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Giardia Lamblia: Genomic And Molecular Analyses Of Flippase, Diana Leticia Villazana-Kretzer

Open Access Theses & Dissertations

Giardia lamblia, is an intestinal protozoan parasite responsible as a major cause of water-borne intestinal infection in humans (giardiasis). It has been proposed earlier that Giardia has limited lipid synThesis ability and therefore relies on preformed lipid molecules from outside sources. It has also been proposed that lipids are taken up through passive and active transport, and giardial flippasse play a significant role in this process. This study describes the identification and characterization of a putative homologue of flippase gene from Giardia. Flippase is an enzyme that functions as a trans-bilayer transport system facilitating the flip flop diffusion of phospholipids …

Predation By Crabs On Rocky Shores In North-East Atlantic, Ana Catarina Ferreira Da Silva

Other Faculty of Science and Engineering Theses

Highly mobile predators are known to have an important influence on shallow-water habitats. There is, however, little information about the role of crabs on the ecology of rocky shores. Here I examine the extent and consequences of predation by crabs on shores in the North-East Atlantic. The specific aims of this thesis are to: investigate spatial variation in use of the intertidal by crabs along a horizontal gradient of exposure to wave action and a vertical gradient of tidal elevation; assess their use of the intertidal as a feeding area by examining stomach content composition; examine the extent of connectivity …

A Novel Class Of Immunoproteasome Catalytic Subunit Lmp2 Inhibitor And Its Therapeutic Potentials In Cancer, Yik Khuan (Abby) Ho

University of Kentucky Doctoral Dissertations

The immunoproteasome, known to play an important role in MHC class I antigen processing and presentation, have been linked to neurodegenerative diseases and hematological cancers. However, the pathophysiological functions of the immunoproteasome in these diseases are still not very well established. This can be attributed mainly to the lack of appropriate molecular probes that selectively target the immunoproteasome catalytic subunits. Herein, we report the development of a small molecular inhibitor (AM) that selectively targets the major catalytic subunit, LMP2, of the immunoproteasome. We show that the compound covalently modifies the LMP2 subunit with high specificity in human prostate …

Syntheses And Evaluation Of Phthalocyanine Derivatives For Applications In Photodynamic And Boron Neutron Capture Therapies For Cancer, Hairong Li

LSU Doctoral Dissertations

Chapter I introduced the background of phthalocyanines including its physical properties and various synthetic methods of free-base and metallo-phthalocyanines. The background of PDT and BNCT was introduced and the objective of ideal sensitizers was described. Chapter II described the synthesis and characterization of a series of pyridiloxy-substituted zinc phthalocyanines with different length of alkyl groups. Pyridiloxy-substituted silica phthalocyanines bearing different associated axial ligands, were alkylated with methyl or PEG chains. Biological study was performed on these cationic pyridiloxy-substituted zinc phthalocyanines. Chapter III introduced the synthesis and photophysical properties of A3B-type zinc phthalocyanines conjugated with one or two cobalta-carborane cages. They …

Transcriptional Regulatory Network Analysis During Epithelial-Mesenchymal Transformation Of Retinal Pigment Epithelium., Craig H Pratt, Rajanikanth Vadigepalli, Praveen Chakravarthula, Gregory E Gonye, Nancy J Philp, Gerald B Grunwald

Department of Pathology, Anatomy, and Cell Biology Faculty Papers

PURPOSE: Phenotypic transformation of retinal pigment epithelial (RPE) cells contributes to the onset and progression of ocular proliferative disorders such as proliferative vitreoretinopathy (PVR). The formation of epiretinal membranes in PVR may involve an epithelial-mesenchymal transformation (EMT) of RPE cells as part of an aberrant wound healing response. While the underlying mechanism remains unclear, this likely involves changes in RPE cell gene expression under the control of specific transcription factors (TFs). Thus, the purpose of the present study was to identify TFs that may play a role in this process.

METHODS: Regulatory regions of genes that are differentially regulated during …

Systems Biology Meets Stress Ecology: Linking Molecular And Organismal Stress Responses In Daphnia Magna, L-H Heckmann, Rm Sibly, R Connon, Hl Hooper, Et Al

School of Biomedical Sciences

BACKGROUND: Ibuprofen and other nonsteroidal anti-inflammatory drugs have been designed to interrupt eicosanoid metabolism in mammals, but little is known of how they affect nontarget organisms. Here we report a systems biology study that simultaneously describes the transcriptomic and phenotypic stress responses of the model crustacean Daphnia magna after exposure to ibuprofen. RESULTS: Our findings reveal intriguing similarities in the mode of action of ibuprofen between vertebrates and invertebrates, and they suggest that ibuprofen has a targeted impact on reproduction at the molecular, organismal, and population level in daphnids. Microarray expression and temporal real-time quantitative PCR profiles of key genes …

Optimal Science Lab Design: Impacts Of Various Components Of Lab Design On Students’ Attitudes Toward Lab, John Basey, Loren Sackett, Natalie Robinson

International Journal for the Scholarship of Teaching & Learning

Variations in science lab design can differentially impact student learning. Quantification of these differential impacts can be used in modeling – an approach we term “optimal lab design.” In this study we estimated relative influences of six characteristics of lab design on students’ attitudes toward science labs in three different first-year college biology lab courses (USA). We used two end-of-semester surveys. The first had students choose their favorite and least favorite lab and answer questions associated with the six characteristics and their choices. The second had students provide an overall rating of each lab and a rating based on their …

Systems Biology Meets Stress Ecology:: Linking Molecular And Organismal Stress Responses In Daphnia Magna, L-H Heckmann, Rm Sibly, R Connon, Hl Hooper, Th Hutchinson, Sj Maund, Cj Hill, A Bouetard, A Callaghan

School of Geography, Earth and Environmental Sciences

No abstract provided.

Cell Adhesion On Surfaces Of Varying Topographies, Ilsoon Lee, Christina Chan, Srivatsan Kidambi

Department of Chemical and Biomolecular Engineering: Faculty Publications

Micro-topography of a surface influences cell adhesion and proliferation. To improve adhesion, polyelectrolyte multilayers (PEMs) are built on patterned support layers to increase surface wettability, thereby improving attachment and spreading of the cells. Physical parameters, such as pattern size and pitch, in part, regulate cell adhesion and proliferation. Varying the surface topography provides a method to influence cell attachment and proliferation for tissue engineering applications.

Home Range And Movements Of Feral Cats On Mauna Kea, Hawai‘I, Daniel M. Goltz, Steven C. Hess, Kevin W. Brinck, Paul C. Banko, Raymond M. Danner

United States Geological Survey: Staff Publications

Feral cats Felis catus in dry subalpine woodland of Mauna Kea, Hawai‘i, live in low density and exhibit some of the largest reported home ranges in the literature. While 95% fixed kernel home range estimates for three females averaged 772 ha, four males averaged 1 418 ha, and one male maintained a home range of 2 050 ha. Mean daily movement rates between sexes overlapped widely and did not differ significantly (P = 0.083). Log-transformed 95% kernel home ranges for males were significantly larger than those of females (P = 0.024), but 25% kernel home ranges for females were larger …

Evolutionary And Structural Analyses Of Alpha-Papillomavirus Capsid Proteins Yields Novel Insights Into L2 Structure And Interaction With L1, John Lowe, Debasis Panda, Suzanne Rose, Ty Jensen, Willie Hughes, For Yue Tso, Peter C. Angeletti

Nebraska Center for Virology: Faculty Publications

Background: PVs (PV) are small, non-enveloped, double-stranded DNA viruses that have been identified as the primary etiological agent for cervical cancer and their potential for malignant transformation in mucosal tissue has a large impact on public health. The PV family Papillomaviridae is organized into multiple genus based on sequential parsimony, host range, tissue tropism, and histology. We focused this analysis on the late gene products, major (L1) and minor (L2) capsid proteins from the family Papillomaviridae genus Alpha-papillomavirus. Alpha-PVs preferentially infect oral and anogenital mucosa of humans and primates with varied risk of oncogenic transformation. Development of evolutionary associations between …

Linking Ecosystem Processes With Wetland Management Goals: Charting A Course For A Sustainable Future, Ned H. Euliss Jr., Loren M. Smith, Douglas A. Wilcox, Bryant A. Browne

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

Wetland management in the United States has never been as challenging as in today’s highly modified landscape. Initially, wetland science and management emerged as professions in response to widespread conversion of wetlands to other uses and concerns over negative impacts on wildlife populations, especially migratory birds. Consequently, wetland management was focused on wildlife, and the initial management technique was simply to protect wetlands. However, extensive conversion of lands for agricultural and urban expansion over the past 60 years has modified ecosystem processes at the landscape scale sufficiently to compromise wetland management activities on adjacent lands dedicated to conservation. Moreover, society …

Predation By Crabs On Rocky Shores In North-East Atlantic, Ana Catarina Ferreirada Silva

School of Biological and Marine Sciences Theses

Highly mobile predators are known to have an important influence on shallow-water habitats. There is, however, little information about the role of crabs on the ecology of rocky shores. Here I examine the extent and consequences of predation by crabs on shores in the North-East Atlantic. The specific aims of this thesis are to: investigate spatial variation in use of the intertidal by crabs along a horizontal gradient of exposure to wave action and a vertical gradient of tidal elevation; assess their use of the intertidal as a feeding area by examining stomach content composition; examine the extent of connectivity …

Freedom To Err: The Idea Of Natural Selection In Politics, Schools, And Courts, Paul D. Carrington

Faculty Scholarship

No abstract provided.

Two Major Flaws Of The Animal Rights Movement, Geordie Duckler

Animal Law Review

In its current guise, animal rights advocacy imposes few intellectual demands on its proponents, usually requiring little more than a colorful Web site and a college dictionary, the former to construct an audience, and the latter to provide the emotion-laden phrases needed to inflame that audience into supporting stringent penalties for animal-related crimes. Hard thought is not really essential for animal rights advocates to be able to proclaim an end to animal abuse or an allegiance to easing animal suffering, and the standard advocate toolkit simply need not include “rational legal analysis” among the apparatus utilized to rail against mistreatment, …

The Interaction Of Haptic Imagery With Haptic Perception For Sighted And Visually Impaired Consumers, Shannon Bridgmon Rinaldo

University of Kentucky Doctoral Dissertations

Consumers evaluate products in the market place using their senses and often form mental representations of product properties. These mental representations have been studied extensively. Imagery has been shown to interact with perception within many perceptual modalities including vision, auditory, olfactory, and motor. This dissertation draws on the vast visual imagery literature to examine imagery in the haptic, or touch, modality. Two studies were undertaken to examine the relationship between haptic imagery and haptic perception The first study is based on studies from cognitive psychology that have used similar methods for examining visual imagery and visual perception. In study 1, …

Methods Development In Qualitative And Quantitative Proteomics, Ting Liu

University of Kentucky Doctoral Dissertations

Proteomics based on liquid chromatography coupled to mass spectrometry has developed rapidly in the last decade and become a powerful tool for protein mixtures analysis. LC-MS based proteomics involves four steps, sample preparation, liquid chromatography, mass spectrometry and bioinformatics. Improvements in each step have extended its applications to new biological research areas. This dissertation mainly focuses on method developments in both qualitative and quantitative proteomics.

The first part of this dissertation focuses on qualitative analysis of T. gondii Parasitophorous Vacuole Membrane (PVM) proteins, which is very important for T. gondii’s survival. The hypothesis of this study is that proteomic …