Digital Commons Network^™

Effects Of Mature Recombinant Gdf9 And Bmp15 On In-Vitro Maturation Of Bovine Oocytes And Subsequent Embryo Development And Effects Of Antioxidants On Blastocyst Re-Expansion Rates, Jamie Thompson

Master's Theses

In-vitro produced embryos (IVP) differ greatly from in-vivo derived embryos (IVD) in gene expression, metabolism, development, and cryotolerance which limit the widespread use of this technology. In-vitro maturation (IVM) is one of the most important components for successful in-vitro embryo development. Growth differentiation factor 9 (GDF9) and bone morphogenetic protein 15 (BMP15) have been found to be essential during oocyte maturation and thus female fertility. These proteins are oocyte secreted factors (OSFs) and are produced with pro- and mature protein regions where the pro-regions are thought to aid in protein folding and dimerization where heterodimerization the two proteins has been …

Neural Compression Inference Accelerator: A Cost And Energy-Effective Alternative To Conventional Machine Learning Inference Methods, Matthew Wallace

Master's Theses

Recent developments in machine learning and artificial intelligence have sparked an influx of workloads that require specialized computer hardware for cloud services. The hardware running machine learning models predominantly consists of graphics processing units (GPUs) and tensor processing units (TPUs). However, these com- ponents are expensive for cloud services to purchase, costly for customers to rent, prone to price spikes, and energy-intensive. In this research we show that both cloud services and customers would benefit from utilizing field programmable gate arrays (FPGAs) to alleviate the aforementioned challenges. An FPGA can be configured as a machine learning accelerator, operating similarly to …

The Effect Of Adding Mango To A Breakfast Meal On Glycemic And Satiety Responses And Next Meal Energy Consumption, Natalie R. Ramos

Master's Theses

Spikes in blood glucose (BG) result in adverse health consequences in people with and without diabetes. This study aimed to compare the BG and satiety responses of adding mango or sugar to a high glycemic load (HGL) breakfast. A randomized, controlled trial (cross-over design) was conducted with 18 participants. Participants consumed cornflakes and almond milk (Control), control plus 34gm added sugar (ASug), or added mango (AMango) with 34gm carbohydrate. BG was determined at fasting, 15, 30, 60, 90, 120min postprandial; satiety was rated with a visual analog scale at each time point. At 120min, subjects consumed a snack of hummus …

Class F Power Amplifier And Doherty Power Amplifier Design, Shreyansh Suman

Master's Theses

The main goal of this thesis is to design and fabricate a power amplifier suitable for entry in IMS 2023 High Efficiency Power Amplifier Student Design Competition. Power amplifier design requires multiple design tradeoffs, for example, efficiency and linearity are the two main conflicting design parameters that require careful tradeoff to ensure optimum performance. Two prototypes are designed and fabricated for the competition: Class F operating at 1.5 GHz and Doherty Power Amplifier designed for an operating frequency of 3 GHz. Both prototypes meet the minimum requirement for qualifying in the IMS 2023 HEPA SDC. Class F power amplifier designed …

Distributed Control Of Servicing Satellite Fleet Using Horizon Simulation Framework, Scott Plantenga

Master's Theses

On-orbit satellite servicing is critical to maximizing space utilization and sustainability and is of growing interest for commercial, civil, and defense applications. Reliance on astronauts or anchored robotic arms for the servicing of next-generation large, complex space structures operating beyond Low Earth Orbit is impractical. Substantial literature has investigated the mission design and analysis of robotic servicing missions that utilize a single servicing satellite to approach and service a single target satellite. This motivates the present research to investigate a fleet of servicing satellites performing several operations for a large, central space structure.

This research leverages a distributed control approach, …

Beyond The Clinic: Modified Internet-Delivered Parent-Child Interaction Therapy, Terreca Cato

Master's Theses

Children who attend Head Start children are at increased risk for emotional and behavioral disorders. A variety of systemic factors contribute to their increased risk for problematic developmental outcomes. Parent-Child Interaction Therapy (PCIT) is an evidence-based intervention for improving positive parenting skills and children’s outcomes. This study included a multiple baseline design across participants and tested the effects of Internet-Delivered Parent-Child Interaction Therapy (I-PCIT) on improving Head Start mothers’ use of the Effective Commands that are part of the Parent Directed Interaction component of PCIT. Seven total mothers were recruited to participate in this study. Four mothers did not complete …

Estimation Of Quantitative Genetic Parameters Of The Eastern Oyster (Crassostrea Virginica) In The Gulf Of Mexico, Heather King

Master's Theses

The decline of natural oyster reefs in Gulf of Mexico (Gulf) states has stimulated the development of aquaculture to support the industry and restoration programs. Gulf habitats feature diverse salinity environments that may require oysters bred for habitat-specific optimal genetic characteristics. In this work, genetic parameters for performance in habitats with different salinity were estimated. In September 2020, 102 males and 102 females sourced from 17 natural reefs across the northern Gulf were bred according to 2 males x 2 females non-overlapping factorial crossing designs, resulting in 204 full and half sibs. All families were pooled after fertilization according to …

Predictive Ability Of A 3d Body Scanning Mobile Application For Metabolic Health Risk, Caleb Brandner

Master's Theses

There is an increasing prevalence of obesity within the US and rising rates of metabolic syndrome among those aged 20-39 concurrent with a decrease in the reception of primary care. Limitations to healthcare including access, cost, and availability, highlighting the need for simple, efficient, and accessible cardiometabolic health risk screening. Given the surge in smartphone ownership over the last decade, this study sought to determine the predictive ability of a mobile 3D-optical (3DO) body composition assessment application in determining metabolic health risk. A total of 62 participants (female: 36) underwent traditional anthropometric measurements, 3DO body scanning using a smartphone application, …

Refactoring Dependency Loading And Standardizing Factory Patterns In The Horizon Simulation Framework, Jack W. Kelly

Master's Theses

The Horizon Simulation Framework (HSF) is an open-source community driven mod- eling and simulation tool developed over 15 years by a lineage of Cal Poly graduate students. The tool excels in its flexibility to model an assortment of complex systems, with prebuilt modeling elements available for the simulation of space missions. A high-level simulation tool like HSF lends itself to an agile development cycle as system constraints can be quickly identified through day in the life simulation of the modeled system. The objective of the work presented in this thesis is to refactor the way in which several modeling elements …

Range-Doppler Map Processing Chain For Marine Radar On Fpga Of An Rfsoc, Nickolas W. Ogilvie

Master's Theses

To improve the accuracy and resolution of the measurements, radar systems employ increasingly complex, resource-intensive signal processing, larger bandwidths, and higher carrier frequencies. However, implementing these improvements requires more expensive, complex electronics that are larger and use more power. Using RFSoC (Radio Frequency System on Chips) in radars can address these challenges. By combining processors, an FPGA (Field Programmable Gate Array), and RF data converters into a single integrated circuit, RFSoCs allow for radar electronics that are physically smaller, use less power, and are simpler to design. As using RFSoCs to perform RF data conversion for radars has been already …

Implementation Of Log4net And Parametric Modeling Within The Horizon Simulation Framework, Evan Andrew Droz

Master's Theses

Creating system models and simulations allow for rapid, iterative analysis of spacecraft mission performance. This design methodology provides opportunities for improvement before allocating resources towards further physical spacecraft development. Horizon Simulation Framework (HSF) is a system evaluation tool that can be used for the assessment of spacecraft mission performance, subject to mission targets, constraints, and spacecraft design. Specific subsystems are defined for a unique mission case and are evaluated through a Day-in-the-Life (DITL) scenario simulation. Valuable information can be derived from failed attempted mission-related events, highlighting shortcomings in subsystem capabilities. Further information can be unveiled by assessing possible system sensitivity …

Design And Implementation Of A Prototype Pendulum Platform For Aerospace Controls Education, Zachary A. Wright

Master's Theses

This thesis presents a modular, low-cost, prototype inverted pendulum platform for undergraduate Aerospace control theory research and education. The platform's default configuration integrates a propeller and reaction wheel as its actuators, with multiple sensors available to measure the pendulum's states. The platform utilizes open-source software and hardware to power the actuators, and uses MATLAB/Simulink to streamline data collection. System identification techniques are applied to the platform, and the mathematical model of the pendulum is verified. Momentum exchange between the reaction wheel and propeller during closed-loop stabilization of the pendulum is demonstrated.

Hydric Physiology Of Lizards, Savannah Weaver

Master's Theses

Chapter 1: Animals can respond to extreme climate by behaviorally avoiding it, or by physiologically coping with it. We understand behavioral thermoregulation and physiological thermal tolerances, but water balance has largely been neglected. Climate change includes both global warming and changes in precipitation regimes, so improving our understanding of organismal water balance is increasingly urgent. We assessed the hydric physiology of endangered Blunt-nosed Leopard Lizards (Gambelia sila) by measuring cutaneous evaporative water loss (CEWL), plasma osmolality, body mass, and body condition throughout their active season. On average, G. sila had low CEWL that is likely desert-adaptive, and high …

Balancing Privacy And Accuracy In Iot Using Domain-Specific Features For Time Series Classification, Pranshul Lakhanpal

Master's Theses

ε-Differential Privacy (DP) has been popularly used for anonymizing data to protect sensitive information and for machine learning (ML) tasks. However, there is a trade-off in balancing privacy and achieving ML accuracy since ε-DP reduces the model’s accuracy for classification tasks. Moreover, not many studies have applied DP to time series from sensors and Internet-of-Things (IoT) devices. In this work, we try to achieve the accuracy of ML models trained with ε-DP data to be as close to the ML models trained with non-anonymized data for two different physiological time series. We propose to transform time series into domain-specific 2D …

Suppression Of National Identities: Ukrainian And Baltic Cultures In The Soviet Union, Jonathan H. Mastman

Master's Theses

This thesis defines the formation and consummation of Soviet Bolshevism as another imperialist force rather than its stated objective of freeing the people of the United Soviet Socialist Republics from the clutches of an inequitable elite. Through the policies and objectives of the Soviet government the workers and citizens of Ukraine and the Baltic republics were not liberated or given autonomy over their lives and labor, as Marxist-Leninism would have them believe. I review the Russification efforts found first in the Tsarist Russian Empire and then continued by Soviets in the nature of pursuing or denying cultural, political, and economic …

Development Of Wiskott-Aldrich Syndrome Knock Out Protocol For Drug Substance Assay Development, Julia C. Hanna

Master's Theses

Wiskott-Aldrich Syndrome (WAS) is a rare X-linked primary immunodeficiency affecting approximately 1 in 100,000 live XY births in North America and is caused by a mutation to the WAS gene which is expressed across hematopoietic lineages. The WAS protein (WASp) plays a role in regulating actin polymerization. On a cellular level, there are a variety of effects of a lack of WASp or expression of a dysfunctional WASp protein for patients including issues with migration, adhesion, chemotactic response, phagocytosis, activation, and proliferation across different cell types in addition to reduced platelet size and output. This can lead to several systematic …

Design Of Class F-Based Doherty Power Amplifier For S-Band Applications, Kyle Chang

Master's Theses

Modern RF and millimeter-wave communication links call for high-efficiency front end systems with high output power and high linearity to meet minimum transmission requirements. Advanced modulation techniques, such as orthogonal frequency-division multiplexing (OFDM) require a large power amplifier (PA) dynamic range due to the high peak-to-average power ratio (PAPR). This thesis provides the analysis, design, and experimental verification of a high-efficiency, high-linearity S-band Doherty power amplifier (DPA) based on the Class F PA. Traditional Class F PAs use harmonically tuned output matching networks to obtain up to 88.4% power-added efficiency (PAE) theoretically, however the amplifier experiences poor linearity performance due …

Contextually Dynamic Quest Generation Using In-Session Player Information In Mmorpg, Shangwei Lin

Master's Theses

Massively multiplayer online role-playing games (MMORPGs) are one of the most

popular genres in video games that combine massively multiplayer online genres with

role-playing gameplay. MMORPGs’ featured social interaction and forms of level pro-

gression through quest completion are the core for gaining players’ attention. Varied

and challenging quests play an essential part in retaining that attention. However,

well-crafted content takes much longer to develop with human efforts than it does to

consume, and the dominant procedural content generation models for quests suffer

from the drawback of being incompatible with dynamic world changes and the feeling

of repetition over time. …

Development Of A Low-Cost Acoustic Gauge For Simultaneous Tide And Wave Measurement, Alexander Kalman Dunn

Master's Theses

High-quality tide and wave data are essential in a variety of fields including coastal engineering, climate science, disaster response, and recreational activities. Accurate data are publicly accessible from government organizations such as the National Oceanic and Atmospheric Administration (NOAA), however the high costs associated with deploying and maintaining their high accuracy gauges results in a deficit of localized data. Commercial gauges available starting at $2,000 are still expensive for local agencies and individual users to deploy and maintain. These commercial options can also be limited in their scope, accuracy, or ease of use. In this thesis, a low-cost acoustic gauge …

Examining The Use Of A Network Bypass To Circumvent Data Diodes Within Industrial Control Systems, Bryce Molesh

Master's Theses

Our modern world relies upon large scale industrial plants, that are manged by Industrial Control Systems (ICS), to provide critical services such as electricity, water, or waste processing. Over time, these systems have been increasingly connecting outdated systems to modern internet technology to provide additional functionality such as real-time monitoring while also enabling operators to conduct modern business analytics. Thus, these plants offer a potential target for attackers. Recently, such attacks on Industrial Control Systems have increased in number with well publicized attacks such as Stuxnet and TRISIS. To protect against such attacks while also modernizing their networks, Industrial Control …

Groups Of Non Positive Curvature And The Word Problem, Zoe Nepsa

Master's Theses

Given a group $\Gamma$ with presentation $\relgroup{\scr{\scr{A}}}{\scr{R}}$, a natural question, known as the word problem, is how does one decide whether or not two words in the free group, $F(\scr{\scr{A}})$, represent the same element in $\Gamma$. In this thesis, we study certain aspects of geometric group theory, especially ideas published by Gromov in the late 1980's. We show there exists a quasi-isometry between the group equipped with the word metric, and the space it acts on. Then, we develop the notion of a CAT(0) space and study groups which act properly and cocompactly by isometries on these spaces, such groups …

​ Soilborne Pathogens Of Strawberry In The Central Coast Region Of California: ​ Survey And Cover Cropping With Wheat For Management Of Macrophomina Phaseolina, Mary Steele

Master's Theses

Surveys of the four major soilborne pathogens of strawberry (Fusarium oxysporum f. sp. fragariae, Macrophomina phaseolina, Phytophthora spp., and Verticillium dahliae) to determine their relative prevalence were conducted in Watsonville-Salinas, CA in 2021 and in Santa Maria, CA in 2022. All four major pathogens were detected at relatively similar prevalence in Watsonville-Salinas, between 22% and 31% of sampled fields. In Santa Maria, M. phaseolina was far more prevalent at 52% of sampled fields, the other three falling between 14% and 17%. Additionally replicated greenhouse and field trials were conducted to evaluate the effects of wheat as …

Assessing The Resilience Of Mycorrhizal Networks Following Central Tree Removal, Deon Lillo

Master's Theses

Mycorrhizal networks (MNs), or the networks of fungal mycelia that connect plants to each other, are vital in contributing to the well-being of ecosystems. They not only assist in the transport of nutrients across an ecosystem, but also help protect an ecosystem from disease and adverse conditions. However, more research into these networks is needed and modelling these networks as graphs can help us achieve this. By applying centrality analysis and performing k-core partitioning on these networks, we are able to identify the trees that are most important and central to a MN and observe the effects of removing these …

Reconstructing Identity: Carlton Burgan, Patient Zero In The Development Of Plastic Surgery, Civil War Through World War I, Teresa M. George

Master's Theses

Plastic surgery has played an integral role in helping people achieve societal expectations of appropriate physical appearance since its inception. Through the story of Carlton Burgan, a Union soldier during the American Civil War, who suffered severe facial trauma by mercury poisoning, this thesis hopes to reconstruct the conversation around plastic surgery’s origins as it is influenced by societal standards of the day. Specifically, this thesis argues that the seminal moments leading to plastic surgery being seen as a worthwhile medical specialty was during the Civil War, not World War I as so many scholars have put forth. Violent acts …

Marine Protected Areas And Oceanographic Variability: Impacts On Blue Rockfish (Sebastes Mystinus) And The Human Dimensions Of Collaborative Fisheries Research, Erin M. Johnston

Master's Theses

Fishing pressure and environmental variability are two of the most impactful drivers of fish populations worldwide. It is critical to effective management to understand the intersection between the two and how each may affect fish population dynamics, especially for exploited nearshore species like rockfishes (Sebastes spp.). This is especially true as models indicate that global climate change will dramatically increase the frequency and severity of large-scale oceanographic perturbations. We were interested in whether we could detect changes in relative abundance of nearshore rockfishes relative to large-scale oceanographic events using a broad-scale index like the Multivariate Ocean Climate Indicator …

Gdpr, Privacy And Europe's Power Gambit, Daniel Maneloveg

Master's Theses

This paper examines the current state of data privacy laws, with a specific focus on the European Union's General Data Protection Regulation. It begins by defining privacy as a fundamental aspect of the liberal worldview and discussing the history of privacy legislation to show that protecting privacy has long been a commitment of liberal countries.

The paper then discusses how technology has progressed and exposed the inadequacy of previous privacy laws, citing scholarly literature to emphasize the urgent need for updated legislation. It provides an overview of updates made to privacy legislation before the GDPR was passed in 2018, followed …

The Right People In The Wrong System: Examining The Tension Between Nonprofit Individuals And Organizational Structure, Erin Vong

Master's Theses

Nonprofit organizations pursue missions of social good while still operating within the confines of systems of oppression, creating a tension between organizational values and operational success. Previous research focuses on the micro-level role of individuals and the macro-level role of ideologies that create these tensions for nonprofit workers in these spaces. Through a qualitative case study, this thesis seeks to uncover the meso-level role of organizational structures in the experiences of nonprofit workers. The research questions that guided this case study were (a) How does one organization present equitable working conditions for its staff? (b) How do staff at this …

Positive Out Of The Negative: Tracking Renewable Energy Projects In Central America, Jordan Ethan Castillo (Miner)

Master's Theses

Central America is undertaking a vast Renewable Energy (RE) transition, due to widespread investments across the region in an array of technologies. These technologies include Community Solar, Wind, and Hydroelectricity. Hydroelectricity has long been the backbone of many countries’ energy grids in the region due to the region’s long history with hydroelectricity. Ambitious climate goals coupled with diminishing hydroelectric power generation opportunities have led to an expansion of investment in Community Solar and Wind energy. The embrace of Solar and Wind has been accelerated due to declining costs for these technologies as they mature. Central America as a case study …

War And Genocide In Darfur And Its Impact On Darfur Society, Hamid Elshareif

Master's Theses

The Darfur region in western Sudan has witnessed bloody revolutions and conflicts since the beginning of 2003. The Sudanese government recruited militias such as Janjaweed who killed and robbed the civilian people of Darfur. The Janjaweed practiced murder, rape, torture, the burning of villages, looting, and theft which amounted to what most people consider genocide. This genocide is being practiced against the indigenous African tribes in the western region of Sudan which is less developed and has been marginalized by the government in Khartoum. Reasons for this conflict are in question with many people seeing it as purely an Arab …

'Formation In Distinctive Dimensions Of Our Way Of Proceeding': Preparation Of Lay Directors Of Works In Jesuit Schools, Perry T. Petrich Sj

Master's Theses

The purpose of the study was to determine how lay directors of works in Jesuits West secondary schools can be formed to best serve as faith leaders. The study consisted of secondary research in which interview data and surveys from studies on lay formation in Jesuit universities and lay leadership of Bay Area Catholic High Schools were used to determine whether or not formation of lay directors of works in faith leadership is possible, what the objectives of that training should be, and how that training can be offered. This analysis determined that lay formation is both possible and necessary. …