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The Relationship Between Gender Stereotypes And Academic Performance For Rural Eighth Grade Students: A Mixed Methods Ethnographic Case Study, Elizabeth Anne Royal Witte

Theses and Dissertations

Through this mixed methods ethnographic case study, the subject of gender stereotypes for middle school students, and its relationship to academic performance was investigated. Specifically, the research focused on Albert Bandura’s (1977) Social Learning Theory, gender stereotypes, and how educational institutions, peer relationships, and parental influences may dictate gender norms as they relate to academic success. It also attempted to evaluate the relationship between the issue of gender stereotypes and current experiences in a rural American middle school that led to the recurring issue of the educational gender gap and the underperformance of male students. The purpose of the study …

Exploratory Modeling Of Environmental And Anthropogenic Impacts On Mercury In Fish Tissue For Select Watersheds In South Carolina, Julia Mcguire

Theses and Dissertations

Fish tissue from various sampling locations in South Carolina rivers has shown elevated levels of mercury (Hg). A number of variables may impact this Hg in fish tissue and this study evaluated the impact of these variables using a predictive model. Over 341 variables were assembled from 6 different databases describing land use, water chemistry, point source pollutants, watershed characteristics and more. One dataset describes the location of historical gold mines throughout the sample site, which have been shown to increase Hg in fish tissue in other locations. The variables were assembled in ArcGIS to evaluate variable significance and to …

A Study Of Hepatic Purinergic Receptor X7 Molecular Mechanisms In Ectopic Intestinal Inflammation In Environmental Nafld, Varun Chandrashekaran

Theses and Dissertations

Due to the increased consumption of unhealthy foods rich in sugar and fat along with a highly sedentary lifestyle the prevalence of obesity has steadily increased in the United States and the rest of the world. In America about one third of the adult population is obese putting them at a greater risk for diseases such as cancer, cardio-vascular disorders, inflammation and metabolic diseases such as diabetes and non-alcoholic fatty liver disease (NAFLD). NAFLD can be classified into two major categories non-alcoholic fatty liver (NAFL) and non-alcoholic steato-hepatitis depending on the extent of damage which ranges from simple fat accumulation …

Wind Driven Shelf Circulation: Effects Of Shoreline Orientation, Bathymetry, And Surface Cooling, Xiaodong Wu

Theses and Dissertations

The dynamic region extending from the inner- to outer-shelf is the nearshore region where an accurate understanding of the development of cross-shore flows is important as they control the exchange of constituents (e.g., pollutants, larvae, heat and biota) between the coastline and the open ocean. These flows are driven by a variety of forces, including wind and buoyancy. The wind forcing relevant to shelf circulation broadly falls within the synoptic scale of storm events, consisting of frontal systems (cold and warm fronts) and tropical storms. The buoyancy on the shelf is characterized by a vertical stratification or a pronounced cross-shore …

Effects Of Language For Learning On Young Children With Autism Spectrum Disorder, Diana M. Smith

Theses and Dissertations

Language for Learning (LL) is an oral language curriculum that uses Direct Instruction (DI) methodology. DI is well researched, but only limited studies exists on the use of LL with children with autism spectrum disorder (ASD). This study used a multiple baseline research design, across four, four-year-old participants, to measure the effects of LL on the language development of young children with ASD. This study also measured the generalization of learned skills to the narrative language of the participants. Finally, changes in the participants language microstructure were analyzed throughout the study. A researcher-created acquisition probe was used to measure language …

Narrar Lo Inenarrable: Trauma, Memoria Y Dictadura En Argentina, Gloria Yaneth Losada

Theses and Dissertations

This dissertation examines new ways to think about postdictatorial memory, subjectivity, and cultural production. I explore memory discourses after the most recent military dictatorship in Argentina, compiled in three novels: El fin de la historia by Liliana Heker, La casa de los conejos by Laura Alcoba, and Diario de una princesa Montonera -110% verdad- by Mariana Eva Perez. My research concentrates on the possibility of postdictatorial cultural production being a constantly transforming space, in which the meaning of the dictatorial past is actively produced. Drawing from interdisciplinary theoretical considerations, I examine the relationship between memory and cultural production in postdictatorship …

Environmental Relationships And Predator-Prey Interactions Within The Snapper-Grouper Complex In The Southeastern U.S. Atlantic – Implications For Fisheries Management, Dawn M. Glasgow

Theses and Dissertations

Stock assessments indicate many valuable fish species are declining, or are considered overfished and/or are undergoing overfishing. Fisheries scientists and managers in the southeastern U.S. typically have utilized a single-species approach, and relied on catch per unit effort data derived from fishery-independent surveys to determine indices of abundance for economically important reef fish. However, catchability for these surveys vary for many reasons including environmental and predator-prey relationships. This research was developed to elucidate environmental influences on reef fish assemblages and distribution of reef-associated marine predators, and examine predator-prey dynamics that may influence relative abundance of large predators based on chevron …

Molecular Evolution Of Major Epidermal Structure Genes And An Integrative Transcriptome Analysis Of Chicken Epidermal Embryogenesis, Weier Bao

Theses and Dissertations

Αlpha (α) and beta (β) keratins are the major structural proteins found in vertebrate epidermis and the β-keratins are only found in reptiles and birds. With the recent published 48 avian genomes, we searched and studied the molecular evolution of these gene families. We discovered that the expansion and contraction of different α- and β- keratins among the 48 phylogenetically diverse birds supports the importance of their role in the evolution of the feathers and the adaptation of birds to different ecological niches. Using a customized 44K microarray, we also performed transcriptome analysis on different epidermal regions (scutate scale, dorsal …

Elucidation Of Protein Interactions And The Re-Tuning Of Porphyrin Electronics For Hydroxylases, Steven Charles Ratigan

Theses and Dissertations

Non-Ribosomal Peptide Synthetases (NRPSs) and their exogenous tailoring partners have been heavily studied but not in the context of non-cognate systems. Orf78, a dinuclear iron β-hydroxylase from the lysobacter pathway and homologous to CmlA from the chloramphenicol pathway, is used to test affinities for one native and two non-native T-domains. Results indicate that there is enough difference between Type I and Type II NRPS systems to disfavor common recognition motifs. Additionally, the β-hydroxylase P450sky, from the skyllamycin biosynthetic pathway, is used in conjunction with the NRPS ATdomain NikP1AT from the nikkomycin biosynthetic pathway, in lieu of the homolog P450nikQ. The …

Development Of A Sandwich Hybridization Assay For The Harmful Cyanobacteria Microcystis Spp., Nicole M. Dearth

Theses and Dissertations

Cyanobacteria are responsible for the largest number of harmful blooms (HABs) worldwide. HABs caused by the genus Microcystis pose public health threats because they often occur within close proximity to humans and produce microcystin (hepatotoxin), which can contaminate drinking water and recreational areas. Novel molecular techniques facilitate monitoring, ‘early warnings’ of HAB events, and appropriate management responses. Sandwich hybridization assay (SHA), the technique considered here, directly (no amplification) identifies and quantifies planktonic species using ribosomal RNA (rRNA)-targeted oligonucleotides. This project developed SHA for Microcystis 16S rRNA and validated the assay using laboratory cultures and samples from a multi-specific cyanobacteria bloom …

Development Of An Estrogen-Related Dietary Pattern And Lifestyle Score To Examine Breast Cancer Risk In Postmenopausal Women, Mark Andrew Guinter

Theses and Dissertations

Introduction: Studies examining the association between individual dietary components and breast cancer have been inconclusive. The use of dietary patterns is a holistic approach which may yield stronger associations. We sought to develop a dietary pattern based on an estrogen metabolite (EM) profile hypothesized to increase breast cancer risk (high unconjugated estradiol and low ratio of 2- to 16-hydroxylated EMs (2/16 ratio)). This estrogen-related dietary pattern (ERDP) was examined for associations with postmenopausal breast cancer in two study populations and was incorporated into an estrogen-related lifestyle score (ERLS) with other modifiable risk factors for breast cancer.

Methods: EM …

Investigate Genomic 3d Structure Using Deep Neural Network, Yan Zhang

Theses and Dissertations

The 3D structures of the chromosomes play fundamental roles in essential cellular functions, e.g., gene regulation, gene expression, evolution and Hi-C technique provides the interaction density between loci on chromosomes. In this dissertation, we developed multiple algorithms, focusing the deep learning approach, to study the Hi-C datasets and the genomic 3D structures.

Building 3D structure of the genome one of the most critical purpose of the Hi-C technique. Recently, several approaches have been developed to reconstruct the 3D model of the chromosomes from HiC data. However, all of the methods are based on a particular mathematical model and lack of …

Modulation Of Pkr Activity During Hiv Infection And Cellular Stress By Pact And Trbp, Evelyn E. Chukwurah

Theses and Dissertations

A crucial component of the cellular response to stress is the attenuation of protein synthesis to allow the cell to dedicate resources for the restoration of homeostasis or towards the induction of apoptotic cell death in case the stressors overwhelm the cell. This process is itself regulated by one of the four eIF2α kinases of which PKR (Protein Kinase R) is responsible for inhibiting general translation during viral infection, oxidative stress, ER stress, heat shock or serum withdrawal.

During viral infection, PKR is transcriptionally induced by interferon but remains latent until it interacts with dsRNA. This interaction induces a conformational …

Creating Equitable Access Pathways For All Students In South Carolina? A Study Of Sc International Baccalaureate Diploma Programs, Diane D. Padula

Theses and Dissertations

This case study adds insight to the idea of equitable access as it relates to advanced coursework available to students in public high schools in South Carolina. The International Baccalaureate Diploma Program (IBDP) has become a viable choice since secondary-level magnet programs in SC have taken root for over thirty years. The IBDP originally developed in SC to attract the global elite, however in the recent decade, the IBDP has morphed into a program meant for all students. The concept of IB for All is marketed as a college readiness program within South Carolina IBDP schools. Access is multidimensional; it …

The Role Of Inflammation In Atherosclerosis, Fatma Saaoud

Theses and Dissertations

Atherosclerosis is both a chronic inflammatory disease and lipid deposition disorder characterized by accumulation of lipids, fibrous tissue, and inflammatory cells in the arterial wall. Thus, investigating the role of inflammation and the immune system in the progression of atherosclerosis may help in the development of novel therapeutics for atherosclerotic disease. Current atherosclerosis therapy is aimed at lipid targets and focused primarily on reducing plasma cholesterol levels. Clinical and experimental data support the critical role of inflammation in atherosclerosis and suggest that reducing inflammation even without affecting lipid levels may reduce the event rate of cardiovascular disease. Yet, no pure …

Marine Phosphorus Biogeochemistry Ecological Insights From Analytical Chemistry, Douglas W. Bell

Theses and Dissertations

The supply of phosphorus (P) directly impacts the growth and speciation of marine microbes (i.e., phytoplankton, bacteria, Archaea). In turn, microbial communities shape the magnitude and rate of marine biogeochemical cycles, ultimately affecting global climate and food production. This dynamic reflects the continuum of temporal and spatial scales at which the marine P cycle operates. However, linking multiple scales of cycling remains a consistent challenge. The primary objective of my dissertation was to gain insight into marine P biogeochemistry, by means of analytical chemistry, at the molecular and environmental scales of cycling. The first component of my research was to …

Radioactive Contamination Of Natural Biological Systems: Oxidative Balance And Genetic Stability, Daniel Einor

Theses and Dissertations

The global demand for nuclear energy grows, and so do the risks of an accidental release of nuclear products into the environment. Therefore, understanding the health and ecological effects of contamination by radionuclides should be of great interest for biomedical specialists and the public. Empirical studies unequivocally show that high doses of ionizing radiation (IR) shift the redox-balance of many biological systems and increase the rates of genetic errors. However, the effects of chronic low doses of radiation vary significantly between tissues and between species. The present dissertation comprises the results of experimental and meta-analytical research of a variety of …

Fluorescence Polarization Measurements To Probe Alignment Of A Bithiophene Dye In One-Dimensional Channels Of Self-Assembled Phenylethynylene Bis-Urea Macrocycle Crystals, Preecha Kittikhunnatham

Theses and Dissertations

This thesis describes the use of polarized fluorescence microscopy to directly probe guest molecule orientation in bis-urea macrocycle crystals. These macrocycles assemble to afford one-dimensional (1D) microchannels ∼9 Å in diameter that have previously been shown to exhibit normal Fickian diffusion and induce selective reactivity among the confined guest molecules. In the present work, we take advantage of the quasi-1D morphology of fiber-like microcrystals with the extended dimension corresponding to the channel axis to measure excitation and emission polarization values for a bithiophene guest. Guest fluorescence is shown to be polarized along the fiber axis with emission polarization values up …

Taf2: A Potential Oncogene For Hepatocellular Carcinoma, Saranya Chidambaranathan Reghupaty

Theses and Dissertations

Astrocyte Elevated Gene 1 (AEG1) is an oncogene for hepatocellular carcinoma (HCC). Its role in HCC pathogenesis has been well studied. A pan cancer analysis of gene expression in multiple databases identified TATA-box binding protein associated factor 2 (TAF2) as the gene that is most frequently co-expressed with AEG1. TAF2 is a protein that is involved in transcription of genes by RNA polymerase II. It is a factor that is dispensable for basal transcription but, required for activated transcription. It has also been shown to be involved in regulating cyclin levels and hence cell cycle progression. Bioinformatic analysis on data …

A Systems Biology Approach For Predicting Essential Genes And Deciphering Their Dynamics Under Stress In Streptococcus Sanguinis, Fadi El-Rami

Theses and Dissertations

Infectious diseases are the top leading cause of death worldwide. Identifying essential genes, genes indispensable for survival, has been proven indispensable in defining new therapeutic targets against pathogens, major elements of the minimal set genome to be harnessed in synthetic biology, and determinants of evolutionary relationships of phylogenetically distant species. Thus, essentiality studies promise valuable revenues that can decipher much of biological complexities.

Taking advantage of the available microbial sequences and the essentiality studies conducted in various microbial models, we proposed a framework for the prediction of essential genes based on our experimentally verified knowledge of the pathways involved in …

Characterization Of The Role Of Insulin-Like Growth Factor Binding Protein 7 (Igfbp7) Using A Genetic Knockout Mouse Model, Maaged A. Akiel

Theses and Dissertations

In the US, the incidence and mortality rates of hepatocellular carcinoma (HCC) are alarmingly increasing since no effective therapy is available for the advanced disease. Activation of IGF signaling is a major oncogenic event in diverse cancers, including HCC. Insulin-like growth factor binding protein-7 (IGFBP7) inhibits IGF signaling by binding to IGF-1 receptor (IGF-1R) and functions as a potential tumor suppressor for hepatocellular carcinoma (HCC). IGFBP7 abrogates tumors by inducing cancer-specific senescence and apoptosis and inhibiting angiogenesis. We now document that Igfbp7 knockout (Igfbp7-/- ) mouse shows constitutive activation of IGF signaling, presents with pro-inflammatory and immunosuppressive microenvironment, and develops …

Relb Acts As A Molecular Switch To Drive Chronic Inflammation In Glioblastoma Multiforme (Gbm)., Michael R. Waters

Theses and Dissertations

Inflammation is a homeostatic response to tissue injury or infection, which is normally short- lived and quickly resolves to limit tissue damage. In contrast, chronic inflammation has been linked to a variety of human diseases, including cancers such as glioblastoma multiforme (GBM). GBMs are very aggressive tumors with very low patient survival rates, which have not improved in several decades. GBM tumors are characterized by necrosis and profound inflammation; with cytokines secreted by both GBM cells and the tumor microenvironment. The mechanisms by which chronic inflammation develops and persists in GBM regardless of multiple anti-inflammatory feedback loops remain elusive. This …

Expression Of Matrix Metalloproteinases In Naegleria Fowleri And Their Role In Degradation Of The Extracellular Matrix, Charlton Lam

Theses and Dissertations

Naegleria fowleri is a free-living amoeba found in freshwater lakes and ponds that is the causative agent of Primary Amoebic Meningoencephalitis (PAM). Matrix metalloproteinases (MMPs) have been described in protozoa, such as Plasmodium falciparum, Trypanosoma brucei, and Balamuthia mandrillaris, and have been linked to their increased motility and invasive capability by degrading components of the extracellular matrix (ECM). In addition, MMPs are often upregulated in tumorigenic cells and have been attributed as responsible for the metastasis of certain cancers. In the present study, in vitro experiments indicated that MMPs are linked functionally to the ECM degradation process. …

Computational All Atom Energy Density Landscape Mappings Of Intra-Protein Interactions From Static And Dynamic Ensemble Structure Data, Oscar H. Bastidas

Theses and Dissertations

Understanding the energetic and dynamic behavior of natural protein fluctuations is critical to elucidating important information associated with a multitude of protein functions including signaling processes, enzyme behavior, aggregation pathways etc... This information is also critically important in the development of novel and effective strategies aimed at target proteins associated with pathologies and disease. In order to obtain such useful information, tools and techniques are lacking that: 1) permit the efficient quantitative analysis of fluctuation behavior of existing protein structure ensembles and 2) permit computationally generated natural fluctuation states of proteins at relatively large timescales demanded by the need for …

Moderate Severity Disturbance Has Similar Effects On The Production Of Three Forests Nested Within The Upper Great Lakes Landscape, Benjamin Tai Sagara

Theses and Dissertations

Moderate severity disturbances, which only kill a subset of canopy trees (e.g., via insects, pathogens, and windthrow), are increasingly widespread, and can alter forest structure and production. Whether moderate severity disturbance similarly affects the net primary production (NPP) of different forest stands within inherently heterogeneous landscapes, however, is unknown. We experimentally disturbed three, 2-ha stands varying in forest structure and primary production, reducing stand basal area 38 to 66 % by stem girdling all mature early successional aspen (Populus) and birch (Betula). For nearly a decade, we examined how the forest stands restructured and recovered, and linked post-recovery physical and …

The Anatomy Of Cbpr: A Case Study Of Cbpr Implementation For Health Promotion With The Peer Community, Cory R. Cummings

Theses and Dissertations

This case study is a qualitative examination of a health promotion project conducted in collaboration with members of the mental health peer community. More specifically, it explores the community based participatory research (CBPR) implementation process used to conduct this health promotion project to gain a deeper understanding of the mechanisms at work in the implementation process. While there has been considerable attention to the principles that guide CBPR (Braun et al., 2012; Israel et al., 2008; LaVeaux & Christopher, 2009), there remains important work to be done in bridging these principles to implementation; what processes or mechanisms translate these principles …

The Role Of Human Msc Derived Exosomes In The Treatment Of Periodontal Diseases, Sonia S. Talegaonkar

Theses and Dissertations

Periodontal disease affects 47% of Americans over 30. Characterized by microbial dysbiosis and unregulated inflammation, severe periodontitis causes degradation of bone and soft tissue around teeth. Current treatments have limited regenerative outcomes and frequent reinfection by harmful bacteria. Human mesenchymal stem cells (hMSCs) have been shown to promote wound healing and tissue regeneration. Many therapeutic benefits of hMSCs are due to their secretome products, like exosomes. Our long-term goal is to develop periodontal therapies with hMSC exosomes. The objectives of this study were to determine the effect of hMSC-derived exosomes on cellular activity of hMSCs and investigate whether hMSC exosome …

Study Of Molecular Interactions Of Glycosaminoglycans And Glycosaminoglycan Mimetics With Their Protein Targets, Daniel K. Afosah

Theses and Dissertations

Glycosaminoglycans (GAGs) are complex linear chain carbohydrate molecules found on virtually all animal cell surfaces. Owing to their negatively charged nature, GAGs interact with a number of different proteins. Thus, although they have great potential as therapeutic agents, their apparent promiscuous interactions increase their side effect risk. GAG mimetics, including GAG oligosaccharides and non-saccharide GAG mimetics (NSGMs) are viable approaches to address this. This work discusses sulfated benzofuran thrombin inhibitors with submaximal protease inhibition, sulfated diflavonoid inhibitors of plasmin and GAG oligosaccharides with selectivity for human neutrophil elastase (HNE).

Anticoagulants are very important for the treatment of thrombotic diseases. The …

The Role Of Klf1 In Regulating Γ-Globin Gene Repressors, Anna P. Kovilakath

Theses and Dissertations

Sickle cell disease and β-thalassemia affect millions of people worldwide. γ-globin is the fetal counterpart to the adult β-globin. Research has shown that affected patients with higher than normal γ-globin show less severe symptoms. Therefore, reversing or preventing the hemoglobin switch from γ- to β- globin is a promising avenue of research for treating these diseases. KLF1 is an erythroid transcription factor involved in hemoglobin switching. Herein, we show that KLF1 directly regulates the γ-globin repressor gene LRF in both the mouse and human systems. KLF1 may also directly activate γ-globin expression by binding the promoter. In human HUDEP-2 cells, …

A Biorelevant In Vitro Model To Characterize In Vivo Release Of Bone Morphogenetic Protein-2 (Rhbmp-2), Deblina Biswas

Theses and Dissertations

Biorelevant in vitro release/dissolution tests are designed to predict the in vivo behavior of a drug and are crucial in understanding its in vivo performance. Currently, there is no standardized compendial in vitro release testing methods or regulatory guidance’s for release/dissolution testing of implants due to their complex physiological locations.Furthermore, existing compendial methods do not capture the local release profile of ‘novel’ parenterals in physiological low fluid volume surrounding areas.

Long acting and in situ forming implants with orthobiologic proteins and peptides have increased over the past few decades due to a better understanding of genetic engineering. One of these …