elgar Fleisch, Felix Wortmann Dec 2021

Towards Non-Intrusive Camera-Based Heart Rate Variability Estimation In The Car Under Naturalistic Condition, Shu Liu, Kevin Koch, Zimu Zhou, Martin Maritsch, Xiaoxi He, Elgar Fleisch, Felix Wortmann

Research Collection School Of Computing and Information Systems

Driver status monitoring systems are a vital component of smart cars in the future, especially in the era when an increasing amount of time is spent in the vehicle. The heart rate (HR) is one of the most important physiological signals of driver status. To infer HR of drivers, the mainstream of existing research focused on capturing subtle heartbeat-induced vibration of the torso or leveraged photoplethysmography (PPG) that detects cardiac cycle-related blood volume changes in the microvascular. However, existing approaches rely on dedicated sensors that are expensive and cumbersome to be integrated or are vulnerable to ambient noise. Moreover, their …


Biochemical And Immuno-Histochemical Localization Of Type Iia Procollagen In Annulus Fibrosus Of Mature Bovine Intervertebral Disc, Audrey Mcalinden, David M Hudson, Aysel A Fernandes, Soumya Ravindran, Russell J Fernandes Dec 2021

Biochemical And Immuno-Histochemical Localization Of Type Iia Procollagen In Annulus Fibrosus Of Mature Bovine Intervertebral Disc, Audrey Mcalinden, David M Hudson, Aysel A Fernandes, Soumya Ravindran, Russell J Fernandes

2020-Current year OA Pubs

For next generation tissue-engineered constructs and regenerative medicine to succeed clinically, the basic biology and extracellular matrix composition of tissues that these repair techniques seek to restore have to be fully determined. Using the latest reagents coupled with tried and tested methodologies, we continue to uncover previously undetected structural proteins in mature intervertebral disc. In this study we show that the "embryonic" type IIA procollagen isoform (containing a cysteine-rich amino propeptide) was biochemically detectable in the annulus fibrosus of both calf and mature steer caudal intervertebral discs, but not in the nucleus pulposus where the type IIB isoform was predominantly …


Deletion Of Type Viii Collagen Reduces Blood Pressure, Increases Carotid Artery Functional Distensibility And Promotes Elastin Deposition, Amanda L Mohabeer, Jeffrey T Kroetsch, Meghan Mcfadden, Negin Khosraviani, Thomas J Broekelmann, Guangpei Hou, Hangjun Zhang, Yu-Qing Zhou, Minyao Wang, Anthony O Gramolini, Robert P Mecham, Scott P Heximer, Steffen-Sebastian Bolz, Michelle P Bendeck Dec 2021

Deletion Of Type Viii Collagen Reduces Blood Pressure, Increases Carotid Artery Functional Distensibility And Promotes Elastin Deposition, Amanda L Mohabeer, Jeffrey T Kroetsch, Meghan Mcfadden, Negin Khosraviani, Thomas J Broekelmann, Guangpei Hou, Hangjun Zhang, Yu-Qing Zhou, Minyao Wang, Anthony O Gramolini, Robert P Mecham, Scott P Heximer, Steffen-Sebastian Bolz, Michelle P Bendeck

2020-Current year OA Pubs

Arterial stiffening is a significant predictor of cardiovascular disease development and mortality. In elastic arteries, stiffening refers to the loss and fragmentation of elastic fibers, with a progressive increase in collagen fibers. Type VIII collagen (Col-8) is highly expressed developmentally, and then once again dramatically upregulated in aged and diseased vessels characterized by arterial stiffening. Yet its biophysical impact on the vessel wall remains unknown. The purpose of this study was to test the hypothesis that Col-8 functions as a matrix scaffold to maintain vessel integrity during extracellular matrix (ECM) development. These changes are predicted to persist into the adult …


Etherlearn: Decentralizing Learning Via Blockchain, Nguyen Binh Duong Ta, Tian Jun Joel Yang Dec 2021

Etherlearn: Decentralizing Learning Via Blockchain, Nguyen Binh Duong Ta, Tian Jun Joel Yang

Research Collection School Of Computing and Information Systems

In institutes of higher learning, most of the time course material development and delivery follow a centralized model which is fully lecturer-controlled. In this model, engaging students as partners in learning is a challenging problem as: 1) students are usually hesitant to contribute due to the fear of getting it wrong, 2) not much incentive for them to put in the extra effort, and 3) current online learning systems lack adequate facilities to support seamless and anonymous interactions between students. In this work, we propose EtherLearn, a blockchain based peer-learning system to distribute the control of how course material and …