Digital Commons Network^™

Rethinking Biodiversity Conservation Effectiveness And Evaluation In The National Protected Areas Systems Of Tropical Islands: The Case Of Jamaica And The Dominican Republic, Suzanne Mae Camille Davis

Theses and Dissertations (Comprehensive)

Island conservation theory and practice with regard to conservation of tropical terrestrial biodiversity in protected areas systems has yet to be adequately addressed in conservation literature. This knowledge gap is identified as a key contributor to the adoption of scientific principles for in situ biodiversity conservation, and “universal” conservation and protected area management paradigms that are unsuitable for island contexts and geographical scale. The underlying assumption is that “universal” concepts of biodiversity conservation, protected areas management, and evaluation of their effectiveness are transferable to the ecological and socio-economic contexts of tropical islands. The expected outcome of this knowledge transfer is …

Computational Structural Modelling Of Coronary Stent Deployment: A Review, David Martin, Fergal Boyle

Articles

The finite element (FE) method is a powerful investigative tool in the field of biomedical engineering, particularly in the analysis of medical devices such as coronary stents whose performance is extremely difficult to evaluate in vivo. In recent years, a number of FE studies have been carried out to simulate the deployment of coronary stents, and the results of these studies have been utilised to assess and optimise the performance of these devices. The aim of this paper is to provide a thorough review of the state-of-the-art research in this area, discussing the aims, methods and conclusions drawn from a …

Structure And Content Semantic Similarity Detection Of Extensible Markup Language Documents Using Keys, Waraporn Viyanon

Doctoral Dissertations

"XML (eXtensible Mark-up Language) has become the fundamental standard for efficient data management and exchange. Due to the widespread use of XML for describing and exchanging data on the web, XML-based comparison is central issues in database management and information retrieval. In fact, although many heterogeneous XML sources have similar content, they may be described using different tag names and structures. This work proposes a series of algorithms for detection of structural and content changes among XML data. The first is an algorithm called XDoI (XML Data Integration Based on Content and Structure Similarity Using Keys) that clusters XML documents …

The Stereochemistry Of Selected Supramolecular Complexes Of Cucurbiturils And The Effect Of Homogeneous Equilibria And Electron Transfer Of The Guest, Arumugam Thangavel

Doctoral Dissertations

"From a practical perspective, host-guest complexes are vehicles for understanding and using supramolecular interactions for purposeful function in sensors, molecular machines and switches, while from a fundamental perspective they may lead to novel supramolecular protection schemes in basic organic reactions. This dissertation examines the interactions of cucurbiturils as barrel-shaped hosts, exhibiting a hydrophobic cavity, with substituted benzoylpyrydinium, phenypyrylium, and diazaanthraquinonediium cations as guests. In water, N-methyl-4-(p-substituted benzoyl)pyridinium cations exist in equilibrium with their hydrated forms (gem-diols), whose concentrations depend on the para substituent. In the presence of cucurbit7uril (CB[7]), the benzoyl group shows a preference for the CB[7] cavity, and …

Ground Penetrating Radar Investigations In Upper Kama Potash Mines, Oleg N. Kovin

Doctoral Dissertations

"An understanding of the structure and state of the rock mass surrounding underground openings in the potash mines is critically important for safe mining, planning the methods of extraction of an orebody, and preventing the influx of ground water. Continuous common offset ground penetrating radar (GPR) data were acquired in the potash mine operated by the Joint Stock Company (JSC) "Silvinit" (Russia) as part of an investigation of both pre-existing fractures exposed by mine workings and other anomalous geological structures. During the course of GPR investigation, the electrical properties of salt-bearing units were determined, site-specific data acquisition techniques and object-oriented …

Three-Body Dynamics In Single Ionization Of Atomic Hydrogen By 75 Kev Proton Impact, Aaron C. Laforge

Doctoral Dissertations

"Doubly differential cross sections (DDCS) for single ionization of atomic hydrogen by 75 keV proton impact have been measured as a function of the projectile scattering angle and energy loss. This pure three-body collision system represents a fundamental test case for the study of the reaction dynamics in few-body systems. A comparison between theory and experiment reveals that three-body dynamics is important at all scattering angles, and that an accurate description of the role of the projectile-target nucleus interaction as well as the second order projectile-electron interaction remains a major challenge to theory. However, progress is being made in understanding …

Governing The Presidential Nomination Commons, Brigham Daniels

Faculty Scholarship

States jockeying to hold primaries and caucuses as early as possible has become the central theme of the presidential primary system. While the trend of racing to vote is not new, it has increased alarmingly. In 2008, more than half the states held contests by the first week of February. This free-for-all hurts the democratic process by encouraging uninformed voting, emphasizing the role of money in campaigns, and pressing candidates to rely on sound-bite campaigning. Because the presidential nomination is one of the most important decisions left to voters in the United States, this problem is well-recognized. It is also …

Truth And Consequences: Mitt Romney, Proposition 8, And Public Reason, Frederick Mark Gedicks

Faculty Scholarship

Although formal religious tests for federal office are constitutionally prohibited, they have long been fact of political life in presidential elections. John Kennedy remains the only nonProtestant ever elected President. The "Judeo-Christian tradition" notwithstanding, no major party has ever nominated a Jew for president - let alone a Buddhist, Hindu, Mormon, Muslim, or unbeliever.

Against this electoral history, it was perhaps predictable that mainstream Christian commentators would feel free to legitimate religious attacks on Mitt Romney during the Republican presidential primaries on the ground that Mormonism is a "false" religion. Ironically, however, the Mormon church periodically intervenes in initiative and …

Serine- And Arginine-Rich Proteins 55 And 75 (Srp55 And Srp75) Induce Production Of Hiv-1 Vpr Mrna By Inhibiting The 5′-Splice Site Of Exon 3, Anna Tranell, Eva Maria Fenyö, Stefan Schwartz

Articles

HIV-1 non-coding exon 3 can either be spliced to exons 4, 4a, 4b, 4c, and 5 to generate tat, rev, and nef mRNAs or remain unspliced to produce the 13a7 vpr mRNA. Here we show that serine- and arginine-rich proteins 55 and 75 (SRp55 and SRp75) inhibit splicing from the 5′-splice site of exon 3 thereby causing an accumulation of the partially unspliced 13a7 vpr mRNA. In contrast, serine- and arginine-rich protein 40 (SRp40) induces splicing from exon 3 to exon 4, thereby promoting the production of the 1347 tat mRNA. We demonstrate that SRp55 stimulates vpr mRNA production by …

Detection And Estimation Of Image Blur, Harish Narayanan Ramakrishnan

Masters Theses

"The airborne imagery consisting of infrared (IR) and multispectral (MSI) images collected in 2009 under airborne mine and minefield detection program by Night Vision and Electronic Sensors Directorate (NVESD) was found to be severely blurred due to relative motion between the camera and the object and some of them with defocus blurs due to various reasons. Automated detection of blur due to motion and defocus blurs and the estimation of blur like point spread function for severely degraded images is an important task for processing and detection in such airborne imagery. Although several full reference and reduced reference methods are …

Evaluation Of Metal Detection Audio Alert Signals Of An/Pss-14 By Means Of Real Time Visualization, Sandesh Srikantaiah Chandrashekar

Masters Theses

"The sweep arm of the AN/PSS-14 Landmine Detector attached to an independent visualization device will transform the AN/PSS-14 into a hand-held data acquisition system for conversion of real time MD and GPR audio alert signals into captured visual trace displays on an on-board PDA computer screen so that momentary sounds of millisecond durations can be captured and displayed for visual scrutiny and interpretation by analytical on-board data processing procedures. This is a part of a two-man team that is developing a visual data adapter for the AN/PSS-14 Landmine Detector where the current thesis is concentrating only on MD audio alerts. …

Gpu Based Processing For Airborne Detection, Dheeraj Singiresu

Masters Theses

"Onboard real-time processing is highly desirable in airborne detection applications. As the data processing involved here is computationally expensive, typically high power multi-rack system is required to achieve real-time detection. Use of such hardware is often not feasible in an airborne application due to space, power and weight constraints. In this thesis, different computing architectures suitable for real-time onboard processing are compared in terms of computation speed, watts/GFLOPS, and weight/GFLOPS. A brief description of the modem GPU architecture and the current GPGPU technology is provided. GPU implementations of some computationally expensive image processing applications such as band-to-band registration for Multi …

Seismic Interpretation And Reservoir Characterization Of The Middle Frio Formation In The Stratton Field Gulf Coast Basin Of South Texas Using Three-Dimensional Seismic And Well Log Data, Uchenna H. Aboaja

Masters Theses

"The Stratton field is a large mature gas field located between Nueces County and Kleberg County in the northwest Gulf Coast Basin of south Texas. The Oligocene middle Frio Formation is one of the major progradational units within the Stratton field. It is characterized by rapid deposition and high subsidence rates that create complex internal facies architecture. The reservoir facies architecture of the middle Frio Formation is described as channel-fill deposits, crevasses-splay deposits, and floodplain mudstones. Previous two-dimensional seismic studies indicate some level of compartmentalization. Three-dimensional seismic and well log data provided by the Bureau of Economic Geology at the …

Energy-Efficient Task-Scheduling And Networking Protocols For Secure Wireless Networks, Sandeep Kolli

Masters Theses

"The performance of wireless networks is dependent on a number of factors including the available energy, energy-efficiency, data processing delay, transmission delay, routing decisions, security overhead, etc. Traditionally, due to limited resources, nodes were tasked with only collecting measurements and sending them to a base station or central unit for processing. With increased capabilities of microprocessors the data processing is pushed more toward network and its more capable nodes. This thesis focuses to virtualize the processing resources of the entire network and dynamically distribute processing steps along the routing path while optimizing performance. Additionally, a new multi-key encryption (MKE) scheme …

Spectroscopic And Chemometric Approaches To Radiobiological Analyses, Aidan Meade, Hugh Byrne, Fiona Lyng

Articles

No abstract provided.

Functional And Pathological Analysis Of Biological Systems Using Vibrational Spectroscopy With Chemometric And Heuristic Approaches, Aidan Meade, Colin Clarke, Franck Bonnier, Kelvin W. Poon, Amaya Garcia, Peter Knief, Kamila Ostrowska, Lorenzo Salford, Haq Nawaz, Fiona Lyng, Hugh Byrne

Articles

Vibrational spectroscopy (Raman and FTIR microspectroscopy) is an attractive modality for the analysis of biological samples since it provides a complete non-invasive acquisition of the biochemical fingerprint of the sample. Studies in our laboratory have applied vibrational spectroscopy to the analysis of biological function in response to external agents (chemotherapeutic drugs, ionising radiation, nanoparticles), together with studies of the pathology of tissue (skin and cervix) in health and disease. Genetic algorithms have been used to optimize spectral treatments in tandem with the analysis of the data (using generalized regression neural networks (GRNN), artificial neural networks (ANN), partial least squares modelling …

Studies Of Chemical Fixation Effects In Human Cell Lines Using Raman Microspectroscopy, Aidan Meade, Colin Clarke, Florence Draux, Ganesh Sockalingum, Michel Manfait, Fiona Lyng, Hugh Byrne

Articles

The in vitro study of cellular species using Raman spectroscopy has proven a powerful non-invasive modality for the analysis of cell constituents and processes. This work uses micro-Raman spectroscopy to study the chemical fixation mechanism in three human cell lines (normal skin, normal bronchial epithelium, and lung adenocarcinoma) employing fixatives that preferentially preserve proteins (formalin), and nucleic acids (Carnoy’s fixative and methanol–acetic acid). Spectral differences between the mean live cell spectra and fixed cell spectra together with principal components analysis (PCA), and clustering techniques were used to analyse and interpret the spectral changes. The results indicate that fixation in formalin …

Photopolymerizable Nanocomposites For Holographic Recording And Sensor Application, Elsa Leite, Izabela Naydenova, Svetlana Mintova, Louis Leclercq, Vincent Toal

Articles

Novel nanocomposites consisting of a water soluble acrylamide–based photopolymer and colloidal zeolite nanoparticles of zeolite Beta and zeolite A were prepared. The interactions between the photopolymer components and zeolite nanoparticles in the photopolymerizable nanocomposites were characterized for the first time by 13C NMR and Visible spectroscopy. It was found that the zeolite Beta nanoparticles (up to 5% wt.) behave as a non-inert additive, resulting in an effective increase in layer thickness that causes doubling of the diffraction efficiency of the nanocomposite in comparison to that of the undoped photopolymer. On the other hand, the nanocomposite containing zeolite A nanoparticles showed …

Optical Properties Of Photopolymer Layers Doped With Aluminophosphate Nanocrystals, Elsa Leite, Tzvetanka Babeva, E Ng, Vincent Toal, Svetlana Mintova, Izabela Naydenova

Articles

The optical properties of photopolymer layers consisting of an acrylamide–based matrix and microporous aluminophosphate nanocrystals of AEI- type are investigated. The compatibility of the photopolymer doped with the nanoparticles is studied. The surface and volume properties of the layers with different levels of doping with microporous nanocrystals are characterized. The effective refractive indices and absorption coefficients of the doped photopolymer layers are determined and used to calculate the refractive index and porosity of pure AEI nanoparticles used as dopants. Volume transmission gratings were recorded in the doped photopolymer layers at different spatial frequencies. By spatial monitoring of the characteristic Raman …

Two-Way Diffusion Model For Short Exposure Holographic Grating Formation In Acrylamide-Based Photopolymer, Tzvetanka Babeva, Izabela Naydenova, Dana Mackey, Suzanne Martin, Vincent Toal

Articles

A theoretical model for formation of a short exposure holographic grating is presented. The model accounts for both monomer and polymer diffusion and distinguishes between short polymer chains capable of diffusing and long polymer chains that are immobile. It is shown that the experimentally observed decrease of diffraction efficiency at higher spatial frequency can be predicted by assuming diffusion of short-chain polymers away from the bright fringes. The time evolution of the refractive index modulation after short exposure is calculated and compared with experimental results. The effects of diffusion coefficients, polymerization rates, intensity and spatial frequency of recording on the …

Optimisation Of An Acrylamide-Based Photopolymer System For Holographic Inscription Of Surface Patterns With Sub-Micron Resolution, Kevin Trainer, Kevin Wearen, Dimana Nazarova, Izabela Naydenova, Vincent Toal

Articles

We describe the optimisation of the holographic patterning of sub-micrometer surface relief structures in an acrylamide-based photopolymer. A substantial improvement in the photoinduced surface relief resolution was achieved by altering the photopolymer chemical composition and by introducing a single step post recording thermal treatment of the layers. It was observed that, by optimisation of the chemical composition of the photopolymer layers, the maximum achievable spatial frequency increases from 200 l/mm to 550 l/mm. The improvement of the surface relief amplitude by alteration of the chemical composition is limited due to the fact that both decrease of the plasticiser and increase …

Study Of The Photoinduced Surface Relief Modulation In Photopolymers Caused By Illumination With A Gaussian Beam Of Light, Tzvetanka Babeva, Dana Mackey, Suzanne Martin, Izabela Naydenova, Vincent Toal

Articles

The formation of surface relief profile in photopolymerisable systems when illuminated with a focused beam of light is simulated numerically using a two-way diffusion model that takes account both for monomer and short polymer chains diffusion. The concentration and spatial distribution dynamics of monomer and short and long polymer chains are calculated. The surface profile is obtained from calculated components concentrations considering different densities of monomer and polymer. The influence of the illumination time, intensity and spot diameter on the surface profiles dynamics is discussed. A good agreement between the calculated and the experimentally measured profiles is observed thus demonstrating …

A Diffusion Model For Spatially Dependent Photopolymerization, Dana Mackey, Tzvetanka Babeva, Izabela Naydenova, Vincent Toal

Articles

Photopolymers represent an attractive class of optical recording materials due to properties such as high refractive index modulation, dry film processing, long shelf life, etc. Applications include holographically based devices for optical storage disks, optical interconnections, optical memories and filters. This paper will address the dynamics of short-exposure holographic grating formation; a new mathematical model is proposed with the aim of understanding the experimental observations of low diffraction efficiency in high spatial frequency gratings.

Vibration Phase Measurements Using Holographic Optical Elements, Viswanath Bavigadda, Raghavendra Jallapuram, Vincent Toal, Emilia Mihaylova

Articles

The application of an out-of-plane sensitive electronic speckle pattern interferometer (ESPI) using holographic optical element (HOE) to vibration amplitude and phase mapping is reported. The novelty of the proposed system is the use of a speckle reference wave stored in a reflection holographic optical element (HOE). The incorporation of a HOE minimizes the alignment difficulties. The HOE based ESPI system is compact containing only a diode laser, HOE and a digital CMOS camera. The measurement technique is a combination of time averaged ESPI and reference beam phase modulation in an unbalanced interferometer. The reference beam phase modulation is implemented by …

Altered Mitochondrial Function And Genome Frequency Post Exposure To Γ-Radiation And Bystander Factors, Fiona Lyng, Sharon Nugent,, Carmel E. Mothersill,, Colin Seymour, Brendan Mcclean,, James E. J. Murphy

Articles

PURPOSE:

To further evaluate irregular mitochondrial function and mitochondrial genome damage induced by direct γ-irradiation and bystander factors in human keratinocyte (HPV-G) epithelial cells and hamster ovarian fibroblast (CHO-K1) cells. This is as a follow-up to our recent reports of γ-irradiation-induced loss of mitochondrial function and mitochondrial DNA (mtDNA) damage.

Continued Viability: A Review Of The Life Sciences Library At Indiana University In A Time Of Institutional Change And Proposed Branch Library Downsizing, J B. Hill, Brian Winterman

Faculty Scholarship

There has been a growing realization that academic libraries need to change to serve a new generation of learners and researchers. Efforts to enhance the "Main Library" on campus with extended hours, coffee shops, and information commons have created modern, user-friendly environments that support changing student needs and expectations.  Generally fewer resources have been given to upgrading smaller branch libraries. The need to modernize older spaces along with the availability of electronic collections, campus demands for classroom/lab space and financial pressures on libraries have prompted a rethinking of the role of branch libraries. Actively pursuing initiatives to re-envision library spaces …

Supplementing Accelerated Reading With Class-Wide Interdependent Group-Oriented Contingencies, Danielle N. Pappas, Christopher H. Skinner, Amy L. Skinner

Faculty Publications - Graduate School of Counseling

An across-groups (classrooms), multiple-baseline design was used to investigate the effects of an interdependent group-oriented contingency on the Accelerated Reader (AR) performance of fourth-grade students. A total of 32 students in three classes participated. Before the study began, an independent group-oriented reward program was being applied (i.e., a student received access to a tangible reward after passing each AR comprehension test). This program was supplemented with an interdependent group-oriented contingency, and results showed that the number of quizzes passed per week increased immediately after the intervention was applied; however, this increase was not maintained. When students were divided into ability …

Possibilities: Kamil Jbeily–The Man And His Vision For The Texas Regional Collaboratives For Excellence In Science And Mathematics Teaching, Martha May Tevis, John Mcbride

Teaching and Learning Faculty Publications

No abstract provided.

An Adaptive Control Strategy For Dstatcom Applications In An Electric Ship Power System, Pinaki Mitra, Ganesh K. Venayagamoorthy

Electrical and Computer Engineering Faculty Research & Creative Works

Distribution static compensator (DSTATCOM) is a shunt compensation device that is generally used to solve power quality problems in distribution systems. In an all-electric ship power system, power quality issues arise due to high-energy demand loads such as pulse loads. This paper presents the application of a DSTATCOM to improve the power quality in a ship power system during and after pulse loads. The control strategy of the DSTATCOM plays an important role in maintaining the voltage at the point of common coupling. A novel adaptive control strategy for the DSTATCOM based on artificial immune system (AIS) is presented in …

Cdo Ratings And Systemic Instability Causes And Cure, John Crawford

Faculty Scholarship

No abstract provided.