Digital Commons Network^™

A Low-Power Compact Nqr Based Explosive Detection System, Xinwang Zhang, Nathan Schemm, Sina Balkır, Michael W. Hoffman

Department of Electrical and Computer Engineering: Faculty Publications

Nuclear quadruple resonance (NQR) has been studied for explosive detection for years. Some prototype NQR-based detection systems have been reported, but were all designed from the laboratory perspective, with bulky sizes and high power consumption. To achieve a portable NQR-based detection system for field applications, a low-power compact system utilizing state-of-the-art semiconductor technologies is presented in this paper. Several novel circuits for the key modules are proposed, including a Class-D type power amplifier, a power multiplexing and matching network, a customized IC with integrated analog signal processing chain, and a microcontroller-based logic control unit. An advanced digital signal processor platform …

A Comparison Between Uwb And Tdoa Systems For Smart Space Localization, Lianlin Zhao, Eric T. Psota, Lance C. Pérez

Department of Electrical and Computer Engineering: Faculty Publications

A comparison between two different systems for smart space localization is presented. A smart space implemented at the University of Nebraska-Lincoln was designed for automated and intelligent assistance for elderly and disabled people, and also for astronauts in space. Localization is a critical component of the smart space since it provides the system with the movement patterns and location of its inhabitants. Two systems have been deployed and evaluated for the purpose of localizing people in the smart space: the Ubisense ultra-wide band (UWB) system and the Cricket indoor localization system. Both systems support three-dimensional localization within the smart space. …

Simulation Supported Estimation Of End-To-End Transmission Parameters In Non-Viral Gene Delivery, Beata Wysocki, Timothy M. Martin, Tadeusz A. Wysocki, Angela K. Pannier

Department of Electrical and Computer Engineering: Faculty Publications

Communications, in general, involve delivery of information from a source to a sink. At nano-scale, an example of a man-made communications involving interfacing with biological systems at intra-cellular level is non-viral gene delivery. From a telecommunications engineering perspective, important end-to-end parameters of such a system are: the endto- end delay, system capacity, and packet loss rate. There are neither known methods to estimate those parameters theoretically nor they are ready available from standard measurements. The paper provides estimates for those parameters based on the simulation of non-viral gene delivery system based on the queuing theory. The simulator used has bee

Whole Genome Sequence Of A Turkish Individual, Haluk Dogan, Handan Can, Hasan H. Otu

Department of Electrical and Computer Engineering: Faculty Publications

Although whole human genome sequencing can be done with readily available technical and financial resources, the need for detailed analyses of genomes of certain populations still exists. Here we present, for the first time, sequencing and analysis of a Turkish human genome. We have performed 35x coverage using paired-end sequencing, where over 95% of sequencing reads are mapped to the reference genome covering more than 99% of the bases. The assembly of unmapped reads rendered 11,654 contigs, 2,168 of which did not reveal any homology to known sequences, resulting in,1 Mbp of unmapped sequence. Single nucleotide polymorphism (SNP) discovery resulted …

Theory And Research From The Communication Field: Discourses That Constitute And Reflect Families, Kathleen M. Galvin, Dawn O. Braithwaite

Department of Communication Studies: Faculty Publications

From the disciplinary perspective of communication studies, we review theory and research in family communication, including a brief history of the family communication field; the contributions of a family communication perspective; and 5 theories of family communication: communication accommodation theory, communication privacy management theory, family communication patterns theory, narrative theor(ies), and relational dialectics theory. We then illustrate the concept of discourse dependence in family communication processes and discuss current trends in family communication research. We also suggest emerging directions for family communication scholarship.

Parental Socialization Of Ethnic Identity: Perspectives From Multiethnic Adults, Audra K. Nuru, Jordan Soliz

Department of Communication Studies: Faculty Publications

Participants (N = 113) who indicated that their parents had different ethnic or racial backgrounds provided retrospective accounts of parental messages they perceived as influential in the development of their ethnic identity. Three themes of parental messages concerning ethnic identity emerged from the participants’ responses: (a) parental messages of encouragement/egalitarianism, (b) parental messages of preference, and (c) lack of explicit parental messages/silence. Findings are discussed in terms of implications for understanding multiethnic identity development, and future directions for research are put forth.

Salmonella Enterica Serovar Typhimurium-Infected Pigs With Different Shedding Levels Exhibit Distinct Clinical, Peripheral Cytokine And Transcriptomic Immune Response Phenotypes, Susan Knetter, Shawn Bearson, Ting-Hua Huang, Dason Kurkiewicz, Martine Schroyen, Dan Nettleton, Daniel Berman, Valorie Cohen, Joan Lunney, Amanda Ramer-Tait, Michael Wannemuehler, Christopher Tuggle

Department of Food Science and Technology: Faculty Publications

Foodborne salmonellosis costs the US $2.7 billion/year, including $100.0 million in annual losses to pork producers. Pigs colonized with Salmonella are usually asymptomatic with varied severity and duration of fecal shedding. Thus, understanding the responses that result in less shedding may provide a mechanism for control. Fifty-four pigs were inoculated with Salmonella enterica serovar Typhimurium (ST) and clinical signs, fecal ST shedding, growth performance, peripheral cytokines and whole blood gene expression were measured. Persistently shedding (PS) pigs had longer pyrexia and elevated serum IL-1β, TNF-α and IFN-ϒcompared with low shedding (LS) pigs, while LS pigs had brief pyrexia, less shedding …

Allergic Sensitization: Screening Methods, Gregory S. Ladics, Jeremy Fry, Richard E. Goodman, Corinne Herouet-Guicheney, Karin Hoffman-Sommergruber, Charlotte B. Madsen, Andre Penninks, Anna Pomes, Erwin L. Roggen, Joost Smit, Jean-Michel Wal

Department of Food Science and Technology: Faculty Publications

Experimental in silico, in vitro, and rodent models for screening and predicting protein sensitizing potential are discussed, including whether there is evidence of new sensitizations and allergies since the introduction of genetically modified crops in 1996, the importance of linear versus conformational epitopes, and protein families that become allergens. Some common challenges for predicting protein sensitization are addressed: (a) exposure routes; (b) frequency and dose of exposure; (c) dose-response relationships; (d) role of digestion, food processing, and the food matrix; (e) role of infection; (f) role of the gut microbiota; (g) influence of the structure and physicochemical properties of the …

From Prediction To Function Using Evolutionary Genomics: Human-Specific Ecotypes Of Lactobacillus Reuteri Have Diverse Probiotic Functions, Jennifer K. Spinler, Amrita Sontakke, Emily B. Hollister, Susan F. Venable, Phaik Lyn Oh, Miriam A. Balderas, Delphine M.A. Saulnier, Toni-Ann Mistretta, Sridevi Devaraj, Jens Walter, James Versalovic, Sarah K. Highlander

Department of Food Science and Technology: Faculty Publications

The vertebrate gut symbiont Lactobacillus reuteri has diversified into separate clades reflecting host origin. Strains show evidence of host adaptation, but how host-microbe coevolution influences microbial-derived effects on hosts is poorly understood. Emphasizing human-derived strains of L. reuteri, we combined comparative genomic analyses with functional assays to examine variations in host interaction among genetically distinct ecotypes. Within clade II or VI, the genomes of human-derived L. reuteri strains are highly conserved in gene content and at the nucleotide level. Nevertheless, they share only 70-90% of total gene content, indicating differences in functional capacity. Human-associated lineages are distinguished by genes related …

Update Of The Who/Iuis Allergen Nomenclature Database Based On Analysis Of Allergen Sequences, C. Radauer, A. Nandy, F. Ferreira, Richard E. Goodman, J. N. Larsen, J. Lidholm, A. Pomés, M. Raulf-Heimsoth, P. Rozynek, W. R. Thomas, Heimo Breiteneder

Department of Food Science and Technology: Faculty Publications

The IUIS Allergen Nomenclature Sub-Committee, under the auspices of the World Health Organization and the International Union of Immunological Societies, maintains the systematic nomenclature of allergenic proteins and publishes a database of approved allergen names on its Web site, www.allergen.org. In this paper, we summarize updates of allergen names approved at the meetings of the committee in 2011 through 2013. These changes reflect recent progress in identification, cloning, and sequencing of allergens. The goals of this update were to increase consistency in the classification of allergens, isoallergens, and variants and in the incorporation of the evolutionary classification of proteins into …

Safety Assessment Of The Calcium-Binding Protein, Apoaequorin, Expressed By Escherichia Coli, Daniel L. Moran, Afua O. Tetteh, Richard E. Goodman, Mark Y. Underwood

Department of Food Science and Technology: Faculty Publications

Calcium-binding proteins are ubiquitous modulators of cellular activity and function. Cells possess numerous calcium-binding proteins that regulate calcium concentration in the cytosol by buffering excess free calcium ion. Disturbances in intracellular calcium homeostasis are at the heart of many age-related conditions making these proteins targets for therapeutic intervention. A calcium-binding protein, apoaequorin, has shown potential utility in a broad spectrum of applications for human health and well-being. Large-scale recombinant production of the protein has been successful; enabling further research and development and commercialization efforts. Previous work reported a 90-day subchronic toxicity test that demonstrated this protein has no toxicity by …

Grain Sorghum Whole Kernel Oil Lowers Plasma And Liver Cholesterol In Male Hamsters With Minimal Wax Involvement, Bo Hyun Lee, Thomas M. Carr, Curtis Weller, Susan L. Cuppett, Ismail M. Dweikat, Vicki Schlegel

Department of Food Science and Technology: Faculty Publications

The lipid fraction of the grain sorghum whole kernel (GS-WK) (i.e., phytosterol rich oil or policosanol rich wax) responsible for lowering cholesterol in hamsters fed the crude lipid (wax + oil) was determined. As expected, hamsters fed an atherogenic diet for a four week period presented with higher plasma non-HDL plasma and liver esterified cholesterol than those on the low fat diet. However, the atherogenic diet containing 5% (w/w) oil significantly lowered non-HDL plasma and liver cholesterol. Although the 5% wax supplement did not affect either plasma or liver cholesterol, excreted neutral sterol and bile acid were slightly higher than …

Investigation Of Bacterial Diversity In The Feces Of Cattle Fed Different Diets, M. Kim, J. Kim, L. A. Kuehn, J. L. Bono, E. D. Berry, N. Kalchayanand, Harvey C. Freetly, Andrew K. Benson, J. E. Wells

Department of Food Science and Technology: Faculty Publications

The objective of this study is to investigate individual animal variation of bovine fecal microbiota including as affected by diets. Fecal samples were collected from 426 cattle fed 1 of 3 diets typically fed to feedlot cattle: 1) 143 steers fed finishing diet (83% dry-rolled corn, 13% corn silage, and 4% supplement), 2) 147 steers fed late growing diet (66% dry-rolled corn, 26% corn silage, and 8% supplement), and 3) 136 heifers fed early growing diet (70% corn silage and 30% alfalfa haylage). Bacterial 16S rRNA gene amplicons were determined from individual fecal samples using next-generation pyrosequencing technology. A total …

Activation Of Autophagy And Ampk By Gamma-Tocotrienol Suppresses The Adipogenesis In Human Adipose Derived Stem Cells, Lu Zhao, Jung-Heun Ha, Meshail Okla, Soonkyu Chung

Department of Food Science and Technology: Faculty Publications

Scope: This study investigated the mechanistic details by which gamma-tocotrienol (γ-T3) manipulates adipocyte differentiation in human adipose derived stem cells (hASCs).

Methods and results: γ-T3 specifically inhibited the early stage of adipocyte differentiation by acting on downstream of C/EBP-β but upstream of C/EBP-α in hASCs. In searching a potential mechanism, we identified that γ-T3 promoted two catabolic signaling pathways: (i) AMP kinase (AMPK), and (ii) enhanced autophagy, as assessed by autophagic flux and cytosolic autophagosome (LC3II) accumulation. In addition, chronic exposure of γ-T3 induced caspase3-mediated apoptotic cell death. The blockage of AMPK by a dominant negative mutant of …

Epidemic Clostridium Difficile Strains Demonstrate Increased Competitive Fitness Compared To Nonepidemic Isolates, Catherine D. Robinson, Jennifer M. Auchtung, James Collins, Robert A. Britton

Department of Food Science and Technology: Faculty Publications

Clostridium difficile infection is the most common cause of severe cases of antibiotic-associated diarrhea (AAD) and is a significant health burden. Recent increases in the rate of C. difficile infection have paralleled the emergence of a specific phylogenetic clade of C. difficile strains (ribotype 027; North American pulsed-field electrophoresis 1 [NAP1]; restriction endonuclease analysis [REA] group BI). Initial reports indicated that ribotype 027 strains were associated with increased morbidity and mortality and might be hypervirulent. Although subsequent work has raised some doubt as to whether ribotype 027 strains are hypervirulent, the strains are considered epidemic isolates that have caused severe …

A Prospective Study Of Periodontal Disease And Risk Of Gastric And Duodenal Ulcer In Male Health Professionals, Matthew R. Boylan, Hamed Khalili, Edward S. Huang, Dominique S. Michaud, Jacques Izard, Kaumudi J. Joshipura, Andrew T. Chan

Department of Food Science and Technology: Faculty Publications

Periodontal disease is characterized by microbial shifts within the oral cavity and chronic inflammation of the gingival tissue, and can lead to tooth loss. Several studies support an association between periodontal disease and risk of chronic systemic conditions, including vascular disease, chronic obstructive pulmonary disease, diabetes mellitus, and cancer, including gastric adenocarcinoma. These associations may be mediated by systemic inflammation, the immune response to periodontal infection, or direct invasion by pathogens. Previous studies of periodontal disease and risk of peptic ulcer have been limited by cross-sectional design, diagnoses that were not confirmed by medical record review, and a lack of …

Development And Evolution Of Risk Assessment For Food Allergens, Rene W. R. Crevel, Joseph Baumert, Athanasia Baka, Geert Houben, André C. Knulst, Astrid Kruizinga, Stefano Luccioli, Stephen L. Taylor, Charlotte B. Madsen

Department of Food Science and Technology: Faculty Publications

The need to assess the risk from food allergens derives directly from the need to manage effectively this food safety hazard. Work spanning the last two decades dispelled the initial thinking that food allergens were so unique that the risk they posed was not amenable to established risk assessment approaches and methodologies. Food allergens possess some unique characteristics, which make a simple safety assessment approach based on the establishment of absolute population thresholds inadequate. Dose distribution modelling of MEDs permitted the quantification of the risk of reaction at the population level and has been readily integrated with consumption and contamination …

Translating Reference Doses Into Allergen Management Practice: Challenges For Stakeholders, René W. R. Crevel, Joseph Baumert, Stefano Luccioli, Athanasia Baka, Sue Hattersley, Jonathan O.B. Hourihane, Stefan Ronsmans, Frans Timmermans, Rachel Ward, Yong-Joo Chung

Department of Food Science and Technology: Faculty Publications

Risk assessment describes the impact of a particular hazard as a function of dose and exposure. It forms the foundation of risk management and contributes to the overall decision-making process, but is not its endpoint. This paper outlines a risk analysis framework to underpin decision-making in the area of allergen cross-contact. Specifically, it identifies challenges relevant to each component of the risk analysis: risk assessment (data gaps and output interpretation); risk management (clear and realistic objectives); and risk communication (clear articulation of risk and benefit). Translation of the outputs from risk assessment models into risk management measures must be informed …

Repeated Cooking And Freezing Of Whole Wheat Flour Increases Resistant Starch With Beneficial Impacts On In Vitro Fecal Fermentation Properties, Jennifer A. Arcila, Devin J. Rose

Department of Food Science and Technology: Faculty Publications

Resistant starch (RS) has shown benefits to gastrointestinal health, but it is present in only small amounts in most grain-based foods. The purpose of this study was to increase RS in whole wheat flour to improve its potential health benefits. Zero to 7 cycles of cooking (20 min, boiling water) and freezing (−18 °C, 23 h) of whole wheat flour in water (1:15 %w/v) were performed. Increasing cooking–freezing cycles increased RS from 1.03 to 8.07% during in vitro starch digestion. During in vitro fecal fermentation, increasing cooking–freezing cycles increased short chain fatty acids, mainly propionate. Increases in butyrate were also …

Changes In School Connectedness And Deviant Peer Affiliation Among Sixth-Grade Students From High-Poverty Neighborhoods, Kathleen Moritz Rudasill, Kate Niehaus, Lisa J. Crockett, Christopher R. Rakes

Department of Educational Psychology: Faculty Publications

This longitudinal study examined associations between changes in School Connectedness and changes in Affiliation With Deviant Peers among students from high-poverty backgrounds during the year immediately following the transition to middle school. Sixth-graders (N = 328) attending two middle schools in a large school district completed measures of School Connectedness and Affiliation With Deviant Peers at three points across the year. Results from parallel process modeling showed that students’ reports of School Support significantly declined across the school year, School Support and Affiliation With Deviant Peers were negatively associated at the beginning of the school year, and students who reported …

Teacher Support Mediates Concurrent And Longitudinal Associations Between Temperament And Mild Depressive Symptoms In Sixth Grade, Kathleen Moritz Rudasill, Patrick Pössel, Stephanie Winkeljohn Black, Kate Niehaus

Department of Educational Psychology: Faculty Publications

The combination of changes occurring at the transition to middle school may be a catalyst for the onset of depressive symptoms, yet teacher support at this transition is protective. Research points to certain temperamental traits as risk factors for developing depressive symptoms. This study examines student reports of teacher support and teacher reports of student–teacher relationship (STR) quality as mediators of associations between child temperament (i.e. negative emotionality at age 4½ : and emotional reactivity in elementary grades) and depressive symptoms in sixth grade. Results indicate (a) negative emotionality predicted emotional reactivity and depressive symptoms; (b) emotional reactivity predicted depressive …

Traditional Alcohol Production And Use In Three Provinces In Vietnam: An Ethnographic Exploration Of Health Benefits And Risks, Bich Ngoc Luu, Thi Thieng Nguyen, Ian M. Newman

Department of Educational Psychology: Faculty Publications

Background: Gaps exist in knowledge about the production and use of traditional alcohols, particularly in Asia. This study adds new information about the nature, production and sale of traditional distilled spirit alcohol in Vietnam. Method: This was an ethnographic study of traditional distilled spirit alcohol production in rural areas of three provinces in Vietnam. Researchers interviewed more than 300 individuals and recorded responses to general open-ended questions about local alcohol production. Interviews were recorded, transcribed, and studied to discern what information about traditional alcohol was important to the speakers. Results: Methods of production followed long-held traditions. Participants listed both personal …

Efficacy Of The Getting Ready Intervention And The Role Of Parental Depression, Susan M. Sheridan, Lisa Knoche, Carolyn P. Edwards, Kevin A. Kupzyk, Brandy L. Clark, Elizabeth M. Kim

Department of Educational Psychology: Faculty Publications

This study reports the results of a randomized trial of a parent engagement intervention (the Getting Ready Project) on directly observed learning-related social behaviors of children from families of low-income in the context of parent-child interactions. The study explored the moderating effect of parental depression on intervention outcomes. Participants were 204 children and their parents, and 29 Head Start teachers. Semi-structured parent-child interaction tasks were videotaped two times annually over the course of two academic years. Observational codes of child behaviors included agency, persistence, activity level, positive affect, distractibility, and verbalizations. Controlling for gender and disability concerns, relative to children …

Biomechanical Strain As A Trigger For Pore Formation In Schlemm’S Canal Endothelial Cells, Sietse T. Braakman, Ryan M. Pedrigi, A. Thomas Read, James A. E. Smith, W. Daniel Stamer, C. Ross Ethier, Darryl R. Overby

Department of Mechanical and Materials Engineering: Faculty Publications

The bulk of aqueous humor passing through the conventional outflow pathway must cross the inner wall endothelium of Schlemm’s canal (SC), likely through micron-sized transendothelial pores. SC pore density is reduced in glaucoma, possibly contributing to obstructed aqueous humor outflow and elevated intraocular pressure (IOP). Little is known about the mechanisms of pore formation; however, pores are often observed near dome-like cellular outpouchings known as giant vacuoles (GVs) where significant biomechanical strain acts on SC cells. We hypothesize that biomechanical strain triggers pore formation in SC cells. To test this hypothesis, primary human SC cells were isolated from three non-glaucomatous …

Altered Mechanobiology Of Schlemm’S Canal Endothelial Cells In Glaucoma, Darryl R. Overby, Enhua H. Zhou, Rocio Vargas-Pinto, Ryan M. Pedrigi, Rudolf Fuchshofer, Sietse T. Braakman, Ritika Gupta, Kristin M. Perkumas, Joesph M. Sherwood, Amir Vahabikashi, Quynh Dang, Jae Hun Kim, C. Ross Ethier, W. Daniel Stamer, Jeffrey J. Fredberg, Mark Johnson

Department of Mechanical and Materials Engineering: Faculty Publications

Increased flow resistance is responsible for the elevated intraocular pressure characteristic of glaucoma, but the cause of this resistance increase is not known. We tested the hypothesis that altered biomechanical behavior of Schlemm’s canal (SC) cells contributes to this dysfunction. We used atomic force microscopy, optical magnetic twisting cytometry, and a unique cell perfusion apparatus to examine cultured endothelial cells isolated from the inner wall of SC of healthy and glaucomatous human eyes. Here we establish the existence of a reduced tendency for pore formation in the glaucomatous SC cell—likely accounting for increased outflow resistance—that positively correlates with elevated subcortical …

How Hot Is Too Hot? Live-Trapped Gray Wolf Rectal Temperatures And 1-Year Survival, Shannon M. Barber-Meyer, L. David Mech

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

The ability of physically restrained and anesthetized wolves to thermoregulate is lessened and could lead to reduced survival, yet no information is available about this subject. Therefore, we analyzed rectal temperatures related to survival 1 year post-capture from 173 adult (non-pup) gray wolves (Canis lupus) captured in modified foot-hold traps for radiocollaring during June–August, 1988–2011, in the Superior National Forest of northeastern Minnesota, USA. The maximum observed rectal temperature (“maxtemp,” ˚F, ˚C) in each wolf during capture (x=104.0, 40.0; SD=2.0, 1.1;min.=95.9, 35.5; max.=108, 42.2) was not a significant predictor of survival to 1 year post-capture. Although no weather …

Successes And Challenges From Formation To Implementation Of Eleven Broad-Extent Conservation Programs, Erik A. Beever, Brady J. Mattsson, Matthew J. Germino, Max Post Van Der Burg, John B. Bradford, Mark W. Brunson

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Integration of conservation partnerships across geographic, biological, and administrative boundaries is increasingly relevant because drivers of change, such as climate shifts, transcend these boundaries. We explored successes and challenges of established conservation programs that span multiple watersheds and consider both social and ecological concerns. We asked representatives from a diverse set of 11 broadextent conservation partnerships in 29 countries 17 questions that pertained to launching and maintaining partnerships for broad-extent conservation, specifying ultimate management objectives, and implementation and learning. Partnerships invested more funds in implementing conservation actions than any other aspect of conservation, and a program’s context (geographic extent, United …

Kaposi`S Sarcoma Associated Herpesvirus Infection Among Female Sex Workers And General Population Women In Shanghai, China: A Cross-Sectional Study, Tiejun Zhang, Ying Yang, Feng Yu, Yanping Zhao, Feifei Lin, Veenu Minhas, Charles Wood, N. He

Nebraska Center for Virology: Faculty Publications

Background: Limited information on epidemiologic patterns of KSHV, with none focusing on heterosexual transmission, is available in mainland China. To clarify this, a cross-sectional study was conducted among a group of female sex workers (FSW) and general population women (GW) in Shanghai, China.

Methods: An anonymous questionnaire interview was administrated among 600 FSW and 600 GW. Blood samples were collected and tested for antibodies to KSHV, HSV-2, HIV, syphilis and HBsAg. Correlates of KSHV and HSV-2 were examined using multiple logistic regression analysis.

Results: None of the study participants were tested positive for HIV. The seroprevalence of …

Bovine Herpesvirus 1 Productive Infection Stimulates Inflammosome Formation And Caspase 1 Activity, Jianlin Wang, Jeffrey Alexander, Matthew S. Wiebe, Clinton J. Jones

Nebraska Center for Virology: Faculty Publications

Bovine herpesvirus 1 (BoHV-1), a significant viral pathogen of cattle, causes inflammation in affected tissue during acute infection. Consequently, we tested whether productively infected bovine cells stimulate inflammasome formation. Expression of two components required for inflammasome formation, the DNA sensor IFI16 (gamma-interferon-inducible protein 16) and NLRP3 (NOD-like receptor family, pyrin domain containing 3), were induced in bovine kidney cells by eight hours after infection. IFI16 was detected in punctate granules localized to the cytoplasm and nucleus. During productive infection, more than ten times more cells were caspase 1 positive, which is activated following inflammasome formation. Two caspase 1 inhibitors had …

Cell- And Virus-Mediated Regulation Of The Barrier-To-Autointegration Factor’S Phosphorylation State Controls Its Dna Binding, Dimerization, Subcellular Localization, And Antipoxviral Activity, Augusta Jamin, April Wicklund, Matthew S. Wiebe

Nebraska Center for Virology: Faculty Publications

Barrier-to-autointegration factor (BAF) is a DNA binding protein with multiple cellular functions, including the ability to act as a potent defense against vaccinia virus infection. This antiviral function involves BAF’s ability to condense double-stranded DNA and subsequently prevent viral DNA replication. In recent years, it has become increasingly evident that dynamic phosphorylation involving the vaccinia virus B1 kinase and cellular enzymes is likely a key regulator of multiple BAF functions; however, the precise mechanisms are poorly understood. Here we analyzed how phosphorylation impacts BAF’s DNA binding, subcellular localization, dimerization, and antipoxviral activity through the characterization of BAF phosphomimetic and unphosphorylatable …