Digital Commons Network^™

Innervation Of Gill Lateral Cells In The Bivalve Mollusc Crassostrea Virginica Affects Cellular Membrane Potential And Cilia Activity, Edward J. Catapane, Michael Nelson, Trevon Adams, Margaret A. Carroll

Publications and Research

Gill lateral cells of Crassostrea virginica are innervated by the branchial nerve, which contains serotonergic and dopaminergic fibers that regulate cilia beating rate. Terminal release of serotonin or dopamine results in an increase or decrease, respectively, of cilia beating rate in lateral gill cells. In this study we used the voltage sensitive fluorescent probe DiBAC4(3) to quantify changes in gill lateral cell membrane potential in response to electrical stimulation of the branchial nerve or to applications of serotonin and dopamine, and correlate these changes to cilia beating rates. Application of serotonin to gill lateral cells caused prolonged membrane depolarization, similar …

The Influence Of Religion On Science: The Case Of The Idea Of Predestination In Biospeleology., Aldemaro Romero Jr.

Publications and Research

Evolution has always been considered a battleground between religion and science. Despite that perception, there are some indications that religious beliefs have in uenced and continue to in uence some current interpretations in evolutionary biology. To that end I present evidence on how pervasive the theological idea of predestination, which has been long discussed in the the Jewish, Christian and Muslim traditions, has in uenced some of the elucidations of the nature of biological evolution. I will concentrate on the history of ideas about the evolution of cave organisms to epitomize the strong in uence of religion on some evolutionary …

Spatial Engineering Of Osteochondral Tissue Constructs Through Microfluidically Directed Differentiation Of Mesenchymal Stem Cells, Stephen M. Goldman, Gilda A. Barabino

Publications and Research

The development of tissue engineered osteochondral units has been slowed by a number of technical hurdles associated with recapitulating their heterogeneous nature ex vivo. Subsequently, numerous approaches with respect to cell sourcing, scaffolding composition, and culture media formulation have been pursued, which have led to high variability in outcomes and ultimately the lack of a consensus bioprocessing strategy. As such, the objective of this study was to standardize the design process by focusing on differentially supporting formation of cartilaginous and bony matrix by a single cell source in a spatially controlled manner within a single material system. A cell-polymer solution …

Epigenetic Profiles Signify Cell Fate Plasticity In Unipotent Spermatogonial Stem And Progenitor Cells, Ying Liu, Eugenia G. Giannopoulou, Duacheng Wen, Ilaria Falciatori, Oliver Elemento, C. David Allis, Shahin Rafii, Marco Seandel

Publications and Research

Spermatogonial stem and progenitor cells (SSCs) generate adult male gametes. During in vitro expansion, these unipotent murine cells spontaneously convert to multipotent adult spermatogonial-derived stem cells (MASCs). Here we investigate this conversion process through integrative transcriptomic and epigenomic analyses. We find in SSCs that promoters essential to maintenance and differentiation of embryonic stem cells (ESCs) are enriched with histone H3-lysine4 and -lysine 27 trimethylations. These bivalent modifications are maintained at most somatic promoters after conversion, bestowing MASCs an ESC-like promoter chromatin. At enhancers, the core pluripotency circuitry is activated partially in SSCs and completely in MASCs, concomitant with loss of …

Molecular Self-Assembly Strategy For Generating Catalytic Hybrid Polypeptides, Yoshiaki Maeda, Justin Fang, Yasuhiro Ikezoe, Douglas H. Pike, Vikas Nanda, Hiroshi Matsui

Publications and Research

Recently, catalytic peptides were introduced that mimicked protease activities and showed promising selectivity of products even in organic solvents where protease cannot perform well. However, their catalytic efficiency was extremely low compared to natural enzyme counterparts presumably due to the lack of stable tertiary fold. We hypothesized that assembling these peptides along with simple hydrophobic pockets, mimicking enzyme active sites, could enhance the catalytic activity. Here we fused the sequence of catalytic peptide CP4, capable of protease and esterase-like activities, into a short amyloidogenic peptide fragment of Aβ. When the fused CP4-Aβ construct assembled into antiparallel β- sheets and amyloid …

Biofluorescence In Catsharks (Scyliorhinidae): Fundamental Description And Relevance For Elasmobranch Visual Ecology, David F. Gruber, Ellis R. Loew, Dimitri D. Deheyn, Derya Akkaynak, Jean P. Gaffney, W. Leo Smith, Matthew P. Davis, Jennifer H. Stern, Vincent A. Pieribone, John S. Sparks

Publications and Research

Biofluorescence has recently been found to be widespread in marine fishes, including sharks. Catsharks, such as the Swell Shark (Cephaloscyllium ventriosum) from the eastern Pacific and the Chain Catshark (Scyliorhinus retifer) from the western Atlantic, are known to exhibit bright green fluorescence. We examined the spectral sensitivity and visual characteristics of these reclusive sharks, while also considering the fluorescent properties of their skin. Spectral absorbance of the photoreceptor cells in these sharks revealed the presence of a single visual pigment in each species. Cephaloscyllium ventriosum exhibited a maximum absorbance of 484 ± 3 nm and an absorbance range at half …

Religious Involvement And Psychological Stress As Predictors Of Dental Health, Yung Y. Chen, Anty Lam

Publications and Research

Religious involvement has been linked to many indicators of health, including longevity. Previous research has identified psychological stress as a possible mediator for the positive effects of religion on health. Fewer studies have investigated the potential relationship between these psychosocial factors and dental health. This study examined religious involvement, stress, and dental health in a community sample. Participants included 150 community residents who received dental care as part of the study. Results indicated a significant positive association between religiousness and dental health, and a negative association between stress and dental health. These findings encourage further research on religion, stress, and …

Timing Of Caffeine Therapy And Neonatal Outcomes In Preterm Infants: A Retrospective Study, Ivan Hand, Nahla Zaghloul, Lily Barash, Rudolph Parris, Ulrika Aden, Hsiu-Ling Li

Publications and Research

Caffeine is widely used to treat apnea of prematurity. Here, we evaluated the efficacy of early caffeine (1-2 DOL) in decreasing the incidence of adverse neonatal outcomes. Methods. A retrospective cohort was used to compare the neonatal morbidity of 150 preterm neonates with gestational age ≤29 weeks. Infants were divided into 3 groups based on the initiation timing of caffeine therapy; (1) early caffeine (1-2 DOL), (2) late caffeine (3–7 DOL), and (3) very late caffeine (≥8 DOL). Results. The neonatal outcomes of early caffeine were comparable with those of the late caffeine group. Moreover, when comparing the neonatal morbidity …

Self-Identified Feminist Mothers' Naming Practices For Their Children: Accepting Being "As Feminist As Everyone" Else, Amy Eshleman, Jean Halley

Publications and Research

In this study, we apply the complexities of feminism to feminists’ choices regarding the surnames of their children. Along with other progressive movements, feminism acknowledges that names matter. Across diverse perspectives within feminism, we do not want to be called girls, but women. We do not want to be called chairmen, but chair or chairperson. We want the title we earned, Dr., or the title we share with all women, Ms., not Miss or Mrs. Given this awareness, and given feminist scholars’ privileged position in the world, we examine the often-patrilineal naming decisions of self-identified feminist faculty members.

From Mollusks To Medicine: A Venomics Approach For The Discovery And Characterization Of Therapeutics From Terebridae Peptide Toxins, Aida Verdes, Prachi Anand, Juliette Gorson, Stephen Jannetti, Patrick Kelly, Abba Leffler, Danny Simpson, Girish Ramrattan, Mandë Holford

Publications and Research

Animal venoms comprise a diversity of peptide toxins that manipulate molecular targets such as ion channels and receptors, making venom peptides attractive candidates for the development of therapeutics to benefit human health. However, identifying bioactive venom peptides remains a significant challenge. In this review we describe our particular venomics strategy for the discovery, characterization, and optimization of Terebridae venom peptides, teretoxins. Our strategy reflects the scientific path from mollusks to medicine in an integrative sequential approach with the following steps: (1) delimitation of venomous Terebridae lineages through taxonomic and phylogenetic analyses; (2) identification and classification of putative teretoxins through omics …

Associations Of Birth Order With Early Adolescent Growth, Pubertal Onset, Blood Pressure And Size: Evidence From Hong Kong’S “Children Of 1997” Birth Cohort, Man Ki Kwok, Gabriel M. Leung, C. Mary Schooling

Publications and Research

Background: Birth order has been proposed as a cardiovascular risk factor, because the lower birth weight and greater infant weight gain typical of firstborns could programme metabolism detrimentally.

Methods: We examined the associations of birth order (firstborn or laterborn) with birth weight-for-gestational age, length/height and body mass index (BMI) z-scores during infancy, childhood, and puberty using generalized estimating equations, with age at pubertal onset using interval- censored regression and with age-, sex- and height-standardized blood pressure, height and BMI z-scores at 13 years using linear regression in a population-representative Chinese birth cohort: “Children of 1997” (n = 8,327).

Results: Compared …

Characterization Of The Ftsz C-Terminal Variable (Ctv) Region In Z-Ring Assembly And Interaction With The Z-Ring Stabilizer Zapd In E. Coli Cytokinesis, Kuo-Hsiang Huang, Aaron Mychack, Lukasz Tchorzewski, Anuradha Janakiraman

Publications and Research

Polymerization of a ring-like cytoskeletal structure, the Z-ring, at midcell is a highly conserved feature in virtually all bacteria. The Z-ring is composed of short protofilaments of the tubulin homolog FtsZ, randomly arranged and held together through lateral interactions. In vitro, lateral associations between FtsZ protofilaments are stabilized by crowding agents, high concentrations of divalent cations, or in some cases, low pH. In vivo, the last 4–10 amino acid residues at the C-terminus of FtsZ (the C-terminal variable region, CTV) have been implicated in mediating lateral associations between FtsZ protofilaments through charge shielding. Multiple Z-ring associated proteins (Zaps), also promote …

Titanocene−Gold Complexes Containing N‑Heterocyclic Carbene Ligands Inhibit Growth Of Prostate, Renal, And Colon Cancers In Vitro, Yiu Fung Mui, Jacob FernáNdez-Gallardo, Benelita T. Elie, Ahmed Gubran, Irene Maluenda, Mercedes Sanau, Marıá Contel

Publications and Research

We report on the synthesis, characterization, and stability studies of new titanocene complexes containing a methyl group and a carboxylate ligand (mba = −OC(O)-p-C6H4-S−) bound to gold(I)−N-heterocyclic carbene fragments through the thiolate group: [(η5-C5H5)2TiMe(μ-mba)Au(NHC)]. The cytotoxicities of the heterometallic compounds along with those of novel monometallic gold−N-heterocyclic carbene precursors [(NHC)Au(mbaH)] have been evaluated against renal, prostate, colon, and breast cancer cell lines. The highest activity and selectivity and a synergistic effect of the resulting heterometallic species was found for the prostate and colon cancer cell lines. The colocalization of both titanium and gold metals (1:1 ratio) in PC3 prostate cancer …

Comparative Error-Free And Error-Prone Translesion Synthesis Of N2‑2′-Deoxyguanosine Adducts Formed By Mitomycin C And Its Metabolite, 2,7-Diaminomitosene, In Human Cells, Arindam Bose, Chaitra Surugihalli, Paritosh Pande, Elise Champeil, Ashis K. Basu

Publications and Research

Mitomycin C (MC) is a cytotoxic and mutagenic antitumor agent that alkylates DNA upon reductive activation. 2,7-Diaminomitosene (2,7-DAM) is a major metabolite of MC in tumor cells, which also alkylates DNA. MC forms seven DNA adducts, including monoadducts and inter- and intrastrand cross-links, whereas 2,7-DAM forms two monoadducts. Herein, the biological effects of the dG-N2 adducts formed by MC and 2,7-DAM have been compared by constructing single-stranded plasmids containing these adducts and replicating them in human embryonic kidney 293T cells. Translesion synthesis (TLS) efficiencies of dG-N2-MC and dG-N2-2,7-DAM were 38 ± 3 and 27 …

Feral And Isolated Children From Herodotus To Akbar To Hesse: Heroes, Thinkers, And Friends Of Wolves, Karl Steel

Publications and Research

"In 1304, a small child of Hesse was taken by wolves, and lived with them for a while, eating well, learning to run on all fours, perhaps joining them in their raids on sheep and humans, until he was taken by hunters and forced to live, unhappily, in human society, compelled to learn to walk upright, and exhibited as a spectacle. This account, almost certainly legendary, belongs to a small set of similar stories of feral children from roughly the same time, which, unlike so many modern accounts of wild children, are not about isolation, deprivation, or a catastrophic separation …

Integrated Systems Biology Analysis Of Transcriptomes Reveals Candidate Genes For Acidity Control In Developing Fruits Of Sweet Orange (Citrus Sinensis L. Osbeck), Dingquang Huang, Yihong Zhao, Minghao Cao, Liang Qiao, Zhi-Liang Zheng

Publications and Research

Organic acids, such as citrate and malate, are important contributors for the sensory traits of fleshy fruits. Although their biosynthesis has been illustrated, regulatory mechanisms of acid accumulation remain to be dissected. To provide transcriptional architecture and identify candidate genes for citrate accumulation in fruits, we have selected for transcriptome analysis four varieties of sweet orange (Citrus sinensis L. Osbeck) with varying fruit acidity, Succari (acidless), Bingtang (low acid), and Newhall and Xinhui (normal acid). Fruits of these varieties at 45 days post anthesis (DPA), which corresponds to Stage I (cell division), had similar acidity, but they displayed differential acid …

Effects Of Choline On Dna Methylation And Macronutrient Metabolic Gene Expression In In Vitro Models Of Hyperglycemia, Xinyin Jiang, Esther Greenwald, Chauntelle Jack-Roberts

Publications and Research

Choline is an essential nutrient that plays an important role in lipid metabolism and DNA methylation. Studies in rodents suggest that choline may adversely affect glycemic control, yet studies in humans are lacking. Using the human hepatic and placental cells, HepG2 and BeWo, respectively, we examined the interaction between choline and glucose treatments. In HepG2 cells, choline supplementation (1 mM) increased global DNA methylation and DNA methyltransferase expression in both low-glucose (5 mM) and high-glucose (35 mM) conditions. Choline supplementation increased the expression of peroxisomal acyl-coenzyme A oxidase 1 (ACOX1), which mediates fatty acid β-oxidation, especially in the high-glucose condition. …

Discovery And Characterisation Of A Novel Toxin From Dendroaspis Angusticeps, Named Tx7335, That Activates The Potassium Channel Kcsa, Ivan O. Rivera-Torres, Tony B. Jin, Martine Cadene, Brian T. Chait, Sébastien F. Poget

Publications and Research

Due to their central role in essential physiological processes, potassium channels are common targets for animal toxins. These toxins in turn are of great value as tools for studying channel function and as lead compounds for drug development. Here, we used a direct toxin pull-down assay with immobilised KcsA potassium channel to isolate a novel KcsA-binding toxin (called Tx7335) from eastern green mamba snake (Dendroaspis angusticeps) venom. Sequencing of the toxin by Edman degradation and mass spectrometry revealed a 63 amino acid residue peptide with 4 disulphide bonds that belongs to the three-finger toxin family, but with a unique modification …

Affirmative Action Debates In American Government Introductory Textbooks, Sherrie L. Wallace, Marcus D. Allen

Publications and Research

Affirmative action debates remain hotly contested across America. Given how the topic is presented in respective disciplines and core textbooks, students are often misinformed. Introductory textbooks may be one of the few places where students are exposed to significant discussions on affirmative action. In this study, we examine affirmative action policy in American government introductory textbooks published between 2005 and 2014. Our study is modeled on previous, similar analyses of introductory textbooks. We use content analysis to examine the extent to which affirmative action discussions challenge or reinforce affirmative action myths and meritocracy. We conclude that textbook discussions that emphasize …

The Impact Of Academic Service Learning On Community College Students, Sharon S. Ellerton, Sandy Figueroa, Peter Fiume, Debra Greenwood

Publications and Research

Although research clearly indicates that academic service-learning provides multiple benefits to college students in baccalaureate institutions, there is less known about its impact on community college students; a population who may benefit the most from this pedagogy. Four faculty members from four different community colleges within the City University of New York incorporated service-learning into their classrooms while also maintaining control classes. Quantitative survey data on student civic engagement and college skills were collected and survey responses from those students that did, and did not, participate in service-learning were compared. The data demonstrated meaningful differences between the non-service-learners and service-learning …

High Impact Practices: Student Engagement And Retention, Giselle Bonet, Barbara R. Walters

Publications and Research

Community college students face special challenges that can impede their academic progress, resulting in lower grades and persistence than students in selective four-year colleges. Kingsborough Community College in Brooklyn, New York, successfully addresses these challenges with learning communities: small cohorts of students in a blocked program of study, which includes developmental or basic English, a one-credit student skills course, and a social or behavioral science course. This research analyzes the short-term effects of the model by comparing a sample of 267 students enrolled in four learning community and four regular sections of sociology and psychology classes. The results demonstrate a …

Inquiry Into The Implementation Of Bush’S Executive Order 13211 And The Impact On Environmental And Public Health Regulation, Elizabeth Ann Glass Geltman, Gunwant Gill, Miriam Jovanovic

Publications and Research

Executive Order 13211, promulgated in 2001, requires the federal government to consider the impact of federal action on energy independence as part of the George W. Bush’s National Energy Policy. This law review examines whether EO 13211 was used to curtail environmental protection and natural resource conservation. The article begins with a review of the procedure required of federal agencies under EO 13211 and its associated documents. The paper then examines case law and published federal rulemaking proceedings and examines how federal agencies apply tests to evaluate the potential energy effect. The study concludes that EO 13211 strikes a reasonable …

Diversity-Dependent Cladogenesis Throughout Western Mexico: Evolutionary Biogeography Of Rattlesnakes (Viperidae: Crotalinae: Crotalus And Sistrurus), Christopher Blair, Santiago Sánchez-Ramírez

Publications and Research

Rattlesnakes (Crotalus and Sistrurus) represent a radiation of approximately 42 species distributed throughout the New World from southern Canada to Argentina. Interest in this enigmatic group of snakes continues to accrue due, in part, to their ecomorphological diversity, contributions to global envenomations, and potential medicinal importance. Although the group has garnered substantial attention from systematists and evolutionary biologists for decades, little is still known regarding patterns of lineage diversification. In addition, few studies have statistically quantified broad-scale biogeographic patterns in rattlesnakes to ascertain how dispersal occurred throughout the New World, particularly among the different major biomes of the …

Disciplines, Institutions—And Desires, Will Stockton, Mario Digangi, Ruth Mazo Karras, Melissa E. Sanchez

Publications and Research

Will Stockton: I would like to begin by asking you to consider the chiasmus under which we gather: “Desiring History and Historicizing Desire.” The chiasmus focuses our attention on the crossing of two terms, each with noun and verb forms their grammatical flexibility indexed, perhaps, to the methodological flexibility of the fields in which most of us work: early modern (here both Renaissance and late-medieval) queer and/or sexuality studies. Talk a bit about the definitions of desir/e/ing and histor/y/icizing, and the relation of these terms to the periodization and thematization of your and our work. Is defining these words more …

A Model Of Blood Pressure, Heart Rate, And Vaso-Vagal Responses Produced By Vestibulo-Sympathetic Activation, Theodore Raphan, Bernard Cohen, Yongqing Xiang, Sergei B. Yakushin

Publications and Research

Blood Pressure (BP), comprised of recurrent systoles and diastoles, is controlled by central mechanisms to maintain blood flow. Periodic behavior of BP was modeled to study how peak amplitudes and frequencies of the systoles are modulated by vestibular activation. The model was implemented as a relaxation oscillator, driven by a central signal related to Desired BP. Relaxation oscillations were maintained by a second order system comprising two integrators and a threshold element in the feedback loop. The output signal related to BP was generated as a nonlinear function of the derivative of the first state variable, which is a summation …

Reducing The Role Of The Food, Tobacco, And Alcohol Industries In Noncommunicable Disease Risk In South Africa, Peter Delobelle, David Sanders, Thandi Puoane, Nicholas Freudenberg

Publications and Research

Noncommunicable diseases (NCDs) impose a growing burden on the health, economy, and development of South Africa. According to the World Health Organization, four risk factors, tobacco use, alcohol consumption, unhealthy diets, and physical inactivity, account for a significant proportion of major NCDs. We analyze the role of tobacco, alcohol, and food corporations in promoting NCD risk and unhealthy lifestyles in South Africa and in exacerbating inequities in NCD distribution among populations. Through their business practices such as product design, marketing, retail distribution, and pricing and their business practices such as lobbying, public relations, philanthropy, and sponsored research, national and transnational …

A Review Of Advances In The Identification And Characterization Of Groundwater Dependent Ecosystems Using Geospatial Technologies, Isabel C. Pérez Hoyos, Nir Y. Krakauer, Reza Khanbilvardi, Roy A. Armstrong

Publications and Research

Groundwater Dependent Ecosystem (GDE) protection is increasingly being recognized as essential for the sustainable management and allocation of water resources. GDE services are crucial for human well-being and for a variety of flora and fauna. However, the conservation of GDEs is only possible if knowledge about their location and extent is available. Several studies have focused on the identification of GDEs at specific locations using ground-based measurements. However, recent progress in remote sensing technologies and their integration with Geographic Information Systems (GIS) has provided alternative ways to map GDEs at a much larger spatial extent. This paper presents a review …

Review Paper: The Shape Of Phylogenetic Treespace, Katherine St. John

Publications and Research

Trees are a canonical structure for representing evolutionary histories. Many popular criteria used to infer optimal trees are computationally hard, and the number of possible tree shapes grows super-exponentially in the number of taxa. The underlying structure of the spaces of trees yields rich insights that can improve the search for optimal trees, both in accuracy and in running time, and the analysis and visualization of results. We review the past work on analyzing and comparing trees by their shape as well as recent work that incorporates trees with weighted branch lengths.

Soft Robotic Grippers For Biological Sampling On Deep Reefs, Kevin C. Galloway, Kaitlyn P. Becker, Brennan Phillips, Jordan Kirby, Stephen Licht, Dan Tchernov, Robert J. Wood, David F. Gruber

Publications and Research

This article presents the development of an underwater gripper that utilizes soft robotics technology to delicately manipulate and sample fragile species on the deep reef. Existing solutions for deep sea robotic manipulation have historically been driven by the oil industry, resulting in destructive interactions with undersea life. Soft material robotics relies on compliant materials that are inherently impedance matched to natural environments and to soft or fragile organisms. We demonstrate design principles for soft robot end effectors, bench-top characterization of their grasping performance, and conclude by describing in situ testing at mesophotic depths. The result is the first use of …

Controlled Microfluidics To Examine Growth-Factor Induced Migration Of Neural Progenitors In The Drosophila Visual System, Cade Beck, Tanya Singh, Angela Farooqi, Tadmiri Venkatesh, Maribel Vazquez

Publications and Research

BACKGROUND:

The developing visual system in Drosophila melanogaster provides an excellent model with which to examine the effects of changing microenvironments on neural cell migration via microfluidics, because the combined experimental system enables direct genetic manipulation, in vivo observation, and in vitro imaging of cells, post-embryo. Exogenous signaling from ligands such as fibroblast growth factor (FGF) is well-known to control glia differentiation, cell migration, and axonal wrapping central to vision.

NEW METHOD:

The current study employs a microfluidic device to examine how controlled concentration gradient fields of FGF are able to regulate the migration of vision-critical glia cells with and …