Digital Commons Network^™

Modeling Naturally Occurring Wildfires Across The Us Using Niche Modeling, Brandon Polk

Theses

Wildfires can cause significant damage to an area by destroying forested and agricultural areas, homes, businesses, and leading to the potential loss of life. Climate change may further increase the frequency of wildfires. Thus, developing a quick, simple, and accurate method for identifying key drivers that cause wildfires and modeling and predicting their occurrence becomes very important and urgent. Various modeling methods have been developed and applied for this purpose. The objective of this study was to identify key drivers and search for an appropriate method for modeling and predicting natural wildfire occurrence for the United States. In this thesis, …

Taking Up One's Cross With Hope: A Christian Approach To Suffering, Linda George Debrecht

Theses

The purpose of this study is to encourage a more contemporary understanding of the traditional Christian approach to suffering — the belief that we can experience great goodness and enrich our lives as a result of taking up our cross as Jesus did. This concept of "redemptive suffering" seems to be losing its viability in contemporary life. Instead, advancing support for the Assisted Suicide movement reflects a growing sense that suffering is a "problem" that can be "solved" even if it means taking one's own life. The author contends that a more contemporary understanding of Jesus' suffering — one that …

Network Exploration Of Correlated Multivariate Protein Data For Alzheimer's Disease Association, Matthew J. Lane

Theses

Alzheimer Disease (AD) is difficult to diagnose by using genetic testing or other traditional methods. Unlike diseases with simple genetic risk components, there exists no single marker determining as to whether someone will develop AD. Furthermore, AD is highly heterogeneous and different subgroups of individuals develop the disease due to differing factors. Traditional diagnostic methods using perceivable cognitive deficiencies are often too little too late due to the brain having suffered damage from decades of disease progression. In order to observe AD at early stages prior to the observation of cognitive deficiencies, biomarkers with greater accuracy are required. By using …

Damar On Fridays, Maja Sadikovic

Theses

Abstract

These poems are about the first hand witnessing of the Balkan war and its visceral repercussions, ripping of families across generations and continents due to religious intolerance, and an identity crisis within the diaspora of the former Yugoslav people. They interact with appeals of loss, in terms of bodies, memory, and material, despair within the identity of the self in and outside of religion, and the perception of love and belonging, but not necessarily in that order. They are largely inspired by victim story-telling, translations of conversations with natives of the former Yugoslavia and their children, and ramifications of …

The Epistemic Status Of Moral Conceptual Truths, Kara D. Boschert

Theses

Evolutionary debunking arguments assume that morality could, conceptually speaking, be about anything. A response to this contention is that there are some moral conceptual truths which counter assertions that we could be in error about basic moral truths. According to proponents of moral conceptual truths, some things, by definition, cannot count as moral. Putative moral conceptual truths, such as “stealing is wrong,” are thought to enjoy a privileged epistemic status because anyone who denies them forfeits their ability to engage in competent moral reasoning. This paper explores whether moral conceptual truths can offer a satisfactory response to the debunkers’ premise …

Wave Energy Assessment In Southern Central Java Island And Control Method For Maximizing The Captured Power In Wave Energy Converters, Fatima Sultan Ghdayer Ali Alaryani

Theses

This thesis discusses the wave energy potential of the Indian Ocean on the south coast of Central Java Island, where no previous known similar study has been conducted. A control technique that involves a dynamic electrical model was established. The following objectives were achieved. The first was to determine the ideal location to implement wave energy conversion (WEC), and the second objective was to simulate the significant wave height by using the novel control method.

To achieve these goals, the following steps and procedures were implemented. Wave energy assessment was conducted for the Indian Ocean on the south coast of …

Effects Of Environmental Diesel Exhaust Particles On Gastric Stem Cells, Heba Ahmed Mazen Al Sadik

Theses

I would like to express my special thanks to the General Secretariat of the Executive Council of Abu Dhabi Emirate and Abu Dhabi National Oil Company (ADNOC) for their input and support. Last, but certainly not least, these acknowledgments would be incomplete without expressing my deepest appreciation to my family. Special acknowledgment of this achievement goes to my parents, who not only showed me unconditional love, acceptance, and respect for the person that I am throughout my life, they also showed me the strength of character which has brought me to where I am today. To my wife, for her …

Performance Study For Capillary Machine-To-Machine Networks, Maisaa Othman Albaghdadi

Theses

Communication technologies witness a wide and rapid pervasiveness of wireless machine-to-machine (M2M) communications. It is emerging to apply for data transfer among devices without human intervention. Capillary M2M networks represent a candidate for providing reliable M2M connectivity. In this thesis, we propose a wireless network architecture that aims at supporting a wide range of M2M applications (either real-time or non-real-time) with an acceptable QoS level. The architecture uses capillary gateways to reduce the number of devices communicating directly with a cellular network such as LTE. Moreover, the proposed architecture reduces the traffic load on the cellular network by providing capillary …

Short-Term Bilateral Adrenalectomy: Biochemical And Morphological Alterations In The Rat Hippocampus, Ahlam Said Abi Issa

Theses

Several studies showed the effects of glucocorticoid hormones on the hippocampus. It has been reported that the chronic administration of high dose glucocorticoids (GC) results in the degeneration of pyramidal neurons. However, bilateral adrenalectomy has been shown to damage the hippocampal neurons. Although the effects of long-term adrenalectomy have been studied extensively, there are few publications on the effects of short-term bilateral adrenalectomy (ADX). We aimed to investigate the effects of ADX on levels of pro-inflammatory cytokines interleukin-1β (IL-1β), interkeukin-6 (IL-6) and tumor necrosis factor-α (TNF-α); levels of growth factors, response of microglia and astrocytes to neuronal death, and oxidative …

Modeling The Mitigation Of Seawater Intrusion By Pumping Brackish Water From The Coastal Aquifer Of Wadi Ham, Uae, Modou A Sowe

Theses

The control and management of seawater intrusion in coastal aquifers is a major challenge in the field of water resources management. Seawater intrusion is a major problem in the coastal aquifer of Wadi Ham, United Arab Emirates caused by intensive groundwater abstraction from increased agricultural activities. This has caused the abonnement of salinized wells and ultimately affected farming activities and domestic water supply in the area. In this study, the 3D finite element groundwater flow and solute transport model, FEFLOW was used to simulate pumping of brackish water from the intrusion zone to control seawater intrusion in the aquifer. The …

Mobile Big Data Analytics In Healthcare, Alramzana Nujum Navaz

Theses

Mobile and ubiquitous devices are everywhere around us generating considerable amount of data. The concept of mobile computing and analytics is expanding due to the fact that we are using mobile devices day in and out without even realizing it. These mobile devices use Wi-Fi, Bluetooth or mobile data to be intermittently connected to the world, generating, sending and receiving data on the move. Latest mobile applications incorporating graphics, video and audio are main causes of loading the mobile devices by consuming battery, memory and processing power. Mobile Big data analytics includes for instance, big health data, big location data, …

Microbial Degradation Of Various Organic Pollutants Using Bacteria Isolated From Petroleum Sludge, Manal Ali Alhefeiti

Theses

Intensification of agriculture and manufacturing industries has resulted in increased release of a wide range of xenobiotic compounds to the environment. The extensive discharge of hazardous waste in industrial wastewater and the recalcitrant nature of some of these organic pollutants have fueled a strong interest in exploring efficient and environmentally friendly approaches for wastewater remediation. Bioremediation approaches can provide efficient, inexpensive and environmentally safe cleanup tools. In the present study, our main objective was to isolate novel bacterial strains from UAE petroleum sludge and to examine their abilities to degrade various aromatic pollutants, including azo dyes and emerging pollutants. We …

Machine Learning Based Autism Detection Using Brain Imaging, Gajendra Jung Katuwal

Theses

Autism Spectrum Disorder (ASD) is a group of heterogeneous developmental disabilities that manifest in early childhood. Currently, ASD is primarily diagnosed by assessing the behavioral and intellectual abilities of a child. This behavioral diagnosis can be subjective, time consuming, inconclusive, does not provide insight on the underlying etiology, and is not suitable for early detection. Diagnosis based on brain magnetic resonance imaging (MRI)—a widely used non- invasive tool—can be objective, can help understand the brain alterations in ASD, and can be suitable for early diagnosis. However, the brain morphological findings in ASD from MRI studies have been inconsistent. Moreover, there …

The Role Of Estrogen In Mouse Gastric Stem Cell Homeostasis, Aysha Mohamed Yusuf Alkaabi

Theses

To maintain cellular homeostasis, the epithelial lining of the stomach wall continuously fluctuates between cellular proliferation, differentiation, and apoptosis. A key player in this process is the gastric stem cell (GSC). GSCs are located in the isthmus region of the corpus gastric gland and have the potential to proliferate and differentiate. Although several pathways have been identified to regulate stem cell role in several body tissues, little is known about controlling GSC homeostasis. This project aims to study the role of estrogen (E2) in GSC homeostasis using the well-established mouse gastric epithelial progenitor (mGEP) cell line. Our data showed that …

Alternative Processor Within Threshold: Flexible Scheduling On Heterogeneous Systems, Stavan Satish Karia

Theses

Computing systems have become increasingly heterogeneous contributing to higher performance and power efficiency. However, this is at the cost of increasing the overall complexity of designing such systems. One key challenge in the design of heterogeneous systems is the efficient scheduling of computational load. To address this challenge, this paper thoroughly analyzes state of the art scheduling policies and proposes a new dynamic scheduling heuristic: Alternative Processor within Threshold (APT). This heuristic uses a flexibility factor to attain efficient usage of the available hardware resources, taking advantage of the degree of heterogeneity of the system. In a GPU-CPU-FPGA system, tested …

Advanced Music Audio Feature Learning With Deep Networks, Madeleine Daigneau

Theses

Music is a means of reflecting and expressing emotion. Personal preferences in music vary between individuals, influenced by situational and environmental factors. Inspired by attempts to develop alternative feature extraction methods for audio signals, this research analyzes the use of deep network structures for extracting features from musical audio data represented in the frequency domain. Image-based network models are designed to be robust and accurate learners of image features. As such, this research develops image-based ImageNet deep network models to learn feature data from music audio spectrograms. This research also explores the use of an audio source separation tool for …

Plasma Metabolites Reveal Changes In Physiological State Of Eared Grebes (Podiceps Nigricollis) During Three Non-Migratory Periods, Allison A. Yoshida

Theses

Energy storage and use during the annual cycle of migratory birds is dynamic especially during migration. However, considerable amounts of the annual cycle are spent not migrating, and the physiological state of birds during these non-migratory periods is not well understood. We compared plasma metabolites (TRIG, BUTY, URIC, GLY) in Eared Grebes (Podiceps nigricollis) residing at three important areas when they are not migrating: fall staging (postbreeding at Mono Lake, California), spring staging (pre-breeding at Great Salt Lake, Utah), and an extended stopover prior to spring staging (Salton Sea, California). Plasma metabolites were also measured in resting and active grebes …

Deep Learning Architectures For Novel Problems, Felipe Petroski Such

Theses

With convolutional neural networks revolutionizing the computer vision field it is important to extend the capabilities of neural-based systems to dynamic and unrestricted data like graphs. Doing so not only expands the applications of such systems, but also provide more insight into improvements to neural-based systems.

Currently most implementations of graph neural networks are based on vertex filtering on fixed adjacency matrices. Although important for a lot of applications, vertex filtering restricts the applications to vertex focused graphs and cannot be efficiently extended to edge focused graphs like social networks. Applications of current systems are mostly limited to images and …

Source-Channel Coding For Coordination Over A Noisy Two-Node Network, Sarah A. Obead

Theses

Recently, the concept of coordinating actions between distributed agents has emerged in the information theory literature. It was first introduced by Cuff in 2008 for the point-to-point case of coordination. However, Cuff’s work and the vast majority of the follow-up research are based on establishing coordination over noise-free communication links. In contrast, this thesis investigates the open problem of coordination over noisy point-to-point links. The aim of this study is to examine Shannon’s source-channel separation theorem in the context of coordination. To that end, a general joint scheme to achieve the strong notion of coordination over a discrete memoryless channel …

Otolith Morphologies In The Genus Sinocyclocheilus, Iqra Iqbal

Theses

Sinocyclocheilus is a genus of Cyprinid fish found in southern China. This genus contains 68 species of which 40 species have adaptations for life in cave habitats. A common adaptation seen in fish that live in caves with no light is the loss of vision. Such cavefish must therefore rely on other sensory modalities to capture prey, communicate between conspecifics, and potentially avoid predators. Previous studies have identified sensory adaptations in cavefish, including the increase in size and number of mechanoreceptors. Sinocyclocheilus are hearing specialists, and it is possible that cave species of this genus have increased reliance on hearing …

Eis Analysis Of Shear Enhanced Microfluidic Lab-On-A-Chip Device, Mehnaz Mursalat

Theses

Electrochemical sensors and biosensors have received much attention owing to the feasibility demonstrated regarding instrumental simplicity, decent cost, and portability during the detection of a wide range of biological and pharmaceutical macromolecules. Carbon-based nanomaterials, including carbon nanotubes, have garnered tremendous interest for their unique thermal, mechanical, electronic and catalytic properties while designing these sensors. Whenever the macromolecules interact with a bio-recognition element on the electrode transducer surface, a measurable change in the electrical current or potential takes place. To achieve lower limits of detection, the use of sensor surfaces modified with nanostructured materials such as nanotubes, or nanoparticles is becoming …

Changes In Morphology During The Development Of The Horn And Hump Of The Chinese Cavefish Sinocyclocheillus Furcodorsalis, Michelle Pluviose

Theses

The genus Sinocyclocheilus endemic to southern China and contains many cavefish species. There are approximately sixty species, of which roughly forty are cave-adapted. Cave Sinocyclocheilus are characterized not only by lack of pigmentation and eyes depending on the species, but also by a unique prominent horn on the top of the skull and dorsal hump rostral under the dorsal fin. The horn and the hump are generally considered troglomorphic characteristics, although their functions are still elusive. Here, the development of these distinctive structures in the species, S. furcodorsalis, was examined by using micro CT scans. The horn of the …

Novel Experimental Method For The Determination Of The Minimum Agitation Speed For Solids Suspension In Flat-Bottomed Stirred Tank Reactors, Shriarjun Shastry

Theses

Knowledge of the minimum agitation speed, Njs, required to suspend finely divided solids in vessels stirred by an impeller is a critical parameter to properly operate industrial tanks in a large number of industrial operations. The most common experimental approach to measure N_js is that of Zwietering’s (Chem. Eng. Sci., 1958, 8, 244-253), consisting of visually inspecting the tank bottom and visually determining the impeller agitation speed at which the solids are observed to rest on the tank bottom for no more than 1-2 seconds before being swept away. This method is quite reliable, but a method …

Real Time, Integrated, Paper Based Temperature Sensor For Lab On A Chip Device, Vignesh Shekhar

Theses

Temperature measurement and manipulation is a critical factor in a wide range of applications like Point Of Care Diagnostics (POC's), Polymerase Chain Reaction (PCR), Temperature Gradient Focusing (TGF) to cite few prominent examples. In the past decade, researchers have used various techniques to sense and control the temperature in microfluidic systems. The primary challenge has been the twin problem of integration and accuracy using minimal equipment while keeping it simple. In this study, an equipment free fabrication of the temperature sensor using filter paper impregnated with p-type colloidal PbS quantum dots is demonstrated. This sensor is later integrated into line …

Development, Validation, And Clinical Application Of A Numerical Model For Pulse Wave Velocity Propagation In A Cardiovascular System With Application To Noninvasive Blood Pressure Measurements, Jeffrey S. Lillie

Theses

High blood pressure blood pressure is an important risk factor for cardiovascular disease and affects almost one-third of the U.S. adult population. Historical cuff-less non-invasive techniques used to monitor blood pressure are not accurate and highlight the need for first principal models. The first model is a one-dimensional model for pulse wave velocity (PWV) propagation in compliant arteries that accounts for nonlinear fluids in a linear elastic thin walled vessel. The results indicate an inverse quadratic relationship (R^2=.99) between ejection time and PWV, with ejection time dominating the PWV shifts (12%). The second model predicts the general relationship between PWV …

Low Cost, Multi-Purpose Genotyping Panels For Dairy And Beef Cattle, Michelle Judge

Theses

rhe selection of animals based on DNA has revolutionised animal breeding, but the associated high cost of obtaining genotypes has limited its uptake. The objective of this thesis was to develop a low-cost, low-density, multi-purpose genotyping panel for the procurement of reliable genotype information, and to quantify the long-term consequences of using such low-density genotype panels in breeding programs. The objectives were achieved through a combination of real-life cattle genotype data and simulations to mimic a cattle population. The in-silico development of genotype panels was based on actual genotypes from up to 58,705 beef cattle. Alternative novel strategies were used …

Microbiota, Diet And Medication In Human Gut Disorders, Adam Clooney

Theses

The microbiota, a community of micro-organisms in a particular environment, have been intensely researched in the past decade and interest appears to continue to increase. The human body is richly populated with bacterial cells (3.8x10'^) and alterations in these communities are associated with disease. The work presented in this thesis explores aspects of microbiota research methodologies with regard to optimisation and concerns over a lack of reproducibility. Additionally, we investigated the effects of medication, in particular Proton Pump Inhibitors, on the human gut microbiota, along with comparisons between the microbiota of patients with active and inactive Inflammatory Bowel Disease.

Microbiota …

Automating The Milking Process Within A Grass-Based System, John Shortall

Theses

The successful integration of automatic milking (AM) and grazing has resulted in AM becoming a feasible alternative to conventional milking (CM) in pasture-based systems. The objective of this thesis was to establish (i) the social, environmental and economic effects of adopting AM technology and (ii) the factors affecting cow traffic, which once the AM is adopted, can also impact on the sustainability of AM. A theme across this thesis is the examination of AM in the context of a seasonal pasture-based milk production system. Electricity and water meters were installed on seven AM fanns. Milking and livestock/^miscellaneous processes were the …

The Development Of New Molecular Tools To Detect Mycobacterium Avium Subspecies Paratuberculosis From A Bovine Faecal Environment By Real-Time Pcr, Marcel De Kruijf

Theses

The slow-growing intracellular pathogen Mycobacterium avium subspecies paratuberculosis (MAP) causes Johne’s disease in domesticated and wild ruminants. Johne’s disease inflicts severe annual economic losses to the dairy industry worldwide. This thesis is divided into five chapters that consist of a literature review' chapter and four experimental chapters focusing on MAP strain genotyping and the development of novel molecular MAP detection tools using real-time PCR. Chapter 1 describes published information regarding MAP characteristics, Johne’s disease, MAP genomes, available MAP detection methods, MAP epidemiology and genotyping.

To efficiently control and monitor MAP infection, molecular t>ping of MAP strains provides extensive knowledge …

An Analysis Of The Physiological And Psychological Wellbeing Of Irish Naval Service Personnel, Cliodhna Sargent

Theses

Whilst all military cohorts have been seen to experience both physiological and psychological stressors during occupational duties, the naval service experience different stressors due the prolonged periods of time spent at sea. Research has analysed some of these stressors however many them have focused on how individuals are affected because of time spent in combat zones. The Irish Naval Service (INS) is an organisation under the Irish Defence Forces organisation and as such many of its physiological and psychological assessment procedures have come from the Defenee Forces. Very limited researeh has been carried out in relation to the INS as …