Digital Commons Network^™

Uncertainty Quantification Driven Predictive Multi-Scale Model For Synthesis Of Mycotoxins, Sourav Banerjee, Gabriel A. Terejanu, Anindya Chanda

Faculty Publications

Many toxic molds synthesize and release an array of poisons, termed mycotoxins that have an enormous impact on human health, agriculture and economy [1]. These molds contaminate our buildings, indoor air and crops, cause life threatening human and animal diseases and reduce agricultural output [2]. In order to design appropriate approaches to minimize the detrimental effects of these fungi, it is essential to develop diagnostic methodologies that can rapidly and accurately determine based on fungal strains and their growth patterns, the extent of mycotoxin mediated damage caused to the environment.Here we developed a novel multi-scale predictive mathematical model that could …

Integrating Sequence And Array Data To Create An Improved 1000 Genomes Project Haplotype Reference Panel, Olivier Delaneau, Jonathan Marchini, Gil A. Mcveanh, Peter Donnelly, Gerton Lunter, Jonathan L. Marchini, Simon Myers, Anjali Gupta-Hinch, Zamin Iqbal, Iain Mathieson, Andy Rimmer, Dionysia K. Xifara, Angeliki Kerasidou, Claire Churchhouse, David M. Altshuler, Stacey B. Gabriel, Eric S. Lander, Namrata Gupta, Mark J. Daly, Mark A. Depristo, Eric Banks, Gaurav Bhatia, Mauricio O. Carneiro, Guillermo Del Angel, Giulio Genovese, Robert E. Handsaker, Chris Hartl, Steven A. Mccarroll, James C. Nemesh, Ryan E. Poplin, Stephen F. Schaffner, Khalid Shakir, Pardis C. Sabeti, Sharon R. Grossman

Faculty Publications

A major use of the 1000 Genomes Project (1000GP) data is genotype imputation in genome-wide association studies (GWAS). Here we develop a method to estimate haplotypes from low-coverage sequencing data that can take advantage of single-nucleotide polymorphism (SNP) microarray genotypes on the same samples. First the SNP array data are phased to build a backbone (or 'scaffold') of haplotypes across each chromosome. We then phase the sequence data 'onto' this haplotype scaffold. This approach can take advantage of relatedness between sequenced and non-sequenced samples to improve accuracy. We use this method to create a new 1000GP haplotype reference set for …

Identification And Characterization Of An Operon, Msaabcr, That Controls Virulence And Biofilm Development In Staphlococcus Aureus, Gyan S. Sahukhal, Mohamed O. Elasri

Faculty Publications

Background

Community-acquired, methicillin-resistant Staphylococcus aureus strains often cause localized infections in immunocompromised hosts, but some strains show enhanced virulence leading to severe infections even among healthy individuals with no predisposing risk factors. The genetic basis for this enhanced virulence has yet to be determined. S. aureus possesses a wide variety of virulence factors, the expression of which is carefully coordinated by a variety of regulators. Several virulence regulators have been well characterized, but others have yet to be thoroughly investigated. Previously, we identified the msa gene as a regulator of several virulence genes, biofilm development, and antibiotic resistance. We also …

P‐Nexfs Analysis Of Aerosol Phosphorus Delivered To The Mediterranean Sea, Amelia F. Longo, Ellery D. Ingall, Julia M. Diaz, Michelle Oakes, Laura E. King, Athanasios Nenes, Nikolaos Mihalopoulos, Kaliopi Violaki, Anna Avila, Claudia R. Benitez-Nelson, Jay Brandes, Ian Mcnulty, David J. Vine

Faculty Publications

Biological productivity in many ocean regions is controlled by the availability of the nutrient phosphorus. In the Mediterranean Sea, aerosol deposition is a key source of phosphorus and understanding its composition is critical for determining its potential bioavailability. Aerosol phosphorus was investigated in European and North African air masses using phosphorus near‐edge X‐ray fluorescence spectroscopy (P‐NEXFS). These air masses are the main source of aerosol deposition to the Mediterranean Sea. We show that European aerosols are a significant source of soluble phosphorus to the Mediterranean Sea. European aerosols deliver on average 3.5 times more soluble phosphorus than North African aerosols …

Artemisia Scoparia Enhances Adipocyte Development And Endocrine Function In Vitro And Enhances Insulin Action In Vivo, Allison J. Richard, Scott Fuller, Veaceslav Fedorcenco, Robbie Beyl, Thomas P. Burris, Randall Mynatt, David M. Ribnicky, Jacqueline M. Stephens

Faculty Publications

Background: Failure of adipocytes to expand during periods of energy excess can result in undesirable metabolic consequences such as ectopic fat accumulation and insulin resistance. Blinded screening studies have indicated that Artemisia scoparia (SCO) extracts can enhance adipocyte differentiation and lipid accumulation in cultured adipocytes. The present study tested the hypothesis that SCO treatment modulates fat cell development and function in vitro and insulin sensitivity in adipose tissue in vivo. Methods: In vitro experiments utilized a Gal4-PPARγ ligand binding domain (LBD) fusion protein-luciferase reporter assay to examine PPARγ activation. To investigate the ability of SCO to modulate adipogenesis and mature …

Broadband, Non-Destructive Characterisation Of Pec-Backed Materials Using A Dual-Ridged-Waveguide Probe, Milo W. Hyde Iv, Michael J. Havrilla

Faculty Publications

A new probe which utilises a dual-ridged waveguide to provide broadband, non-destructive (ND) material characterisation measurements of a perfect electric conductor (PEC)-backed material is introduced. The new probe possesses a bandwidth similar to existing coaxial probes and is structurally robust like rectangular waveguide probes. The combinations of these two qualities make it especially attractive for ND inspection/evaluation applications in the field. The theoretical development of the dual-ridged-waveguide probe is discussed. A magnetic field integral equation is derived by applying Love’s equivalence theorem and enforcing the continuity of transverse fields at the dual-ridged-waveguide aperture. The magnetic field integral equation is then …

Large Scale Screening Of Digeneans For Neorickettsia Endosymbionts Using Real-Time Pcr Reveals New Neorickettsia Genotypes, Host Associations And Geographic Records, Stephen Greiman, Vasyl V. Tkach, Eric Pulis, Thomas J. Fayton, Stephen S. Curran

Faculty Publications

Digeneans are endoparasitic flatworms with complex life cycles including one or two intermediate hosts (first of which is always a mollusk) and a vertebrate definitive host. Digeneans may harbor intracellular endosymbiotic bacteria belonging to the genus Neorickettsia (order Rickettsiales, family Anaplasmataceae). Some Neorickettsia are able to invade cells of the digenean's vertebrate host and are known to cause diseases of wildlife and humans. In this study we report the results of screening 771 digenean samples for Neorickettsia collected from various vertebrates in terrestrial, freshwater, brackish, and marine habitats in the United States, China and Australia. Neorickettsia were detected using a …

Synthesis, Spectroscopic, And Cellular Properties Of Α-Pegylated Cis-A2B2- And A3B-Types Znpcs, Benson G. Ongarora, Zehua Zhou, Elizabeth A. Okoth, Igor Kolesnichenko, Kevin M. Smith, M. Graça H. Vicente

Faculty Publications

© 2014 World Scientific Publishing Company. A series of pegylated cis-A2B2- or A3B-type ZnPcs, substituted on the α-positions with tri(ethylene glycol) and hydroxyl groups, were synthesized from a new bis-phthalonitrile. A clamshell-type bis-phthalocyanine was also obtained as a byproduct. The hydroxyl group of one ZnPc was alkylated with 3-dimethylaminopropyl chloride to afford a pegylated ZnPc functionalized with an amine group. All mononuclear ZnPcs were soluble in polar organic solvents, showed intense Q absorptions in DMF, and had fluorescence quantum yields in the range 0.10-0.23. The clamshell-type bis-phthalocyanine adopts mainly open shell conformations in DMF, and closed clamshell conformations in chloroform. …

A Cross-Species Study Of Gesture And Its Role In Symbolic Development: Implications For The Gestural Theory Of Language Evolution, K. Gillespie-Lynch, P. M. Greenfield, Y. Feng, S. Savage-Rumbaugh, H. Lyn

Faculty Publications

Using a naturalistic video database, we examined whether gestures scaffold the symbolic development of a language-enculturated chimpanzee, a language-enculturated bonobo, and a human child during the second year of life. These three species constitute a complete clade: species possessing a common immediate ancestor. A basic finding was the functional and formal similarity of many gestures between chimpanzee, bonobo, and human child. The child's symbols were spoken words; the apes' symbols were lexigrams - non-iconic visual signifiers. A developmental pattern in which gestural representation of a referent preceded symbolic representation of the same referent appeared in all three species (but was …

Vaccination Perceptions Of School Employees In A Rural School District, Janelle L. B. Macintosh

Faculty Publications

Background: There continues to be a need for increases in adult vaccination rates, especially among those working in environments which may easily become communicable disease outbreak centers, such as school employees in the school environment. The purpose of this study was to evaluate why rural Utah school employees were non-compliant with the influenza and measles, mumps, and rubella (MMR) vaccines, as well as to identify their view on mandatory vaccination policies.

Methods: A questionnaire was distributed to all school employees in a rural Utah school district. Data analysis included frequencies and measures of central tendency and dispersion for quantitative items …

Reflections On Presumed Incompetent: The Intersections Of Race And Class For Women In Academia Symposium—The Plenary Panel, Stephanie M. Wildman, Angela Mae Kupenda, Maritza I. Reyes, Angela Onwauchi-Willig, Adiren Katherine Wing

Faculty Publications

Reflections on Presumed Incompetent: The Intersections of Race and Class for Women in Academia Symposium--The Plenary Panel in the Berkeley Journal of Gender, Law & Justice represents the author’s reflections on the recent important book PRESUMED INCOMPETENT edited by Gabriella Gutiérrez y Muhs, Yolanda Flores Niemann, Carmen G. González, and Angela P. Harris. PRESUMED INCOMPETENT has started a national movement of attention to treatment of women of color in academia; google the reviews and check out the book’s Facebook presence. In this recreation of the symposium plenary, the panelists discuss issues surrounding race and gender in academia, particularly in law …

Interspecific Variation In Juvenile Snapper Otolith Chemical Signatures In The Northern Gulf Of Mexico, William F. Patterson Iii, Beverly K. Barnett, Michelle Zapp Sluis, James Howan Cowan Jr., Alan M. Shiller

Faculty Publications

The objective of this study was to evaluate whether age-0 lane snapper Lutjanus synagris otolith chemical signatures could serve as accurate proxies for those of its congener, red snapper L. campechanus, among northern Gulf of Mexico (GOM) nursery regions. Red (n = 90) and lane (n = 53) snappers were sampled from 3 regions of the northern GOM in fall 2005, and their otolith chemistry was analyzed with sector field-inductively coupled plasma-mass spectrometry (Ba:Ca, Mg:Ca, Mn:Ca, Sr:Ca, Li:Ca) or stable isotope ratio-mass spectrometry (δ¹³C and δ¹⁸O). Chemical signatures were significantly different among regions (MANOVA, p < 0.001) and between species (MANOVA, p = 0.029), with the species effect being driven by significant differences in 4 of the 7 constituents analyzed (ANOVA, p < 0.036). The significant region effect persisted (MANOVA, p < 0.001), but the species effect was non-significant (MANOVA, p = 0.964) when constituent values were normalized to species-specific means. Mean regional classification accuracies from linear discriminant functions computed with otolith constituent data were 84% for lane snapper and 80% for red snapper whether data were normalized or not. Maximum likelihood models parameterized with normalized lane snapper otolith chemistry data estimated red snapper regional composition reasonably well among mixed-region samples (mean error = 9.7% among models). Therefore, it appears age-0 lane snapper otolith chemical signatures can serve as accurate proxies for those of red snapper in the northern GOM. These results have broader implications for deriving natural tags based on otolith chemistry for fishes that may have low abundance in parts of their range.

Environmentally Persistent Free Radicals Inhibit Cytochrome P450 Activity In Rat Liver Microsomes, James R. Reed, George F. Cawley, Taylor G. Ardoin, Barry Dellinger, Slawomir M. Lomnicki, Farhana Hasan, Lucy W. Kiruri, Wayne L. Backes

Faculty Publications

Combustion processes generate particulate matter that affects human health. When incineration fuels include components that are highly enriched in aromatic hydrocarbons (especially halogenated varieties) and redox-active metals, ultrafine particulate matter containing air-stable, environmentally persistent free radicals (EPFRs) is generated. The exposure to fine EPFRs (less than 2.5. μm in diameter) has been shown to negatively influence pulmonary and cardiovascular functions in living organisms. The goal of this study was to determine if these EPFRs have a direct effect on cytochrome P450 function. This was accomplished by direct addition of the EPFRs to rat liver microsomal preparations and measurement of several …

The Development Of Sleep-Wake Rhythms And The Search For Elemental Circuits In The Infant Brain, Mark S. Blumberg, Andrew J. Gall, William D. Todd

Faculty Publications

Despite the predominance of sleep in early infancy, developmental science has yet to play a major role in shaping concepts and theories about sleep and its associated ultradian and circadian rhythms. Here we argue that developmental analyses help us to elucidate the relative contributions of the brainstem and forebrain to sleep-wake control and to dissect the neural components of sleep-wake rhythms. Developmental analysis also makes it clear that sleep-wake processes in infants are the foundation for those of adults. For example, the infant brainstem alone contains a fundamental sleep-wake circuit that is sufficient to produce transitions among wakefulness, quiet sleep, …

Meal Pattern Of Male Rats Maintained On Amino Acid Supplemented Diets: The Effect Of Tryptophan, Lysine, Arginine, Proline And Threonine, Raghad Ayaso, Hala Ghattas Ph.D., Mohamad Abiad, Omar Obeid

Faculty Publications

The macronutrient composition of the diet has been shown to affect food intake, with proteins having distinct effects. The present study investigated the effect of diet supplementation with individual amino acids (tryptophan, lysine, arginine, proline and threonine) on meal pattern among male rats. Meal pattern and body weight were monitored for two weeks. Proline and threonine had minimal effects on meal pattern, while the most pronounced changes were observed in the tryptophan group. Both tryptophan and lysine decreased overall food intake, which was translated into a reduction in body weight. The reduced food intake of the tryptophan group was associated …

Contribution Of Surface Leaf-Litter Breakdown And Forest Composition To Benthic Oxygen Demand And Ecosystem Respiration In A South Georgia Blackwater River, Andrew S. Mehring, Kevin A. Kuehn, Cynthia J. Tant, Catherine M. Pringle, R. Richard Lowrance, George Vellidis

Faculty Publications

Many North American blackwater rivers exhibit low dissolved O₂ (DO) that may be the result of benthic respiration. We examined how tree species affected O₂ demand via the quantity and quality of litter produced. In addition, we compared areal estimates of surface leaf-litter microbial respiration to sediment O₂ demand (SOD) and ecosystem respiration (ER) in stream and swamp reaches of a blackwater river to quantify contributions of surface litter decomposition to O₂ demand. Litter inputs averaged 917 and 678 g m⁻² y⁻¹ in the swamp and stream, respectively. Tree species differentially affected O_{2 …}

Investr: An R Package For Inverse Estimation, Brandon M. Greenwell, Christine M. Schubert Kabban

Faculty Publications

Inverse estimation is a classical and well-known problem in regression. In simple terms, it involves the use of an observed value of the response to make inference on the corresponding unknown value of the explanatory variable. To our knowledge, however, statistical software is somewhat lacking the capabilities for analyzing these types of problems. In this paper, we introduce investr (which stands for inverse estimation in R), a package for solving inverse estimation problems in both linear and nonlinear regression models.

Hurricane Activity And The Large-Scale Pattern Of Spread Of An Invasive Plant Species, Ganesh P. Bhattarai, James T. Cronin

Faculty Publications

Disturbances are a primary facilitator of the growth and spread of invasive species. However, the effects of large-scale disturbances, such as hurricanes and tropical storms, on the broad geographic patterns of invasive species growth and spread have not been investigated. We used historical aerial imagery to determine the growth rate of invasive Phragmites australis patches in wetlands along the Atlantic and Gulf Coasts of the United States. These were relatively undisturbed wetlands where P. australis had room for unrestricted growth. Over the past several decades, invasive P. australis stands expanded in size by 6-35% per year. Based on tropical storm …

Detection And Cellular Imaging Of Human Cancer Enzyme Using A Turn-On, Wavelength-Shiftable, Self-Immolative Profluorophore, Suraj U. Hettiarachchi, Bijeta Prasai, Robin L. Mccarley

Faculty Publications

A frontier area in the development of activatable (turn-on) fluorescence-based probes is that concerned with rapid and selective stimulus triggering of probe activation so as to allow for biomarker identification and cellular imaging. The work here is concerned with a cloaked fluorophore composed of a reporter whose fluorescence is efficiently quenched by it being bound to an activatable trigger group through a novel self-immolative linker. Highly selective and rapid activation of the trigger group is achieved by chemical and enzymatic means that result in activated trigger group detachment from the self-immolative linker, with the latter subsequently cleaved from the reporter …

Binding Of Solvated Peptide (Eplqlkm) With A Graphene Sheet Via Simulated Coarse-Grained Approach, Somayyeh Sheikholeslami, R. B. Pandey, Nadiya Dragneva, Wely Floriano, Oleg Rubel, Stephen A. Barr, Zhifeng Kuang, Rajiv Berry, Rajesh Naik, Barry Farmer

Faculty Publications

Binding of a solvated peptide A1 (¹E ²P ³L ⁴Q ⁵L ⁶K ⁷M) with a graphene sheet is studied by a coarse-grained computer simulation involving input from three independent simulated interaction potentials in hierarchy. A number of local and global physical quantities such as energy, mobility, and binding profiles and radius of gyration of peptides are examined as a function of temperature (T). Quantitative differences (e.g., the extent of binding within a temperature range) and qualitative similarities are observed in results from three simulated potentials. Differences in variations of both local and …

Implications Of The Landauer Limit For Quantum Logic, F. Matthew Mihelic

Faculty Publications

The design of any system of quantum logic must take into account the implications of the Landauer limit for logical bits. Useful computation implies a deterministic outcome, and so any system of quantum computation must produce a final deterministic outcome, which in a quantum computer requires a quantum decision that produces a deterministic qubit. All information is physical, and any bit of information can be considered to exist in a physicality represented as a decision between the two wells of a double well potential in which the energy barrier between the two wells must be greater than kT·ln2. Any proposed …

Amplification Of Angular Rotations Using Weak Measurements, Omar S. Magaña-Loaiza, Mohammad Mirhosseini, Brandon Rodenburg, Robert W. Boyd

Faculty Publications

We present a weak measurement protocol that permits a sensitive estimation of angular rotations based on the concept of weak-value amplification. The shift in the state of a pointer, in both angular position and the conjugate orbital angular momentum bases, is used to estimate angular rotations. This is done by an amplification of both the real and imaginary parts of the weak-value of a polarization operator that has been coupled to the pointer, which is a spatial mode, via a spin-orbit coupling. Our experiment demonstrates the first realization of weak-value amplification in the azimuthal degree of freedom. We have achieved …

Male-Male Clasping May Be Part Of An Alternative Reproductive Tactic In Xenopus Laevis, Heather J. Rhodes, Rachel J. Stevenson, Courtney L. Ego

Faculty Publications

No abstract provided.

Genomic Classification Of The Ras Network Identifies A Personalized Treatment Strategy For Lung Cancer, Nader N. El-Chaar, Stephen R. Piccolo, Kenneth M. Boucher, Adam L. Cohen, Jeffrey T. Chang, Philip J. Moos, Andrea H. Bild

Faculty Publications

Better approaches are needed to evaluate a single patient's drug response at the genomic level. Targeted therapy for signaling pathways in cancer has met limited success in part due to the exceedingly interwoven nature of the pathways. In particular, the highly complex RAS network has been challenging to target. Effectively targeting the pathway requires development of techniques that measure global network activity to account for pathway complexity. For this purpose, we used a gene-expression-based biomarker for RAS network activity in non-small cell lung cancer (NSCLC) cells, and screened for drugs whose efficacy was significantly highly correlated to RAS network activity. …

Time-Varying, Serotype-Specific Force Of Infection Of Dengue Virus, Kanya C. Long, Robert C. Reiner, Steven T. Stoddard, Brett M. Froshey, Aaron A. King, Alicia M. Ellis, Alun L. Lloyd, Claudio Rocha, Stalin Vilcarromero, Helvio Astete, Isabel Bazan, Audrey Lenhart, Gonzalo M. Vazquez-Prokopec, Valerie A. Paz-Soldan, Phlip J. Mccall, Uriel Kitron, John P. Elder, Eric S. Halsey, Amy C. Morrison, Tadeusz J. Kochel, Thomas W. Scott

Faculty Publications

Infectious disease models play a key role in public health planning. These models rely on accurate estimates of key transmission parameters such as the force of infection (FoI), which is the percapita risk of a susceptible person being infected. The FoI captures the fundamental dynamics of transmission and is crucial for gauging control efforts, such as identifying vaccination targets. Dengue virus (DENV) is a mosquito-borne, multiserotype pathogen that currently infects ∼390 million people a year. Existing estimates of the DENV FoI are inaccurate because they rely on the unrealistic assumption that risk is constant over time. Dengue models are thus …

Community Structures In Bipartite Networks: A Dual-Projection Approach, David Melamed

Faculty Publications

Identifying communities or clusters in networked systems has received much attention across the physical and social sciences. Most of this work focuses on single layer or one-mode networks, including social networks between people or hyperlinks between websites. Multilayer or multi-mode networks, such as affiliation networks linking people to organizations, receive much less attention in this literature. Common strategies for discovering the community structure of multi-mode networks identify the communities of each mode simultaneously. Here I show that this combined approach is ineffective at discovering community structures when there are an unequal number of communities between the modes of a multi-mode …

Do The Beaf Insulator Proteins Regulate Genes Involved In Cell Polarity And Neoplastic Growth?, Craig M. Hart

Faculty Publications

It was reported that a chromosome with the BEAFNP6377 (NP6377) allele leads to a loss of cell polarity and neoplastic growth in Drosophila melanogaster when homozygous (Gurudatta et al., 2012). We had previously generated the BEAFAB-KO (AB-KO) allele by homologous recombination and did not note these phenotypes (Roy et al., 2007). Both alleles are null mutations. It was unclear why two null alleles of the same gene would give different phenotypes. To resolve this, we performed genetic tests to explore the possibility that the chromosome with the NP6377 allele contained other, second site mutations that might account for the different …

Social Opportunity Rapidly Regulates Expression Of Crf And Crf Receptors In The Brain During Social Ascent Of A Teleost Fish, Astatotilapia Burtoni, Russ E. Carpenter, Karen P. Maruska, Lisa Becker, Russell D. Fernald

Faculty Publications

In social animals, hierarchical rank governs food availability, territorial rights and breeding access. Rank order can change rapidly and typically depends on dynamic aggressive interactions. Since the neuromodulator corticotrophin releasing factor (CRF) integrates internal and external cues to regulate the hypothalamic-pituitary adrenal (HPA) axis, we analyzed the CRF system during social encounters related to status. We used a particularly suitable animal model, African cichlid fish, Astatotilapia burtoni, whose social status regulates reproduction. When presented with an opportunity to rise in rank, subordinate A. burtoni males rapidly change coloration, behavior, and their physiology to support a new role as dominant, reproductively …

Comparative Systems Biology Reveals Allelic Variation Modulating Tocochromanol Profiles In Barley (Hordeum Vulgare L.), Rebekah E. Oliver, Emir Islamovic, Donald E. Obert, Mitchell L. Wise, Lauri L. Herrin, An Hang, Stephen A. Harrison, Amir Ibrahim, Juliet M. Marshall, Kelci J. Miclaus, Gerard R. Lazo, Gongshe Hu, Eric W. Jackson

Faculty Publications

Tocochromanols are recognized for nutritional content, plant stress response, and seed longevity. Here we present a systems biological approach to characterize and develop predictive assays for genes affecting tocochromanol variation in barley. Major QTL, detected in three regions of a SNP linkage map, affected multiple tocochromanol forms. Candidate genes were identified through barley/rice orthology and sequenced in genotypes with disparate tocochromanol profiles. Gene-specific markers, designed based on observed polymorphism, mapped to the originating QTL, increasing R2 values at the respective loci. Polymorphism within promoter regions corresponded to motifs known to influence gene expression. Quantitative PCR analysis revealed a trend of …

Mortality Risk And Survival In The Aftermath Of The Medieval Black Death, Sharon Dewitte

Faculty Publications

The medieval Black Death (c. 1347-1351) was one of the most devastating epidemics in human history. It killed tens of millions of Europeans, and recent analyses have shown that the disease targeted elderly adults and individuals who had been previously exposed to physiological stressors. Following the epidemic, there were improvements in standards of living, particularly in dietary quality for all socioeconomic strata. This study investigates whether the combination of the selective mortality of the Black Death and post-epidemic improvements in standards of living had detectable effects on survival and mortality in London. Samples are drawn from several pre- and post-Black …