Digital Commons Network^™

Neonatal Brain Metabolite Concentrations: Associations With Age, Sex, And Developmental Outcomes, Emily C. Merz, Catherine Monk, Ravi Bansal, Siddhant Sawardekar, Seonjoo Lee, Tianshu Feng, Marisa Spann, Laraine Mcdonough, Elizabeth Werner, Bradley S. Peterson

Publications and Research

Age and sex differences in brain metabolite concentrations in early life are not well under- stood. We examined the associations of age and sex with brain metabolite levels in healthy neonates, and investigated the associations between neonatal brain metabolite concentrations and developmental outcomes. Forty-one infants (36–42 gestational weeks at birth; 39% female) of predominantly Hispanic/Latina mothers (mean 18 years of age) underwent MRI scanning approximately two weeks after birth. Multiplanar chemical shift imaging was used to obtain voxel-wise maps of N-acetylaspartate (NAA), creatine, and choline concentrations across the brain. The Bayley Scales of Infant and Toddler Development, a measure of …

Enzymatic Analysis Of Yeast Cell Wall-Resident Gapdh And Its Secretion, Michael J. Cohen, Brianne Philippe, Peter N. Lipke

Publications and Research

In yeast, many proteins are found in both the cytoplasmic and extracellu- lar compartments, and consequently it can be difficult to distinguish nonconventional secretion from cellular leakage. Therefore, we monitored the extracellular glyceralde- hyde-3-phosphate dehydrogenase (GAPDH) activity of intact cells as a specific marker for nonconventional secretion. Extracellular GAPDH activity was proportional to the number of cells assayed, increased with incubation time, and was dependent on added substrates. Preincubation of intact cells with 100mM dithiothreitol increased the reac- tion rate, consistent with increased access of the enzyme after reduction of cell wall di- sulfide cross-links. Such treatment did not increase …

Applying The Food-Energy-Water Nexus Approach To Urban Agriculture: From Few To Fewp (Food-Energy- Water-People), Silvio Caputo, Victoria Schoen, Kathrin Spect, Baptiste Grard, Chris Blythe, Nevin Cohen, Runrid Fox-Kämper, Jason Hawes, Joshua Newell, Lidia Poniży

Publications and Research

Many studies examine the correlation between the use of resources such as water, energy and land, and the production of food. These nexus studies focus predominantly on large scale systems, often considering the social dimensions only in terms of access to resources and participation in the decision- making process, rather than individual attitudes and behaviours with respect to resource use. Such a concept of the nexus is relevant to urban agriculture (UA), but it requires customisation to the particular characteristics of growing food in cities, which is practiced mainly at a small scale and produces not only food but also …

Africans Who Arrive In The United States Before 20 Years Of Age Maintain Both Cardiometabolic Health And Cultural Identity: Insight From The Africans In America Study, Elyssa M. Shoup, Thomas Hormenu, Nana H. Osei-Tutu, M.C. Sage Ishimwe, Arielle C. Patterson, Christopher W. Dubose, Annemarie Wentzel, Margrethe F. Horlyck-Romanovsky, Anne E. Sumner

Publications and Research

The overall consensus is that foreign-born adults who come to America age < 20 y achieve economic success but develop adverse behaviors (smoking and drinking) that lead to worse cardiometabolic health than immigrants who arrive age ≥ 20 y. Whether age of immigration affects the health of African-born Blacks living in America is unknown. Our goals were to examine cultural identity, behavior, and socioeconomic factors and determine if differences exist in the cardiometabolic health of Africans who immigrated to America before and after age 20 y. Of the 482 enrollees (age: 38 ± 1 (mean ± SE), range: 20–65 y) in the Africans in America cohort, 23% (111/482) arrived age < 20 y, and 77% (371/482) arrived age ≥ 20 y. Independent of francophone status or African region of origin, Africans who immigrated age < 20 y had similar or better cardiometabolic health than Africans who immigrated age ≥ 20 y. The majority of Africans who immigrated age < 20 y identified as African, had African-born spouses, exercised, did not adopt adverse health behaviors, and actualized early life migration advantages, such as an American university education. Due to maintenance of cultural identity and actualization of opportunities in America, cardiometabolic health may be protected in Africans who immigrate before age 20. In short, immigrant health research must be cognizant of the diversity within the foreign-born community and age of immigration.

Outlier Concepts Auditing Methodology For A Large Family Of Biomedical Ontologies, Ling Zheng, Hua Min, Yan Chen, Vipina Keloth, James Geller, Yehoshua Perl, George Hripcsak

Publications and Research

Background: Summarization networks are compact summaries of ontologies. The “Big Picture” view offered by summarization networks enables to identify sets of concepts that are more likely to have errors than control concepts. For ontologies that have outgoing lateral relationships, we have developed the "partial-area taxonomy" summarization network. Prior research has identified one kind of outlier concepts, concepts of small partials-areas within partial-area taxonomies. Previously we have shown that the small partial-area technique works successfully for four ontologies (or their hierarchies).

Methods: To improve the Quality Assurance (QA) scalability, a family-based QA framework, where one QA technique is potentially applicable to …

Missing Lateral Relationships In Top‑Level Concepts Of An Ontology, Ling Zheng, Yan Chen, Hua Min, P. Lloyd Hildebrand, Hao Liu, Michael Halper, James Geller, Sherri De Coronado, Yehoshua Perl

Publications and Research

Background: Ontologies house various kinds of domain knowledge in formal structures, primarily in the form of concepts and the associative relationships between them. Ontologies have become integral components of many health information processing environments. Hence, quality assurance of the conceptual content of any ontology is critical. Relationships are foundational to the definition of concepts. Missing relationship errors (i.e., unintended omissions of important definitional relationships) can have a deleterious effect on the quality of an ontology. An abstraction network is a structure that overlays an ontology and provides an alternate, summarization view of its contents. One kind of abstraction network is …

Extending Import Detection Algorithms For Concept Import From Two To Three Biomedical Terminologies, Vipina K. Keloth, James Geller, Yan Chen, Julia Xu

Publications and Research

Background: While enrichment of terminologies can be achieved in different ways, filling gaps in the IS-A hierarchy backbone of a terminology appears especially promising. To avoid difficult manual inspection, we started a research program in 2014, investigating terminology densities, where the comparison of terminologies leads to the algorithmic discovery of potentially missing concepts in a target terminology. While candidate concepts have to be approved for import by an expert, the human effort is greatly reduced by algorithmic generation of candidates. In previous studies, a single source terminology was used with one target terminology.

Methods: In this paper, we are extending …

Feasibility Of Continuous Fever Monitoring Using Wearable Devices, Benjamin L. Smarr, Kirstin Aschbacher, Sarah M. Fisher, Anoushka Chowdhary, Stephan Dilchert, Karena Puldon, Adam Rao, Frederick M. Hecht, Ashley E. Mason

Publications and Research

Elevated core temperature constitutes an important biomarker for COVID-19 infection; however, no standards currently exist to monitor fever using wearable peripheral temperature sensors. Evidence that sensors could be used to develop fever monitoring capabilities would enable large-scale health-monitoring research and provide high-temporal resolution data on fever responses across heterogeneous populations. We launched the TemPredict study in March of 2020 to capture continuous physiological data, including peripheral temperature, from a commercially available wearable device during the novel coronavirus pandemic. We coupled these data with symptom reports and COVID-19 diagnosis data. Here we report findings from the first 50 subjects who reported …

Review Of Memory Lab Network Resources, Annie E. Tummino, Tomasz Gubernat, Jeanie Pai

Publications and Research

Review of Memory Lab Network resources for American Archivist Reviews, a portal which highlights websites, digital collections, and technologies that have an impact on the archives profession. The authors review the resources published by the Memory Lab Network and discuss their own work building a Memory Lab at the Benjamin S. Rosenthal Library of Queens College, CUNY.

In Pursuit Of Diversity In The Cuny Library Profession: An Effective Approach To Leadership In Academic Libraries, Nilda Alexandra Sanchez-Rodriguez

Publications and Research

Maximizing the current organizational culture and diversity/inclusion practices within CUNY libraries is crucial to retaining highly talented support staff with significant potential for future leadership roles. This research explores equity, diversity, and inclusion within the library profession, with the intention of implementing strategic frameworks to attract, recruit, and retain underrepresented groups within the University. To spotlight areas of upward mobility within CUNY academic libraries, a CUNY-wide Library Workplace Climate survey on the perceptions of diversity, universal inclusion, and career progression was conducted. The scope of the survey study compares the different perspectives of CUNY librarians, full-time library classified paraprofessionals, and …

Trypanosoma Cruzi Modulates Piwi-Interacting Rna Expression In Primary Human Cardiac Myocytes During The Early Phase Of Infection, Kayla J. Rayford, Ayorinde Cooley, Ashutosh Arun, Girish Rachakonda, Yulia Kleschenko, Fernando Villalta, Siddharth Pratap, Maria F. Lima, Pius N. Nde

Publications and Research

Trypanosoma cruzi dysregulates the gene expression profile of primary human cardiomyocytes (PHCM) during the early phase of infection through a mechanism which remains to be elucidated. The role that small non-coding RNAs (sncRNA) including PIWI-interacting RNA (piRNA) play in regulating gene expression during the early phase of infection is unknown. To understand how T. cruzi dysregulate gene expression in the heart, we challenged PHCM with T. cruzi trypomastigotes and analyzed sncRNA, especially piRNA, by RNA-sequencing. The parasite induced significant differential expression of host piRNAs, which can target and regulate the genes which are important during the early infection phase. An …

Pressure-Induced Formation And Mechanical Properties Of 2d Diamond Boron Nitride, Filippo Cellini, Francesco Lavini, Elton Chen, Angelo Bongiorno, Filip Popovic, Ryan L. Hartman, Remi Dingreville, Elisa Riedo

Publications and Research

Understanding phase transformations in 2D materials can unlock unprecedented developments in nanotechnology, since their unique properties can be dramatically modified by external fields that control the phase change. Here, experiments and simulations are used to investigate the mechanical properties of a 2D diamond boron nitride (BN) phase induced by applying local pressure on atomically thin h-BN on a SiO2 substrate, at room temperature, and without chemical functionalization. Molecular dynamics (MD) simulations show a metastable local rearrangement of the h-BN atoms into diamond crystal clusters when increasing the indentation pressure. Raman spectroscopy experiments confirm the presence of a pressure-induced cubic BN …

Oer / Open Pedagogy Virtual Showcase Presentation, Remi Alapo

Publications and Research

No abstract provided.

El Papel De La Dialogicidad En Los Trabajos De Investigación De Posgrado, David Sánchez-Jiménez

Publications and Research

El presente trabajo advierte de la importancia que adquieren los recursos metadiscursivos en el inter- cambio dialógico que se establece entre el escritor y el lector en los textos académicos redactados en la universidad. Esta interacción es un aspecto de la comunicación académica que los autores necesitan articular de manera efectiva con el fin de establecer relaciones apropiadas con el lector y predisponerlo así para aceptar los argumentos propuestos en sus escritos. Por este motivo, en esta presentación se insiste en la necesidad de elaborar una didáctica que incorpore dichos elementos al contexto universitario, cuyo objetivo final sera el de …

Pandemic Vibrio Cholerae Shuts Down Site-Specific Recombination To Retain An Interbacterial Defence Mechanism, Francis J. Santoriello, Lina Michel, Daniel Unterweger, Stefan Pukatzki

Publications and Research

Vibrio cholerae is an aquatic microbe that can be divided into three subtypes: harmless environmental strains, localised pathogenic strains, and pandemic strains causing global cholera outbreaks. Each type has a contact-dependent type VI secretion system (T6SS) that kills neighbouring competitors by translocating unique toxic effector proteins. Pandemic isolates possess identical effectors, indicating that T6SS effectors may affect pandemicity. Here, we show that one of the T6SS gene clusters (Aux3) exists in two states: a mobile, prophage-like element in a small subset of environmental strains, and a truncated Aux3 unique to and conserved in pandemic isolates. Environmental Aux3 can be readily …

An Enticing Study Of Prime Numbers Of The Shape �� = ��^2 + ��^2, Xiaona Zhou

Publications and Research

We will study and prove important results on primes of the shape ��² + ��² using number theoretic techniques. Our analysis involves maps, actions over sets, fixed points and involutions. This presentation is readily accessible to an advanced undergraduate student and lay the groundwork for future studies.

“How Can We Do Better?”: Empowering Diverse Voices Through An Academic/Public Library Partnership, Annie E. Tummino, Jo-Ann Wong

Publications and Research

Queens Memory is a local community archiving and oral history project, co-administered by Queens Public Library and Queens College, CUNY. During COVID-19, members from both institutions collaborated to create a series of virtual roundtables hosted on Facebook Live, centered on social justice, current events, and creating positive social change. Specific examples include xenophobia and Asian Americans during COVID-19; the Black Lives Matter movement; student activism and political engagement; and equity/inclusion in archives. In selecting these topics and speakers, we made sure that the diversity and lived experiences of our communities were represented, and that speakers included both scholars and students. …

Driven Dipolariton Transistors In Y-Shaped Channels, Patrick Serafin, Tim Byrnes, German Kolmakov V

Publications and Research

Exciton-dipolaritons are investigated as a platform for realizing working elements of a polaritronic transistor. Exciton-dipolaritons are three-way superposition of cavity photons, direct and indirect excitons in a bilayer semiconducting system embedded in an optical microcavity. Using the forced diffusion equation for dipolaritons, we study the room-temperature dynamics of dipolaritons in a transition-metal dichalcogenide (TMD) heterogeneous bilayer. Specifically, we considered a MoSe₂-WS₂ heterostructure, where a Y-shaped channel guiding the dipolariton propagation is produced. We demonstrate that polaritronic signals can be redistributed in the channels by applying a driving voltage in an optimal direction. Our findings open a route …

The Evil God Challenge: Two Significant Asymmetries, Carlo Alvaro

Publications and Research

Several authors have maintained that every argument in support of God, indeed everything that a theist claims about God, can be reversed and used in support of an evil god. The most salient example is the alleged symmetry between theodicies and reverse theodicies: God gave us free will to promote good, evil god gave us free will to promote evil; God allows evil for soul making, evil god allows good for soul destruction; our suffering is compensated for by the eternal bliss in the afterlife, our happiness is compensated for by the eternal damnation in the afterlife. Considering such symmetries, …

Data Analysis And Visualizations Of Drosophila Behavioral Phases, Xiaona Zhou

Publications and Research

We analyze drosophila behavioral data from the neuroscience labs of Professor Maria de la Paz Fernandez, Barnard College of Columbia University, and Professor Orie Shafer, the Neuroscience Initiative of the CUNY Advanced Science Research Center. The main goal of this project is to create algorithms for analyzing and visualizing the average activity of drosophila across a specified number of days and across all live flies and use this analysis to calibrate a smoothing filter to be applied to the raw fly activity so that the drosophila behavioral phases can be computed and visualized. We also investigate how to compute and …

Using Statistical Analysis To Examine Weather Variability In New York City, Ryan Chen, Yuhuang Wang, Jiehao Huang

Publications and Research

As the overall temperature of Earth continues to warm, atmospheric hazards (e.g. heatwaves, cyclones) may be driving increases in climatological trends. This study examines the daily precipitation and temperature record of the greater New York City region during the 1979-2014 period. Daily station observations from three greater New York City airports: John F. Kennedy (JFK), LaGuardia (LGA) and Newark (EWR), are used in this study. Climatological & statistical analyses are performed for the weather variability of New York City metro area to understand the impacts of climate change.The temperature climatology reveals a distinct seasonal cycle, while the precipitation climatology exhibits …

Care And Maintenance Of Dental Restorations, Ibeth Erazo

Publications and Research

Contributing to the longevity of the restoration by minimizing the effects of surface corrosion, maintaining the esthetic appearance and the smooth surface characterization, and contributing to gingival health by lessening the potential for plaque retention are the principal reasons for taking care of dental restorations. However, during oral hygiene routine procedures and prevention treatments, these desired effects are not always achieved. In many cases, the restorative materials are not identified in a patient’s record leading to damage during oral hygiene performance by dental professionals. Therefore, it is important to be able to recognize the different restorative materials and employ the …

Responsive Web Design, Ashley Varon, David Karlins

Publications and Research

Responsive web design is one of the most important topics in web. It can be one of the main reasons a website can be costing a business clients, and creating an effect on a business. The rise in popularity of mobile phones and tablets makes it crucial for a website to be designed to respond and adjust to different viewports. This project will research how important responsive web design is in 2020 and the positive or negative impacts it may have on the users, customers, and businesses. Companies must consider text size, layout, navigation, image sizes, and testing when designing …

Developing Ionic Nanomaterials For Biomedical Applications: Surface Chemistry And Morphologic Imaging, Lin Mousa, Hayley Sanchez, Subhendra Sarkar, Zoya Vinokur

Publications and Research

Microscopic properties of various radiologic contrast materials are studied for weak to strong surface interactions in model fruits. These interactions are imaged under various ionic environments as present in multiple, common fruit systems. Low and high X-ray energies may show different imaging noise reflective of scattered radiation from iron, manganese, and other metal ions in fruits. This will be compared with MRI image noise on similar systems obtainable from collaborating MRI research students (see Bleidis Buitrago et al, in this poster session).

Open Educational Resources: What Do Students Want?, Aneeza Hussain, Joyette K. Noel

Publications and Research

This project aims at identifying the needs and requests of students for Open Educational Resources (OERs) in order to develop rubrics for design, evaluation but also revisions of OERs. For this purpose literature searches on the matter were conducted to determine if information on students’ perspective on OER content and expectations existed. Simultaneously, feedback from fellow City Tech students with experience using OERs has been collected. Our results provide insight on how City Tech students perceive OERs, in comparison with traditional resources. This also pinpoints the key pedagogical features that OERs should offer in order to attract, engage and better …

Benefits Of Pre-Construction Analysis: Cet Senior Capstone Expands Understanding Of An Urban Refuge At Gallopnyc Sunrise Stables, Aalaa Mohammed

Publications and Research

For any construction project, there exists a phase of planning known as “pre-construction.” This initial phase of the project provides a definition of the project, identification of potential issues, planning and scheduling, scope, cost estimation, and analysis of needs for the job. My research analyzes a pre-construction case study conducted for Gallop NYC’s Stable in Howard Beach, Queens. The findings suggest that the practice of construction planning is effective in order to avoid delays in construction itself and ensure successful project completion. Supporting literature examines some of the best practices for pre-construction analysis. These include but are not limited to: …

Measuring Influence On Twitter, Daniela B. Martinez

Publications and Research

A survey took in MAT 1372 about students' opinions on Twitter showed that most of them assumed that if a Twitter account has more followers, it will receive more likes or replies. However, accounts can buy followers, and followers do not necessarily mean engagement. In this paper, we used Twitter because it is a significant player in social media, but we can measure influence without using Twitter's follower count. We took a reference from Meeyoung Cha's article "The Million Follower Fallacy," which has demonstrated that the Twitter follower count is a meaningless metric in determining influence. To measure influence, a …

Implementation Of Pseudo-Random Number Generator Using Lfsr, Touheda Khanom, Fahmeda Khanom

Publications and Research

Linear Feedback Shift Registers (LFSR) play a vital role to provide cybersecurity for the data communication system. LFSR is a shift register where the input is linear of its previous states. The most important application of LFSR is the device’s ability to generate a pseudo-random sequence of values that are used in encryption and decryption to secure personal data. Moreover, LFSR is used in Cyclic Redundancy Check Calculations (CRC) which can help to detect errors and corruption in data communications as LFSR feedback values can be modified. The main objective of the research is to generate the pseudo-random sequence of …

Principal Component Analysis For Predicting The Party Of The Legislators, Afsana Mimi

Publications and Research

In Spring 2020, I did a project, "Decision Tree Predicting the Party of Legislators," and construct a decision tree model to predict legislators' parties' based on their votes. We also use this model to identify legislators who frequently voted against their parties. We used the legislators' roll call votes, Office of Clerk U.S. House of Representatives Data Sets (Categorical values) collected in 2018 and 2019. In this new project, We study the 2018 and 2019 vote data using Principal Component Analysis (PCA). The goal is to find a (compressed) model using unsupervised learning to distinguish the legislators' parties, and PCA …

Understanding Of Aerosol Transmission Of Covid 19 In Indoor Environments, Adama Barro, Cathal O'Toole, Jacob S. Lopez, Matthew Quinones, Sherene Moore

Publications and Research

Our reason for discussing severe acute respiratory syndrome corona virus 2 (SARS-CoV-2) or 2019 novel corona virus (Covid-19), is to understand its aerosol transmission characteristics in indoor spaces and to mitigate further spread of this disease by designing a new HVAC system. The problem that we are tackling is the spread of covid-19 droplets through aerosol transmission by looking at potential engineering solutions to the existing HVAC systems. The purpose is to eradicate the spread of the COVID-19 by testing indoor spaces in an effort to understand the effectiveness of ventilation controls. We believe that scientists and engineers have not …