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2014

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Development Of An Improved Rna Interference Vector System For Agrobacterium-Mediated Plant Transformation, Umut Toprak, Cathy Coutu, Doug Baldwin, Martin Erlandson, Dwayne Hegedus Jan 2014

Development Of An Improved Rna Interference Vector System For Agrobacterium-Mediated Plant Transformation, Umut Toprak, Cathy Coutu, Doug Baldwin, Martin Erlandson, Dwayne Hegedus

Turkish Journal of Biology

Plant-mediated RNA interference (RNAi) has shown a great potential in pest control and requires i) subcloning of sense/antisense regions in compatible vectors, ii) transfer of the silencing cassette into a binary vector, iii) transformation of Agrobacterium tumefaciens with desired binary plasmids, and iv) transformation of plants with Agrobacterium. The procedure is long and should ensure plasmid backbone stability; however, plasmid recombination due to antibiotic selection is a common problem. pGSA1252 is an RNAi silencing binary vector allowing direct cloning of hairpin structure; however, it possesses a chloramphenicol selection marker leading to plasmid recombination in various Agrobacterium strains. To solve this …

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The Genus Crocus, Series Crocus (Iridaceae) In Turkey And 2 East Aegean Islands: A Genetic Approach, Osman Erol, Hi̇lal Betül Kaya, Levent Şik, Meti̇n Tuna, Levent Can, Muhammed Bahatti̇n Tanyolaç Jan 2014

The Genus Crocus, Series Crocus (Iridaceae) In Turkey And 2 East Aegean Islands: A Genetic Approach, Osman Erol, Hi̇lal Betül Kaya, Levent Şik, Meti̇n Tuna, Levent Can, Muhammed Bahatti̇n Tanyolaç

Turkish Journal of Biology

In this study, a total of 26 Crocus specimens from different locations across Turkey and 2 East Aegean islands (Chios and Samos) were analyzed using 12 amplified fragment length polymorphism (AFLP) primer combinations to obtain information on genetic diversity, population structure, and genetic relationships. A total of 369 polymorphic AFLP bands were generated and scored as binary data. Genetic similarities were determined. Cluster analysis revealed 4 major groups among the 26 genotypes examined in this study. The nuclear DNA contents (2C) of the 26 Crocus specimens were found to range from 5.08 pg in C. asumaniae to 9.75 pg in …

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A Simple Guanidinium Isothiocyanate Method For Bacterial Genomic Dna Isolation, Erkan Mozi̇oğlu, Müslüm Akgöz, Candan Tamerler, Zühtü Tanil Kocagöz Jan 2014

A Simple Guanidinium Isothiocyanate Method For Bacterial Genomic Dna Isolation, Erkan Mozi̇oğlu, Müslüm Akgöz, Candan Tamerler, Zühtü Tanil Kocagöz

Turkish Journal of Biology

A high-quality and low-cost genomic DNA isolation method is needed for use in microbiology laboratories. In this study, we developed a new modified guanidinium isothiocyanate method to isolate DNA from Escherichia coli, Salmonella enterica subsp. enterica serotype Typhimurium, and Staphylococcus aureus and compared it with 4 other DNA isolation methods. The results show that the modified guanidinium isothiocyanate method developed in our laboratory is simple, fast, and inexpensive and yields DNA whose quality and quantity are similar to that of 2 commercial extraction kits but far better than 2 conventional DNA extraction methods used for comparison.

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Defense Enzyme Activities And Biochemical Variations Of Pelargonium Zonale In Response To Nanosilver Application And Dark Storage, Mehrnaz Hatami, Mansour Ghorbanpour Jan 2014

Defense Enzyme Activities And Biochemical Variations Of Pelargonium Zonale In Response To Nanosilver Application And Dark Storage, Mehrnaz Hatami, Mansour Ghorbanpour

Turkish Journal of Biology

Pelargonium petal abscission and ethylene-induced leaf senescence are major problems that reduce the longevity of plants. This study was carried out to determine the poststorage influence of nanosilver (NS) particle (0, 20, 40, 60, and 80 mg L^{-1}) application during dark storage period on chlorophyll and carotenoid pigments, malondialdehyde (MDA) content, leaf protein and ethylene concentration, petal abscission, membrane stability index (MSI), and enzyme activity including ascorbate peroxidase (APX), peroxidase (POD), superoxide dismutase (SOD), catalase (CAT), and \BETA-glucosidase (\BETA-GLU) in two Pelargonium pot plants of the cultivars Flowerfairy and Foxi. Enhanced photosynthetic pigment contents were recorded in leaves of both …

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Comprehensive Analysis Of Beta-Galactosidase Protein In Plants Based On Arabidopsis Thaliana, Samin Seddigh, Maryam Darabi Jan 2014

Comprehensive Analysis Of Beta-Galactosidase Protein In Plants Based On Arabidopsis Thaliana, Samin Seddigh, Maryam Darabi

Turkish Journal of Biology

Beta-galactosidases (\BETAgals) (EC 3.2.1.23) have been detected in a wide range of plant organs and tissues and are described by their ability to hydrolyze terminal nonreducing \BETA-D-galactosyl residues from \BETA-D-galactosides. In this study, 92 \BETAgal protein sequences from different plants, 7 animal samples including human and mouse, 3 samples from bacteria including Escherichia coli, and 4 samples from insects including Drosophila melanogaster were aligned. Sequences were analyzed by computational tools to predict the protein properties, such as molecular mass, isoelectric point, signal peptide, motifs, transmembrane domain, and secondary and spatial structure. Protein structure analysis revealed there is a high identity …

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Improvement In Tolerance To Salt Stress During Tomato Cultivation, Mustafa Demi̇rkaya Jan 2014

Improvement In Tolerance To Salt Stress During Tomato Cultivation, Mustafa Demi̇rkaya

Turkish Journal of Biology

This study was conducted to evaluate the physiological impact of seed priming on improving the salt tolerance of tomato cultivars H-2274 and Rio Grande. Tomato seeds were primed with 5 M NaCl solution at 20 °C for 3 days in a dark environment. The seeds of the control treatments were handled in a similar way, using tap water instead of NaCl solution. After the priming procedure, seeds were washed and sown in standard germination trays. From each treatment group, 21 homogeneous seedlings were transplanted into 10-L pots full of turf for subsequent salinity experiments. In order to avoid osmotic shock, …

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Transgenic Nicotiana Tabacum Cultivar Samsun Plants Carrying The Wild Sugar Beet Hs1pro1 Gene Have Resistance To Root-Knot Nematodes, Çağla Sönmez, İbrahi̇m Hali̇l Elekci̇oğlu, Ayşe Meral Yücel, Hüseyi̇n Avni̇ Öktem Jan 2014

Transgenic Nicotiana Tabacum Cultivar Samsun Plants Carrying The Wild Sugar Beet Hs1pro1 Gene Have Resistance To Root-Knot Nematodes, Çağla Sönmez, İbrahi̇m Hali̇l Elekci̇oğlu, Ayşe Meral Yücel, Hüseyi̇n Avni̇ Öktem

Turkish Journal of Biology

Nematodes are the principal animal parasites of plants, causing annual crop losses of more than US$100 billion worldwide. Conventional control measures against nematode infection include toxic nematicide application to soil, crop rotation practices, and classical breeding approaches. However, due to the limitations of each technique, biotechnology presents itself as an effective alternative in nematode control. To date, several resistance genes against nematodes have been cloned. One such gene, Hs1^{pro1}, cloned from wild sugar beet, Beta procumbens, shows resistance to the cyst nematode Heterodera schachtii. Recent studies showed that Hs1^{pro1} has a broad target pathogen range. In this study, we transformed …

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In Vitro Cytotoxic, Genotoxic, And Oxidative Effects Of Acyclic Sesquiterpene Farnesene, Kübra Çeli̇k, Başak Toğar, Hasan Türkez, Numan Taşpinar Jan 2014

In Vitro Cytotoxic, Genotoxic, And Oxidative Effects Of Acyclic Sesquiterpene Farnesene, Kübra Çeli̇k, Başak Toğar, Hasan Türkez, Numan Taşpinar

Turkish Journal of Biology

Farnesene (FNS) is an acyclic sesquiterpene. It has a wide range of important biological effects such as antioxidant, antimicrobial, and antifungal properties, although its cytotoxic, cytogenetic, and oxidative effects have not been investigated in human blood tissue yet. To this aim, both MTT and lactate dehydrogenase (LDH) assays were carried out to evaluate cell viability and cytotoxicity. Total antioxidant capacity (TAC) and total oxidative stress (TOS) parameters were used to assess oxidative alterations. In addition, micronucleus and chromosomal aberration tests were used for mutagenic and genotoxic studies. The results revealed that FNS reduced cell viability at concentrations of higher than …

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A Preliminary Proteomic Evaluation Of Smooth Muscle Cells In Thoracic Aortic Aneurysms, Ceyda Açilan Ayhan, Betül Baykal, Müge Serhatli, Ömer Kaçar, Zelal Adigüzel, Serpi̇l Taş, Kemal Baysal, Ahmet Tarik Baykal Jan 2014

A Preliminary Proteomic Evaluation Of Smooth Muscle Cells In Thoracic Aortic Aneurysms, Ceyda Açilan Ayhan, Betül Baykal, Müge Serhatli, Ömer Kaçar, Zelal Adigüzel, Serpi̇l Taş, Kemal Baysal, Ahmet Tarik Baykal

Turkish Journal of Biology

Aortic aneurysm is characterized as localized degeneration of the aorta leading to advanced weakening and widening of the vessel. While the exact mechanisms have yet to be determined, current studies indicate that the degradation of extracellular matrix (ECM) proteins and apoptosis of vascular smooth muscle cells (SMCs) may result in extendibility, dilation, and rupture of the vessel. Within the aortic wall, SMCs are implicated as key components involved in disease development, as numerous molecular changes have been reported to occur. Most current studies involve either investigation of proteins constituting a group or pathway in SMCs, or analyses of the whole …

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Production Of Biosurfactant By Pseudomonas Spp. Isolated From Industrial Waste In Turkey, Tayfun Kaya, Belma Aslim, Ergi̇n Kari̇ptaş Jan 2014

Production Of Biosurfactant By Pseudomonas Spp. Isolated From Industrial Waste In Turkey, Tayfun Kaya, Belma Aslim, Ergi̇n Kari̇ptaş

Turkish Journal of Biology

In this study, 26 Pseudomonas spp. were isolated from a stream polluted by factory waste and from petroleum-contaminated soil. The surface tension (ST) of the cultures was used as a criterion for the primary isolation of biosurfactant-producing bacteria. Biosurfactant production was quantified by ST reduction, critical micelle concentration (CMC), emulsification capacity (EC), and cell surface hydrophobicity (CSH). Two of the isolates, P. aeruginosa 78 and 99, produced rhamnolipid biosurfactant. The strains started rhamnolipid production in the logarithmic phase. They decreased the ST of the culture from 73 dyne/cm^2 to 29 and 33 dyne/cm^2, and the CMC of produced rhamnolipids were …

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Expression And Purification Of Porcine Akirin2 In Escherichia Coli, Xiaoling Chen, Zhiqing Huang, Bo Zhou, Huan Wang, Gang Jia, Jiayun Qiao Jan 2014

Expression And Purification Of Porcine Akirin2 In Escherichia Coli, Xiaoling Chen, Zhiqing Huang, Bo Zhou, Huan Wang, Gang Jia, Jiayun Qiao

Turkish Journal of Biology

Akirin2 is a recently discovered gene related to immune responses that also plays an important role in skeletal myogenesis. In this study, in order to scale up the production of recombinant porcine Akirin2 (pAkirin2), we report the expression and purification of a His-tagged version of recombinant pAkirin2 in Escherichia coli. The pAkirin2 is a polypeptide of 203 amino acids containing 42 rare codons. The recombinant pAkirin2 was expressed as an N-terminal fusion protein with His6 tag in E. coli Rosetta (DE3) host strain. The protein was purified by Ni-IDA affinity chromatography, yielding over 90% highly purified recombinant pAkirin2, with a …

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Investigation Of Potential Virulence Genes And Antibiotic Resistance Characteristics Of Enterococcus Faecalis Isolates From Human Milk And Colostrum Samples, Si̇ne Özmen Toğay, Ayhan Temi̇z, Ayten Çelebi̇, Leyla Açik, Siddi̇ka Songül Yalçin Jan 2014

Investigation Of Potential Virulence Genes And Antibiotic Resistance Characteristics Of Enterococcus Faecalis Isolates From Human Milk And Colostrum Samples, Si̇ne Özmen Toğay, Ayhan Temi̇z, Ayten Çelebi̇, Leyla Açik, Siddi̇ka Songül Yalçin

Turkish Journal of Biology

Enterococci may improve the typical taste and flavor of fermented foods through their proteolytic and lipolytic activities. However, some enterococcal strains are recognized as nosocomial pathogens, which have virulence genes and resistance to certain antibiotics. Enteroccocci are also found in human milk microflora. The aim of this study was to investigate the potential virulence genes and antibiotic resistance characteristics of Enterococcus faecalis isolates from human milk and colostrum samples. In total, 23 Enterococcus faecalis strains were identified from human milk and colostrum samples. Antibiotic-resistant E. faecalis isolates were determined using the disk diffusion method. Vancomycin resistance genes (vanA, vanB) and …

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Evaluation Of Genotoxicity And Cytotoxicity Induced By Different Molecular Weights Of Polyethylenimine/Dna Nanoparticles, Leila Gholami, Hamid Reza Sadeghnia, Majid Darroudi, Reza Kazemi Oskuee Jan 2014

Evaluation Of Genotoxicity And Cytotoxicity Induced By Different Molecular Weights Of Polyethylenimine/Dna Nanoparticles, Leila Gholami, Hamid Reza Sadeghnia, Majid Darroudi, Reza Kazemi Oskuee

Turkish Journal of Biology

Nonviral gene delivery systems are considered to be a safe alternative to the viral system used in gene therapy. Although polyethylenimine (PEI) is among the most promising gene-carrier candidates for efficient nonviral gene delivery, safety concerns regarding its toxicity remain challenging. The aim of this study was to evaluate the less considered aspects of toxicity including genotoxicity effects of branched PEI with different molecular weights (1800 Da, 25 kDa, 750 kDa). Neuro2A mammalian cells were cultured in DMEM with 10% FBS and exposed to PEI/DNA complexes at different polymer/DNA ratios (known as the C/P ratio). To evaluate metabolic activities and …

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Development Of Durable Antimicrobial Surfaces Containing Silver- And Zinc-Ion-Exchanged Zeolites, Zeynep İyi̇gündoğdu, Selami̇ Demi̇rci̇, Nurcan Baç, Fi̇kretti̇n Şahi̇n Jan 2014

Development Of Durable Antimicrobial Surfaces Containing Silver- And Zinc-Ion-Exchanged Zeolites, Zeynep İyi̇gündoğdu, Selami̇ Demi̇rci̇, Nurcan Baç, Fi̇kretti̇n Şahi̇n

Turkish Journal of Biology

The present work involves development of stable antimicrobial materials containing silver- and zinc-ion-exchanged zeolites. Faujasite X and Linde type A zeolites were synthesized, and following ion exchange with Ag^+ and Zn^{++} ions they were found to exhibit antimicrobial effects against bacteria (E. coli, P. aeruginosa, and S. aureus), yeast (C. albicans and C. glabrata), and fungi (A. niger and P. expansum). Zeolites-X and -A containing silver and zinc ions were then mixed with various coating materials, including paints and polypropylene, to develop antimicrobial composites. The long-term antimicrobial characteristics of zeolite-containing composite materials were investigated by inoculating selected microorganisms onto the …

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Efficiency Of Using Rapd And Issr Markers In Evaluation Of Genetic Diversity In Sugar Beet, Vusala Izzatullayeva, Zeynal Akparov, Sevda Babayeva, Javid Ojaghi, Mehraj Abbasov Jan 2014

Efficiency Of Using Rapd And Issr Markers In Evaluation Of Genetic Diversity In Sugar Beet, Vusala Izzatullayeva, Zeynal Akparov, Sevda Babayeva, Javid Ojaghi, Mehraj Abbasov

Turkish Journal of Biology

Random amplified polymorphic DNA (RAPD) and intersimple sequence repeat (ISSR) markers were used for comparative analysis of genetic variation in 42 sugar beet accessions. A total of 24 polymorphic primers (12 RAPD and 12 ISSR) were used. The RAPD primers generated 204 amplification products and the ISSR primers produced 178 fragments, 190 and 173 of which were polymorphic, respectively. The average polymorphism level with the ISSR markers (97.2%) was higher than that with the RAPD primers (93%). High genetic diversity indices for both marker types (0.86 for RAPD and 0.91 for ISSR) suggested that these methods were equally effective in …

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Herbicide-Tolerant Sugarcane (Saccharum Officinarum L.) Plants: An Unconventional Method Of Weed Removal, Idrees Ahmad Nasir, Bushra Tabassum, Zahida Qamar, Muhammad Aslam Javed, Muhammad Tariq, Abdul Munim Farooq, Shahid Javed Butt, Abdul Qayyum, Tayyab Husnain Jan 2014

Herbicide-Tolerant Sugarcane (Saccharum Officinarum L.) Plants: An Unconventional Method Of Weed Removal, Idrees Ahmad Nasir, Bushra Tabassum, Zahida Qamar, Muhammad Aslam Javed, Muhammad Tariq, Abdul Munim Farooq, Shahid Javed Butt, Abdul Qayyum, Tayyab Husnain

Turkish Journal of Biology

Unnecessary weed growth in sugarcane fields forces plants to compete for nutrients and sunlight for survival, which most often leads to significant yield losses. As chemical herbicides cannot differentiate between crop plants and weeds, the development of herbicide-tolerant crops is anticipated. Four sugarcane varieties, CPF-234, CPF-213, HSF-240, and CPF-246, were used to develop glyphosate herbicide tolerance. A glyphosate-tolerant gene of 1368 bp cloned directionally under the 35S promoter with the \Beta-glucuronidase (GUS) reporter gene was used as the transgene. Through the biolistic transformation of sugarcane, calli of all cultivars were transformed with glyphosate-tolerant gene constructs. Efficient regeneration conditions were optimized …

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Enhanced Enzymatic Xylose/Cellulose Fractionation From Alkaline Liquor-Pretreated Corn Cob By Surfactant Addition And Separate Fermentation To Bioethanol, Yefu Chen, Xinxin Zhang, Shijie Zhang, Weijun Qin, Changhui Guo, Xuewu Guo, Dongguang Xiao Jan 2014

Enhanced Enzymatic Xylose/Cellulose Fractionation From Alkaline Liquor-Pretreated Corn Cob By Surfactant Addition And Separate Fermentation To Bioethanol, Yefu Chen, Xinxin Zhang, Shijie Zhang, Weijun Qin, Changhui Guo, Xuewu Guo, Dongguang Xiao

Turkish Journal of Biology

Xylanase xylose/cellulose fractionation can efficiently improve the utilization of xylose and cellulose. Improvement of xylanase performance during hemicellulose hydrolysis can increase xylose/cellulose fractionation efficiency. To utilize xylose and cellulose efficiently, an enzymatic xylose/cellulose fractionation and a separate fermentation bioethanol process were performed. Alkaline liquor-pretreated corn cob was subjected to xylose/cellulose fractionation with xylanase in the presence or absence of the following mixed surfactants: polyoxyethylene(20)-sorbitan-monooleate (0.15% v/v), polyethylene glycol 6000 (0.15% w/v), bovine serum albumin (0.15% w/v), and rhamnolipid (0.005% v/v). The hemicellulose hydrolysis yield (HHY) in the presence of mixed surfactants was 70.5%, which was 66% higher than that of …

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Evaluation Of Orange Peel, An Industrial Waste, For The Production Of Aspergillus Sojae Polygalacturonase Considering Both Morphology And Rheology Effects, Ni̇han Göğüş, Bengi̇ Hakgüder Taze, Hande Demi̇r, Canan Tari, Sevcan Ünlütürk, Marcelo Fernandez Lahore Jan 2014

Evaluation Of Orange Peel, An Industrial Waste, For The Production Of Aspergillus Sojae Polygalacturonase Considering Both Morphology And Rheology Effects, Ni̇han Göğüş, Bengi̇ Hakgüder Taze, Hande Demi̇r, Canan Tari, Sevcan Ünlütürk, Marcelo Fernandez Lahore

Turkish Journal of Biology

Orange peel is an agroindustrial waste rich in pectin and known to be an inducer for pectinase production. The use of this low-cost substrate for the production of an industrially important enzyme, polygalacturonase (PG), can be an alternative way to turn this waste into a value-added product, contributing to the reduction of environmental waste disposal problems. Enzyme productions by fungal microorganisms are affected by environmental and nutritional factors, demanding the determination of optimum conditions for maximum enzyme production with the desired fungal morphology and broth rheology. Therefore, complex and additional carbon sources were optimized with respect to PG production by …

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Large-Scale Purification Of A Bacteriocin Produced By Leuconostoc Mesenteroides Subsp. Cremoris Using Diatomite Calcium Silicate, Hali̇l Dündar, Ömür Çeli̇kbiçak, Beki̇r Sali̇h, Tahsi̇n Faruk Bozoğlu Jan 2014

Large-Scale Purification Of A Bacteriocin Produced By Leuconostoc Mesenteroides Subsp. Cremoris Using Diatomite Calcium Silicate, Hali̇l Dündar, Ömür Çeli̇kbiçak, Beki̇r Sali̇h, Tahsi̇n Faruk Bozoğlu

Turkish Journal of Biology

Leuconostoc mesenteroides subsp. cremoris strain W3, isolated from wine, was previously found to produce a bacteriocin with inhibitory activity towards malolactic bacteria and hence inhibit malolactic fermentation in model wine medium. The bacteriocin, which we termed mesentericin W3, was purified by multistep chromatography and found in a previous study to be similar to mesentericin Y105, albeit with a low recovery (3.2%). In this study, we aimed to achieve large-scale isolation of mesentericin W3 by adsorption of the bacteriocin from culture supernatant onto Micro-Cel (diatomite calcium silicate) and then by subsequent desorption. Water-soluble surfactants including Tween 80, Triton X-100, sodium deoxycholate, …

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Bacterial Toxin Colicin N-T Domain Structure Changes To Ordered State Upon Binding C-Terminal Domain Of Tola, Yakup Ulusu, Sema Bi̇lgi̇n Şentürk, Fatma Gedi̇kli̇, Jeremy H. Lakey, İsa Gökçe Jan 2014

Bacterial Toxin Colicin N-T Domain Structure Changes To Ordered State Upon Binding C-Terminal Domain Of Tola, Yakup Ulusu, Sema Bi̇lgi̇n Şentürk, Fatma Gedi̇kli̇, Jeremy H. Lakey, İsa Gökçe

Turkish Journal of Biology

Colicin N is a bacterial toxin that kills Escherichia coli and related cells. Its mode of action is of interest in protein import and toxicology. Colicin N translocates across the E. coli outer membrane and periplasm by interacting with several receptors. The translocation process involves the interaction of the colicin N with the outer membrane porin OmpF and subsequently with the integral membrane protein TolA. The N-terminal domain of colicin N is involved in the import process. TolA consists of 3 domains. The N-terminal domain of colicin N interacts with the C-terminal domain of TolA at later stages of the …

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Cloning And Expression Analysis Of 1-Deoxy-D-Xylulose-5-Phosphate Synthase Gene From The Medicinal Plant Conyza Blinii H.Lév., Rong Sun, Shan Liu, Jing-Lei Gao, Zi-Zhong Tang, Hui Chen, Cheng-Lei Li, Qi Wu Jan 2014

Cloning And Expression Analysis Of 1-Deoxy-D-Xylulose-5-Phosphate Synthase Gene From The Medicinal Plant Conyza Blinii H.Lév., Rong Sun, Shan Liu, Jing-Lei Gao, Zi-Zhong Tang, Hui Chen, Cheng-Lei Li, Qi Wu

Turkish Journal of Biology

Conyza blinii H.Lév. is a traditional Chinese medicinal plant that is distributed mainly in southwestern Sichuan and northern Yunnan. Its characteristic product is blinin, which has, among other properties, antigastric ulcer activity, and can serve as a quality-control standard for such medicine. The problem is that C. blinii only produces low yields of blinin. As a diterpene, blinin is likely formed by the methylerythritol phosphate pathway. While 1-deoxy-D-xylulose-5-phosphate synthase (DXS) is the first rate-limiting enzyme in diterpenoid biosynthesis, it is a switch in the pathway. The DXS gene was successfully cloned and characterized from C. blinii by homologous cloning and …

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Autophagy And Cancer, Hacer Ezgi̇ Karakaş, Devri̇m Gözüaçik Jan 2014

Autophagy And Cancer, Hacer Ezgi̇ Karakaş, Devri̇m Gözüaçik

Turkish Journal of Biology

Autophagy is an evolutionary conserved intracellular degradation and stress response mechanism that is mainly responsible for the breakdown and recycling of cytoplasmic materials, including long-lived proteins, protein aggregates, and damaged organelles. In this way, autophagy provides the cell with building blocks and allows the maintenance of homeostasis under stress conditions such as growth factor deficiency, nutrient deprivation, hypoxia, and toxins. Consequently, abnormalities of autophagy contribute to a number of pathologies ranging from neurodegenerative diseases to cancer. Autophagy was reported to have a dual role in cancer. Depending on cancer stage, autophagy seems to act as tumor suppressor or as a …

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Cancer Stem Cells: Emerging Actors In Both Basic And Clinical Cancer Research, Di̇dem Karakaş, Buse Cevatemre, Engi̇n Ulukaya Jan 2014

Cancer Stem Cells: Emerging Actors In Both Basic And Clinical Cancer Research, Di̇dem Karakaş, Buse Cevatemre, Engi̇n Ulukaya

Turkish Journal of Biology

Cancer stem cells (CSCs) are a small subset of cancer cells within a tumor that are responsible for tumorigenesis and contribute to drug resistance. The CSC displays an anchorage-independent survival, active DNA-repair capacity, and relative quiescence and is capable of self-renewing and maintaining tumor growth and heterogeneity. At the molecular level, there are several signaling pathways (e.g., Wnt/Beta-catenin, Notch, and Hedgehog) to control CSC properties and alteration of these pathways has been recognized as an essential step for CSC transformation. Emerging evidence suggests that CSCs are clinically relevant. These cells are resistant to conventional chemotherapy and radiation treatment. Therefore, CSCs …

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