Digital Commons Network^™

Competition Between Lone Pair-Π, Halogen Bond, And Hydrogen Bond In Adducts Of Water With Perhalogenated Alkenes C2clnf4-N (N = 0-4), U. Adhikari, Steve Scheiner

Chemistry and Biochemistry Faculty Publications

A thorough search of the potential energy surface is carried out for heterodimers of water with C2ClnF4−n. Three different types of interactions are observed. Structures dominated by a lone pair–π interaction have the highest binding energies, and are stabilized by charge transfer from O lone pairs of H2O to the Csingle bondC π* antibonding orbital of the alkene. Halogen-bonded O⋯Cl complexes are slightly less strongly bound, followed by OH⋯X hydrogen bonds. The replacements of Cl by F atoms have only small effects upon binding energies. Inclusion of vibrational and entropic effects removes the clear energetic superiority of lp–π binding energies. …

Quaking Aspen In The Residential-Wildland Interface: Elk Herbivory Hinders Forest Conservation, Paul C. Rogers, Allison Jones, James C. Catlin, James Shuler, Arthur Morris, Michael R. Kuhns

Wildland Resources Faculty Publications

Quaking aspen (Populus tremuloides Michx.) forests are experiencing numerous impediments across North America. In the West, recent drought, fire suppression, insects, diseases, climate trends, inappropriate management, and ungulate herbivory are impacting these high biodiversity forests. Additionally, ecological tension zones are sometimes created where the above factors intermingle with jurisdictional boundaries. The public-private land interface may result in stress to natural areas where game species find refuge and plentiful forage at the expense of ecosystem function. We examined putative herbivore impacts to aspen forests at Wolf Creek Ranch (WCR), a large residential landscape in northern Utah. Forty-three ha-1 monitoring plots were …

The Necessity Of Humanities In Medicine: How English Studies And The Arts Contribute To The Human Experience, Ashley Beason-Manes

Journal of South Texas English Studies

No abstract provided.

Cross-Pollinating The Mind: Reflections At The Crossroads Of English And Stem Studies, Cindy Lutenbacher, Alison Ligon

Journal of South Texas English Studies

No abstract provided.

The View From Ventress - 2014, University Of Mississippi. College Of Liberal Arts

Liberal Arts Newsletters

Special Section: The Rise of Health Professions. Over the past decade, the health-care sector added jobs month after month, even when jobs were disappearing elsewhere in the economy. The field is projected to add many more in the coming decade, so it makes sense that the number of students majoring in health-related fields rose sharply. Roughly one in 10 college graduates now gets a health-related degree.

Energetic Demands Of Immature Sea Otters From Birth To Weaning: Implications For Maternal Costs, Reproductive Behavior And Population-Level Trends, Nicole Thometz, M. T. Tinker, M. M. Staedler, K. A. Mayer, T. M. Williams

Biology Faculty Publications

Sea otters (Enhydra lutris) have the highest mass-specific metabolic rate of any marine mammal, which is superimposed on the inherently high costs of reproduction and lactation in adult females. These combined energetic demands have been implicated in the poor body condition and increased mortality of female sea otters nearing the end of lactation along the central California coast. However, the cost of lactation is unknown and currently cannot be directly measured for this marine species in the wild. Here, we quantified the energetic demands of immature sea otters across five developmental stages as a means of assessing the …

A Testing Based Extraction Algorithm For Identifying Significant Communities In Networks, James D. Wilson, Simi Wang, Peter J. Mucha, Shankar Bhamidi, Andrew B. Nobel

Mathematics

A common and important problem arising in the study of networks is how to divide the vertices of a given network into one or more groups, called communities, in such a way that vertices of the same community are more interconnected than vertices belonging to different ones. We propose and investigate a testing based community detection procedure called Extraction of Statistically Significant Communities (ESSC). The ESSC procedure is based on p-values for the strength of connection between a single vertex and a set of vertices under a reference distribution derived from a conditional configuration network model. The procedure automatically selects …

Common Data Set, 2014-2015, Office Of Institutional Research, Bridgewater State University

Common Data Sets

No abstract provided.

List Of Contributors

The Oval

No abstract provided.

Undergraduate Review, Vol. 10, 2013/2014

Undergraduate Review

No abstract provided.

Intrinsic And Extrinsic Factors Influence Expression Of Defensive Behavior In Plains Hog‐Nosed Snakes [Abstract], Andrew M. Durso, Stephen J. Mullin

Faculty Publications

No abstract provided.

Assessing Multiple Endpoints Of Atrazine Ingestion On Gravid Northern Watersnakes (Nerodia Sipedon) And Their Offspring [Abstract], L. A. Neuman-Lee, K. F. Gaines, K. A. Baumgartner, J. R. Voorhees, J. M. Novak, Stephen J. Mullin

Faculty Publications

No abstract provided.

Cloning, Expression, Sequence Analysis And Homology Modeling Of The Prolyl Endoprotease From Eurygaster Integriceps Puton, Ravi Chandra Yandamuri, Ranjeeta Gautam, Charles Darkoh, Vanitha Dareddy, Mustapha El-Bouhssini, Beatrice A. Clack

Faculty Publications

Eurygaster integriceps Puton, commonly known as sunn pest, is a major pest of wheat in Northern Africa, the Middle East and Eastern Europe. This insect injects a prolyl endoprotease into the wheat, destroying the gluten. The purpose of this study was to clone the full length cDNA of the sunn pest prolyl endoprotease (spPEP) for expression in E. coli and to compare the amino acid sequence of the enzyme to other known PEPs in both phylogeny and potential tertiary structure. Sequence analysis shows that the 5ꞌ UTR contains several putative transcription factor binding sites for transcription factors known to be …

Effect Of Origanum Chemotypes On Broiler Intestinal Bacteria, Liliana Betancourt, Fernando Rodriguez, Vienvilay Phandanouvong, Claudia Ariza-Nieto, Michael Hume, David Nisbet, German Afanador-Tellez, Alexandra Martynova-Van Kley, Armen Nalian

Faculty Publications

Essential oils have been proposed as alternatives to antibiotic use in food animal production. This study evaluated 3 chemotypes of the Origanum genus, containing varying amounts of secondary metabolites carvacrol, thymol, and sabinene, in the broiler chicken diet. Aerial parts of Origanum vulgare L. (OL), O. vulgare L. ssp. hirtum (OH), and O. majorana (OM) were collected from a greenhouse located in the high altitude Sabana de Bogotá (Savanna of Bogotá) and O. vulgare L. ssp. hirtum (OG) produced and ground in Greece. Oregano essential oils (OEO) from these plants were obtained by steam distillation and analyzed by gas chromatography …

Relationships Between The Weedy (Amaranthaceae) And The Grain Amaranths [Abstract], Kiel D. Kielinski, Felix Jimenez, Eric N. Jellen, Peter J. Maughan, Scott M. Smith, Donald B. Pratt

Faculty Publications

No abstract provided.

A Td-Dft Study Of The Absorption Spectra Of Mono-Nitrated Fluoranthenes [Abstract], Kefa Karimu Onchoke

Faculty Publications

No abstract provided.

Energy-Driven Pattern Formation In Planar Dipole-Dipole Systems, Jaron P. Kent-Dobias

HMC Senior Theses

A variety of two-dimensional fluid systems, known as dipole-mediated systems, exhibit a dipole-dipole interaction between their fluid constituents. The com- petition of this repulsive dipolar force with the cohesive fluid forces cause these systems to form intricate and patterned structures in their boundaries. In this thesis, we show that the microscopic details of any such system are irrelevant in the macroscopic limit and contribute only to a constant offset in the system’s energy. A numeric model is developed, and some important stable domain morphologies are characterized. Previously unresolved bifurcating branches are explored. Finally, by applying a random energy background to …

How I Came To Exist, Josh Wagner

The Oval

No abstract provided.

Prioritizing Protein Complexes Implicated In Human Diseases By Network Optimization., Yong Chen, Thibault Jacquemin, Shuyan Zhang, Rui Jiang

College of Science & Mathematics Departmental Research

BACKGROUND: The detection of associations between protein complexes and human inherited diseases is of great importance in understanding mechanisms of diseases. Dysfunctions of a protein complex are usually defined by its member disturbance and consequently result in certain diseases. Although individual disease proteins have been widely predicted, computational methods are still absent for systematically investigating disease-related protein complexes.

RESULTS: We propose a method, MAXCOM, for the prioritization of candidate protein complexes. MAXCOM performs a maximum information flow algorithm to optimize relationships between a query disease and candidate protein complexes through a heterogeneous network that is constructed by combining protein-protein interactions …

Integrated Omics Study Delineates The Dynamics Of Lipid Droplets In Rhodococcus Opacus Pd630., Yong Chen, Yunfeng Ding, Li Yang, Jinhai Yu, Guiming Liu, Xumin Wang, Shuyan Zhang, Dan Yu, Lai Song, Hangxiao Zhang, Congyan Zhang, Linhe Huo, Chaoxing Huo, Yang Wang, Yalan Du, Huina Zhang, Peng Zhang, Huimin Na, Shimeng Xu, Yaxin Zhu, Zhensheng Xie, Tong He, Yue Zhang, Guoliang Wang, Zhonghua Fan, Fuquan Yang, Honglei Liu, Xiaowo Wang, Xuegong Zhang, Michael Q Zhang, Yanda Li, Alexander Steinbüchel, Toyoshi Fujimoto, Simon Cichello, Jun Yu, Pingsheng Liu

College of Science & Mathematics Departmental Research

Rhodococcus opacus strain PD630 (R. opacus PD630), is an oleaginous bacterium, and also is one of few prokaryotic organisms that contain lipid droplets (LDs). LD is an important organelle for lipid storage but also intercellular communication regarding energy metabolism, and yet is a poorly understood cellular organelle. To understand the dynamics of LD using a simple model organism, we conducted a series of comprehensive omics studies of R. opacus PD630 including complete genome, transcriptome and proteome analysis. The genome of R. opacus PD630 encodes 8947 genes that are significantly enriched in the lipid transport, synthesis and metabolic, indicating a super …

Gender In The Everyday Life Of The Russian Home, Jyoti Arvey

Slavic Studies Honors Papers

Despite significant shifts in Russia’s social and political spheres since the end of the Soviet Union in 1991, traditional gender norms within the domestic sphere have remained generally constant to the present day. The home is a crucial site of gender identity construction due to its importance in Russian culture as a space that has long functioned as a refuge from public life and official discourse. Based on ethnographic interviews with twenty residents of Ufa about their daily practices in the domestic sphere, this study aims to illuminate the domestic social structures within the Russian home in order to achieve …

Language Ideologies In Morocco, Sybil Bullock

Anthropology Department Honors Papers

The process of decolonization in Morocco has created new spaces for displaying national identity, most notably through the development of official policies regarding the acquisition, promotion, and performance of language in the public sphere. The flow of languages into the Moroccan linguistic mosaic has facilitated the transmission of beliefs about language as well. These beliefs are far from neutral, for each language possesses symbolic capital that grants access to explicitly demarcated domains of power. In this thesis, I examine the construction of national power that resides in discourses on multilingualism in Morocco. In the process, I uncover the sources of …

L2: Learner Autobiograpies, Vol. 1, Petko Ivanov, Jenna Gavrielle Adler, Dagna Bilski, Lyla Bloom, Sybil Bullock, Kayla Cogle, Brian Damacio, Olivia Dufour, Nick Fischetti, Nadiya Hafizova, Tomoro Hamano, Kamal Kariem, Andrea Levinsky, Glindys Luciano, Sara Mclean, Winona Mantelli, Bo Martin, Morgan Rentko, Lizz Ocampo, Kenan Wan, Gabby Wang

Slavic Studies Student Projects and Publications

No abstract provided.

Analyzing Networks Of Phenotypes In Complex Diseases: Methodology And Applications In Copd, Jen-Hwa Chu, Craig P. Hersh, Peter J. Castaldi, Michael H. Cho, Benjamin A. Raby, Nan Laird, Russell Bowler, Stephen I. Rennard, Joseph Loscalzo, John Quackenbush, Edwin K. Silverman

Journal Articles: Pulmonary & Critical Care Med

BACKGROUND: The investigation of complex disease heterogeneity has been challenging. Here, we introduce a network-based approach, using partial correlations, that analyzes the relationships among multiple disease-related phenotypes.

RESULTS: We applied this method to two large, well-characterized studies of chronic obstructive pulmonary disease (COPD). We also examined the associations between these COPD phenotypic networks and other factors, including case-control status, disease severity, and genetic variants. Using these phenotypic networks, we have detected novel relationships between phenotypes that would not have been observed using traditional epidemiological approaches.

CONCLUSION: Phenotypic network analysis of complex diseases could provide novel insights into disease susceptibility, disease …

Responsible, Renewable, And Redesigned: How The Renewable Energy Movement Can Make Peace With The Endangered Species Act, Kalyani Robbins

Faculty Publications

One of the most promising routes to a sustainable energy future, as well as climate change mitigation, is the development of renewable energy sources such as wind, solar energy, and hydropower. Indeed, scientists have proposed plans to move completely (100 percent!) to these energy sources within a couple of decades. Mark Z. Jacobson and M.A. Delucchi, scientists from Stanford and U.C. Davis, have outlined a plan to achieve this goal, thereby “eliminating all fossil fuels”. Hydroelectric power already provides almost one-fifth of the world's electricity, and wind and solar development is rapidly picking up as well. However, before we leave …

Allele-Specific Network Reveals Combinatorial Interaction That Transcends Small Effects In Psoriasis Gwas, Sharlee Climer, Alan R. Templeton, Weixiong Zhang

Computer Science Faculty Works

Hundreds of genetic markers have shown associations with various complex diseases, yet the “missing heritability” remains alarmingly elusive. Combinatorial interactions may account for a substantial portion of this missing heritability, but their discoveries have been impeded by computational complexity and genetic heterogeneity. We present BlocBuster, a novel systems-level approach that efficiently constructs genome-wide, allele-specific networks that accurately segregate homogenous combinations of genetic factors, tests the associations of these combinations with the given phenotype, and rigorously validates the results using a series of unbiased validation methods. BlocBuster employs a correlation measure that is customized for single nucleotide polymorphisms and returns a …

The Evolution And Unintended Consequences Of Legal Responses To Childhood Sexual Abuse: Seeking Justice And Prevention, Alexandra Hunstein Roffman

Children's Legal Rights Journal

No abstract provided.

Socioeconomic Determinants Of Obesity In The United States, Jonathan Skaza

Empirical Economic Bulletin, An Undergraduate Journal

This paper investigates the socioeconomic determinants of obesity (as measured by BMI) in the United States. Logistic regression is employed on cross-sectional data from the 2011-2012 National Health and Nutrition Examination Survey (NHANES). The results show that, in general, holding other factors constant, individuals with a college diploma are less likely to be obese than those with a lesser education (except in extreme cases), married individuals are more likely to be obese than those that are not married, and females are more likely to be obese than males. Additionally, compared to white persons, Black and Hispanic persons have a greater …

Do No Harm: The Enhanced Application Of Legal And Professional Standards In Protecting Youth From The Harm Of Isolation In Youth Correctional Facilities, Kim Brooks Tandy

Children's Legal Rights Journal

No abstract provided.

Statistically Speaking: Deepening Our Understanding Of Fatal Childhood Maltreatment, Sarah Silins

Children's Legal Rights Journal

No abstract provided.