Digital Commons Network^™

Comparison Of Aging Techniques In Wild Bottlenose Dolphins (Tursiops Truncatus) Of Unknown Age From The Mississippi Sound., Christa Elizabeth Barrett

Theses and Dissertations

Age determination of bottlenose dolphins (Tursiops truncatus) is a critical tool in understanding their health. There are many methods of aging dolphins including morphometrics, counting growth layer groups (GLGs) of teeth, comparing dentin to pulp cavity ratio on dental radiographs, analysis of the pectoral flipper radiographs, and epigenetic testing. The most common method for aging toothed cetaceans is the counting of GLGs in the teeth. Since there are many challenges associated with aging dolphins based on the counting of GLGs, a processing technique that results in better resolution of GLGs is needed. This is a two-part study that …

Gene Expression Effects On Productivity And Stress Tolerance In Polyclonal Plantings Of Populus Deltoides, Macy Gosselaar

Theses and Dissertations

Polyclonal plantings of Populus deltoides are expected to display increased site resource use, productivity, and tolerance to stress through plasticity changes leading to niche differentiation (i.e changes to crown/canopy structures). In the present study, P. deltoides Clones S7C8, 110412, and polyclonal plots were tested for differentially expressed genes and enriched biological pathways between planting schemes. Transcriptomic analysis of leaves revealed upregulation of an active growth gene and gene family members that play important roles in plant stress and stress tolerance in polyclonal plantings. A gene associated with oxidative stress was upregulated in polyclonal plantings across all treatments. Secondary metabolic pathways …

An Analysis Of Moisture Environments Associated With Mature North Atlantic Tropial Cyclones, Katherine Berislavich

Theses and Dissertations

Tropical cyclone (TC) intensity and structure are affected by their environments, including sea surface temperature, vertical wind shear, and atmospheric moisture. Analyses of TC environments often rely on area-averaged quantities, yet the spatial variability of these fields can affect TC behavior, such as moisture distribution impacting where and how much rain falls. This study identifies spatial patterns of environmental moisture surrounding mature North Atlantic TCs during 2000-2021 in shear of less than 20 knots. Empirical orthogonal function analysis of total column water vapor reveals six dominant patterns. These patterns account for nearly 67% of the variance in the dataset and …

Dune To Shore: The Relationship Between Vegetative Dune Systems And Shoreline Stability In Barrier Islands, Walter Hastings Hogue

Theses and Dissertations

Dauphin, Petit Bois, and Horn Island form the Alabama gulf-barrier chain directly south of Mobile Bay. Many studies have targeted local climate stressors and the flux of longshore currents as factors for erosional and accretional changes on these islands, but little attention is paid to the degradation of their vegetative dune-systems as a contributor to their shoreline morphology (Hanley et al., 2014; Smith, 2018; Byrnes, 2010). This study fills this literary gap, utilizing GIS raster classification and Digital Shoreline Analysis System to measure vegetative health and shoreline change on these islands and verify a relationship between these two factors. The …

A Survey Analysis Of Southeastern U.S. Dairy Producers’ Emotional States And Their Subjective Pain Perception Of Dairy Cows, Michelle M. Schuh

Theses and Dissertations

Dairy producers play a central role in evaluating and seeking treatment or care for animal pain. The primary aim of this study is to examine dairy producers’ emotional states and professional quality of life and analyze the relationship between these variables and their perception of pain in dairy cattle. Dairy farm owners and managers of 65 southeastern U.S. herds participated in a survey that included demographic information, the Depression, Anxiety, and Stress Scale, a modified Professional Quality of Life Scale, and 23 items requiring participants to evaluate various painful conditions in cattle.

The Effects Of Mechanical Strain On Vascular Calcification And The Canonical Wnt Pathway, Hannah E. Douglas

Theses and Dissertations

Cardiovascular disease is a significant health crisis, representing 32% of deaths worldwide in 2019. Vascular calcification (VC), a major contributor to cardiovascular disease, is a regulated biomineralization process whose exact mechanisms are unknown. Additionally, vascular smooth muscle cells (VSMCs) significantly contribute to VC by undergoing a phenotypic switch and differentiating into osteoblast-like cells. When factors like hypertension cause disturbed laminar flow in the body’s vasculature, the mechanical stress promotes the phenotypic switch and calcification of VSMCs via mechanotransduction. VC is also induced by the Wnt pathway, which is activated via mineral imbalance and mechanical stimulation. However, the exact mechanisms behind …

Leaf Area Index And Aboveground Biomass Estimation Of Populus And Its Hybrids Using Terrestrial Lidar, Surya Adhikari

Theses and Dissertations

Short rotation woody crops (SRWC) eastern cottonwood (Populus deltoides) and hybrid poplar plantations were established in 2021 in Pontotoc and Oktibbeha counties of Mississippi to study the biomass potential of SRWC for biofuel production. We used a novel backpack LiDAR system to measure forest metrics and harvested sample trees to build aboveground biomass (AGB) and leaf area index (LAI) equations. The results showed that LiDAR-derived variables accurately estimated aboveground biomass (R² =0.81 and 29.22 % RMSE). However, the LAI estimation results showed that the LiDAR metrics moderately explained field measurements of LAI (R² =0.31 and 18.05% …

Pre-Emergence Herbicide Programs For Weed Control In Soybean (Glycine Max) And The Effect Of Rainfall Amount On Herbicide Activity, Caleb Knox Meyer

Theses and Dissertations

Preemergence (PRE) herbicides are used to control weeds and reduce pressure on postemergence (POST) herbicides. However, knowledge of length of control each herbicide provides, as well as the amount of activation rainfall required for adequate weed control, is unknown in Mississippi soybean production. Twenty-one PRE applied soybean herbicides were evaluated for their duration of residual control for five weeks over twelve site years on three weed species from 2021-2022. Some differences in control following herbicide application used on certain weed species were observed at different times. However, most PRE herbicides resulted in adequate (greater than or equal to 90%) control …

Nanoscale Modeling Of Membrane Systems Under Mechanical Deformation In Traumatic Brain Injury Using Molecular Dynamics, Anh Thi Ngoc Vo

Theses and Dissertations

Neuronal membrane disruption and mechanoporation are nanoscale damage mechanisms that critically affect brain cell viability during traumatic brain injury (TBI). These nanoscale cellular impairments are elusive in experiments and necessitate in silico approaches such as molecular dynamics (MD) simulations. Implementing MD, this research aims to investigate the effects of different key factors related to membrane deformation and damage, including force field resolutions, lipid compositions, and loading conditions.

To examine the impact of force field resolution, MD deformation simulations were conducted on 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphatidylcholine (POPC) lipid bilayer membranes, using all-atom (AA), united-atom (UA), and coarse-grained Martini (CG-M) force fields. The mechanical responses …

Object Itineraries Of Metal Artifacts From The Stark Farm Site Complex (22ok778), Madeleine Marie Hale

Theses and Dissertations

This thesis focuses on creating a deeper understanding of European-made metal objects uncovered at a Late Mississippian period site by using an object itinerary theoretical framework. This theory allows for objects to be understood and analyzed without bias as it acknowledges Indigenous and archaeological perspectives by considering the many different contexts an object moves through. I apply this theory to these European-made metal objects that were transformed and used by the Chicasa as a way to introduce a more collaborative and holistic approach to the other analytical methods being used at Stark Farm (22OK778). This process was completed by using …

Upland Cotton And Nematodes: An Analysis Of Historical Resistance, Upcoming Threats, And Co-Inoculation Effects, Amanda Gaudin

Theses and Dissertations

Upland cotton (Gossypium hirsutum ) is an important fiber crop grown throughout the southern United States. Plant-pathogenic nematodes are worm-like animals that feed on the roots of most agronomic crops, including cotton. The southern root-knot nematode (Meloidogyne incognita, RKN) and the reniform nematode (Rotylenchulus reniformis, RN) cause significant yield losses in cotton every year. Current sources of resistance are effective but limited, therefore historical screenings of cotton accessions were revisited in search for novel resistance sources. None were identified but many of the screened accessions possessed markers of known root-knot nematode and reniform nematode resistance. …

Response Of Lettuce (Lactuca Sativa L.) To Salt Stress, Bikash Adhikari

Theses and Dissertations

Lettuce is a highly nutritional crop that is sensitive to multiple stresses, including salt stress. The decreasing availability of salt-free water is posing a major challenge to growing nutritious lettuce in hydroponic systems. Despite evidence that salt stress affects yield and nutrition, its impacts on economically important growth stages are overlooked. This study addressed the knowledge gaps regarding the salt stress impact on romaine lettuce. Four independent experiments were conducted in controlled environment conditions using 2-38 lettuce genotypes, to assess the effects of salt stress at rosette or head formation. An increase in sodium chloride (NaCl) levels (0 to 150 …

Survival, Persistence, Regrowth And Morphotype Variation Of Listeria Monocytogenes Strains After Exposure To First Generation And Second Generation Quaternary Ammonium Compounds In Water, Stephen Schade

Theses and Dissertations

Listeria monocytogenes is one of the toughest challenges the food industry is facing today. While quaternary ammonium compounds (QAC) are typically applied at very high concentrations to kill L. monocytogenes, there are some factors that can cause its reduced efficacy in the food processing environment. Sublethal concentrations of stagnated QAC have been found both in processing plants and in waste waters released to the environment. Therefore, the purpose of this study was to investigate the ability of two L. monocytogenes strains, Bug600 (serotype 1/2a) and ScottA (serotype 4b) to persist in lethal and sublethal concentrations of first generation QAC (benzalkonium …

Non-Destructive Evaluation Of White Striping And Microbial Spoilage Of Broiler Breast Meat Using Structured-Illumination Reflectance Imaging, Ebenezer O. Olaniyi

Theses and Dissertations

Manual inspection is a prevailing practice for quality assessment of poultry meat, but it is labor-intensive, tedious, and subjective. This thesis aims to assess the efficacy of an emerging structured illumination reflectance imaging (SIRI) technique with machine learning approaches for assessing WS and microbial spoilage in broiler breast meat. Broiler breast meat samples were imaged by an in house-assembled SIRI platform under sinusoidal illumination. In first experiment, handcrafted texture features were extracted from direct component (DC, corresponding to conventional uniform illumination) and amplitude component (AC, unique to the use of sinusoidal illumination) images retrieved from raw SIRI pattern images build …

Changes In Paleobiodiversity Across The K-Pg Boundary In Oktibbeha County, Mississippi, Joshua Broussard

Theses and Dissertations

Evidence of the Cretaceous-Paleogene (K-Pg) extinction can be seen across the Mississippi Embayment, however research examining the K-Pg boundary in the state of Mississippi is lacking. The objective of this study addresses how macrofauna changed across the K-Pg boundary in Oktibbeha County, Mississippi and subsequent comparison to other Early Paleogene and Late Cretaceous benthic marine macrofaunal localities. Comparison included previously collected material as well as specimens collected during this study in order to reconstruct the biological community living on the seafloor in the earliest Paleocene Mississippi Embayment. The primary fauna present after the K-Pg extinction was mainly composed of small …

Investigating Potential Indicators Of Soil Health Through Microbiome Response To Environmental And Anthropogenic Stressors, Austin Cook

Theses and Dissertations

Traditionally, the analysis of soil health has overlooked the biological component of soil due to poor understanding of connections between the microbiome and empirically measured soil health indicators. The purpose of this study was to assess the effects of environmental and anthropogenic stressors on the soil microbiome, with the aim of identifying measurable soil biological indicators. Chosen soils were examined under distinct conditions to evaluate the effect of selected environmental and anthropogenic stressors on the microbiome. Soil biological responses were analyzed via enzymatic response, microbial functional genes, and microbial community. Environmental factors such as soil moisture and organic matter showed …

The Effectiveness Of Pbis For Students Who Have Behavior Interventions Plans, Valeria Shaunta Fortune-Wilson

Theses and Dissertations

This qualitative study aimed to investigate the effectiveness of Positive Behavior Interventions and Supports (PBIS) on students with Behavior Intervention Plans. This study used qualitative research methods to obtain the perspectives of teachers who had implemented PBIS on students with behavior plans. The study relied on semi-structured interviews using questions established by the researcher. The results of the study indicate that most of the teachers interviewed feel that PBIS is effective for students with PBIS because it acts as a motivational tool, gives students something to work towards, decreases negative behaviors, and increases positive behaviors. Additionally, the study indicates that …

Determining The Best Indicators For Targeted Selective Treatment Development Against Gastrointestinal Nematodes In Sheep And Goats In Mississippi, Lindsey N. Dearborn

Theses and Dissertations

An understanding of characteristics of sheep and goat producers across the Southeast United States is crucial for the development and vitality of the small ruminant industry. The state of Mississippi (MS) is rich in animal agriculture, and sheep and goats display the potential to become an integral part of the state’s agricultural livelihood. However, sheep and goat producers are constantly combatting the negative effects gastrointestinal nematodes inflict upon their animals. With the anthelmintic resistance status rising across the globe, sustainable methods to control parasites in small ruminants are crucial. Therefore, small ruminant producers must develop an accurate targeted selective treatment …

Oocytes To Offspring: Optimizing Assisted Reproductive Technologies (Art) To Support Amphibian Conservation, Shaina Shaira Lampert

Theses and Dissertations

The increasing dependence on amphibian captive breeding programs to support at-risk populations has led to growth in the application of assisted reproductive technologies (ART) to aid with the management of decreasing population density and genetic diversity. Already the integration of ART within these programs has led to monumental successes and shows great promise as a means to augment amphibian breeding efforts when natural breeding has low success. The focus of this project was to continue the optimization of ART to aid in making these technologies more widely applicable. Specific objectives include developing a framework that can be used to standardize …

Designing Bioinspired Materials With Tunable Structures And Properties From Natural And Synthetic Polymers, Anandavalli Varadarajan

Theses and Dissertations

Biological systems are composed of complex materials which are responsible for performing various functions, such as providing structural support, mobility, functional adaptation to the environment, damage repair, and self-healing. These complex materials display excellent mechanical properties and can rapidly adapt to external stimuli. Thus, nature inspires in terms of source materials, functions, and designs to develop new-generation structural and functional materials. Polymers (natural or synthetic) are excellent sources of developing materials to mimic the functions of soft segments in biological systems. This dissertation focuses on synthesizing and characterizing two different materials with tunable structures and properties: complexes from natural polysaccharides …

Screening And Selection For Resistance To Gray Leaf Spot (Pyricularia Oryzae) In Early Planted Annual Ryegrass, Calyn M. Adams

Theses and Dissertations

Cattlemen in the southeastern United States widely plant annual ryegrass [Lolium perenne L. spp. multiflorum (Lam.) Husnot] (ARG). It is often planted earlier than the recommended window. This exposes juvenile stands to increased pressure from gray leaf spot (Pyricularia oryzae Cavara) (GLS), causing stand loss. This study was designed to screen for resistance to P. oryzae in two ARG genotypes, Vertyl and a heat-tolerant germplasm (HTARG5) with the objective of developing a crossbred population to be improved using restricted, recurrent phenotypic selection. Experiments were conducted from 2021 – 2022. Disease severity (DS) was assessed 3wk after inoculation with …

Trace Metal Analysis Of Pond Sediments To Measure Deposition From A Coal-Fired Power Plant In Ackerman Mississippi, Charles Bills

Theses and Dissertations

Trace element sediment pollution due to coal power plants have been reported in many countries. In this study, pond sediment samples collected from locations around a coal fired power plant in Ackerman, MS, were evaluated for their trace element concentration and pollution status. The samples were collected at two depths to study changes in element accumulation over time. The samples were digested and the elements, As, Cd, Cr, Cu, Pb, Hg, and Zn were analyzed using ICP-MS. Results were then compared to known background concentrations as well as sediment quality guidelines and pollution thresholds. The sample locations downwind of the …

Isolation And Culture Of Epichloё For Reinfection Of Endophyte-Free Southeastern Wildrye (Elymus Glabriflorus), Bryna Joann Haile

Theses and Dissertations

Mutualistic relationships between endophytic fungi and grasses have shown to improve the hardiness of the host. This relationship is common in grasses, including North American native grasses that are important in both forage and grassland ecosystems. Elymus species, such as Canada wildrye (CWR), commonly host the endophytic fungi, Epichloё, while southeastern wildrye (SEWR) may not. In this study, seed of CWR and seed and leaves from local SEWR were assessed for endophyte infection. Infection status was confirmed via histological analysis of seed squashes and leaf peels. Presence/absence of endophyte was determined by scanning for mycelia within seed and between leaf …

Adherence To A Gluten-Free Diet And Depression, And Nutrient Distribution In Participants With Celiac Disease, Mohammad K. Shushari

Theses and Dissertations

Celiac disease (CD), an autoimmune disorder affecting millions of Americans, poses significant obstacles leading to a normal life. With no known cure, adherence to a strict glutenfree diet (GFD) is essential. However, the cost and limited availability of gluten-free alternatives can burden individuals with CD. Additionally, factors such as socioeconomic status, nutrient deficiencies, and the nature of the disease may contribute to mental health issues. This study aimed to investigate the influence of adherence to a GFD on depression in CD patients. The prevalence of depression among individuals with CD from diverse backgrounds was examined, along with the analysis of …

Timing Is Everything: Impacts Of Firing Technique And Season On Plant Communities In The Southeastern United States, Luke Michael Resop

Theses and Dissertations

Prescribed fire is a common land management tool in the southeastern United States. Historical fires occurred primarily in the growing season, but modern day prescribed fire is commonly restricted to the dormant season. Plant community responses to various fire regimes are relatively unknown, and managers require information on how fire regimes impact plant communities. To address these limitations, I studied the impacts of March and June fire on plant communities. Results indicated various woody midstory species respond differently to fire season and community response is driven by species composition. In another study, I examined impacts of February, May-June, and September-October …

Soil Health As Influenced By The Integration Of Cover Crops And Poultry Litter In North-Central Mississippi, Nikitha Reddy Kovvuri

Theses and Dissertations

Soil health-based agricultural management practices are widely promoted to improve soil structure, infiltration and reduce erosion. This study was conducted at two locations in North-Central Mississippi to evaluate the influence of different cover crop species and poultry litter on soil health that can impact crop production, climate change, and resilience. The results indicated that the cover crops showed a little effect on some soil health indicators compared to control treatment. However, in one location, rye, and a mixture of cover crops decreased bulk density and increased available water content and organic matter. The poultry litter had a positive effect on …

Visual And Spatial Audio Mismatching In Virtual Environments, Zachary Lawrence Garris

Theses and Dissertations

This paper explores how vision affects spatial audio perception in virtual reality. We created four virtual environments with different reverb and room sizes, and recorded binaural clicks in each one. We conducted two experiments: one where participants judged the audio-visual match, and another where they pointed to the click direction. We found that vision influences spatial audio perception and that congruent audio-visual cues improve accuracy. We suggest some implications for virtual reality design and evaluation.

Applying Push-Pull-Mooring Model To Investigate Non-Malicious Workarounds Behavior, Nawaf Rasheed Aljohani

Theses and Dissertations

More than half of the violations of information systems security policies are initiated by non-malicious activities of insiders. To investigate these non-malicious activities, we utilized the theory of workaround and argued that the application of neutralization techniques impacts the use of workarounds. We built our model using three theories: the theory of workaround, push-pull-mooring theory, and techniques of neutralization. We identified the elements of workarounds related to non-malicious violations and proposed a theoretical perspective using the push-pull-mooring theory to investigate non-malicious workarounds empirically. We propose that non-malicious activities of insiders can be seen as a switching behavior, with push factors …

Small Area Estimation Of County-Level Forest Attributes Using Forest Inventory Data And Remotely Sensed Auxiliary Information, Okikiola Michael Alegbeleye

Theses and Dissertations

The Forest Inventory and Analysis (FIA) program of the United States Department of Agriculture Forest Service collects forest inventory data that provide estimates with reasonable accuracy at the national scale. However, for smaller domains, these estimates are often not as accurate due to the small sample size. Small area estimation improves the accuracy of the estimates at smaller domains by relying on auxiliary information. This study compared direct (FIA estimates), indirect (multiple linear regression), and composite estimators (Fay-Herriot) using auxiliary information derived from Landsat and Global Ecosystem Dynamics Investigation (GEDI) to obtain county-level estimates of forest attributes namely total and …

Development Of Preservative-Treated Cross-Laminated Timber And Lignin-Reinforced Polyurethane-Adhesive For Glued Laminated Timber, Samuel Oluwafemi Ayanleye

Theses and Dissertations

Interest in the use of mass timber in building and construction is growing worldwide, this is due to the structural integrity and reduced environmental footprint of timber-based structures. Concerns associated with the biological and environmental degradation of mass timber necessitate the development of adequate protection strategies to ensure the durability of these products. Preservative treatment is a proven technique that increases the durability and performance of wood in-service and can also be applied to large-sized timber panels such as cross-laminated timber (CLT). Therefore, this study focused on investigating the feasibility of treating prefabricated 3- and 5-layer CLT panels with Copper-azole …