Digital Commons Network^™

Quantity And Quality Limit Detritivore Growth: Mechanisms Revealed By Ecological Stoichiometry And Co-Limitation Theory, Halvor M. Halvorson, Erik Sperfeld, Michelle A. Evans-White

Faculty Publications

Resource quantity and quality are fundamental bottom-up constraints on consumers. Best understood in autotroph-based systems, co-occurrence of these constraints may be common but remains poorly studied in detrital-based systems. Here, we used a laboratory growth experiment to test limitation of the detritivorous caddisfly larvae Pycnopsyche lepida across a concurrent gradient of oak litter quantity (food supply) and quality (phosphorus : carbon [P:C ratios]). Growth increased simultaneously with quantity and quality, indicating co-limitation across the resource gradients. We merged approaches of ecological stoichiometry and co-limitation theory, showing how co-limitation reflected shifts in C and P acquisition throughout homeostatic regulation. Increased growth …

Additive Manufacturing Techniques And Their Biomedical Applications, Yujing Liu, Wei Wang, Laichang Zhang

Research outputs 2014 to 2021

Additive manufacturing (AM), also known as three-dimensional (3D) printing, is gaining increasing attention in medical fields, especially in dental and implant areas. Because AM technologies have many advantages in comparison with traditional technologies, such as the ability to manufacture patient-specific complex components, high material utilization, support of tissue growth, and a unique customized service for individual patients, AM is considered to have a large potential market in medical fields. This brief review presents the recent progress of 3D-printed ­biomedical materials for bone applications, mainly for metallic materials, including multifunctional alloys with high strength and low Young’s modulus, shape memory alloys, …

The Cost Of Roaming Free: Assessing The Effects Of Plant Secondary Metabolites On Diet Selection And Nutritional Condition In A Free-Ranging Generalist Herbivore, Daniel Patrick Melody

Boise State University Theses and Dissertations

Large vertebrate herbivores have a wide variety of browsing options available. However, most plants contain a suite of plant secondary metabolites (PSMs) that can have toxic effects when ingested. Herbivores must therefore make dietary choices that minimize the potentially harmful effects of PSM ingestion and maximize the use of available nutrients and protein. During winter months, in northern latitudes, climatological factors restrict browsing options and many populations of herbivores must subsist primarily on forage that is relatively poor in nutritional quality and high in PSMs. Many species of herbivores have developed a suite of behavioral and physiological adaptations to cope …

A Spiritual Framework Of Organic Oneness: The Eco-Theological Shift Towards A Collective Ecological Consciousness, Kjirsten Francisco José Durand

Electronic Theses and Dissertations

Earth’s environment has been undergoing unprecedented rates of degradation during the Anthropocene paradigm. Current projections for the near future show climate change producing grim outcomes for most habitable parts of the world. This thesis defends the argument that in order to adequately address the state of the environment, humanity must experience a shift in collective consciousness away from the current philosophical paradigm, and instead adopt a paradigm that enables a common mindset regarding the place of humans within the natural environment. Various forms of spiritual ecology are explored: deep ecology, biblical eco-theology, and eco-feminist theology. These positions are explored in …

The Physicochemical Properties And Cellular Toxicity Of Variably Synthesized Zinc Oxide Nanoparticles, Catherine Binns Anders

Boise State University Theses and Dissertations

Nanotechnology has grown exponentially since its inception in the early 1970’s. Since then, bionanotechnological devices and treatment options have significantly improved disease treatments and patient outcomes; however, this rapid growth in consumer related products has also prompted concern. Zinc oxide nanoparticles (nZnO), known for their inherent toxicity and prevalent global use in consumer products and medical applications, have received much of this attention. Significant research efforts have focused on both toxicity remediation through material property modification and the exploitation of these same factors to create potential cancer therapeutics. There is general agreement that the physicochemical properties of nZnO strongly contribute …

Harmonizing Lipidomics: Nist Interlaboratory Comparison Exercise For Lipidomics Using Srm 1950-Metabolites In Frozen Human Plasma, J Bowden, C Ulmer, C Jones, J Koelmel, L Abdullah, Houli Jiang, Michal Schwartzman, Amaury Cazenave-Gassiot, Antonio Checa, Michelle Cinel, Romain Colas, Serge Cremers, Edward Dennis, James Evans, Alexander Fauland, Jun Han, Houli Jiang, Michal Schwartzman

NYMC Faculty Publications

As the lipidomics field continues to advance, self-evaluation within the community is critical. Here, we performed an interlaboratory comparison exercise for lipidomics using Standard Reference Material (SRM) 1950-Metabolites in Frozen Human Plasma, a commercially available reference material. The interlaboratory study comprised 31 diverse laboratories, with each laboratory using a different lipidomics workflow. A total of 1,527 unique lipids were measured across all laboratories and consensus location estimates and associated uncertainties were determined for 339 of these lipids measured at the sum composition level by five or more participating laboratories. These evaluated lipids detected in SRM 1950 serve as community-wide benchmarks …

A Hybrid Parallel Approach To High-Performance Compression Of Big Genomic Files And In Compresso Data Processing, Sandino N. Vargas Pérez

Dissertations

Due to the rapid development of high-throughput low cost Next-Generation Sequencing, genomic file transmission and storage is now one of the many Big Data challenges in computer science. Highly specialized compression techniques have been devised to tackle this issue, but sequential data compression has become increasingly inefficient and existing parallel algorithms suffer from poor scalability. Even the best available solutions can take hours to compress gigabytes of data, making the use of these techniques for large-scale genomics prohibitively expensive in terms of time and space complexity.

This dissertation responds to the aforementioned problem by presenting a novel hybrid parallel approach …

A Deep Learníng-Based Data Minimization Algorithm For Big Genomics Data In Support Of Lot And Secure Smart Health Services, Mohammed Aledhari

Dissertations

In the age of Big Genomics Data, institutes such as the National Human Genome Research Institute (NHGRI),1000-Genomes project, and the international cancer sequencing consortium are faced with the challenge of sharing large volumes of data between internationallydispersed sample collectors, data analyzers, and researchers, a process that up until now has been plagued by unreliable transfers and slow connection speeds. These occur due to the inherent throughput bottlenecks of traditional transfer technologies. One suggested solution is using the cloud as an infrastructure to solve the store and analysis challenges. However, the transfer and share of the genomics datasets between biological laboratories …

The Effect Of Preflood Nitrogen And Flood Establishment Timing On Rice Development, Nitrogen Uptake And Grain Yield, Tyler Richmond

Graduate Theses and Dissertations

Urea-N fertilizer is typically applied at the 5-leaf stage to rice (Oryza sativa L.) grown in a dry-seeded, delayed-flood production system. How long the preflood-N can be delayed without adverse effects on yield potential is poorly understood. The research objective was to determine the effects of preflood-N application and flood establishment timing on aboveground-N content, 50% heading, yield components, and grain yield. Trials were established on silt loam soils at the Pine Tree Research Station (PTRS) and Rice Research and Extension Center (RREC) during 2015 and 2016. Urea-N was applied at 0, 45, 90, 135, and 180 kg N ha-1 …

Habitat Ecology, Trophic Interactions, And Distribution Of Endangered Himalayan Musk Deer In The Nepal Himalaya, Kapil Kishor Khadka

Graduate Theses and Dissertations

This dissertation seeks to explore and assess the habitat selection, trophic interactions and distribution of Himalayan musk deer. Chapter one deals with seasonal diet analysis of musk deer along with the overlap in consumption with livestock during summer. Microhistological technique was employed to assess dietary consumption. Results showed that Abies spectabilis, Pinus wallichiana, and Berberis species constituted the major portion of musk deer’s diet. Dietary breadth measured by the Shannon index was found higher in winter compared to summer. Although musk deer and livestock shared a considerable number of plant species in their diets, the consumption however was significantly different …

Heritable Sperm Chromatin Epigenetics: A Break To Remember, Ralph G. Meyer, Chelsea C. Ketchum, Mirella L. Meyer-Ficca

UAES Publications

Sperm chromatin not only has a unique structure to condense and protect the paternal DNA in transit, but also provides epigenetic information that supports embryonic development. Most of the unique sperm nuclear architecture is formed during the sweeping postmeiotic chromatin remodeling events in spermiogenesis, where the majority of nucleosomes are removed and replaced by protamines. The remaining histones and other chromatin proteins are located in structurally and transcriptionally relevant positions in the genome and carry diverse post-translational modifications relevant to the control of embryonic gene expression. How such postmeiotic chromatin-based programming of sperm epigenetic information proceeds, and how susceptible the …

Toxicity And Mitochondrial Delivery Of Flavonol-Based Carbon Monoxide-Releasing Molecules, Hector Jose Esquer Heredia

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Despite the reputation of carbon monoxide (CO) as a silent killer, new evidence suggests that this gaseous molecule has anti-inflammatory, anti-cancer and vasoprotective properties. Unfortunately, little is known about the role of CO in the body. However, proteins present in mitochondria are believed to be important targets. We previously synthesized a class of novel and structurally modifiable flavonol-based CO-releasing molecules (CORMs). Flavonols are commonly found in fruits and vegetables. The base structure, Flav-1, is fluorescent, exhibits low toxicity, and releases CO after exposure to visible light. Previous reports indicate that addition of a triphenylphosphonium (TPP) tail allows chemical structures to …

Development Of An Animal Model For Enterovirus For Evaluation D68 For Screening Of Antiviral Therapies, W. Joseph Evans

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Enterovirus D68 (EV-D68) virus has become more prevalent over the last 15 to 20 years. EV-D68 attacks the respiratory system and can cause severe disease in individuals who have underlying respiratory problems. There have also been reports of individuals with EV-D68 showing signs of neurological system problems and acute flaccid paralysis. Because of the increase in patients with EV-D68 and also the potential for neurological disease, an animal model is needed to study the disease and to evaluate experimental therapies for EV-D68 infection.

To develop the animal model, 4-week old AG129 mice that lack alpha and beta interferon receptors, making …

Development Of A Cholera Toxin Cta2/B Based Staphylococcus Aureus Vaccine To Prevent Bovine Mastitis, Neha Misra

Boise State University Theses and Dissertations

Staphylococcus aureus is an important pathogen causing chronic and invasive disease worldwide. This bacterium is a leading cause of community and hospital acquired infections in humans, and is also known to infect wild and domestic animals. Bovine mastitis, or inflammation of the udder, is one of the most economically relevant diseases of the dairy industry, with a high incidence worldwide. S. aureus is a major etiological agent causing this disease. S. aureus mastitis is highly contagious and difficult or impossible to treat. Management practices at dairy farms, that include good sanitation and antibiotic use, have been partially successful in reducing …

The Relative Importance Of Fire History, Management Treatments, Biotic, And Abiotic Factors On The Abundance Of Key Vegetative Components In An Endangered Sagebrush-Steppe Ecosystem, Ann Marie Raymondi

Boise State University Theses and Dissertations

Dryland ecosystems are globally distributed and occupy nearly half of Earth’s terrestrial surface. Drylands are particularly vulnerable to degradation and their restoration has become a global concern. Sagebrush-steppe ecosystems in the intermountain western United States have been subject to decades of active management efforts to address invasive species and restore plant communities, and can serve as a relevant case study to investigate dynamics between fire, invasive species, and management treatments in a representative dryland system. My objective was to determine the relative importance of fire history, management treatment history, abiotic, and biotic factors in relation to the abundance of key …

Development Of In-Vitro And In-Vivo Devices To Study The Mechanobiology Of Ligament Healing, John Bayard Everingham

Boise State University Theses and Dissertations

Ligament injuries are the most common sports injury in the United States. The current clinical practice for treating ligament injuries leaves many patients with significant pain and joint laxity for years following the initial injury. Controlled mechanical stimulation of the tissue after injury is necessary for robust healing, but the optimal mechanical environment for ligament healing is not fully understood. Alternative therapies, such as instrument assisted soft tissue mobilization (IASTM), offer a form of mechanical stimulation that is non-invasive and has shown promising clinical outcomes but the optimal dosage for IASTM treatments is unknown. The objective of this study was …

Research-Based Stem Educator Professional Development Rubrics For The Selection Of High-Quality Professional Development: A Mixed Methods Study Of Teacher Perceptions And Outcomes, Angela Hemingway

Boise State University Theses and Dissertations

Idahoans failed to recognize approximately $240M in 2016 when over 3,800 STEM (science, technology, engineering, and math) jobs, with a median wage of $30 per hour, went unfilled. This further caused Idaho to lose $14M in state income tax receipts from these unclaimed positions (Idaho Department of Labor, 2016). To mitigate these economic losses, the Idaho STEM Action Center (STEM AC) was created to develop the STEM-skilled workforce that Idaho employers demand. High-quality, STEM-educator professional development (PD) is a critical component in ensuring students are equipped with the skills required to successfully thrive in the workforce and fill industry demands. …

The Use Of Visual Arts In World Language Instruction To Increase Student Motivation And Attitude, Marilena Bevilacqua Martello

Boise State University Theses and Dissertations

Because of the complexity and changeability that characterize languages, language learners face a number of various factors in their quest to acquire a new language. Nevertheless, it is the level of motivation and personal attitude toward language learning that will determine their rate of success (Dörnyei & Csizér, 1998). The purpose of this study was to find out (1) whether there was a relationship between the use of visual art in world language instruction and student motivation, and (2) whether student writing skills improved when visual art was used for Content Based Instruction. The study used a mixed method research …

Oral Creatine Hydrochloride Supplementation: Acute Effects On Submaximal, Intermittent Bouts Of Bench Press And Vertical Jump Exercises, Daniel Mcdonough

Boise State University Theses and Dissertations

The purpose of this study was to examine the acute effects of oral creatine hydrochloride (CrHCl) supplementation on three repeated bouts of bench press and vertical jumping exercises and body composition measures (body weight (BW), fat-free mass (FFM) and fat mass (FM)). Methods: Fifteen resistance trained males completed 3 sets of the barbell bench press (70% 1RM) and 3 sets of the repeated counter-movement vertical jump (CMJ; 85% maximal CMJ height), with 2 min rest between sets, before and after a 7 d CrHCl intervention (4 g·day^-1). A two-factor repeated measures ANOVA was used to determine significant main …

Impacts Of Anthropogenic Noise On Litter Chemistry And Decomposition Processes In A Semi-Arid Ecosystem, Peggy Martinez

Boise State University Theses and Dissertations

Chronic anthropogenic noise in ecosystems can change avian/arthropod/plant interactions, but it is unclear how changes in herbivory pressure affects functional traits of plants. We asked how anthropogenic noise, mediated through changes in arthropod abundance, altered timing of leaf senesce, chemical composition (i.e. C/N ratios, total phenolics) and decomposition rates of leaf litter in Wyoming big sagebrush (Artemisia tridentata spp. wyo.). Additionally, we asked if changes in arthropod abundance altered secondary metabolites (i.e. monoterpenes) in foliage. We broadcasted recorded gas compressor station noise (24hrs/day) from April through October 2015 in a sagebrush steppe ecosystem of Idaho, USA. We quantified …

Gvsu Honors College: A More Distinctive Experience, Alexis Ellis, Darius Youngblood, Lynn Doherty, Marissa Kahnt, Pierce Henderson,, Taylor Kooy

Liberal Studies Undergraduate Research

In the later summer of 2017, our team was assembled from six individuals in the HNR 313 Design Thinking class at Grand Valley State University. In time, we would learn each other’s names, personalities, assign roles for the task ahead, and come to share life experiences. Alexis Ellis became our team writing lead, Darius Youngblood became the team leader, Lynn Doherty volunteered to be the scribe and recorder, Marisa Kahnt became a co-reporter and manager of human resources, Pierce Henderson became co-reporter and researcher, and Taylor Kooy became co-presenter and task manager.

With our team finalized, we were able to …

To Group Or Not To Group? Good Practice For Housing Male Laboratory Mice, S Kappel, P Hawkins, M Mendl

School of Biological and Marine Sciences

It is widely recommended to group-house male laboratory mice because they are ‘social animals’, but male mice do not naturally share territories and aggression can be a serious welfare problem. Even without aggression, not all animals within a group will be in a state of positive welfare. Rather, many male mice may be negatively affected by the stress of repeated social defeat and subordination, raising concerns about welfare and also research validity. However, individual housing may not be an appropriate solution, given the welfare implications associated with no social contact. An essential question is whether it is in the best …

Pelagic Habitat: Exploring The Concept Of Good Environmental Status, Mark Dickey-Collas, Abigail Mcquatters-Gollop, Eileen Bresnan, Alexandra C. Kraberg, John P. Manderson, Richard D.M. Nash, Saskia A. Otto, Anne F. Sell, Jacqueline F. Tweddle, Verena M. Trenkel

School of Biological and Marine Sciences

Marine environmental legislation is increasingly expressing a need to consider the quality of pelagic habitats. This paper uses the European Union marine strategy framework to explore the concept of good environmental status (GES) of pelagic habitat with the aim to build a wider understanding of the issue. Pelagic ecosystems have static, persistent and ephemeral features, with manageable human activities primarily impacting the persistent features. The paper explores defining the meaning of "good", setting boundaries to assess pelagic habitat and the challenges of considering habitat biodiversity in a moving medium. It concludes that for pelagic habitats to be in GES and …

Urban Bobcat (Lynx Rufus) Ecology In The Dallas-Fort Worth, Texas Metroplex, Julie M. Golla

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Urban landscapes are quickly replacing native habitat around the world. As wildlife and people increasingly overlap in their shared space and resources, so does the potential for human-wildlife conflict, especially with predators. Bobcats (Lynx rufus) are a top predator in several urban areas across the United States and a potential contributor to human-carnivore conflicts. This study evaluated the movements and habitat use of bobcats in the Dallas-Fort Worth (DFW), Texas metroplex. Spatial data were collected from 10 bobcats via Global Positioning Satellite (GPS) for approximately one year. Average home range size was 4.60 km² (n=9, SE=0.99 km …

Rancher Perceptions Of Ecosystem Services From Rangelands Of The Intermountain West, Elisabeth C. York

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Rangelands within the Great Basin are responsible for the provision of multiple resources that humans depend on for a variety of reasons. Ranchers in this region are dependent on public lands to remain economically viable in their cattle operations. As a majority of land in this region is publically owned, there are varying interests at play in what should and could be the focus of management. Ranchers are charged with implementing strategies aimed at conserving these landscapes and their motivations for what to manage may significantly influence resource provision from Intermountain West ecosystem.

In this study, I sought to understand …

Optimizing Barrier Removal To Restore Connectivity In Utah’S Weber Basin, Maggi Kraft

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

River barriers, such as dams, culverts and diversions are important for water conveyance, but disrupt river ecosystems and hydrologic processes. River barrier removal is increasingly used to restore and improve river habitat and connectivity. Most past barrier removal projects prioritized individual barriers using score-and-rank techniques, neglecting the spatial structure and cumulative change from multiple barrier removals. Similarly, most water demand models satisfy human water uses or, only prioritize aquatic habitat, failing to include both human and environmental water use benefits. In this study, a dual objective optimization model identified in-stream barriers that impede quality-weighted aquatic habitat connectivity for Bonneville cutthroat …

Twentieth Century Channel Change Of The Green River In Canyonlands National Park, Utah, Alexander E. Walker

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Since the early 20^th century, river channels of the Colorado River basin have narrowed, decreasing available riparian and aquatic habitat. Changes are considered to be the result of three major factors: wide-spread water development, increasing hydroclimate variability and the invasion of non-native tamarisk (Tamarix spp.), altering flow regime and sediment supply. Different studies have reached different conclusions about the relative roles of flow regime, sediment supply and tamarisk in causing narrowing.

I investigated channel change in the lower Green River within Canyonlands National Park to describe channel changes in the 20^th century and understand the roles …

Landscape Architecture Education: A Study Of Patterns, Tanya Rice

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This research is focused on analyzing landscape architecture education of accredited bachelor programs in the U.S. The primary intent was to obtain a comprehensive understanding of the current state of landscape architecture education and the direction in which it is heading. This was conducted through an evaluation of each landscape architecture program’s course offerings. The objectives were to explore the degree of coherence and dispersion of course requirements among programs, compare similarities and differences and identify current patterns, trends, strengths and emphases of the programs. Then design course descriptions were analyzed for identification of word families and cluster networks to …

Behavior Of Copper Oxide Nanoparticles In Soil Pore Waters As Influenced By Soil Characteristics, Bacteria, And Wheat Roots, Joshua Hortin

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The goal of this project was to study the behavior of copper oxide nanoparticles in soil environments. Copper oxide nanoparticles have antimicrobial properties and may also be used in agricultural settings to provide a source of copper for plant health, but accidental or misapplication of these nanoparticles to soil may be damaging to the plant and its associated bacteria.

Dissolved soil organic matter that is present in soil pore waters dissolved nanoparticles, but did not dissolve the expected amounts from a geochemical model because the geochemical model did not take into account surface chemistry or coating of the nanoparticles by …

Exploring And Describing The Spatial And Temporal Dynamics Of Medusahead In The Channeled Scablands Of Eastern Washington Using Remote Sensing Techniques, Timothy M. Bateman

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Medusahead is a harmful weed that is invading public lands in the West. The invasion is a serious concern to the public because it can reduce forage for livestock and wildlife, increase fire frequency, alter important ecosystem cycles (like water), reduce recreational activities, and produce landscapes that are aesthetically unpleasing. Invasions can drive up costs that generally require taxpayer’s dollars. Medusahead seedlings typically spread to new areas by attaching itself to passing objects (e.g. vehicles, animals, clothing) where it can quickly begin to affect plants communities. To be effective, management plans need to be sustainable, informed, and considerate to invasion …