Digital Commons Network^™

Foraminiferal Assemblages On Sediment And Reef Rubble At Conch Reef, Florida Usa, Christy Michelle Stephenson

USF Tampa Graduate Theses and Dissertations

Benthic foraminiferal assemblages are widely used to interpret responses of the benthic communities to environmental stresses. This study compares epibiotic foraminiferal assemblages, collected from reef rubble, with those from reef sediments. The study site, Conch Reef, is the site of the Aquarius Underwater Habitat research facility and includes protected areas used only for scientific studies. Although a number of studies have enumerated foraminiferal taxa from the Florida reef tract, no projects have focused on the assemblages that occur at Conch Reef.

Sediment and reef rubbles samples were collected via SCUBA from a depth range of 13 to 26 m during …

Sisters In Arms: A Case Study Of The Experiences Of Women Warriors In The United States Military, Carmen Teresa Stein-Mccormick

USF Tampa Graduate Theses and Dissertations

Presently there are few studies that describe the current experiences of women warriors relative to issues such as sexual hostility, sexual harassment, and other uncommon experiences during their military careers. Very little is known about how being a woman in a male-dominated military may affect women warriors' choices between making the military a career or returning to civilian life. With better understanding of women warriors' military experiences, mental health professionals, educators, and other human services professionals may have a better understanding of the issues that may affect women in the military. To date there are limited studies that have examined …

Indicators Of Early Adult And Current Personality In Parkinson's Disease, Kelly Sullivan

USF Tampa Graduate Theses and Dissertations

Introduction: Previous epidemiologic studies suggest that the personality of Parkinson's disease (PD) patients differs from that of controls, and laboratory evidence supports a potential common pathophysiology of personality traits and PD. One nested case-control study found that PD cases were significantly more anxious than controls before the clinical onset of the disease, and additional data suggest that certain occupations may be risk factors for the disease. Additionally, the latent period that precedes the onset of motor symptoms of PD is unknown.

Objectives: The objectives of this study were to evaluate the association of PD with objective indicators of current and …

Parent Response To Adolescent Self-Injurious Behavior: A Collective Case Study, Kylee Sue Tuls

USF Tampa Graduate Theses and Dissertations

Research in the area of self-injurious behaviors and the family context is still emerging. The majority of research available is quantitative in nature. The limited qualitative research available in this area has been conducted outside of the United States. A collective case study was conducted with four parents with an adolescent that had been admitted to an inpatient psychiatric residential facility with a presenting problem of self-injurious behavior. The purpose of this study was to gain an in-depth, qualitative understanding of the parent perspective and comprehension of adolescent self-injurious behavior including the parents' ideas on how the parent-child relationship or …

The Role Of Program Climate And Socialization In The Retention Of Engineering Undergraduates, Heather Elizabeth Ureksoy

USF Tampa Graduate Theses and Dissertations

Increasing women's participation in the fields of science, technology, engineering and mathematics (STEM) can promote a healthy economy by ensuring a diverse and well-qualified STEM workforce, not only in the quantity of females in the workforce, but diversity in thinking and creativity. It will also send a positive message to young women about the breadth of educational opportunities and career choices they have available to them. However, women continue to participate in engineering education in a far lower rate than men. Attracting and retaining female students has become a challenging problem for the academic engineering community. In this study, a …

A Comparison Of Latina Women In Centeringpregnancy And Individual Prenatal Care, Tara E. Trudnak

USF Tampa Graduate Theses and Dissertations

CenteringPregnancy is a model of group prenatal care that replaces routine, individual prenatal care. The program brings women together into small groups to receive their care and prenatal education, and is based on three components: risk assessment, education, and support. The model is client-centered, designed to empower pregnant women and support persons, and involves the woman in small group discussions of 8-10 other women of similar gestational age. The group discussions provide support, help women educate each other, and invoke self-monitoring. Currently, there have been few publications that closely examined maternal weight and obesity and associated outcomes in women involved …

The Role Of Brca1 Domains And Motifs In Tumor Suppression, Aneliya Velkova

USF Tampa Graduate Theses and Dissertations

Individuals that carry deleterious mutations in the breast and ovarian cancer susceptibility gene 1 (BRCA1) have much more elevated risk to develop breast and/or ovarian cancer than the individuals from the general population. The BRCA1 gene product has been implicated in several aspects of the DNA damage response, but its biochemical function in these processes has remained elusive. In order to probe BRCA1 functions we conducted a yeast two-hybrid screening to identify interacting partners to a conserved motif (Motif 6) in the central region of BRCA1. In this dissertation, we report the identification of the actin-binding protein Filamin A (FLNA) …

Probing Molecules In Confined Space, Carissa Marie Vetromile

USF Tampa Graduate Theses and Dissertations

Despite the plethora of information regarding cellular crowding and its importance on modulating protein function the effects of confinement on biological molecules are often overlooked when investigating their physiological function. Recently however, the encapsulation of biomolecules in solid state matrices (NafionTM, sol-gels, zirconium phosphate,etc.) has increased in importance as a method for examining protein conformation and dynamics in confined space as well as novel applications in biotechnology. Biotechnological applications include, but are not limited to, bioremediation, biosensors, biocatalysts, etc. In order to better utilize solid state materials as substrates for biological molecules an understanding of the effects of encapsulation on …

Modeling Direct Runoff Hydrographs With The Surge Function, Denis Voytenko

USF Tampa Graduate Theses and Dissertations

A surge function is a mathematical function of the form f(x)=ax^pe^-bx. We simplify the surge function by holding p constant at 1 and investigate the simplified form as a potential model to represent the full peak of a stream discharge hydrograph. The previously studied Weibull and gamma distributions are included for comparison. We develop an analysis algorithm which produces the best-fit parameters for every peak for each model function, and we process the data with a MATLAB script that uses spectral analysis to filter year-long, 15-minute, stream-discharge data sets. The filtering is necessary to locate the …

Life And Death Journeys: Medical Travel, Cancer, And Children In Argentina, Cecilia Vindrola Padros

USF Tampa Graduate Theses and Dissertations

Recent studies on the Argentine public health system have demonstrated that the lack of medical resources in different parts of the country force pediatric oncology patients and their family members to travel to Buenos Aires in order to access care. This internal migration poses difficulties for these families as travel and resettlement are expensive, lead to the separation of family members, and interrupt the child's schooling. This dissertation was designed to document the everyday life experiences of traveling families in order to understand the barriers they faced while attempting to access medical treatment and the strategies they used to surmount …

Dynamics Of Stony Coral Assemblages On Patch Reefs Of The Upper Florida Reef Tract, Including Biscayne National Park, Amy Wallace

USF Tampa Graduate Theses and Dissertations

The patch reefs located in Biscayne National Park (BNP) are some of the most northern reefs of the Florida reef system. The focus of my study is seven patch reefs that were first surveyed annually between 1977 and 1981, revealing 8% - 28% cover by scleractinian corals. An assessment of BNP patch reefs completed in 2000 reported that coral cover had decreased to approximately 0.4% - 10%. The once dominant species in the Florida reef tract, Acropora palmata and A. cervicornis, have rapidly declined over time and were not found in any transects during the 2000 survey.

This study is …

School Psychologists' Communication And Collaboration With Community-Based Mental Health Professionals, Audra St. John Walsh

USF Tampa Graduate Theses and Dissertations

Although collaboration between school psychologists and community-based mental health professionals is essential in the provision of comprehensive and effective mental health services for youth with intensive mental health needs, youth may not receive the full benefit of these coordinated efforts, as collaboration may not occur as often as it should. This study investigated the frequency of communication and collaboration between school- and community-based professionals, the purposes and methods of communication, and the benefits and barriers to collaboration. Survey data from 80 members of the Florida Association of School Psychologists were collected and analyzed. Forty-three percent of school psychologists reported communicating …

Assessment Of Fertility Potential In Bottlenose Dolphins (Tursiops Truncatus): An Elisa-Based Biomarker Analysis, Leslie Schwierzke Wade

USF Tampa Graduate Theses and Dissertations

As apex predators in coastal systems, bottlenose dolphins (Tursiops truncatus) are susceptible to persistent organic pollutant (POP) accumulation and retention over time, which has prompted continued interest in understanding the extent to which contaminant body burdens or other stressors are sufficient to cause adverse sublethal effects on energetic fitness, immune function, or reproduction. Increasing our knowledge of reproductive endocrinology in bottlenose dolphins may provide insight into changes in reproductive rates, thereby expanding the capacity to assess conservation status. This study used the Enzyme-Linked ImmunoSorbent Assay (ELISA) technique to examine peptide fertility hormones [inhibin A, inhibin B and anti-Müllerian …

Crystal Engineering Of Multiple Component Crystal Forms Of Active Pharmaceutical Ingredients, David Rudy Weyna

USF Tampa Graduate Theses and Dissertations

Enhancing the physicochemical properties of solid-state materials through crystal engineering enables optimization of these materials without covalent modification. Cocrystals have become a reliable means to generate novel crystalline forms with multiple components and they exhibit different physicochemical properties compared to the individual components. This dissertation exemplifies methodologies to generate cocrystals of active pharmaceutical ingredients (API's) based upon knowledge of supramolecular interactions (supramolecular synthons), while focusing on enhanced delivery through in vitro and in vivo processes with both salts and cocrystals respectively.

The utility of mechanochemistry involving small amounts of an appropriate solvent, or solvent drop grinding (SDG), has been shown …

Statistical Models For Environmental And Health Sciences, Yong Xu

USF Tampa Graduate Theses and Dissertations

Statistical analysis and modeling are useful for understanding the behavior of different phenomena. In this study we will focus on two areas of applications: Global warming and cancer research. Global Warming is one of the major environmental challenge people face nowadays and cancer is one of the major health problem that people need to solve.

For Global Warming, we are interest to do research on two major contributable variables: Carbon dioxide (CO2) and atmosphere temperature. We will model carbon dioxide in the atmosphere data with a system of differential equations. We will develop a differential equation for each of six …

Sex And The Seas: Gene Transfer Agents, Elizabeth Young

USF Tampa Graduate Theses and Dissertations

Gene Transfer Agents (GTAs) are phage-like pthesiss that are produced by many alpha proteobacteria in late stationary growth phase and are capable of transferring chromosomal genes (termed "constitutive transduction"). Examination of alpha proteobacterial genomic sequences indicated widespread occurrence of GTA-like elements. The goal of this study was to investigate gene transfer potential of GTAs of marine alpha proteobacteria in culture as well as in natural marine environments. Another goal was to determine the potential of bacterial symbionts from zooxanthellae and coral to genetically transfer beneficial properties between symbionts. Ruegeria mobilis (ID 45A6) was isolated from cultures of the coral endosymbiotic …

Potential Habitat Of Acropora Spp. On Florida Reefs, Katherine Wirt

USF Tampa Graduate Theses and Dissertations

Elkhorn and Staghorn corals (Acropora palmata, A. cervicornis) were listed as threatened species under the Endangered Species Act (ESA) in 2005. The threatened status of these species is unprecedented given the vital role they historically played as major constructors of western Atlantic and Caribbean coral reefs. The goal of my study was to evaluate the current extent of habitat of the two species using a database of reported in situ observations. From these observations, potential habitat maps were produced based on benthic substrata and depth parameters throughout the Florida reef tract using GIS software. Locations of 99% of …

A Mixed Method Study On The Peripartum Experience And Postpartum Effects Of Emergency Hysterectomy Due To Postpartum Hemorrhage, Cara De La Cruz

USF Tampa Graduate Theses and Dissertations

Background: Little is known about the experience and psychological outcomes for women who experience emergency peripartum hysterectomy (EPH). The objective of this study was to explore women's experiences of EPH and to determine if women who experience EPH were more likely to experience mental health sequelae.

Methods: This mixed method design involved a quantitative and a qualitative phase. The quantitative phase used a retrospective cohort design. Women were sampled through on-line communities, including an EPH support group, and a larger website for mothers. Women completed on-line surveys covering sociodemographic, obstetric/gynecological/ and psychiatric information, including screens for depression and Post-Traumatic Stress …

Protein Modification By Arginylation, Hideko Kaji, Akira Kaji

Department of Biochemistry and Molecular Biology Faculty Papers

The modification of protein by arginine catalyzed by arginyltransferases (ATE1) described by the Kashina group in this issue shows that arginylation of protein occurs widely in biology and is being recognized as a key regulatory reaction such as phosphorylation of proteins (Wang et al., 2011).

Mitochondrial Genome Sequence Analysis: A Custom Bioinformatics Pipeline Substantially Improves Affymetrix Mitochip V2.0 Call Rate And Accuracy., Hongbo M Xie, Juan C Perin, Theodore G Schurr, Matthew C Dulik, Sergey I Zhadanov, Joseph A Baur, Michael P King, Emily Place, Colleen Clarke, Michael Grauer, Jonathan Schug, Avni Santani, Anthony Albano, Cecilia Kim, Vincent Procaccio, Hakon Hakonarson, Xiaowu Gai, Marni J Falk

Department of Biochemistry and Molecular Biology Faculty Papers

BACKGROUND: Mitochondrial genome sequence analysis is critical to the diagnostic evaluation of mitochondrial disease. Existing methodologies differ widely in throughput, complexity, cost efficiency, and sensitivity of heteroplasmy detection. Affymetrix MitoChip v2.0, which uses a sequencing-by-genotyping technology, allows potentially accurate and high-throughput sequencing of the entire human mitochondrial genome to be completed in a cost-effective fashion. However, the relatively low call rate achieved using existing software tools has limited the wide adoption of this platform for either clinical or research applications. Here, we report the design and development of a custom bioinformatics software pipeline that achieves a much improved call rate …

Delayed-Bang Approach Towards More Sustainable Critical Infrastructure Risk Management, C. Ariel Pinto, Michael K. Mcshane, Abhishek S. Pathak

Finance Faculty Publications

This article describes the Delayed Bang Approach for determining the value of risk management alternatives in critical infrastructure security. The discussion includes (1) the need for sustainable risk management (2) the importance of time valuation in evaluating competing loss prevention and loss reduction alternatives, (3) the convergence of deterministic engineering economics, survivability analysis, and probabilistic analysis, and (4) hypothetical examples of the Delayed-Bang Approach and significance towards more sustainable risk management.

Limiting Factors For Crayfish And Finfish In Acidic Coal Pit Lake, C. D. Mccullough, Mark Lund

Research outputs 2011

World-wide, open-cut mining operations often leave pit lakes at closure. The Collie Lake District in south-west Australia has 13 pit lakes from open-cut coal extraction, with more expected. Many lakes may offer beneficial end uses as fisheries habitat for biodiversity or for recreational species. However, pit lakes may have degraded water quality due to Acid and Metalliferous Drainage (AMD). A literature review and survey for marron (endemic crayfish of biodiversity and recreational value) and fin-fish (of only biodiversity value) found that crayfish were likely more limited by habitat and food availability, and fin-fish by water quality. Management of these mild …

Model-Based Investigations Of Acidity Sources And Sinks Of A Pit Lake In Western Australia, Mike Mueller, Katja Eulitz, C. D. Mccullough, Mark Lund

Research outputs 2011

Lake Kepwari is a rehabilitated lake in the Collie Basin lignite mining area in Western Australia. The water quality of Lake Kepwari was modeled with the pit lake hydrodynamic and water quality model PITLAKQ. Based on a hydrodynamically validated model, water quality scenarios were used to quantify the sensitivity of different acidity sources including groundwater exchange, surface runoff and erosion, providing new insights into the system. The technique of monthly aggregation of all sources and sinks of acidity, based on detailed model output, provided the basis for useful conclusions. Model results suggest a new focus of field investigations to improve …

Evaluating The Factors Limiting Algal Biomass In Acidic Pit Lakes Of The Collie Lake District, Western Australia, Naresh Radhakrishnan, C. D. Mccullough, Mark Lund, Santiago Larranaga Arrizabalaga

Research outputs 2011

Acidic pit lakes often have elevated metal concentrations, very low nutrient concentrations and very low algal primary productivity. A microcosm experiment was performed to identify the main limiting factor(s) for algal biomass. Nutrients (N, P and C) were added in all possible combinations to pit lake water in the presence or absence of pit lake sediment. Microcosms without sediment showed higher chlorophyll a concentrations compared to the treatments with sediment. Microcosms where nitrogen and phosphorus were added showed highest chlorophyll a concentrations. Results suggest that algal biomass in pit lakes may be primarily limited by low nitrogen and phosphorus concentrations.

Potential Of Sewage And Green Waste For Acidic Pit Lake Bioremediation, Naresh Radhakrishnan, C. D. Mccullough, Mark Lund

Research outputs 2011

Bacterial sulfate reduction-based bioremediation was trialled in an acidic pit lake, divided into two sections by an earth wall. Sewage and green waste was added to the smallest section, while the other was kept untreated as a control. Bioremediation initially increased the pH of the hypolimnion of the treatment lake but after 12 months the pH suddenly returned to pre-treatment levels. This proved to be only temporary and pH bounced quickly back to previous highs. The pH decreases appeared to be associated with heavy rainfall events. These rainfall events affected the bioremediation by mixing the lake and increasing acidity inputs …

The Evangelization Of Secular Young Adults In South Korea: Effective Principles For Conversion Growth Among Protestant Churches, Sang Woo Cho

ATS Dissertations

No abstract provided.

Quantitative Approaches In Climate Change Ecology, Christopher J. Brown, David S. Schoeman, William J. Sydeman, Keith Brander, Lauren B. Buckley, Michael Burrows, Carlos M. Duarte, Pippa J. Moore, John M. Pandolfi, Elvira Poloczanska, William Venables, Anthony J. Richardson

Research outputs 2011

Contemporary impacts of anthropogenic climate change on ecosystems are increasingly being recognized. Documenting the extent of these impacts requires quantitative tools for analyses of ecological observations to distinguish climate impacts in noisy data and to understand interactions between climate variability and other drivers of change. To assist the development of reliable statistical approaches, we review the marine climate change literature and provide suggestions for quantitative approaches in climate change ecology. We compiled 267 peer-reviewed articles that examined relationships between climate change and marine ecological variables. Of the articles with time series data (n = 186), 75% used statistics to test …

Assessing The Influence Of Consanguinity On Congenital Heart Disease, Alan H. Bittles

Research outputs 2011

Numerous articles have been published linking consanguineous marriage to an elevated prevalence of congenital heart disease, with ventricular septal defects and atrial septal defects the most commonly cited disorders. While initially persuasive, on closer examination many of these studies have fundamental shortcomings in their design and in the recruitment of study subjects and controls. Improved matching of cases and controls, to include recognition of the long-established community boundaries within which most marriages are contracted, and the assessment of consanguinity within specific levels and types of marital union would improve and help to focus the study outcomes. At the same time, …

Mother Country: Reproductive Tourism In The Age Of Globalization, Lauren Jade Martin

Dissertations, Theses, and Capstone Projects

Mother Country is a multi-sited, qualitative study of the United States fertility industry. I analyze the industry in two dimensions: as a particularly American institution and nascent profession, and as a destination for "reproductive tourism." The United States fertility industry, buttressed by lax federal regulation, free market principles, and high technology resources, is organized to benefit certain classes of American citizens and foreign nationals in their quest to have children. As such, the United States has become a prime destination for people seeking assisted fertility services such as commercial surrogacy, egg donation, and sex selection, which are unavailable, inaccessible, or …

Biosorption Of Heavy Metals Using Water Hyacinth Eichhornia Crassipes (Mart.) Solms-Laubach: Adsorption Properties And Technological Assessment, Davis Anzeze Amboga

All Master’s Theses

The adsorption of heavy metal ions (Cd2+), Cu2+), Pb2+) and Zn2+) by untreated water hyacinth Eichhornia crassipes obtained from Lake Victoria, Kenya was investigated under batch mode. A The effects of sample part, particle size, contact time, solution pH, and temperature, shaking speed, adsorbent dosage and initial metal ion concentration of aqueous solutions were investigated. The roots showed highest ability for the uptake of heavy metals (Cu, Zn, Cd and Pb) from aqueous solutions, therefore were used. for all subsequent sorption studies in this research. Maximum removal of metal ions took place at a pH of 4-6. The adsorption of …