Digital Commons Network^™

Characterization Of Human Muscle Extracellular Matrix, Lauren Klaire Wilson

Graduate Theses and Dissertations

The performance of extracellular matrix (ECM) biological scaffolds for the treatment of volumetric muscle loss (VML) has shown promising results with regenerating native muscle in animal models and human patients. However, the limitations of these scaffolds include non-specific characteristics based on the original parameters of the muscle that is lost and this is why our group chose to characterize human skeletal ECM. By understanding the characteristics of the native human skeletal ECM, more desired queues for the biological scaffolds being used to treat VML can be provided. Upper limb and lower limb skeletal muscles were commercially obtained, decellularized using common …

Shiga Toxin-Producing Escherichia Coli (Stec) Detection Strategies With Formalin-Fixed Stec Cells, Christopher Adam Baker

Graduate Theses and Dissertations

Certain pathogenic Escherichia coli known as Shiga toxin (Stx)-producing Escherichia coli (STEC) are commensals in cattle, and typically cause bloody diarrhea in humans once the Stx toxin is secreted in invaded intestinal epithelial cells. Infections with STEC cells can lead to hemolytic uremic syndrome, which is commonly associated with kidney failure. Several STEC serogroups have been declared adulterants in raw, non-intact ground meat, and future regulations could potentially lead to a higher number of STEC serogroup detection strategies for these pathogenic microorganisms. Microbiological research laboratories may benefit from formalin-fixed STEC cells for periodic (daily, weekly, monthly, among others) instrument validation/calibration …

Novel Azole-Based Rearrangements, Kolawole Folayele Ayinuola

Graduate Theses and Dissertations

This work describes efforts targeted at the development of novel reactivity modes for the Breslow intermediate, which was proposed by Breslow to explain the mechanism of action of thiamine-dependent enzymes. By employing this intermediate as a hydroxy-substituted N,S-ketene acetal, we successfully captured it via Claisen rearrangement towards the preparation of diaryl tertiary alcohol products that are isomers of the hitherto elusive intermediate. This strategy also constitutes an unusual disconnection for a Claisen rearrangement precursor.

We have also uncovered an unprecedented radical C-N bond scission of a Breslow intermediate when a fluorenyl group is installed on the azolium nitrogen atom. This …

Alliaria Petiolata (M.Bieb.) Cavara & Grande [Brassicaceae], An Invasive Herb In The Southern Ozark Plateaus: A Comparison Of Species Composition And Richness, Soil Properties, And Earthworm Composition And Biomass In Invaded Versus Non-Invaded Sites, Jennifer D. Ogle

Graduate Theses and Dissertations

Invasive species are widely recognized as organisms that severely alter ecosystem processes in the habitats to which they are introduced. Alliaria petiolata is one of the most important invasive plants in forests of the northern United States. This study examined the geographic distribution of the plant in the southern Ozarks, as well as the effect that it may be having on natural processes within forests of the region by comparing plant species richness, plant cover, and soil properties in invaded and non-invaded plots. It was found that A. petiolata is not significantly altering species richness, cover, or soil properties in …

Paleoclimate Implications From Stable Isotope Analysis Of Sedimentary Organic Carbon And Vertebrate Fossils From The Cedar Mountain Formation, Ut, U.S.A., Garrett Andrew Hatzell

Graduate Theses and Dissertations

Oxygen and carbon isotopic compositions of fossilized vertebrate teeth and bone were analyzed to determine isotopic values of vertebrate faunal diet from the early Cretaceous Cedar Mountain Formation of Utah. Results for δ18O of PO4 (δ18Op) (Suarez et al., 2014) from the same data set have been compared to the δ18O of CO3 (δ18Oc) portion of teeth and turtle shell to determine if diagenetic alteration of the isotopes has occurred by plotting the line of best fit equation that models the relationship between unaltered δ18OP and δ18OC of modern mammals from Iacumin et al., 1996. Results indicate slight diagenesis of …

Effect Of Nitrogen Fertilizer Rates And Two-Spotted Spider Mite Incidence On 'Strawberry Festival' Strawberry Cultivar Performance, Megan E. Mcgovern

Graduate Theses and Dissertations

The decline in strawberry (Fragaria x ananassa Duch.) production in Arkansas over the last 50 years has sparked an interest in the use of season extension techniques to improve yield and fruit quality. High tunnel strawberry production has the potential to become a profitable and sustainable production system; however, information on nutrient and pest management is limited.

The overall objective of this study was to determine the response of ‘St. Festival’ strawberry cultivar to different nitrogen fertilizer rates in order to develop a fertilization program for strawberries grown under high tunnel production systems. Experiments were conducted at the University of …

Using Peptoids To Build Robust, Efficient Microarray Systems, Dhaval Sunil Shah

Graduate Theses and Dissertations

Recent studies have shown microarrays to be indispensable for various biological applications, allowing for high-throughput processing and screening of biological samples such as RNA, DNA, proteins and peptides using a small sample volume (< 1 µL). Peptoids (poly-N-substituted glycine oligomers) can be used as a substitute for antibodies as capture molecules, as well as coatings for slides in antibody microarrays. The ease of synthesis of peptoids, high customizability with desired bioactivity, and speed of synthesis allows us to build a diagnostic system with a large dynamic range that can detect biomolecules from a minimal sample size. In this study, peptoid-based antibody mimics are designed to have both structural and functional features similar to those of antibodies, including a stable constant region (scaffolding) and a variable region for protein recognition. Peptoids previously screened via combinatorial library synthesis to be specific to bind Mdm-2 (mouse double minute 2 homolog) and GST (gluthathione S-transferase), have been synthesized. The protein recognition peptoids have been conjugated to PEG (polyethylene glycol) molecules with modified end groups; an amine group on one end that allows for immobilization and orientation on the slide, and an azide group on the other end that will allow for attachment to the peptoid through “click chemistry”. The number of capture molecules printed on the slides can be increased by making the available surface area of the slide larger via coating with microspheres. We have determined that partially water soluble peptoids that are also helical, can self-assemble into microspheres. Sequences have been developed that can consistently produce uniform microsphere coatings on slides that increase the overall surface area. A high surface area corresponds to a higher number of binding sites, and therefore a more sensitive system. The work done has shown that slides may be successfully coated in order to potentially improve the detection system.

The Technological Singularity: An Ideological Critique, Phillip Stephens

Graduate Theses and Dissertations

The Technological Singularity represents a confluence of techno-cultural narratives of progress in which the projected exponential growth of artificial intelligence and nanotechnology will usher in a moment of irrevocable change for the human race – a change that many claim is scant decades away. Although the concept saw its modern clarification by science fiction author Vernor Vinge, the Singularity sits astride both fictional and nonfictional narratives of the future. It is the aim of this study to explore the ideological discourses that emerge from texts on the Singularity and the unfathomable posthuman future it ushers in. Doing so reveals how …

Architectures For A Future South: Posthumanism And Ruin In The Novels Of Cormac Mccarthy, Joshua Ryan Jackson

Graduate Theses and Dissertations

This thesis reads the novels of Cormac McCarthy as posthuman southern literature to explain why fiction from the South after World War II could no longer convey a sense of place during postmodernity: that is, because the region's culture and economy were transitioning from predominantly humanistic thinking (i.e., believing that humans [and especially southern humans] are supreme beings) to predominantly posthumanistic thinking (i.e., believing that humans are not as supreme as they think they are). It argues that we can trace this ideological change over time via structural shifts in the South’s architectural record, which we see in the ruins …

Genetic Variation And Species Distribution Of Subterranean Termites In The Southeastern U.S. Focusing On Family Structure And The Invasive Formosan Subterranean Termite, Mark Allan Janowiecki

Graduate Theses and Dissertations

This work applies molecular genetic tools to distinguish the identity and understand the biology of termites, particularly Reticulitermes Holmgren and Coptotermes formosanus Shiraki (Isoptera: Rhinotermitidae) in the southeastern U.S. Termites are important economic pests costing billions of dollars annually to Americans but also are important wood decomposers in natural settings. Molecular tools are essential for species identification because of the morphological ambiguities among species. The cryptic nest structure of subterranean termites which prevents adequate sampling makes molecular genetic tools essential to examine an entire colony.

A molecular diagnostic technique was created to differentiate Coptotermes formosanus, an invasive species in the …

Characterization Of The Effects Of Bfgf And Gsk3Β Inhibitors On Embryoid Bodies Derived From Human Pluripotent Stem Cells, Jonathan Earls

Graduate Theses and Dissertations

Embryoid body (EB) formation is a common first step in many human pluripotent stem cell (hPSC) differentiation protocols. Previous work suggests that EBs are sensitive to growth factor withdrawal if they are derived from hPSCs maintained in feeder independent media such as mTeSR1. To promote cell survival, EBs generated from mTeSR1-adapted hPSCs are sometimes cultured in a medium that contains basic fibroblast growth factor (bFGF), a trophic factor often used in hPSC cultures to maintain self-renewal. This distinguishes feeder independent hPSCs from feeder dependent hPSCs. The purpose of this study was to characterize the effects of bFGF as well as …

Economic Literacy: Measuring The Economic Human Capital Of Arkansas K-12 Teachers, June Marie Freund

Graduate Theses and Dissertations

Economic literacy is recognized as a deficit quality in the United States, no more prevalent than during the last great recession. It is paramount the K-12 educational system lead the movement to educate the public on economic content and issues, as it is the one institution that has direct contact with all citizens. The question then must be asked, how economic literate are teachers entrusted with the responsibility of imparting economic knowledge to his/her K-12 grade level student. A sample of Arkansas teachers at each grade level K – 12 were tested using national normed economic literacy tests designed to …

Designing Fret Assays To Study Electrostatic Interactions Pertaining To The Binding Of Intrinsically Disordered Proteins, Ashley Ann Howard

Graduate Theses and Dissertations

Fibroblast growth factor receptor plays a major role in several biological processes. Without FGFR, a human cannot live. FGFR is involved in cell differentiation and wound healing. Of course, if FGFR signaling becomes unregulated, it causes severe distress in the body. Several cancers are contributed to high signaling levels, as well as developmental conditions like rickets and Kallmann’s syndrome. FGFR is thought to undergo an auto-inhibition (or self-regulatory) process in order to try to facilitate regulation. The exact method of this inhibition is currently unknown, but is proposed to involve the unstructured acid box region of FGFR. We developed a …

In Vitro Microdialysis Sampling Collection Of Volatile Organic Compounds (Voc's), Dodecafluoropentane (Ddfp) And Isoflurane, Valerie Shannon Mckinney

Graduate Theses and Dissertations

Death by stroke occurs every four minutes to human beings. Strokes cause necrosis within the tissue of the brain due to deprivation of oxygen. Perfluorocarbons have the ability to transport oxygen to tissue and in return decrease cell death. Dodecafluoropentane (DDFP) is a volatile fluorocarbon and collection in vivo can be a challenge since this compound evaporates at room temperature. There is currently not an efficient collection method in vivo for compounds that are volatile. Without a method to collect DDFP it is impossible to be approved for clinical use since exact concentrations of the drug within the body will …

Preferences And Nutrient Composition: The Impact Of Flour Types On Battered Fried Food, Lobat Siahmakoun

Graduate Theses and Dissertations

This study investigated the impact of different flour-batter types on protein rich food in regard to people’s overall liking and sensory preferences (saltiness, flavor, texture, moisture, and color). In addition, all battered fried chicken, fish, shrimp, pork, and beef were analyzed for fat, calories, and protein content in the Central Analytical Laboratory at the University of Arkansas. Two hundred thirty-five participants completed the questionnaire containing five major sections. Respondents evaluated samples of battered fried chicken, fish, shrimp, pork, and beef using all-purpose flour (APF), rice-flour (RF), and potato flour (PF). Data was analyzed using binomial analysis and paired sample t-test …

Grass Finishing Systems For Lambs, Erin Leigh Smyth

Graduate Theses and Dissertations

There is strong interest in sustainably produced meat. Grass-fed lamb could fulfill this market by reducing off-farm inputs. The objective was to examine the effect of grass-finishing or minimal supplementation on performance of lambs in the southeastern US. Katahdin lambs born in October 2013 and 2014 and February 2014 were weaned in January 2014/2015 and May 2014, respectively. Lambs were blocked by gender (fall; winter included only ram lambs) and randomly assigned to receive no (NON) or grain co-product supplement (SUP; 15% CP) at 0.5% of BW/d. Lambs were rotationally grazed on predominantly grass. Body weight, fecal egg counts (FEC), …

The Fascination Of Manga: Cross-Dressing And Gender Performativity In Japanese Media, Sheena Marie Woods

Graduate Theses and Dissertations

The performativity of gender through cross-dressing has been a staple in Japanese media throughout the centuries. This thesis engages with the pervasiveness of cross-dressing in popular Japanese media, from the modern shōjo gender-bender genre of manga and anime to the traditional Japanese theatre. Drawing on theories from gender-studies and performance aesthetics to delineate the female gender in traditional Japanese theatre, I follow the roles of, representation of, and media for women, concentrating on (1) manga, a form of sequential art featuring illustrations with corresponding text, (2) anime, animated productions (where the word anime is the abbreviated pronunciation of “animation” in …

Spatiotemporal Fluctuations Of Olfactory Stimuli And Its Detection By An Optical Method, Mitu Chandra Acharjee

Graduate Theses and Dissertations

Olfactory processing in the mammalian brain is a highly dynamic process, yet most of the olfaction experiments have been studied primarily with static stimuli. Odors in the natural environment are transported by turbulent flow of air or water. Natural odorants have fluctuations in concentration and it changes rapidly with time. These rapid fluctuations may pose some challenges to identifying an odor; on the other hand, the variation itself may provide important clues about the odor source. The goal of this thesis project was to create a similar odorant environment like the rapid odor fluctuations encountered in nature – to meet …

Comparison Of Different Modulators That Affect Macrophage Activation In Vitro, Alda Alexa Díaz Pérez

Graduate Theses and Dissertations

Inflammation is known as a mechanism to regulate and control infections as well as promote tissue repair. Macrophages (Mф) are known to be a major cell type in the initiation, sustainability and resolution of inflammation. Moreover, Mф are essential for the remodeling process that is also known as the wound healing response. The objective of this research was to compare five modulators (acetylsalicylic acid (ASA), dexamethasone (DEX), prostaglandin E2 (PGE2), iloprost, and resolvin D1 (RvD1) for their anti-inflammatory effects on macrophages in vitro. Then, Mф phenotype in terms of gene expression and secreted cytokine response was determined. Our study compared …

Novel Biomarkers For Calcium And Phosphorus Metabolism In Breeder Hens And Broilers, Andrew Dick Magnuson

Graduate Theses and Dissertations

Broiler breeder hens are subject to the dual expectation to not only maintain a high production of eggs for an extended time period, but to produce eggs which can support the life of chicks which will be used for either meat production or as parent stock. Egg fertility and hatchability are heavily influenced by the thickness of the egg shell, the mineral calcium carbonate shell of the egg necessary for protecting the embryo growing inside. Many factors affect egg shell quality including age of the hen, diet, environmental conditions, genetic strain, stress, disease, and nutrition. Laying hens will mobilize calcium …

A Morpho-Physiological Analysis Of Diverse Drought Resistant And Sensitive Rice Genotypes To Identify Distinguishing Anatomical Root Phenes, Clinton Philip Greub

Graduate Theses and Dissertations

A set of 37 genotypes selected from a survey of over 200 diverse germplasms, for their diverse drought tolerance mechanisms, were analyzed in this study for root physiological traits that are indicative of different drought resistance mechanisms. The genotypes include controls such as the drought sensitive IR64 and Nipponbare, along with the drought resistant Nagina 22 (N22) and Bengal landraces to identify distinguishing phenotypic features of resistant accessions. Anatomical traits studied include total areas of the cross-sections of the stele, cortex, aerenchyma, cortical-cell, and xylem tissue; the number of aerenchyma, xylem vessels, cortical cell file number and size that together …

Physiological Responses Of Cotton Genotypes To Water-Deficit Stress During Reproductive Development, Cristiane Pilon

Graduate Theses and Dissertations

Drought stress is one of the major abiotic factors affecting crop growth and limiting production worldwide. Cotton genotypes vary in drought tolerance, and the effects of drought stress on the anatomy and physiology of cotton leaves and roots have been reported. However, information on physiological and metabolic processes of leaves and flowers of modern cotton cultivars under water-deficit stress during reproductive development is not well elucidated. It was hypothesized that water-deficit stress during squaring and flowering stages would impair stomatal conductance and photosynthetic efficiency of leaves, which consequently would result in osmotic adjustment through accumulation of compatible solutes, increased activity …

The Spectacle Of Orphanhood: Reimagining Orphans In Postbellum Fiction, Afrin Zeenat

Graduate Theses and Dissertations

Orphan iconography has always been deployed in American literature and culture, but nineteenth-century American literature, fiction in particular, abounds in orphans, both real and imaginary. The orphan’s amphibious nature is hailed and demonized as the epitome of individualism and unbridled freedom, and also as the location of society’s anxiety. This complicated and conflicted construction of orphans animates the Social and cultural realm in postbellum America, foregrounding issues of class, race, and gender.

Redefining Access To Public Space: Community Relations In A New Immigrant Setting, Aaron Isaac Arredondo

Graduate Theses and Dissertations

This article examines how and to what extent charging an entrance fee at a public recreational space in a new immigrant setting affects the participation of Latino and migrant population groups at The Jones Center for Families (JCF) in Springdale, Arkansas. This study also documents how participants respond to the entrance fee system by looking at their available options to spend leisure time when living in an area with limited financial resources and recreational facilities. Using qualitative data collected in Northwest Arkansas (NWA), this study looks at how the transformation of JCF from a public to quasi-public space redefines relations …

Association Mapping For Elemental Concentration Resulting From Vegetative Stage Soil Waterlogging Stress In Wheat (Triticum Aestivum L.), Maria Nelly Arguello-Blanco

Graduate Theses and Dissertations

Soil waterlogging (WL) affects wheat production worldwide, including the southern of the U.S. Little is known about the genetics of tolerance mechanisms to WL, particularly of potentially toxic elements such as aluminum, iron and sodium. The objectives of this study were to use association mapping (AM) to identify SNP associated with the EC in the vegetative tissue of a set of 240 diverse soft winter wheat genotypes (AM panel) grown under field WL and to determine the impact of WL on wheat yield (GY) and yield components in a set 28 adapted cultivars (YT)

YT study showed reductions in GY …

Reducing Nutrient Runoff From Poultry Production Facilities Using Locally-Sourced Iron And Aluminum Byproducts, Sheri Lynn Herron

Graduate Theses and Dissertations

Phosphorus (P) inputs to fresh waters can accelerate the eutrophication process. Agricultural nutrient runoff has been shown to be a contributor of P and nitrogen (N). Broiler production areas were evaluated for their potential to contribute P and N to runoff. Broiler house dust (BHD) samples were analyzed and compared to broiler litter (BL), rainfall simulations were conducted on plots adjacent to broiler house fans to evaluate nutrient enrichment in runoff from deposited dust, and runoff was automatically sampled at two culverts draining the land around broiler houses. Following this, an on-farm byproduct containment and nutrient removal structure was designed …

The Comparative Effects Of Hot Yoga And Thermoneutral Yoga On Flexibility, Heart Rate, Sweat Rate, And Mood, Hannah Kirkland Campbell

Graduate Theses and Dissertations

Yoga is an ancient Indian philosophy, described as a therapeutic intervention and health maintenance practice that unites the mind and body to aid healing through the combination of physical postures, breathing techniques, and meditation. There is ample research regarding yoga practiced in an environment that is thermoneutral, or in an environment that does not alter the metabolic heat production or evaporative heat loss of people. However, minimal research exists on the increasingly popular form of yoga known as hot yoga, or yoga practiced in an environment that is often humidified and 95° F or warmer. This exploratory study compared the …

An Empirical Water Quality And Best Management Practice Prioritization Model For Select Arkansas Watersheds, James Mccarty

Graduate Theses and Dissertations

The purpose of this study was to prioritize subwatersheds using water quality data and watershed characteristics. Water quality data was provided through studies by the Arkansas Natural Resources Commission, Beaver Water District, Arkansas Water Resources Center, and publicly available USGS gage data. A total of 114 sites across five HUC-8 watersheds were analyzed, including 12 USGS gages. Watershed characteristic data was retrieved from USGS and Arkansas GeoStore geodatabase repositories. A significant linear relationship between baseflow and stormflow nutrient concentrations was established allowing for the use of baseflow concentrations in the prioritization methodology. Pearson correlation, linear regression, classification and regression tree, …

The Ability Of Select Probiotics To Reduce Enteric Campylobacter Colonization In Broiler Chickens, Sandip Shrestha

Graduate Theses and Dissertations

Campylobacter is the leading cause of foodborne illness worldwide and is often associated with consumption and/or mishandling of contaminated poultry products. Probiotic use in poultry has been an effective strategy in reducing other enteric foodborne pathogens but not consistently for Campylobacter. As Campylobacter resides and utilizes intestinal mucin for growth, isolates selected on the basis of mucin utilization might be a strategy to screen for efficacious probiotic bacterium. In this study, bacterial isolates demonstrating increased growth rates in mucin, in vitro (trials 1 or 2), or isolates demonstrating a reduction of Campylobacter counts when co-incubated with mucin, in vitro (trials …

The Impact Of Herbicide-Resistant Rice And Hybrid Rice Technology On Weedy Rice Evolution, Vijay Singh

Graduate Theses and Dissertations

Weedy rice (Oryza sativa L.) competes aggressively with rice, reducing yields and grain quality. ClearfieldTM rice, is nontransgenic herbicide-resistant (HR) rice introduced in 2002 to control weedy rice, has resulted in ALS-resistant weedy rice due to gene flow. Volunteers of ClearfieldTM rice (F2) accelerate the HR weedy rice evolution by acting as agents of gene flow. Weedy rice (89) collected from 11 counties in Arkansas were screened for resistance in a field experiment in Stuttgart (2011). Seventy-nine percent of accessions were resistant to imazethapyr and harbored S653N mutation. These HR weedy accessions were outcrosses of ClearfieldTM rice and weedy rice. …