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News From The Flock, Vol. 2007 Issue 3, Sperry-Galligar Audubon Society

Sperry-Galligar Audubon Society Newsletters

No abstract provided.

Ten Core Principles For Designing Effective Learning Environments: Insights From Brain Research And Pedagogical Theory, Judith V. Boettcher

Innovate: Journal of Online Education

No abstract provided.

Plan Of Management For The Kalbarri Blue Holes Fish Habitat Protection Area, Department Of Fisheries

Fisheries Management Papers

The FHPA has been declared to protect and conserve an example of a near-shore reef community. In order to achieve this aim, and encourage the appreciation and conservation of fish, a number of management strategies have been identified which restrict recreational and commercial fishing. The FHPA is approximately 420 metres long and approximately 130 metres wide at the southern end and 140 metres wide at the northern end.

Invasion By Aegilops Triuncialis (Barb Goatgrass) Slows Carbon And Nutrient Cycling In A Serpentine Grassland, Rebecca E. Drenovsky, Katharine M. Batton

Biology

Invasive plant species alter plant community composition and ecosystem function. In the United States, California native grasslands have been displaced almost completely by invasive annual grasses, with serpentine grasslands being one of the few remaining refugia for California grasslands. This study examined how the invasive annual grass, Aegilops triuncialis, has altered decomposition processes in a serpentine annual grassland. Our objectives were to (1) assess howA. triuncialis alters primary productivity and litter tissue chemistry, (2) determine whether A. triuncialis litter is more recalcitrant to decomposition than native litter, and (3) evaluate whether differences in the soil microbial community in A. triuncialis-invaded …

Pressure Dissociation Of Integration Host Factor-Dna Complexes Reveals Flexibility-Dependent Structural Variation At The Protein-Dna Interface, Donald F. Senear, Vira Tretyachenko-Ladokhina, Michael L. Opel, Kimberly A. Aeling, G. Wesley Hatfield, Laurie M. Franklin, Reuben C. Darlington, J. B. A. Ross

Chemistry and Biochemistry Faculty Publications

E. coli Integration host factor (IHF) condenses the bacterial nucleoid by wrapping DNA. Previously, we showed that DNA flexibility compensates for structural characteristics of the four consensus recognition elements associated with specific binding (Aeling et al., J. Biol. Chem. 281, 39236-39248, 2006). If elements are missing, high-affinity binding occurs only if DNA deformation energy is low. In contrast, if all elements are present, net binding energy is unaffected by deformation energy. We tested two hypotheses for this observation: in complexes containing all elements, (1) stiff DNA sequences are less bent upon binding IHF than flexible ones; or (2) DNA sequences …

Dynamic Polarizabilities Of Rare-Earth-Metal Atoms And Dispersion Coefficients For Their Interaction With Helium Atoms, Xi Chu, Alexander Dalgarno, Gerrit C. Groenenboom

Chemistry and Biochemistry Faculty Publications

The dynamic scalar and tensor polarizabilities of the rare-earth-metal atoms are calculated with time-dependent density functional theory. The frequency-dependent polarizabilities at imaginary frequencies are used to determine the isotropic and orientation-dependent van der Waals coefficients for the interactions of the rare-earth-metal atoms with helium atoms. The static polarizabilities are compared with other theoretical values and with experimental results. The agreement is satisfactory in most cases but there are some exceptions where the discrepancy between theory and experiment is significant. The derived isotropic van der Waals coefficients range between 37 and 50 E(H)a(0)(6) and the orientation-dependent coefficients between 2 and -1 …

Poisson-Boltzmann Calculations Of Nonspecific Salt Effects On Protein-Protein Binding Free Energies, Claudia Bertonati, Barry Honig, Emil Alexov

Publications

The salt dependence of the binding free energy of five protein-protein hetero-dimers and two homo-dimers/tetramers was calculated from numerical solutions to the Poisson-Boltzmann equation. Overall, the agreement with experimental values is very good. In all cases except one involving the highly charged lactoglobulin homo-dimer, increasing the salt concentration is found both experimentally and theoretically to decrease the binding affinity. To clarify the source of salt effects, the salt-dependent free energy of binding is partitioned into screening terms and to self-energy terms that involve the interaction of the charge distribution of a monomer with its own ion atmosphere. In six of …

A Link Between Hurricane-Induced Tree Sprouting, High Stem Density And Short Canopy In Tropical Dry Forest, Skip Van Bloem, Peter G. Murphy, Ariel E. Lugo

Publications

The physiognomy of Caribbean dry forest is shorter, denser and contains a greater proportion of multi-stemmed trees than other neotropical dry forests. Our previous research, conducted after Hurricane Georges in 1998, has shown that dry forest trees sprout near the base following hurricane disturbance, even if the trees have not incurred structural damage. However, for these hurricane-induced sprouts to contribute to the physiognomy of the forest, they must grow and survive. We followed sprout dynamics and stem mortality on 1,407 stems from 1998, after Hurricane Georges, until 2005. The number of surviving sprouts and the proportion of sprouting stems decreased …

Oocyte Cytoplasmic Maturation: A Key Mediator Of Oocyte And Embryo Developmental Competence., A J Watson

Obstetrics & Gynaecology Publications

Efforts have intensified to successfully mature and inseminate oocytes in vitro and then culture ensuing embryos to transferable stages from a large number of mammalian species. Success varies, but generally even for the most successful species it is only possible to obtain a maximum of a 40 to 50% development of zygotes to the blastocyst stage. Reduced oocyte developmental competence is suggested as a primary reason for the reduced potential of in vitro-produced embryos. The vast majority of in vitro-matured oocytes are meiotically competent; however, many do not attain an optimal oocyte diameter before insemination. Variations in oocyte in vitro …

Improved Performance Of Marron Using Genetic And Pond On Using Genetic And Pond Management Strategies, Craig Lawrence Dr

Fisheries Research Contract Reports

Marron (Cherax tenuimanus) are the highest valued freshwater crayfish farmed in Australia. This project addressed the need to increase the profitability of commercial marron farms by improving growth rates and pond management strategies.

Fisheries Research Contract Report No. 18 - Aquatic Animal Health Subprogram: Current And Future Needs For Aquatic Animal Health Training And For Systems For Merit-Based Accreditation And Competency Assessments (Frdc Project No. 2005/641) Final Report, Matt Landos, Navneet Dhand, Brian Jones, Richard Whittington

Fisheries Research Contract Reports

To scope and clearly define current and future needs for aquatic animal health training and for systems for merit-based accreditation and competency assessments.

Provision of high quality aquatic animal health (AAH) services is a complex multidisciplinary activity. Hence, training programs must address all discipline areas to achieve the desired outcome of robust service delivery to meet all stakeholder group needs. The current and future needs for AAH training have been identified across many sectors through survey work and direct interviews with key stakeholders. There is a shortfall in both total capacity and more prominently, in the availability of high skill …

Esa And Environmental Justice, George Middendorf, Charles Nilon

Department of Biology Faculty Publications

No abstract provided.

Correction: African American Mitochondrial Dnas Often Match Mtdnas Found In Multiple African Ethnic Groups, Bert Ely, Jamie Wilson, Fatimah Linda Collier Jackson, Bruce Jackson

Department of Biology Faculty Publications

After the publication of this work [1], we became aware that AFDIL data set used to construct our database of sub-Saharan mtDNA sequences had been mislabelled, and in fact, did not contain Sierra Leone mtDNA sequences. We have obtained the correct Sierra Leone data set from AFDIL, reconstructed the database using the new file, and reanalyzed all of the data. The size of our database was reduced from 3725 to 3717 since the new Sierra Leone data set contained 109 sequences instead of 117 in themislabelled data set. The swapping of data sets resulted in a cascade of minor corrections …

Modification Of The Active Site Of Mycobacterium Tuberculosis Katg After Disruption Of The Met-Tyr-Trp Cross-Linked Adduct, Sofia M. Kapetanaki, Xiangbo Zhao, Shengwei Yu, Richard S. Magliozzo, Johannes Schelvis

Department of Chemistry and Biochemistry Faculty Scholarship and Creative Works

Mycobacterium tuberculosis catalase-peroxidase (Mtb KatG) is a bifunctional enzyme that possesses both catalase and peroxidase activities and is responsible for the activation of the antituberculosis drug isoniazid. Mtb KatG contains an unusual adduct in its distal heme-pocket that consists of the covalently linked Trp107, Tyr229, and Met255. The KatG(Y229F) mutant lacks this adduct and has decreased steady-state catalase activity and enhanced peroxidase activity. In order to test a potential structural role of the adduct that supports catalase activity, we have used resonance Raman spectroscopy to probe the local heme environment of KatG(Y229F). In comparison to wild-type KatG, resting KatG(Y229F) contains …

The Connection, Volume 5, Issue 02, Spring 2007, Sally Davis, Linda Penaloza, Marla Pardilla, Elverna Bennett

Newsletters

The Connection is published by the Prevention Research Center (PRC), Prevention & Population Sciences, University of New Mexico, Albuquerque. The purpose of The Connection is to provide reports and updates on programs of the PRC and those of its Community Advisory Council and other partners.

Nebline, March 2007

NEBLINE Newsletter Archive from Nebraska Extension in Lancaster County

$pending YOUR Calorie $alary: Tips for Using MyPyramid
All-America Selections Flower and Vegetable Award Winners for 2007
Planting Asparagus
Alternative Agriculture Provides Opportunities For Enthusiastic Entrepreneur
Proper Precautions for Chain Saw Safety
Collection of Unwanted Pesticides, March 23
Computerized Farm Financial Recordkeeping, March 19
Upcoming Pesticide Applicator Trainings
Use Pheromone Traps to Locate Indian Meal Moths Infestations
ewf needs volunteers
Build a Bat House
Fertilizing Crop Land with Biosolids
Potential Benefits and Hazards of Bats
Food Safety: What You Don’t Know CAN Hurt You
Ground Beef Vegetable Soup with Rice Recipe
$hop $mart to $tretch Your Food Dollar
Add Acidic …

Wmi Outdoor News Bulletin * March 2007, Volume 61, No. 3

Wildlife Management Institute Outdoor News Bulletin

Contents:

• Chronic Wasting Disease update

• Conservationists irked by USDA promotion of amber waves of gas at CRP expense

• Tennessee provides leadership for native grass restoration in the Southeast

• National Wildlife Refuges to suffer large cutbacks in staff

• Rio Grande Bosque legislation introduced

• Worth reading: Fly-fishing for Sharks: An American Journey

A Biological Framework For Evaluating Whether A Species Is Threatened Or Endangered In A Significant Portion Of Its Range, Robin Waples, Peter B. Adams, James Bohnsack, Barbara L. Taylor

United States Department of Commerce: Staff Publications

Under the U.S. Endangered Species Act (ESA), a species can be listed if it is at risk “in all or a significant portion of its range,” but the ESA provides no guidance on how to interpret this key phrase. We propose a simple test to determine whether the areas of a species’ range in which it is currently at risk amount to a significant portion: If the species were to become extirpated from these areas, at that point would the entire species be at risk? If so, then these areas represent a significant portion of the species’ range. By establishing …

Adequacy Of Communicating Results From Screening Mammograms To African American And White Women, Beth Jones, Kam Reams, Lisa Calvocoressi, Amy B. Dailey, Stanislav V. Kasl, Nancy M. Liston

Health Sciences Faculty Publications

Objective. We examined whether African American women were as likely as White women to receive the results of a recent mammogram and to self-report results that matched the mammography radiology report (i.e., were adequately communicated). We also sought to determine whether the adequacy of communication was the same for normal and abnormal results.

Methods. From a prospective cohort study of mammography screening, we compared self-reported mammogram results, which were collected by telephone interview, to results listed in the radiology record of 411 African American and 734 White women who underwent screening in 5 hospital-based facilities in Connecticut between October 1996 …

In Vivo And In Vitro Anaerobic Mating In Candida Albicans, Raluca Dumitru, Dhammika H.M.L.P. Navarathna, Camile P. Semighini, Christian G. Elowsky, Razvan Dumitru, Daniel Dignard, Malcom Whiteway, Audrey L. Atkin, Kenneth W. Nickerson

Papers in Microbiology

Candida albicans cells of opposite mating types are thought to conjugate during infection in mammalian hosts, but paradoxically, the mating-competent opaque state is not stable at mammalian body temperatures. We found that anaerobic conditions stabilize the opaque state at 37°C, block production of farnesol, and permit in vitro mating at 37°C at efficiencies of up to 84%. Aerobically, farnesol prevents mating because it kills the opaque cells necessary for mating, and as a corollary, farnesol production is turned off in opaque cells. These in vitro observations suggest that naturally anaerobic sites, such as the efficiently colonized gastrointestinal (GI) tract, could …

Thermoeconomics Of Seasonal Latent Heat Storage System, Yaşar Demirel, H. Hüseyin Öztürk

Papers in Thermal Mechanics

A simple thermoeconomic analysis is performed for a seasonal latent heat storage system for heating a greenhouse. The system consists of three units that are a set of 18 packed-bed solar air heaters, a latent heat storage tank with 6,000 kg of technical grade paraffin wax as phase-changing material, and a greenhouse of 180m2. The cost rate balance for the output of a unit is used to estimate the specific cost of exergy for a yearly operation. Based on the cost rate of exergy, fixed capital investment, operating cost, and economic data, approximate cash-flow diagrams have been prepared. The systems …

Re-Imagining Public Enforcement Of Title Ix, Julie A. Davies, Lisa M. Bohon

Brigham Young University Education and Law Journal

No abstract provided.

Bird-Friendly Development Guidelines

Fatal Light Awareness Program (FLAP)

INTRODUCTION
• Background
• Need for Policy and Action
• Policy Context
• Relevance to New, Existing and Heritage Buildings

DESIGN-BASED DEVELOPMENT STRATEGIES FOR BIRD-FRIENDLY BUILDINGS
• Glass
• Visual Markers
• Strategies for Creating Visual Markers
• Strategies for Muting Reflections

LIGHT POLLUTION
• External Lighting Fixtures
• Types of Lighting
• Preferred Lighting
• Discouraged Lighting

BUILDING MANAGEMENT OPERATIONS
• Reducing Light Pollution from Interior Lights
• Cleaning During the Day
• Internal Location of Greenery

SITE DESIGN STRATEGIES
• Lighting
• Other Site Features
• Comprehensive Bird-Friendly Site Strategy

CONCLUSION
• Glossary

Endangered Species Bulletin, March 2007 - Vol. Xxxii No. 2

Endangered Species Bulletin

In this issue:
4 Fisheries and Habitat Conservation
6 Species Recovery through Habitat and Resource Conservation
8 Fish and Wildlife Management Assistance
12 The Environmental Contaminants Program
14 Clearing the Water for Mussels
16 The Lake Apopka Agreement
18 Developing Barriers to Biological Invasions
20 Alaskans are “Pulling Together”
22 NFHS Responds to an Emerging Conservation Challenge

Refuge Update – March/April 2007, Volume 4, Number 2

RefugeUpdate (USFWS-NWRS)

Table of Contents:
What’s Melting: Togiak Refuge Sizes Up Its Glaciers, page 3
Focus on Fish Conservation, pages 10-15
Whatever happened to…, pages 16-17
Wildlife Cooperatives, page 20

Refuge Update – March/April 2010, Volume 7, Number 2

RefugeUpdate (USFWS-NWRS)

Table of Contents:

First, We Inventory by Bill O’Brian
The Legacy We Carry On By Greg Siekaniec
Straight from the Secretary
FOCUS: Maintenance
CMS Is Coming to a Web Site Near You
Protecting Wildlife, Producing Energy

The Time Invariance Principle, Ecological (Non)Chaos, And A Fundamental Pitfall Of Discrete Modeling, Bo Deng

Department of Mathematics: Faculty Publications

This paper is to show that most discrete models used for population dynamics in ecology are inherently pathological that their predications cannot be independently verified by experiments because they violate a fundamental principle of physics. The result is used to tackle an on-going controversy regarding ecological chaos. Another implication of the result is that all continuous dynamical systems must be modeled by differential equations. As a result it suggests that researches based on discrete modeling must be closely scrutinized and the teaching of calculus and differential equations must be emphasized for students of biology.

Middle Atlantic, Todd M. Day

North American Birds

No abstract provided.

New Mexico, Sartor O. Williams Iii

North American Birds

No abstract provided.

Mexico, Hector Gomez De Silva

North American Birds

No abstract provided.