Digital Commons Network^™

Developing Anisotropic Soft Matter As Functional Materials To Interface With Biological Systems, Homa Ghaiedi

Graduate Theses and Dissertations

Liquid crystals (LCs) constitute a subset of soft matter possessing hybrid characteristics from both liquid and crystalline phases. In this state, the center of masses remains uncorrelated similar to an isotropic phase, while the long axis of molecules aligns in parallel, resulting in molecules exhibiting orientational and positional order, either individually or concurrently. The directional alignment inherent in LCs arises from the asymmetrical shape and structure of the constituent molecules, causing a spontaneous self-assembly into ordered phases. This cooperative molecular behavior manifests distinctive optical features when subjected to cross polarizers. The remarkable sensitivity of LCs to external stimuli, including temperature, …

The Effect Of Gentle Yoga On Average Daily Step Count, Francesca D'Agrosa

Graduate Theses and Dissertations

While walking is a widely accessible form of exercise that is highly effective at increasing overall wellness (Kadir et al., 2019; Zhao et al., 2015) and is a recommended form of physical activity for overweight and obese individuals, studies still indicate low step counts and levels of physical activity in people with obesity (Shultz et al., 2011). Sedentary overweight individuals may avoid walking for several reasons, including physiological and/or biomechanical factors that make walking more difficult. This study attempted to explore and address these avoidant behaviors by employing a single-case ABAB reversal design to implement bi-weekly gentle yoga sessions over …

Guided Pathways: How Early Major Declaration Impacts Student Graduation Rates, Chris Mcbeath

Graduate Theses and Dissertations

Increasing graduation rates continues to be a high priority for administrators at community colleges nationwide. While several factors affect graduation rates, many researchers focus on how a student’s status as declared or undecided may impact their likelihood of graduating. This study aims to examine the potential relationship between matriculating with or without a major declared and degree completion. There exists a perception that an early decision about a major is a critical step in ensuring students graduate. Many institutions require or strongly encourage students to declare a major before enrolling in their first semester. Previous research about undeclared students and …

More Than A Monolith: Three Essays On The Diverse Journey Of Immigrant Students And Their Postsecondary Outcomes, Rian Rinaldi Djita

Graduate Theses and Dissertations

For many years, the United States (U.S.) has been the country with the largest number of immigrants. As a result, policy about immigrant students’ success becomes crucial since it carries not only ethical implications but also economic and societal implications. While there have been other alternatives for students’ success, such as Career and Technical Education (CTE), undeniably, college is still seen as a common pathway to success (e.g., Choi, 2015; Heckman et al., 2018; Turner, 2004). Unfortunately, there are several gaps in the literature on immigrant students’ success and postsecondary outcomes. First, while there is an increasing number of immigrants …

Exploring The Potential Of Electromagnetic-Driven Energy Technologies In Preventing Microbial And Aflatoxin Contamination Of Grains, Abass A. Oduola

Graduate Theses and Dissertations

Electromagnetic-driven energy such as infrared (IR) technology holds great potential in deactivating Aspergillus flavus spores and prevents aflatoxin B1 (AFB1) contamination. Aflatoxins, highly toxic secondary metabolites primarily produced by Aspergillus species within the Flavi section (A. flavus, A. parasiticus, and A. nomius), pose substantial health risks to both humans and animals due to their significant toxicity and carcinogenic properties. Detecting and quantifying the presence and proliferation of these harmful fungi on food materials can be achieved by measuring the concentration of ergosterol. Ergosterol is a sterol compound produced in the cell membranes of fungi during their growth, providing …

Vegetation Management During Establishment Of Native Grasses And Forb Plantings On Roadsides And Prairie Restoration, Rachel Woody-Pumford

Graduate Theses and Dissertations

North American prairies have been shrinking due to agricultural production, overgrazing, development of cities and towns, and climate change. However, integrated roadside vegetation management (IRVM) creates the opportunity to reestablish prairies along roadsides through planting native grasses and forbs. Utilizing postememergence (POST) herbicides registered for use along rights-of-way has the potential to remove invasive species and create space for newly establishing native grass and forb species. The use of clopyralid, florpyrauxifen-benzyl, metsulfuron, and quinclorac were found to be safe for use in plantings containing big bluestem (Andropogon gerardii Vitman) and butterfly milkweed (Asclepias tuberosa L.). However, florpyrauxifen-benzyl injured and stunted …

A Mixed Methods Exploration Of Interoceptive Awareness In Adults Who Stutter, Hazel Malcolm

Graduate Theses and Dissertations

Stuttering is commonly described as a disorder of speech fluency characterized by primary speech behaviors that are judged by external observers to be typical of stuttering, including part-word repetitions, prolongations, and blocks (i.e., silent prolongations or postural fixations). Despite wide use in the field of speech-pathology, definitions focusing on these ‘primary’ behaviors have also been criticized as ‘surface’ or ‘perceptual’ definitions that favor the experience of a listener over that of the speaker. Recent qualitative evidence suggests that, when asked, adults who stutter (AWS) instead define stuttering as an internal feeling or awareness of being ‘stuck’ that is surrounded by …

Characterizing The Role Of Chemo-Mechanical Couplings In The Activation Process Of Proteins That Undergo Conformational Changes, Ugochi Isu

Graduate Theses and Dissertations

Proteins are not static entities; rather, they are dynamic macromolecules that undergo conformational changes to perform their biological functions. These structural transitions are often coupled to chemical events such as lipid interactions, or changes in the cellular environment. Understanding the intricate interplay between chemical perturbations and the resulting mechanical response is crucial for elucidating the activation mechanisms of proteins. This dissertation aims to characterize the role of chemo-mechanical couplings in the activation process of two G protein-coupled receptors (GPCRs): Cannabinoid Receptor 1 (CB1) and Metabotropic Glutamate Receptor 1 (mGluR1). We employ molecular dynamics simulations to investigate the conformational landscapes of …

The Expression Of Recombinant Cas9 Proteins In E. Coli Bl21(De3) Strains, Morgan Reese

Graduate Theses and Dissertations

Abstract Extensively used for genome editing, CRISPR-Cas9 is a relatively new tool that has made a major impact in the genomic engineering landscape. Due to this, the production of CRISPR proteins that are not commercially available can limit research applications. Here, we present methods for optimizing laboratory scale production of CRISPR proteins including Cas9. The method uses IPTG to induce gene expression of the specified Cas9 and nickel column purification to isolate proteins. CRISPR proteins are validated for purity by SDS-PAGE gel, western blot, and for activity by in vitro digestion. We thoroughly validate and compare the effectiveness of BL21(DE3) …

Genome-Wide Association Study/ Genomic Prediction Of Cowpea Seed Protein And Black Seed Coat Color In Cowpea, Yilin Chen

Graduate Theses and Dissertations

Cowpea (Vigna unguiculata [L.] Walp) is a crucial crop in many regions, serving as a vital protein source for humans and livestock. Addressing the need to enhance its nutritional quality and make it easier to cultivate cowpeas of specific colors, this study utilized genome-wide association studies (GWAS) to identify markers associated with protein content and seed coat color patterns in cowpea.

In the protein content study, a GWAS was conducted on 161 cowpea accessions using 110,155 high-quality single-nucleotide polymorphisms (SNPs). Seven significant SNP markers were identified, all located at a locus on chromosome 8 associated with the gene Vigun08g039200, enhancing …

Temporal Trends And Dental Metric Variation In The Macaca Sylvanus Lineage, Cristina Stan

Graduate Theses and Dissertations

The extensive collection of fossil macaques from Europe, spanning from the Late Miocene to the Late Pleistocene period, is believed to be of the species Macaca sylvanus. However, there has been a prolonged discussion regarding the classification of these specimens into a single taxonomic group as the existing dental sample exhibits a large amount of morphological and metric variation. Specifically, researchers have attempted to identify multiple subspecies based on chronological data of the paleontological locality and, secondly, based on dental metric variation. In this study, I assess temporal trends in the fossil record of Macaca sylvanus and compare overall variation …

Turfgrass Soil Surfactants: Examining Active Ingredients, Application Strategies, And The Structure–Function Relationship In Sand-Based Putting Greens, Daniel O'Brien

Graduate Theses and Dissertations

Soil surfactants, commonly referred to as wetting agents, are a leading water management strategy for golf courses. Non-ionic block copolymers are the most common type of turfgrass soil surfactant. However, differences in the registration process and labeling requirements allow soil surfactants to enter the marketplace accompanied by far-less data compared to other products used on golf courses. This has led to considerable confusion among golf course superintendents. Three primary sources of confusion are: (i) the widely-used marketing terminology of “penetrants” and “retainers” to classify wetting agents; (ii) active ingredients which in some cases are not disclosed at all; and (iii) …

Evaluation Of The Effect Of A Commercial Lippia Origanoides Essential Oil Extract On Salmonella Serovar Enteritidis As A Natural Alternative To Antibiotics In The Poultry Industry, Abdiel Atencio

Graduate Theses and Dissertations

The purpose of the present research was to evaluate the bactericidal activity of a microencapsulated Lippia origanoides essential oils (LOEOs) against Salmonella Enteritidis (SE) in an in vitro crop assay and in a prophylactic broiler chicken model using three low doses of the product: 75 ppm, 150 ppm and 300 ppm. Two trials of each assay were conducted. Day-of-hatch male Cobb-Vantress broiler chickens were randomly allotted to one of four groups: 1) positive control group; 2) 75 ppm LOEOs group; 3) 150 ppm LOEOs group; 4) 300 LOEOs group. Chicks were fed and watered ad libitum in heated brooder batteries …

Two Studies: Aromatization-Driven Ring Opening Functionalization Of Unstrained Cycloalkanones Through Visible Light Catalysis, And Synthesis Of Amino Endoperoxides Using Self-Doped Titanium Dioxide (Ti3+@Tio2) As A Photocatalyst, Enoch Kudoahor

Graduate Theses and Dissertations

The pharmaceutical industry has been focused on discovering new innovative drugs over the last decade, but the syntheses are either inefficient or the approach to environmental sustainability raises significant concerns. Photochemistry and photocatalysis have found widespread applications in organic synthesis as a result of this pressing issue. Our role as organic chemists is to improve environmental quality by creating a "greener" world through the development of efficient synthetic methods and strategies. Solar energy is now one of the most abundant and renewable natural resources. The emergence of environmental sustainability concerns has led to the development of new techniques for harnessing …

Development Of Genomic Resources And Group Specific Markers For Evaluation Of Genetic Diversity Of Pathogenic Rhizoctonia Species, Juanita Gil Bedoya

Graduate Theses and Dissertations

Rhizoctonia is a complex genus in the phylum Basidiomycota comprised of several taxa distributed across different families in the order Cantharellales. Many species in the genus have been identified as plant pathogens, saprobes, or beneficial mycorrhizal symbionts of orchids. Rhizoctonia isolates are divided into binucleate and multinucleate and then classified into anastomosis groups (AGs) based on the ability of compatible hyphae to fuse. Binucleate Rhizoctonia species (Ceratobasidium spp.) are classified into 21 AGs identified with letters (AG-A to AG-U). Multinucleate Rhizoctonia species (Thanatephorus spp.) are identified with numbers and classified into 14 anastomosis groups (AG-1 to AG-13, and bridging group …

Assessing The Evaporation Method For Soil-Water Retention Curve Development And Comparison Of Soil-Water Characteristics Across Different Tillage Practices In A Furrow-Irrigated Corn (Zea Mays L.) System, Jeferson Prass Pimentel

Graduate Theses and Dissertations

The thesis comprises three studies. The first study in this thesis (Chapter I) focused on a six-year corn field experiment to assess the influence of conservation agricultural practices on soil properties and their long-term effects on water-use efficiency and yield. Non-tillage management did not significantly reduce soil bulk density compared to conventional tillage, as no differences were observed between non-tillage and tillage systems throughout the 6-year experiment. There was no difference in total water-use efficiency among soil management practices in 2018, 2019, 2020, and 2021. Even though in one year of the study, a significant 24 kg ha-1 mm-1 improvement …

Cellular Control Of Proteostasis, Cytoskeleton Organization, And Polarity Remodeling During Infection-Related Development By The Rice Blast Fungus, Audra Rogers

Graduate Theses and Dissertations

Understanding the intricate processes underlying fungal infection-related development is crucial for combating plant pathogens. In this study, we investigate the coordination of morphogenetic transitions during plant infection by Magnaporthe oryzae, the blast fungus. We focus on three key aspects: protein quality control, cytoplasmic microtubule organization, and cell-end marker proteins. M. oryzae forms a specialized infection cell known as an appressorium. The proper formation of this cell is crucial for the pathogen to infect a susceptible host. First, we investigate protein quality control mechanisms during infection-related development. Our findings demonstrate that aggregated proteins are sequestered into quality control compartments within conidia …

Evaluation Of Water Hardness And Ph On Soybean And Cotton Insecticide Efficacy, Taylor Davis

Graduate Theses and Dissertations

Insecticide efficacy often varies by location and year. Many factors can influence an insecticide’s efficacy, but an often-overlooked factor is the quality of water in a carrier solution. Water quality includes many parameters, but two important ones are water hardness and pH. Research has shown that water hardness and pH can affect some pesticides. Multiple experiments were conducted to evaluate the impact of water hardness and pH on insecticide efficacy. Experiments were conducted to evaluate the impact of water hardness and pH on the efficacy and residual control of chlorantraniliprole for the control of corn earworm, Helicoverpa zea (Boddie). Leaf …

Examining The Hormonal Underpinnings Of Affiliation Motivation In Oral Contraceptive Users, Hormonal Iud Users, And Naturally Cycling Women, Mikayla Tolliver

Graduate Theses and Dissertations

Affiliation is important for women during times of stress. Although, affiliation has been linked to women’s hormones across the menstrual cycle, many women use hormonal contraceptives which disrupt the links between hormones, psychology, and behavior. This study examined how hormonal contraceptives (hormonal IUD vs. the oral contraceptive pill) and menstrual cycle phase (follicular vs. luteal) are associated with affiliative motivations following the Trier Social Stress Test (TSST). Further, this study examined women’s cortisol reactivity and whether cortisol reactivity mediated affiliative motivation following the stressor. I found that oral contraceptive pill users projected more stress and rejection onto others’ faces and …

Diminishing Creative Returns: Predicting Optimal Creative Performance Via Individual Differences In Executive Functioning, Kent F. Hubert

Graduate Theses and Dissertations

A robust finding in creativity research is that during idea generation, later (vs. earlier) responses on a divergent thinking task tend to be more creative, while the number of responses start off quickly, and then slow down over time, termed the serial order effect. Divergent thinking and time may follow a diminishing returns curve, where there is an optimal amount of time that should be spent while generating ideas. Executive functions (inhibition, updating, and shifting) have been associated with divergent thinking, specifically with the idea generation phase, but the effect of individual differences on the temporal dynamics of divergent thinking …

In Vitro And In Vivo Evaluation Of Antimicrobial Activity, Oocyst Sporulation Rate, Oocyst Integrity And Oocyst Infectivity In Eimeria Maxima M6 Oocyst Suspensions Treated With Chlorhexidine Salts In Comparison With Potassium Dichromate, Lauren Laverty

Graduate Theses and Dissertations

Eimeria species oocysts cause coccidiosis, one of the costliest diseases in the poultry industry. Coccidiosis infections cause significant economic losses due to reduced performance in chickens and turkeys. The objective of this thesis was to determine fecal bacterial recovery from chlorhexidine (CHX) salt suspensions containing Eimeria maxima M6 oocysts and evaluate the effect of CHX salts on oocysts during long-term cold storage. For bacterial recovery experiments, CHX digluconate and CHX gluconate were tested at different concentrations on poultry fecal slurries during oocyst shedding. Eimeria maxima M6 oocysts were evaluated in CHX salt suspensions to test the effect on oocyst degradation …

Examining Task-Related Differences In The Error-Related Negativity (Ern) As A Function Of Cognitive Control Strategy And Trait Anxiety, Russell Mach

Graduate Theses and Dissertations

Anxiety disorders pose a significant challenge to daily living, workplace productivity, and healthcare systems. Extant research supports empirical links between anxiety and brain-level error monitoring. The ERN – or error-related negativity – is one widely studied correlate of anxious symptomatology. Relatively stable individual differences in the ERN are inferred from electroencephalogram (EEG) recordings time-locked to the commission of mistakes. However, the assumed interchangeability of ERNs elicited under different experimental conditions has not been thoroughly evaluated. Canonical tasks for measuring the ERN may cue specific strategies for cognitive control, possibly producing divergent findings across studies. In a sample of 108 undergraduate …

Effect Of Onion Peel Bioactive Compounds On Gut Microbiome Of Obese Adults, Saad Al-Din Sifat

Graduate Theses and Dissertations

Obesity, a pervasive global health concern, involves a complex interplay between genetic factors, dietary patterns, and the gut microbiota. Onion peels are rich in polyphenols and known for their antioxidant properties. However, the effects of in-vitro digested onion peel extract has not been investigated thus far. This study therefore assesses the effects of digested bioactive compounds from onion peels, emphasizing gut microbiota shift and metabolites. Onion peel extract (OPE), digested onion peel extract (DOPE), and solid-phase-extracted digested onion peel extracts (SPE-DOPE) were analyzed for total phenolic content (TPC) and antioxidant activity. SPE-DOPE exhibited the highest TPC and antioxidant activity. Fecal …

Solar Cooking Solutions For Haiti, Isaac Mergner

Graduate Theses and Dissertations

This study focuses on enhancing the efficiency of solar cooking through the use of solar cookers and heat retention boxes. The research involved testing various cooking vessels and lids in a solar cooking experiment, with a specific focus on the performance of different materials and their heat retention capabilities. The experiment aimed to increase the efficiency of solar cookers, which are popular in developing nations due to their relatively low cost. The findings indicate that the combination of a solar cooker and a heat retention box can significantly improve the cooking process, particularly in areas with limited access to cooking …

A Framework Of Flow Models For The Development And Testing Of Cardiovascular Devices, Megan Laughlin

Graduate Theses and Dissertations

Cardiovascular disease (CVD) is the leading cause of death worldwide and its treatment continues to improve due to the advancement of innovative cardiovascular medical devices. In vitro and in silico models serve to replicate the in vivo environment for the development and testing of these devices prior to using animals for testing, and eventually humans in clinical trials. However, limitations related to these models exist in multiple areas including general, cardiac, and venous applications. Specifically, current gaps have been identified with customizable, tissue-mimicking phantoms (general), 2D Blood Speckle Imaging (BSI) (cardiac) and a bioprosthetic venous valve (venous). This dissertation focuses …

Understanding The Kinetics Of Laser-Induced Nanowelding Of Nanoparticles And The Motility Of Bacteria When Faced With Obstacles, Ariel Rogers

Graduate Theses and Dissertations

This dissertation has two focus areas: nanoparticle nanowelding and bacteria motility in the presence of micrometer sized structures. There are two main projects for the nanoparticle nanowelding studies: “Real-time imaging of laser-induced nanowelding in solution” and “Two-color laser-induced nanostructure shape modulation.” For the real-time imaging project, I used a fluorescence microscope, a 405 nm laser, and various python packages to quantify the average size of nanowelded nanostructures as a function of time and found that the average nanostructure growth over time fit the parameters of A¯(t) ∝ c0(1−e−t/τ), where c0 represents the initial concentration of nanoparticles in the solution and …

Exploring The Interrelationships Among Structural Complexity, Multi-Trophic Biodiversity, And Ecosystem Productivity In Forested Ecosystems., Ayanna St. Rose

Graduate Theses and Dissertations

Forests play a pivotal role in sustaining global biodiversity and mitigating the global climate, as they serve as the primary refuge for terrestrial biodiversity and effectively capture and store atmospheric carbon dioxide. However, changing climate and land use are altering the geographic distribution, physical structure, and productivity of forested ecosystems that can have profound impacts on biodiversity conservation, forest productivity, and global climate. This dissertation contributes to our understanding of multifaceted interactions between the physical and biological structural complexity and ecosystem functions in forested landscapes across the United states by using openly available data from two national networks: the National …

Bayesian Learning Of Spatiotemporal Source Distribution For Beached Microplastic In The Gulf Of Mexico, David Pojunas

Graduate Theses and Dissertations

Over the last several decades, plastic waste has gradually accumulated while slowly degrading in terrestrial and oceanic environments. Recently, there has been an increased effort to identify the possible sources of plastic to understand how they affect vulnerable beaches. This issue is of particular concern in the Gulf of Mexico due to the presence of oil, natural gas, and plastic production. In this thesis, we expand upon existing Bayesian plastic attribution models and develop a rigorous statistical framework to map observed beached microplastics to their sources. Within this framework, we combine Lagrangian backtracking simulations of floating particles using nurdle beaching …

Tissue-Engineered Models For Investigating Nerve Infiltration In Fibrotic Microenvironments, Nikolas Ala-Kokko

Graduate Theses and Dissertations

Neuron infiltration is involved in a multitude of diseased states and is critical in the regeneration of physiologic conditions. Modeling of innervation in three-dimensional, heterogenous, environments would allow early investigation in the crosstalk of neurons and native cells in normal and pathophysiologic microenvironments to gain an understanding of mechanistic functions. This would allow for greater insight into the role of metabolism, cell adhesion, microenvironmental alternations, cellular crosstalk, and signaling pathways that play a role in the promotion and prevention of neurite growth. In this thesis, with the construction of collagen-based hydrogels as the foundation for cell culture, we investigate cell …

Health Beneficial Effects Of Black Raspberry, Blueberry, And Blackberry Volatile Extracts In Lung And Colon, Inah Gu

Graduate Theses and Dissertations

Berries are one of the most consumed fruits in our diet, and rich in dietary fiber, vitamins, minerals, polyphenols, and volatiles. Volatiles are responsible for the aroma of berries, and are widely used in food, perfumery, and cosmetic industries. However, the potential health beneficial effects of berry volatiles have not been extensively studied. Recently, we found that berry volatiles from cranberries, black and red raspberries, strawberries, blueberries, and blackberries have an anti-inflammatory effect on inflamed murine macrophage cells. Since inflammation can develop into many chronic diseases, and berry volatiles can be inhaled or consumed and pass through the lungs or …