Digital Commons Network^™

Creating Singapore’S Longest Monthly Rainfall Record From 1839 To The Present, Elaine Gao, Bertrand Timbal, Fiona Williamson

Research Collection School of Social Sciences

Currently,the identification of decadal variability is limited by the lack of long-termmeteorological datasets; Singapore’s reliable contemporary network of automaticmeteorological stations (AWS) provides only about 30 years of rainfall data for thewhole island. In this study, rainfall data, sourced fromhistorical archives and recording monthly rainfall pre-dating the start ofofficial MacRitchie observations, are compiled from various locations acrossthe island. By making use of the contemporary AWS network, we evaluate thespatial relationship of rainfall between the historical sites and the currentMacRitchie site. This enables us to reconstruct historical rainfall atMacRitchie using the archive data, thereby building a single-location extendedrainfall record (though discontinuous) from …

Investigating The Single Cell Heterogeneity And Physiological Impact Of Mistranslation, Christopher Evans

Dissertations and Theses (Open Access)

Bacterial populations grow clonal populations; however, individual cells have a variety of phenotypes. The physiological heterogeneity observed in populations has been attributed to variations in the processes of gene expression. For example, promoter expression has been shown to be heterogeneous within a population and contribute to increased stress tolerance in a subpopulation of cells. In comparison to transcription, the influence of translation on single cells is unclear. In this study, my collaborators and I have developed a dual-fluorescence reporter that allows us to measure the mistranslation rate in single cells in vivo. Using this reporter, we found that mistranslation …

A Compressed Sensing Approach To Detect Immobilized Nanoparticles Using Superparamagnetic Relaxometry, Sara Thrower

Dissertations and Theses (Open Access)

Superparamagnetic relaxometry (SPMR) is an emerging technology that leverages the unique properties of biologically targeted superparamagnetic iron oxide nanoparticles to detect cancer. The use of ultra-sensitive sensors enables SPMR to detect tumors ten times smaller than current imaging methods. Reconstructing the distribution of cancer-bound nanoparticles from SPMR measurements is challenging because the inverse problem is ill posed. Current methods of source reconstruction rely on prior knowledge of the number of clusters of bound nanoparticles and their approximate locations, which is not known in clinical applications. In this work, we present a novel reconstruction algorithm based on compressed sensing methods that …

3d Scintillator Detector Quenching Characterization For Scanning Proton Beams, Fahed Alsanea

Dissertations and Theses (Open Access)

Proton pencil beam scanning is becoming the standard treatment delivery technique for proton therapy centers. Scanned proton pencil beams provide a highly conformal dose distribution. The complex dose distribution poses challenges for quality assurance measurements leading to sophisticated detector setups and time consuming measurements. Fast 3D measurements are therefore desirable to verify the complex dose distribution and to enable the utilization of the full potential of proton therapy. The overall objective of this project is to improve volumetric scintillators detectors to provide 3D measurements for applications for beam commissioning, quality assurance program, and patient-specific treatment delivery verification.

Detectors based on …

Substellar And Low-Mass Dwarf Identification With Near-Infrared Imaging Space Observatories, Benne W. Holwerda, J. S. Bridge, R. Ryan, M. A. Kenworthy, N. Pirzkal, M. Andersen, S. Wilkins, R. Smit, S. R. Bernard, T. Meshkat, R. Steele, R. C. Bouwens

Faculty and Staff Scholarship

Aims. We aim to evaluate the near-infrared colors of brown dwarfs as observed with four major infrared imaging space observatories: the Hubble Space Telescope (HST), the James Webb Space Telescope (JWST), the Euclid mission, and the WFIRST telescope. Methods. We used the SPLAT SPEX/ISPEX spectroscopic library to map out the colors of the M-, L-, and T-type dwarfs. We have identified which color-color combination is optimal for identifying broad type and which single color is optimal to then identify the subtype (e.g., T0-9). We evaluated each observatory separately as well as the narrow-field (HST and JWST) and wide-field (Euclid and …

The Effect Of Item Stem And Response Option Length On The Item Analysis Outcomes Of A Career And Technical Education Multiple Choice Assessment, Tina M. Koepf

Dissertations

Critical decisions in Career and Technical Education (CTE) can be based on assessment outcomes, requiring an essential focus on continuous improvement initiatives to provide increased multiple choice (MC) assessment validity. Previous research has determined that the presence of flawed test items negatively impacts student success; therefore, an MC taxonomy has been established and used in the assessment industry. While rigorous and successful Career and Technical Education (CTE) programs that enroll high-level academic students exist, many CTE programs enroll students with a wide spectrum of academic ability. Because many CTE students often have inferior reading skills, it is necessary to take …

Computational Quantum Chemistry Studies Of The Interactions Of Amino Acids Side Chains With The Guanine Radical Cation., Edward Acheampong

Electronic Theses and Dissertations

Guanine is generally accepted as the most easily oxidized DNA base when cells are subjected to ionizing radiation, photoionization or photosensitization. At pH 7, the midpoint reduction potential is on the order of 0.2 – 0.3 V higher than those of the radicals of e.g. tyrosine, tryptophan cysteine and histidine, so that the radical “repair” (or at least, a thermodynamically favorable reaction) involving these amino acids is feasible. Computational quantum studies have been done on tyrosine, tryptophan, cysteine and histidine side chains as they appear in histones. Density functional theory was employed using B3LYP/6-31G+ (d, p) basis set to study …

Comparisons Between Movement Onset Identification Methods Used In Isometric Mid-Thigh Pull Test, Junshi Liu

Electronic Theses and Dissertations

This dissertation aimed to explore the usefulness of using force derivatives for onset detection in the isometric mid-thigh pull test. First, we examined applications of three differential calculus principles, first and second derivative, and curvature using visual detection as a reference under different baseline conditions. Second, we compared the best derivative method to a threshold-based method using visual detection as a reference. Results of our first investigation showed trivial differences between many differential calculus methods and visual detection. However, statistical differences exceeding a trivial effect was observed when instantaneous force and rate of force develop were examined. Through the first …

Basic Academic Skills And Post-Secondary Technical Education, Janet Humphreys Latimer

Electronic Theses and Dissertations

The purpose of this quantitative study was to determine if there is a significant difference in WorkKeys score, skills score, theory score, and job placement rates as compared by credential and program of study at a technical college in Tennessee. The study used data retrieved from a WorkKeys database and SIMS (Student Information Management System) at a technical college. The population consisted of 445 students in seven programs from 2010-2016 who had participated in the WorkKeys online academic training modules.

The dependent variables for the study were WorkKeys score, skill score, and theory score. The independent variables were job placement …

A Normal Form For Words In The Temperley-Lieb Algebra And The Artin Braid Group On Three Strands, Jack Hartsell

Electronic Theses and Dissertations

The motivation for this thesis is the computer-assisted calculation of the Jones poly- nomial from braid words in the Artin braid group on three strands, denoted B3. The method used for calculation of the Jones polynomial is the original method that was created when the Jones polynomial was first discovered by Vaughan Jones in 1984. This method utilizes the Temperley-Lieb algebra, and in our case the Temperley-Lieb Algebra on three strands, denoted A3, thus generalizations about A3 that assist with the process of calculation are pursued.

Relative Permittivity As A Function Of Co-Solvent And Impedance Spectroscopy For Quantifying Anions In Solution, Yahya Sami Alseiha

Electronic Theses and Dissertations

This work measured relative permittivity from 15.0 to 55.0 °C of aqueous solutions containing acetone or tetrahydrofuran using a BI 870 dielectric meter. A cubic polynomial fit resulted in coefficients for calculating permittivity as a function of temperature and mole fraction. Literature values for other co-solvent system resulted in similar polynomial coefficients. Using BI 870, permittivity measurements of ionic solutions were not possible because of high conductivity. A simple method using impedance spectroscopy measured these solutions. Impedance decreases with increasing temperature and decreases with increasing ionic strength. Due to the temperature dependence of impedance, all measurements were at 25.0 °C. …

Improving Sinkhole Mapping Using Lidar Data And Locating Sinkhole Hotspots In Johnson City, Tn, Kingsley Fasesin

Electronic Theses and Dissertations

Predicting infrastructure damage and economic impact of sinkholes requires high accuracy mapping distribution and development. The study mapped sinkholes and sinkhole hotpsots in Johnson City, TN using LiDAR-derived Digital Elevation Model (DEM) and a database of known sinkholes which were matched to LiDAR-derived depressions. For all matched depressions (n = 404), three metrics were calculated: circularity index, ratio of length to width of the Minimum Bounding Rectangle (MBR) and percent coverage of the MBR by the depression, and 3,634 new sinkholes were identified. Newly developed hotspots were identified in north Johnson City and other areas in the south near the …

Dreadd Targeting Projections From The Nucleus Accumbens To The Ventral Pallidum With Nicotine Self-Administration, Amanda Smith

Electronic Theses and Dissertations

Projections from the Nucleus Accumbens (NAc) to the Ventral Pallidum (VP) play a critical role in motivation and reward. Rewards and reward-associated cues are thought to alter this pathway by suppressing GABA release to the VP, however, the role of the NAc to VP pathway has never been investigated with regard to nicotine self-administration. We hypothesized that increasing GABAergic signaling from the NAc to the VP would decrease the reinforcing effects of nicotine. To increase GABA release, CRE dependent DREADD was expressed in the NAc of male rats. Administration of low dose clozapine activated the DREADD receptor and showed a …

The Effects Of Using An Information Literacy Model On The Information Seeking Behavior Of Sixth-Grade Students, Jessica L. Kohout-Tailor

All Dissertations

This action research study describes how teaching an information literacy model affects the information behavior of sixth-grade students. The theoretical framework that supported this study was Carol Kuhlthau’s Information Search Process or ISP (1989). This study used a sequential mixed-methods design to examine the following questions: “How will teaching the Simple Four information literacy model (Alewine, 2006) to sixth-grade students affect their information seeking behavior?” The study also explored the effects the model had on students’ affective behavior through the second research question: “How will teaching the Simple Four information literacy model (Alewine, 2006) to sixth-grade students affect their confidence …

The Emac Scheme For Navier-Stokes Simulations, And Application To Flow Past Bluff Bodies, Sergey Charnyi

All Dissertations

The Navier-Stokes equations model the evolution of water, oil, and air flow (air under 220 m.p.h.), and therefore the ability to solve them is important in a wide array of engineering design problems. However, analytic solution of these equations is generally not possible, except for a few trivial cases, and therefore numerical methods must be employed to obtain solutions. In the present dissertation we address several important issues in the area of computational fluid dynamics. The first issue is that in typical discretizations of the Navier-Stokes equations such as the mixed finite element method, the conservation of mass is enforced …

Tight Representations Of Specially-Structured 0-1 Linear, Quadratic, And Polynomial Programs, Audrey N. Devries

All Dissertations

This research derives improved mathematical representations for various expressions of binary variables. There are three main efforts, consisting of: the Target Visitation Problem (TVP), the Quadratic Linear Ordering Problem (QLOP), and a special family of monomials of binary variables. For the first two efforts, which are known in the literature to be (mixed) 0-1 programs, we derive new families of valid inequalities that tighten existing forms and lead to superior performance. We give computational experience to show the advantages of our approaches. For the third effort, we provide an explicit convex hull representation for special forms of monomials of binary …

Computational Approaches To Understanding Structure-Function Relationships At The Intersection Of Cellular Organization, Mechanics, And Electrophysiology, Tyler George Harvey

All Dissertations

The heart is a complex mechanical and electrical environment and small changes at the cellular and subcellular scale can have profound impacts at the tissue, organ, and organ system levels. The goal of this research is to better understand structure-function relationships at these cellular and subcellular levels of the cardiac environment. This improved understanding may prove increasingly important as medicine begins shifting toward engineered replacement tissues and organs. Specifically, we work towards this goal by presenting a framework to automatically create finite element models of cells based on optical images. This framework can be customized to model the effects of …

Augmenting A Hazard Analysis Method With Error Propagation Information For Safety-Critical Systems, Fryad Khalid M. Rashid

All Dissertations

Safety-critical systems need specific activities in the software development life cycle to ensure that the system will operate safely. The objective of this dissertation is to develop a new safety analysis method to identify hazards. The method uses error propagation information and the internal structure rather than the interfaces of a system. We propose development procedures to augment STPA (System-Theoretic Process Analysis) with error propagation information derived from the architecture description of a system represented in the AADL (Architecture Analysis Design Language). We will focus on how the AADL error ontology can be used to assist in identifying errors, how …

The Effects Of Various Retort Motions On The Rate Of Heat Penetration Of A Food Simulant In Pouches, Mollye Macnaughton

All Dissertations

Processing foods in a retort is a reliable and established method of creating sterile and shelf stable products. The formula of the product and the package size dictates the processing time. Rotary retorts were invented to agitate cans to reduce the processing times and create uniform heating within the can. Recently, horizontal reciprocating agitation has become a feature of retorts referred to as Gentle Motion® and Shaka®. Oscillating agitation is an even newer possible retort motion. This research experiment was designed to (1) determine the effects of oscillating continuously and oscillating-dwell time on the rate of heat penetration in a …

Adaptive Parallelism For Coupled, Multithreaded Message-Passing Programs, Samuel K. Gutiérrez

Computer Science ETDs

Hybrid parallel programming models that combine message passing (MP) and shared- memory multithreading (MT) are becoming more popular, especially with applications requiring higher degrees of parallelism and scalability. Consequently, coupled parallel programs, those built via the integration of independently developed and optimized software libraries linked into a single application, increasingly comprise message-passing libraries with differing preferred degrees of threading, resulting in thread-level heterogeneity. Retroactively matching threading levels between independently developed and maintained libraries is difficult, and the challenge is exacerbated because contemporary middleware services provide only static scheduling policies over entire program executions, necessitating suboptimal, over-subscribed or under-subscribed, configurations. In …

Establishing Benchmark Criteria For Single Chromosome Bacterial Genome Assembly, Timothy J. Krause

School of Biological Sciences: Dissertations, Theses, and Student Research

Adequate recommendations for the amount and types of sequencing data necessary to optimize the recovery of single chromosomes from bacterial sequencing projects do not exist. Broad estimates for coverage depths needed to recover complete bacterial genomes are present in the literature, but required sequencing depths across bacterial and archaeal phylogenies needed for high-quality assembly are not known. Additionally, correlations between genomic complexity and expected quality of assembly have not been properly defined. Furthermore, the capabilities of multiplexing (sequencing more than one sample simultaneously on one flow cell) with long-read sequencing platforms in order to recover complete bacterial chromosomes are poorly …

Enhanced Mean Ratio Estimators Of Auxiliary Variables Based On The Linear Mixture Of Variances, Damisa A. Saddam, Jamila Abdullahi, Umar Nura

CBN Journal of Applied Statistics (JAS)

This paper incorporates the variance of auxiliary variables to propose three improved ratio estimators of population mean. To enhance the efficiency of the proposed ratio estimators, a linear combination of the population coefficient of variation, kurtosis, skewness and the population variance of the auxiliary variable is harnessed. The properties relating to the suggested estimators are assessed using constant, bias and mean square error. We also provided practical study for illustration and corroboration using a population data consisting of the fixed capital, which is the supporting variable and output of 80 factories which are the study variables. The suggested improved ratio …

Policy Trilemma And Interest Rate Behaviour In Nigeria, Korede Ajogbeje, Oluwatosin Adeniyi, Festus O. Egwaikhide

CBN Journal of Applied Statistics (JAS)

Policy makers face trade-off in dealing with exchange rate management, monetary independence and concerns about capital mobility simultaneously. This study empirically examines the effects of Nigeria’s trilemma policy path on interest rate using data spanning from 1997:Q1 to 2017:Q3. It equally incorporates the role of external reserves in buffering these effects. Stationarity of the series were ascertained with Zivot-Andrew (ZA) structural break unit roots test technique, while the bounds test cointegration approach was used to confirm the cointegrating properties of the variables. We found that capital mobility has significant effect on interest rate in the long run baseline model and …

A Predictive Model For Inflation In Nigeria, Nse S. Udoh, Anietie S. Isaiah

CBN Journal of Applied Statistics (JAS)

The study estimates a dynamic model using quarterly data spanning 1995 to 2016. Four dynamic models: level lagged variables, differenced lagged variables, log-transformed lagged variables and differenced log-transformed lagged variables were considered. The best predictive model was selected based on the Schwarz Information Criterion (SIC) value. From the empirical results, the level form models performed better than the differenced form models. On the basis of model parsimony, the level lagged model was the preferred model among the set of selected models. Predictions obtained from the model indicate that the model is stable as actual interest rate (IR) values, fall well …

Assessing Efficiency In The Pharmaceutical Sector Of Nigeria, Efayena O. Obukohwo, Enoh H. Olele, Patricia N. Buzugbe

CBN Journal of Applied Statistics (JAS)

The study analyses, empirically, the efficiency of the Pharmaceutical sector in Nigeria. Employing a balanced panel of 20 pharmaceutical firms between 2012 and 2016, the paper uses a non-parametric technique (Data Envelopment Analysis) to analyze the firms’ efficiency under the constant returns to scale (CRS) and variable returns to scale (VRS) assumptions. The results obtained shows inefficiency in the pharmaceutical sector as it operates under a decreasing return to scale. This calls for an appropriate policy mix to stimulate the efficiency of the pharmaceutical sector in Nigeria by enhancing research and development (R&D) as ell as regulations within the sector.

Multi-Label Classification Using Higher-Order Label Clusters, Dilanga Lakshitha Bandara Abeyrathna Galapita Mudiyanselage

Student Work

Multi-label classification (MLC) is one of the major classification approaches in the context of data mining where each instance in the dataset is annotated with a set of labels. The nature of multiple labels associated with one instance often demands higher computational power compared to conventional single-label classification tasks. A multi-label classification is often simplified by decomposing the task into single-label classification which ignores correlations among labels. Incorporating label correlations into classification task can be hard since correlations may be missing, or may exist among a pair or a large subset of labels. In this study, a novel MLC approach …

Review: North American Ducks, Geese & Swans: Identification Guide. Frank S. Todd., Kevin M. Ringelman

The Prairie Naturalist

The North American Duck, Geese & Swans: Identification Guide, released in 2018, is the culmination of a lifetime of waterfowl photography by the late Frank Todd. Indeed, this book stands apart from other identification guides as being entirely photo-driven, with minimal introductory material, notations of field marks, or descriptions of the various waterfowl species. It is small enough to be carried in the field (6.5” × 9” × 0.5”), but most readers will find it less useful than a standard bird identification book (Sibley 2014), even for waterfowl. As the title suggests, the Todd guide focuses on North American species, …

Preparing An Effective Poster Presentation, Christopher N. Jacques

The Prairie Naturalist

Greetings GPNSS members! By the time you read this editorial, many of have been experiencing the fury unleashed by ‘Old Man Winter’ and may find yourself counting the days until warmer spring temperatures return once again to the Great Plains. Until then, just a couple more months of bitter cold temperatures, strong winds, and blowing and drifting snow. But not to worry, winter also provides the cold weather enthusiasts among us a chance to enjoy a range of outdoor recreational opportunities, a chance to reflect on the previous year in review, exciting professional and personal opportunities ushered in by the …

Comparison Of Northern Flying And Red Squirrel Phylogenies With Focus On The Insular United States, Alyssa M. Kiesow, Hugh B. Britten

The Prairie Naturalist

Northern flying squirrel (Glaucomys sabrinus) and red squirrel (Tamiasciurus hudsonicus) populations are endemic to northern North America, including the Black Hills. The Black Hills populations are considered disjunct from other populations within their range. We examined insular populations to determine whether arboreal squirrels in the Black Hills each represent a unique population. We trapped and collected ear samples from northern flying and red squirrels in the Black Hills and in areas of Montana, Wyoming, Idaho, Utah, Minnesota, and Wisconsin to infer population phylogenies with special consideration of the Black Hills population. Microsatellite loci and two mtDNA sequences were used for …

Notes: Two-Headed White-Tailed Deer Fetus, William F. Jensen, Daniel M. Grove, Ryan J. Herigstad, William J. Haase

The Prairie Naturalist

On 6 April 2018 a female white-tailed deer (Odocoileus virginianus dakotensis) was hit and killed by a vehicle along HWY 1806 in rural Morton County, North Dakota, USA (N46o 38.617; W100o 42.901). Based upon dental eruption and wear (Severinghaus 1949), the female was estimated to be a >4.5 years-of-age. A male fetus with parapagus diprosopus (i.e., shared face) apparently was expelled from the adult female, and a domestic canine (Canis lupus familiaris) carried the fetus to a private residence. The resident contacted the North Dakota Game and Fish Department (NDGFD) to turn in the fetus. On 10 April 2018, NDGFD …