Digital Commons Network^™

Newel Kay Brown, Myrna J. Layton

Faculty Publications

Newel Kay Brown (February 29, 1932 – ) is an American composer, conductor, and arranger. He was chair of the Composition Division in the College of Music at the University of North Texas before his retirement.

Chronosort: Revealing Hidden Dynamics In Alphafold3 Structure Predictions, Matthew J. Argyle, William P. Heaps, Corbyn Kubalek, Spencer Gardiner, Bradley C. Bundy, Dennis Della Corte

Faculty Publications

Protein function emerges from dynamic conformational changes, yet structure prediction methods provide only static snapshots. While AlphaFold3 (AF3) predicts protein structures, the potential for extracting dynamic information from its ensemble predictions has remained underexplored. Here, we demonstrate that AF3 structural ensembles contain substantial dynamic information that correlates remarkably well with molecular dynamics simulations (MD). We developed ChronoSort, a novel algorithm that organizes static structure predictions into temporally coherent trajectories by minimizing structural differences between neighboring frames. Through systematic analysis of four diverse protein targets, we show that root-mean-square fluctuations derived from AF3 ensembles can correlate strongly with those from MD …

State Courts, Public Opinion, And The Changing Abortion Landscape After Dobbs, Anna Gunderson, Chesani Askew, Jeong Hyun Kim, Nichole Bauer

Faculty Publications

The June 24, 2022 Supreme Court decision in Dobbs v. Jackson Women’s Health Organization represented a seismic shift in abortion policy in the United States. Since then, state courts have begun playing an integral role in expanding or restricting abortion access in their jurisdictions. What do these cases look like and how does the public respond to court decisions that are pro- or anti-abortion? We collect original data on state court abortion cases post-Dobbs and field two survey experiments pre- and post-Dobbs to investigate these questions. We find state courts have expanded their scope in abortion policy and that pro-abortion …

Local Injection Of Particles For Retinoic Acid Drug Delivery Improves Muscle Structure And Modulates Inflammation In Mice Recovering From Cast Immobilization, Candice V. Cheung, Regina A. Searcy, Kidochukwu J. Atube, Nicholas A. Colonna, Kelsey E. Krusen, Kate J. Cappage, Khufu M. Holly, R. Paul Ward Pratz, Jessie H. Fournier, Vitali Sikirzhytski Ph.D.

Faculty Publications

Disuse muscle atrophy secondary to acute illness or injury prolongs recovery and increases risk of permanent disability as a result of reduced muscle strength and myofiber damage upon reambulation. However, there are no pharmacotherapies to support muscle growth and repair following prolonged immobility. We propose that all-trans retinoic acid (ATRA) may support recovery of atrophied muscle via modulation of satellite cells and macrophages. Clinical application of ATRA is hindered by solubility, stability, and the need for high systemic doses. Therefore, in the current study, we developed poly(lactide-co-glycolide) (PLG) particles for local injection and extended release of ATRA (ATRA-PLG) and investigated …

Shining A Light On Firms’ Political Connections: The Role Of Dark Money, Matthew Denes, Madeline Scanlon

Faculty Publications

We study the emergence of a new channel for firms’ political activity using dark money through undisclosed and unlimited contributions. After the U.S. federal court decisions in 2010, S&P 500 firms substantially increased their use of dark money. We find that dark money contributions complement political engagement through campaign contributions and lobbying. Firms disclose dark money contributions when they face heightened nondisclosure costs. Firms contributing to dark money groups benefit by receiving more procurement contracts and increased government subsidies. Our findings highlight that political connections by firms are evolving and expanding through new and largely unexplored channels. (JEL D72, …

We Are Here Because Of Them: Co-Creating A Native Cemetery Memorial At Mission Santa Clara, Lee M. Panich, Amy J. Lueck, Lauren Baines, Isabella ‘Amne Gomez

Faculty Publications

Tens of thousands of Native individuals perished in California’s twenty-one Franciscan missions that operated from the 1760s into the 1840s, but most public interpretive programs gloss over their lives and the cemeteries where they are interred. This has historically been the case at Mission Santa Clara, on the campus of Santa Clara University. In this article, we reflect on the process of co-creating an interactive memorial designed to honor the Native people buried in two colonial-era cemeteries related to the mission and link their lives to the descendant community today. Importantly, the co-creation process helped strengthen relationships in numerous directions, …

Recommendations From Multi-Disciplinary Professionals For Survivor-Informed And Comprehensive Care For Human Trafficking Survivors, Christina Tsoi, Timothy B. Smith, Elizabeth Cutrer-Párraga, Devan Clayton, Joshua M. Marshall, Jamila Mastny

Faculty Publications

Background: Human trafficking affects millions of people worldwide with multiple adverse outcomes including psychopathology. Although research on human trafficking has become abundant in other academic disciplines (e.g., public health, criminology, social work), healthcare research specific to the mental health treatment of survivors remains limited. Objective: The purpose of this study was to gather recommendations from professionals about mental health treatment of trafficking survivors. Method: Semi-structured interviews were conducted with 21 multidisciplinary professionals working with trafficking survivors. Data were analyzed using qualitative content analysis methodology. Results: An overarching theme derived from the data concerned the recommendation to implement trafficking survivor-informed care, …

Anti-Holistic Algorithms, Itay Ravid

Faculty Publications

This Article presents a critical tension in modern criminal justice between holistic criminal-justice aspirations and algorithmic governance: whether the holistic rehabilitation and reintegration project can survive technological determinism. As criminal legal systems embrace algorithmic risk- assessment tools as solutions to address recidivism, this Article reveals a profound epistemological concern: the fundamental incompatibility between viewing offenders as “whole persons” capable of transformation and reducing them to statistical probabilities within computational matrices. By doing so, it demonstrates how algorithmic mediation fundamentally alters—and potentially destroys—the holistic message itself.

In establishing this argument, the Article advances in two stages. It first identifies the development …

Under-Marketing Women’S Sport: The Gendered Labor Of Value Co-Creation In U.S. Women’S Soccer, Tarlan Chahardovali Ph.D., Joshua I. Newman Ph.D.

Faculty Publications

Research Question: This study explores how professional women soccer players in the U.S. perceived the role of institutional actors in value co-creation during a pivotal period in the sport’s development. It examines the marketing responsibilities players were expected to undertake and how this labor shaped their experiences and self-perceptions. Research Methods: Guided by value co-creation and value realization frameworks, this study draws on semi-structured interviews with 22 current and former professional women soccer players. Data were analyzed in two stages: first cycle coding, followed by pattern coding to consolidate labor themes into constructs reflecting athletes’ experiences of institutional support, promotional …

Toward A Feminist Geo-Legal Reading: Us Country-Of-Origin Information In Asylum Adjudication, Malene H. Jacobsen, Austin Crane, Elise Dosch

Faculty Publications

In this article, we offer what we call ‘a feminist geo-legal reading’ of documents used in spaces and practices of law. Legal cases and decisions are often based on different legal and non-legal documents, including laws, explanatory memorandums, testimonies, medical reports, and so forth. In contemporary asylum adjudication, country-of-origin information reports (COIs) have become a crucial source of authoritative evidence as asylum officers and immigration judges use these reports in their determination of a person's need for and right to protection. However, there is no straight line from COIs' substance to the prevailing authority that they command within asylum adjudication. …

Ktrb-Mediated Alkaline Adaptation Drives Enterococcus Faecalis Persistence In The Gastrointestinal Tract Of Helicoverpa Zea, Patrick J. Hurd, Vivian Veto, Geneva Bell, Jerreme J. Jackson

Faculty Publications

Enterococcus faecalis is a commensal enteric bacterium capable of surviving in extreme and diverse environments. Here, we characterized the role of the gene ntpJ, which encodes the KtrB subunit of the KtrAB Na⁺/K⁺ symporter, during the adaptation of E. faecalis to alkaline stress and persistence in Helicoverpa zea (corn earworm). We assessed growth kinetics, biofilm formation, surface adhesion, and gastrointestinal persistence in vivo using an E. faecalis OG1RF mariner transposon mutant (ntpJ-Tn). The ntpJ-Tn mutant showed delayed entry into mid-log phase growth and biofilm formation under standard and alkaline-adjusted conditions relative to the wild-type strain, while adherence …

Interactions And Community Structure Of Fungi And Prokaryotes In Salt And Brackish Marsh Ecosystems, Madeleine A. Thompso, Xuefeng Peng

Faculty Publications

Microbial communities play a fundamental role in biogeochemical cycling within salt and brackish marsh ecosystems, yet fungal-prokaryotic interactions in these environments remain poorly understood. This study employed metabarcoding of the 16S and 28S rRNA genes to investigate prokaryotic and fungal communities across four locations in sediments and surface waters of the North Inlet salt marsh and Winyah Bay brackish marsh (South Carolina, USA) over four time points from 2020 to 2021. Co-occurrence network analyses were used to identify potential microbial interactions and their ecological implications. Distinct fungal and prokaryotic communities were observed between the two marsh types. From the 16S …

Fuel Adulteration Detection Using Open-Ended Coaxial Line And Circular Waveguide Techniques, Abdulrahman Alofi, Ahmed Shamseldin, Sharif Iqbal M. Sheikh, Hussein Attia

Faculty Publications

Fuel adulteration, the practice of blending lower-quality substances like kerosene with gasoline, poses significant challenges for ensuring fuel quality and safety. This study investigates two electromagnetic-based methods for detecting such adulteration: the open-ended coaxial line method and the circular waveguide method. The results reveal that the open-ended coaxial line technique is particularly effective in detecting kerosene contamination, identifying levels as low as 10% by measuring changes in the dielectric constant of the gasoline-kerosene mixture. Operating in the frequency range of 0.25–1.25 GHz, this method captures subtle changes in permittivity. In contrast, the circular waveguide method evaluates contamination by monitoring shifts …

University Students’ Condom Use During The Covid-19 Pandemic: Cross-Cultural Differences And What Predict Them, Liam Dacosta, James S. Morandini, Rebecca T. Pinkus, Elien De Caluwé, Lik Sam Chan, Olivine Lo, Saowanee Thongnopakun, Sawitree Visanuyothin, Cheryl Harasymchuk, Samantha Joel, Helen C. Harton, Alyssa Mccoy, Victoria Dale, David L. Rodrigues, Judit Takács, Alexandra Sipos, Veronica M. Lamarche, Racidon Bernarte, Viktorija Čepukienė, Ivana M. Jakšić, Bojana Bodroža, Huỳnh Hồng Mai, Tran Thi Hong, Grace Akello, Ivana Hromatko, Asha Ganesan, Jiawei Zhang, Damian Murray, James Moran, Juan Ramón Barrada, Ángel Castro, Claudia Navarro-Roldan, Kuan-Pin Su, Jane Chang, Matthew B. Ruby, Donya Ziadlou, Shin Nakamine, Yutaka Watanabe, Albert Lee, Richelle-Joy Chia, Ilan Dar-Nimrod

Faculty Publications

Humans instinctively adopt methods to reduce their risk of encountering harmful pathogens, yet their adherence to preventive health practices can often be erratic. Condoms exemplify one vital preventive tool against sexually transmitted infections (STIs) that, despite their effectiveness, are not consistently utilized. This pattern of behavior appears to persist even during periods of widespread disease transmission, with varied data from the COVID-19 pandemic indicating that condom usage remained inconsistent. The present study aimed to clarify these inconsistencies by examining changes in condom use cross-culturally. Heterosexual participants who were sexually active (N = 3,972 [1,327 men, 2,645 women], Mage= 22.82) across …

Owning Workplace Safety: Investigating Safety Locus Of Control Among Nurses, Archana Manapragada Tedone, Jessica Mesmer-Magnus, Julie J. Lanz, Chockalingam Viswesvaran

Faculty Publications

Workplace accidents and injuries continue to be a challenge in high-risk industries such as healthcare, where safety is a daily critical concern. Although organizational factors such as safety climate have been well-established as predictors of safety-related outcomes, less is known about the role of individual differences in workplace safety. This research investigates safety locus of control, which captures an employee’s tendency to believe that their safety-oriented behaviors actually play a role in preventing safety incidents. Individuals with a highly internal safety locus of control tend to recognize the importance of their own and others’ safety actions for promoting workplace safety …

Everyday Norms Have Become More Permissive Over Time And Vary Across Cultures, Kimmo Eriksson, Pontus Strimling, Irina Vartanova, Brent Simpson, Minna Persson, Khalid Ahmed Abdi, Neta Ad, Alisher Aldashev, Habib Mohammad Ali, Maurizio Alì, Khatai Aliyev, Yasser M. Alrefaee, Alberth Estuardo Alvarado Ortiz, Per A. Andersson, Giulia Andrighetto, Gizem Arikan, John Jamir Aruta, Christian Lutete Ayikwa, Jonatan Baños-Chaparro, Davide Barrera, Justina Barsyte, Birzhan Batkeyev, Azma Batool, Elizaveta Berezina, Stéphanie Ngandu Bimina, Marie Björnstjerna, Sheyla Blumen

Faculty Publications

Every social situation that people encounter in their daily lives comes with a set of unwritten rules about what behavior is considered appropriate or inappropriate. These everyday norms can vary across societies: some societies may have more permissive norms in general or for certain behaviors, or for certain behaviors in specific situations. In a preregistered survey of 25,422 participants across 90 societies, we map societal differences in 150 everyday norms and show that they can be explained by how societies prioritize individualizing moral foundations such as care and liberty versus binding moral foundations such as purity. Specifically, societies with more …

U-Shaped Relationship Between White Blood Cell Counts And Incident Hypertension In Military Young Adults: The Chief Study, 2014–2020, Kun-Zhe Tsai, Chia-Wei Hong, Yun-Chen Chang, Wei-Chun Huang, Xuemei Sui, Carl J. Lavie, Gen-Min Lin

Faculty Publications

Background

Systemic low-grade inflammation, which is characterized by increased counts of blood leukocytes (white blood cells, WBCs), can lead to hypertension, while reduced WBC counts caused by the use of some substances, e.g., alcohol, can also lead to hypertension. However, there have been no studies on the association between WBC counts and the risk of hypertension in young adults.

Methods

This cohort study conducted in Taiwan included a total of 2351 military personnel who were aged 18–39 years, were free of baseline hypertension and were followed up for incident hypertension from 2014 to the end of 2020. Resting blood pressure …

Cannabis Improves Metabolic Dysfunction And Macrophage Signatures In Obese Mice, Brandon N. Vanderveen, Thomas D. Cardaci, Christian A. Unger, Mitchell M. Nesmith, Jeffrey C. Freeman, Arianna V. Bastian, Kasie Roark, Mansi Upadhyay, Andrew G. Levy, Brooke M. Bullard, Sierra J. Mcdonald, Kandy T. Velázquez, Reilly T. Enos, Jason L. Kubinak, Lorne J. Hofseth Ph.D., James Hébert Scd, Daping Fan, E. Angela Murphy

Faculty Publications

Obesity rates continue to rise, highlighting the need for new treatments that are effective, safe, and widely accessible. Aligned with the easing of restrictions on cannabis use, interest in its therapeutic potential is evolving. As such, we examined the effects of the cannabis plant with high cannabidiol (CBD) content or high Δ9-tetrahydrocannabinol (THC) content on metabolic and immune dysregulation in obese mice. Briefly, female C57BL/6 mice were randomized into four groups (n = 15/group): 1) lean, 2) obese placebo, 3) obese CBD, and 4) obese THC. Lean mice consumed a low-fat diet for the study …

Supporting Faculty Parents In Professional Development: Case Studies, Recommendations, And A Call For Inclusive Approaches, Anne Marie Gruber, Lindsay Doukopoulos

Faculty Publications

Educational development is often scheduled during academic breaks with the intent of allowing faculty participation; however, this can actually make it more difficult for faculty who are in parenting roles, particularly during summer and school breaks when childcare options are limited. This article provides case studies from two different institutions describing approaches to offering childcare support to faculty participants in professional development. Ultimately, although both cases were successful, they were limited solutions to what is actually a much larger cultural problem. Our discussion shares lessons learned, recommendations, and urges others to embrace inclusive and equity-focused endeavors in supporting faculty caregivers' …

Stories Of Racism And Resistance: A Narrative Analysis Of Stories Told In The Uk Windrush Generation And Descendants Of The Windrush Generation, Jessica Blumsom, Jacqui Scott, Emma Karwatzki, Aishath Nasheeda, David Hernandez-Saca, Alyson Malach, Glenda Andrew

Faculty Publications

The Windrush Generation (WG) and their descendants continue to experience adversity in the UK, including racism and the Windrush Scandal, with such adversities absent from psychological research literature. Intergenerational trauma is a psychological concept explaining that adverse experiences can be transmitted from one generation to impact subsequent generations. There has been limited consideration of the ongoing impact of adverse experiences that span multiple generations, such as experiences of racism within Western Europe. This paper utilised a narrative research design to study the narratives of members of the WG and those of their descendants in the UK. Eight expert by experience …

Attribution As Architecture In The Digital Age, Laura A. Heymann

Faculty Publications

As technology changes, one thing remains constant: human creators seem to care about attribution, whether as creators or as audience members. Current U.S. law lacks the means for many creators to effectively address attributional interests, and experience has shown that top-down, imposed technological solutions can fail to gain the necessary buy-in and adoption. The best approach, examples suggest, is for platforms to think of attribution as part of the architecture of their systems, but to take their cues from user-developed, individualized solutions, which will not only be more responsive to user interests but also allow adaptation as interests change and …

The Expanded Regulatory Significance Of Saharan Dust Plumes In The United States, Paul Miller, Kimberly Hamilton-Wims, Ken Holmes, Doug Melancon, Jason Meyers, Tegan Treadaway

Faculty Publications

Given the recent reduction in the U.S. National Ambient Air Quality Standard (NAAQS) for annual PM2.5from 12 to 9 μg m^–3, the contribution of exceptional, though natural, particulate transport events has assumed greater regulatory relevance. This study examines the evolution of a June 2022 trans-Atlantic Saharan dust outbreak and contextualizes its impact on the 2023 PM2.5design values (DVs) for continental U.S. air quality monitors. The results demonstrate that the intrusion of Saharan dust yielded mean 24 h PM2.5values > 35 μg m^–3for multiple days across the Central U.S. and single-handedly elevated the 2022 mean annual PM2.5by > 0.5 …

Fostering Belonging Through Library Descriptions, Nicole Lewis, Sharolyn Swenson, Katie Yeo, Karen Glenn

Faculty Publications

In late 2023, the BYU Library adopted its Inclusive Metadata Policy as part of its commitment to fostering a campus culture of belonging. This policy reflects the Statement on Belonging, which affirms that we “value and embrace the variety of individual characteristics, life experiences and circumstances, perspectives, talents, and gifts of each member of the community and the richness and strength they bring to our community.”[1] Catalogers and archival processors at the library are engaging in practices of cultural humility to ensure that the language and frameworks we use to describe people, communities, and histories are inclusive and respectful. …

Examining The Effects Of Firearm Lethality And Aggressors’ Intentions To Kill On Injurious Firearm Violence At American Schools: A Research Note, Brent R. Klein, Cory Schnell, Steven M. Chermak, Joshua D. Freilich

Faculty Publications

This study examined firearm lethality and aggressors’ lethal intent on injurious fatal and nonfatal school shootings using data from The American School Shooting Study, which covers 329 school shootings in the United States from 1990 to 2016. We developed a new multidimensional construct for measuring shooters’ determination to kill and examined firearm characteristics while considering confounding factors. We identified 11 distinct categories of shooters’ intent, with most showing a strong desire to kill. Both intent and weapon lethality significantly impacted school shooting homicides. Overall, we recommend that prevention and theoretical models should address both factors.

Physical Function And Pain As Predictors Of Movement Behaviors In Adults With Arthritis, Scott Jamieson, Sarah Wilcox Phd, Chih-Hsiang Yang Ph.D., Ye Sil Kim Phd, Christine Pellegrini Ph.D.

Faculty Publications

Purpose

Design

Setting

Subjects

Measures

Analysis …

Magnetic Nanoparticles Tethered With Zn–Dpa For The Removal Of Bacteria From Red Blood Cell Suspension, Tochukwu P. Okonkwo, Rajendra P. Gautam, Jacob B. Limburg, Breckin L. Forstrom, Bowen J. Houser, Aaron Rappleyea, Tyler P. Green, Joseph P. Talley, Alexander D. Daum, Stacey J. Smith, Karine Chesnel, William G. Pitt, Roger G. Harrison

Faculty Publications

Bacterial infections continue to drive the need for more effective and rapid methods for bacterial analysis. To address this, magnetic nanoparticles (MNPs) have emerged as promising tools, especially when their surfaces are modified with bacteria binders. The bis-zinc–dipicolylamine (Zn–DPA) complex is known for its broad affinity to bacteria. We have synthesized MNPs via a thermal decomposition method, encapsulated them in silica, modified their surface with Zn–DPA, and tested their ability to remove bacteria. The MNPs retain their superparamagnetic properties and crystallite structure after being encapsulated. The MNPs coated with silica and Zn–DPA effectively bind and remove both Gram-positive and Gram-negative …

Root Exudates: The Rhizospheric Frontier For Advancing Sustainable Plant Protection, Muhammad Rahil Afzal, Misbah Naz, Youbo Yu, Lisha Yan, Peiyi Wang, Janaki Mohotti, Gefei Hao, Jing-Jiang Zhou, Zhou Chen, Libo Zhang, Qian Wang

Faculty Publications

Root exudates (REs), a diverse array of bioactive metabolites secreted by plant roots in response to environmental stimuli, serve as key mediators of rhizosphere ecology and plant defense responses, offering a promising avenue for sustainable pest management and eco-friendly plant protection. While earlier reviews primarily focus on root exudates in the context of general rhizosphere dynamics and plant-microbial interactions, critical knowledge gaps persist in REs-plant-pest tripartite interactions, the mechanistic basis of REs-mediated plant defense, and their practical integration with integrated pest management (IPM) frameworks. This review provides a synthesis of the latest literature on the biochemical diversity and functions of …

Exact And Approximate Conformal Inference For Multi-Output Regression, Chancellor Johnstone, Eugene Ndiaye

Faculty Publications

It is common in machine learning to estimate a response y given covariate information x . However, these predictions alone do not quantify any uncertainty associated with said predictions. One way to overcome this deficiency is with conformal inference methods, which construct a set containing the unobserved response with a prescribed probability. Unfortunately, even with a one-dimensional response, conformal inference is computationally expensive despite recent encouraging advances. In this paper, we explore multi-output regression, delivering exact derivations of conformal inference p-values when the predictive model can be described as a linear function of y . Additionally, we introduce a multivariate …

Tort Liability For Failure To Age Gate: A Promising Regulatory Response To Digital Public Health Hazards, Matthew B. Lawrence, Brett Frischmann, Avi Sholkoff

Faculty Publications

Tort liability for failure to “age gate” is a promising legal response to the public health hazards of AI, social media, sports gambling, and other digital spaces. Tort liability for failure to “age gate” hinges liability for harms to minors on an app’s failure to take reasonable steps to prevent minors from gaining access or otherwise to apply appropriate governance rules, such as privacy-protective default settings or ensuring genuine parental consent. While no one legal response is a panacea, tort liability for failure to age gate carries several distinctive advantages that make it a particularly promising option at this stage …

“I Feel Like A Lot Of Times Women Are The Ones Who Are Problem-Solving For All The People That They Know”: The Gendered Impacts Of The Pandemic On Women In Alaska, Marya Rozanova-Smith, Andrey N. Petrov

Faculty Publications

The impacts of the COVID-19 pandemic and post-pandemic recovery in urban communities in the Arctic have been substantial, but their gendered aspects remain largely unknown. The goal of this study was to enhance the understanding of the gender-based impact on women in the urban areas of Alaska by exploring strengths and constraints to resilience in the social and economic domains of gender equality during and in the aftermath of the COVID-19 pandemic. Drawing on grounded theory methodology, this study is based on 29 in-depth, semi-structured interviews. The study methodology utilized a conceptual framework that integrated deficit-based and strength-based analytical perspectives. …