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Ideas And Perspectives: The Same Carbon Behaves Like Different Elements - An Insight Into Position-Specific Isotope Distributions, Yuyang He, Xiaobin Cao, Huiming Bao Oct 2020

Ideas And Perspectives: The Same Carbon Behaves Like Different Elements - An Insight Into Position-Specific Isotope Distributions, Yuyang He, Xiaobin Cao, Huiming Bao

Faculty Publications

It is expected that information on the source, reaction pathway, and reaction kinetics of an organic compound can be obtained from its position-specific isotope compositions or intramolecular isotope distribution (Intra-ID). To retrieve the information, we could use its predicted equilibrium Intra-ID as a reference for understanding the observed Intra-IDs. Historically, observed, apparently close-to-equilibrium carbon Intra-ID has prompted an open debate on the nature of biosystems and specifically the pervasiveness of reversible biochemical reactions. Much of the debate remains unresolved, and the discussion has not clearly distinguished between two states of equilibrium: (1) the equilibrium among the corresponding bond-breaking and bond-forming …

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Superconducting Phase Transition In Inhomogeneous Chains Of Superconducting Islands, Eduard Ilin, Irina Burkova, Xiangyu Song, Michael V. Pak, Dmitri S. Golubev, Alexey Bezryadin Oct 2020

Superconducting Phase Transition In Inhomogeneous Chains Of Superconducting Islands, Eduard Ilin, Irina Burkova, Xiangyu Song, Michael V. Pak, Dmitri S. Golubev, Alexey Bezryadin

Faculty Publications

We study one-dimensional chains of superconducting islands with a particular emphasis on the regime in which every second island is switched into its normal state, thus forming a superconductor-insulator-normal metal (S-I-N) repetition pattern. As is known since Giaever tunneling experiments, tunneling charge transport between a superconductor and a normal metal becomes exponentially suppressed, and zero-bias resistance diverges, as the temperature is reduced and the energy gap of the superconductor grows larger than the thermal energy. Here we demonstrate that this physical phenomenon strongly impacts transport properties of inhomogeneous superconductors made of weakly coupled islands with fluctuating values of the critical …

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Short-Term Intersection Traffic Flow Forecasting, Wenrui Qu, Jinhong Li, Lu Yang, Delin Li, Shasha Liu, Qun Zhao, Yi Qi Oct 2020

Short-Term Intersection Traffic Flow Forecasting, Wenrui Qu, Jinhong Li, Lu Yang, Delin Li, Shasha Liu, Qun Zhao, Yi Qi

Faculty Publications

The intersection is a bottleneck in an urban roadway network. As traffic demand increases, there is a growing congestion problem at urban intersections. Short-term traffic flow forecasting is crucial for advanced trip planning and traffic management. However, there are only a handful of existing models for forecasting intersection traffic flow. In addition, previous short-term traffic flow forecasting models usually were for predicting roadway conditions in a very short period, such as one minute or five minutes, which is often too late given that a driver may well be approaching the bottleneck already. Being able to accurately predict traffic congestions in …

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The Dynamic Trophic Niche Of An Island Bird Of Prey, Ulises Balza, Nicolas A. Lois, Michael J. Polito, Klemens Puetz, Amira Saalom, Andrea Raya Rey Oct 2020

The Dynamic Trophic Niche Of An Island Bird Of Prey, Ulises Balza, Nicolas A. Lois, Michael J. Polito, Klemens Puetz, Amira Saalom, Andrea Raya Rey

Faculty Publications

Optimal foraging theory predicts an inverse relationship between the availability of preferred prey and niche width in animals. Moreover, when individuals within a population have identical prey preferences and preferred prey is scarce, a nested pattern of trophic niche is expected if opportunistic and selective individuals can be identified. Here, we examined intraspecific variation in the trophic niche of a resident population of striated caracara (Phalcoboenus australis) on Isla de los Estados (Staten Island), Argentina, using pellet and stable isotope analyses. While this raptor specializes on seabird prey, we assessed this population's potential to forage on terrestrial prey, especially invasive …

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Fish Assemblages Associated With Artificial Reefs Assessed Using Multiple Gear Types In The Northwest Gulf Of Mexico, Jeffrey D. Plumlee, Kaylan M. Dance, Michael A. Dance, Hay R. Rooker, Thomas C. Tinhan, J. Brooke Shipley, R. J. David Wells Oct 2020

Fish Assemblages Associated With Artificial Reefs Assessed Using Multiple Gear Types In The Northwest Gulf Of Mexico, Jeffrey D. Plumlee, Kaylan M. Dance, Michael A. Dance, Hay R. Rooker, Thomas C. Tinhan, J. Brooke Shipley, R. J. David Wells

Faculty Publications

Quantitative surveys of fishes associated with artificial reefs in the northwest Gulf of Mexico were conducted over a 4-yr period (2014-2017). Artificial reefs surveyed were comprised of three types: concrete structures, rig jackets, and decommissioned ships. All reefs were surveyed using vertical long line ( VLL), fish traps, and Adaptive Resolution Imaging Sonar (ARIS 1800). Mean fish abundance did not significantly differ using VLL [1.7 ind set(-1) (SD 2.2)] among the three reef types. However, relative abundance among all fishes collected was significantly highest on rig reefs using traps [6.2 ind soak(-1) (SD 3.8)], while results from sonar surveys indicated …

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Tidal And Storm Impacts On Hydrodynamics And Sediment Dynamics In An Energetic Ebb Tidal Delta, Kehui Xu, P. Ansley Wren, Yanxia Ma Oct 2020

Tidal And Storm Impacts On Hydrodynamics And Sediment Dynamics In An Energetic Ebb Tidal Delta, Kehui Xu, P. Ansley Wren, Yanxia Ma

Faculty Publications

Bottom-mounted instrumentation was deployed at two sites on a large sandy shoal of an ebb tidal delta offshore of the Port Royal Sound of South Carolina of USA to collect hydrodynamics and sediment dynamics data. One site ("borrow site") was 2 km offshore in a dredge pit for nearby beach nourishment and the other site ("reference site") was 10 km offshore. In situ time-series data were collected during two periods after the dredging: 15 March-12 June (spring) and 18 August-18 November (fall) of 2012. Data at the reference site indicated active migrating bedforms from centimeters to decimeters tall, and sediment …

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Multimodal Representation Learning And Set Attention For Lwir In-Scene Atmospheric Compensation, Nicholas M. Westing, Kevin C. Gross, Brett J. Borghetti, Christine M. Schubert Kabban, Jacob Martin, Joseph Meola Oct 2020

Multimodal Representation Learning And Set Attention For Lwir In-Scene Atmospheric Compensation, Nicholas M. Westing, Kevin C. Gross, Brett J. Borghetti, Christine M. Schubert Kabban, Jacob Martin, Joseph Meola

Faculty Publications

A multimodal generative modeling approach combined with permutation-invariant set attention is investigated in this paper to support long-wave infrared (LWIR) in-scene atmospheric compensation. The generative model can produce realistic atmospheric state vectors (T;H2O;O3) and their corresponding transmittance, upwelling radiance, and downwelling radiance (TUD) vectors by sampling a low-dimensional space. Variational loss, LWIR radiative transfer loss and atmospheric state loss constrain the low-dimensional space, resulting in lower reconstruction error compared to standard mean-squared error approaches. A permutation-invariant network predicts the generative model low-dimensional components from in-scene data, allowing for simultaneous estimates of the atmospheric state and TUD …

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All-Atomic Molecular Dynamic Studies Of Human And Drosophila Cdk8: Insights Into Their Kinase Domains, The Lxxll Motifs, And Drug Binding Site, Wu Xu, Xiao-Jun Xie, Ali K. Faust, Mengmeng Liu, Xiao Li, Feng Chen, Ashlin A. Naquin, Avery C. Walton, Peter W. Kishbaugh, Jun-Yuan Ji Oct 2020

All-Atomic Molecular Dynamic Studies Of Human And Drosophila Cdk8: Insights Into Their Kinase Domains, The Lxxll Motifs, And Drug Binding Site, Wu Xu, Xiao-Jun Xie, Ali K. Faust, Mengmeng Liu, Xiao Li, Feng Chen, Ashlin A. Naquin, Avery C. Walton, Peter W. Kishbaugh, Jun-Yuan Ji

Faculty Publications

Cyclin-dependent kinase 8 (CDK8) and its regulatory partner Cyclin C (CycC) play conserved roles in modulating RNA polymerase II (Pol II)-dependent gene expression. To understand the structure and function relations of CDK8, we analyzed the structures of human and Drosophila CDK8 proteins using molecular dynamics simulations, combined with functional analyses in Drosophila. Specifically, we evaluated the structural differences between hCDK8 and dCDK8 to predict the effects of the LXXLL motif mutation (AQKAA), the P154L mutations, and drug binding on local structures of the CDK8 proteins. First, we have observed that both the LXXLL motif and the kinase activity of CDK8 …

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A Predictive Analytics Approach To Building A Decision Support System For Improving Graduation Rates At A Four-Year College, Xuan Wang, Helmut Schneider, Kenneth R. Walsh Oct 2020

A Predictive Analytics Approach To Building A Decision Support System For Improving Graduation Rates At A Four-Year College, Xuan Wang, Helmut Schneider, Kenneth R. Walsh

Faculty Publications

Although graduation rates have interested stakeholders, educational researchers, and policymakers for some time, little progress has been made on the overall graduation rate at four-year state colleges. Even though selective admission based on academic indicators such as high school GPA and ACT/ SAT have widely been used in the USA for years, and recent statistics show that less than 40% of students graduate from four-year state colleges in four years in the US. The authors propose using an ensemble of analytic models that considers cost as a better form of analysis that can be used as input to decision support …

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Third-Variable Effect Analysis With Multilevel Additive Models, Qingzhao Yu, Bin Li Oct 2020

Third-Variable Effect Analysis With Multilevel Additive Models, Qingzhao Yu, Bin Li

Faculty Publications

Third-variable effect refers to the effect transmitted by third-variables that intervene in the relationship between an exposure and a response variable. Third-variable effect analysis has been broadly studied in many fields. However, it remains a challenge for researchers to differentiate indirect effect of individual factor from multiple third-variables, especially when the involving variables are of hierarchical structure. Yu et al. (2014) defined third-variable effects that were consistent for all different types of response (categorical or continuous), exposure, or third-variables. With these definitions, multiple third-variables can be considered simultaneously, and the indirect effects carried by individual third-variables can be separated from …

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Environmentally Clean Access To Antarctic Subglacial Aquatic Environments, Alexander B. Michaud, Trista (Vick-Majors, Amanda M. Achberger, Mark L. Skidmore, Brent C. Christner, Martyn Tranter, John C. Priscu Oct 2020

Environmentally Clean Access To Antarctic Subglacial Aquatic Environments, Alexander B. Michaud, Trista (Vick-Majors, Amanda M. Achberger, Mark L. Skidmore, Brent C. Christner, Martyn Tranter, John C. Priscu

Faculty Publications

Subglacial Antarctic aquatic environments are important targets for scientific exploration due to the unique ecosystems they support and their sediments containing palaeoenvironmental records. Directly accessing these environments while preventing forward contamination and demonstrating that it has not been introduced is logistically challenging. The Whillans Ice Stream Subglacial Access Research Drilling (WISSARD) project designed, tested and implemented a microbiologically and chemically clean method of hot-water drilling that was subsequently used to access subglacial aquatic environments. We report microbiological and biogeochemical data collected from the drilling system and underlying water columns during sub-ice explorations beneath the McMurdo and Ross ice shelves and …

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A General Superapproximation Result, Susanne C. Brenner Oct 2020

A General Superapproximation Result, Susanne C. Brenner

Faculty Publications

A general superapproximation result is derived in this paper which is useful for the local/interior error analysis of finite element methods.

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Emergent Symplectic Symmetry In Atomic Nuclei: Ab Initio Symmetry-Adapted No-Core Shell Model, Kristina D. Launey, Tomáš Dytrych, Grigor H. Sargsyan, Robert B. Baker, Jerry P. Draayer Oct 2020

Emergent Symplectic Symmetry In Atomic Nuclei: Ab Initio Symmetry-Adapted No-Core Shell Model, Kristina D. Launey, Tomáš Dytrych, Grigor H. Sargsyan, Robert B. Baker, Jerry P. Draayer

Faculty Publications

Exact symmetry and symmetry-breaking phenomena play a key role in gaining a better understanding of the physics of many-particle systems, from quarks and atomic nuclei, through molecules and galaxies. In nuclei, exact and dominant symmetries such as rotational invariance, parity, and charge independence have been clearly established. Beyond such symmetries, the nature of nuclear dynamics appears to exhibit a high degree of complexity, and only now, we show the fundamental role of an emergent approximate symmetry in nuclei, the symplectic Sp(3,ℝ) symmetry, as clearly unveiled from ab initio studies that start from realistic interactions. In this article, we detail and …

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Exploring New And Modified Rejection-Type Thresholds Using Cricket Snack Crackers, Ryan Ardoin, Ross Romero, Brian Marx, Witoon Prinyawiwatkul Oct 2020

Exploring New And Modified Rejection-Type Thresholds Using Cricket Snack Crackers, Ryan Ardoin, Ross Romero, Brian Marx, Witoon Prinyawiwatkul

Faculty Publications

Recently, sensory threshold concepts have been expanded to include affective perceptions of foods and beverages, especially measures of product rejection; however, each threshold interpretation depends largely on the methodology employed. By substituting cricket powder for whole-wheat flour in snack crackers (0%, 5%, 10%, 15%, and 20%), we proposed modifications to two existing threshold methodologies: a modified consumer rejection threshold (M-CRT) using a 2-alternative choice (2-AC) preference test with “no preference” option; and a modified hedonic rejection threshold (M-HRT) based on less-than-neutral hedonic scores according to a one-sample t-test. We also proposed two new concepts: a rejection tolerance threshold (RTT) and …

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A Fully Quantum Calculation Of Broadening And Shifting Coefficients Of The D1 And D2 Spectral Lines Of Alkali-Metal Atoms Colliding With Noble-Gas Atoms, Robert D. Loper, David E. Weeks Oct 2020

A Fully Quantum Calculation Of Broadening And Shifting Coefficients Of The D1 And D2 Spectral Lines Of Alkali-Metal Atoms Colliding With Noble-Gas Atoms, Robert D. Loper, David E. Weeks

Faculty Publications

We use the Baranger model to compute collisional broadening and shift rates for the D1 and D2 spectral lines of M + Ng, where M = K, Rb, Cs and Ng = He, Ne, Ar. Scattering matrix elements are calculated using the channel packet method, and non-adiabatic wavepacket dynamics are determined using the split-operator method together with a unitary transformation between adiabatic and diabatic representations. Scattering phase shift differences are weighted thermally and are integrated over temperatures ranging from 100 K to 800 K. We find that predicted broadening rates compare well with experiment, but shift rates are …

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A Fictitious Points One-Step Mps-Mfs Technique, Xiaomin Zhu, Fangfang Dou, Andreas Karageorghis, C. S. Chen Oct 2020

A Fictitious Points One-Step Mps-Mfs Technique, Xiaomin Zhu, Fangfang Dou, Andreas Karageorghis, C. S. Chen

Faculty Publications

© 2020 The method of fundamental solutions (MFS) is a simple and efficient numerical technique for solving certain homogenous partial differential equations (PDEs) which can be extended to solving inhomogeneous equations through the method of particular solutions (MPS). In this paper, radial basis functions (RBFs) are considered as the basis functions for the construction of a particular solution of the inhomogeneous equation. A hybrid method coupling these two methods using both fundamental solutions and RBFs as basis functions has been effective for solving a large class of PDEs. In this paper, we propose an improved fictitious points method in which …

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Measuring The Resilience Of Criminogenic Ecosystems To Global Disruption: A Case-Study Of Covid-19 In China, Hervé Borrion, Justin Kurland, Nick Tilley, Peng Chen Oct 2020

Measuring The Resilience Of Criminogenic Ecosystems To Global Disruption: A Case-Study Of Covid-19 In China, Hervé Borrion, Justin Kurland, Nick Tilley, Peng Chen

Faculty Publications

Copyright: © 2020 Borrion et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. This paper uses resilience as a lens through which to analyse disasters and other major threats to patterns of criminal behaviour. A set of indicators and mathematical models are introduced that aim to quantitatively describe changes in crime levels in comparison to what could otherwise be expected, and what might be expected by way of adaptation and subsequent resumption of …

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Oil-Producing Metabolons Containing Dgat1 Use Separate Substrate Pools From Those Containing Dgat2 Or Pdat, Anushobha Regmi, Jay Shockey, Hari Kiran Kotapati, Philip D. Bates Oct 2020

Oil-Producing Metabolons Containing Dgat1 Use Separate Substrate Pools From Those Containing Dgat2 Or Pdat, Anushobha Regmi, Jay Shockey, Hari Kiran Kotapati, Philip D. Bates

Faculty Publications

© 2020 American Society of Plant Biologists. All rights reserved. Seed triacylglycerol (TAG) biosynthesis involves a metabolic network containing multiple different diacylglycerol (DAG) and acyl donor substrate pools. This network of pathways overlaps with those for essential membrane lipid synthesis and utilizes multiple different classes of TAG biosynthetic enzymes. Acyl flux through this network ultimately dictates the final oil fatty acid composition. Most strategies to alter seed oil composition involve the overexpression of lipid biosynthetic enzymes, but how these enzymes are assembled into metabolons and which substrate pools are used by each is still not well understood. To understand the …

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Geometric Analysis Of The Doppler Frequency For General Non-Stationary 3d Mobile-To-Mobile Channels Based On Prolate Spheroidal Coordinates, Michael Walter, Dmitriy Shutin, Martin Schmidhammer, David W. Matolak, Alenka Zajic Oct 2020

Geometric Analysis Of The Doppler Frequency For General Non-Stationary 3d Mobile-To-Mobile Channels Based On Prolate Spheroidal Coordinates, Michael Walter, Dmitriy Shutin, Martin Schmidhammer, David W. Matolak, Alenka Zajic

Faculty Publications

—Mobile-to-mobile channels often exhibit time-variant Doppler frequency shifts due to the movement of transmitter and receiver. An accurate description of the Doppler frequency turns out to be very difficult in Cartesian coordinates and any subsequent algebraic analysis of the Doppler frequency is intractable. In contrast to other approaches, we base our investigation on a geometric description of the Doppler frequency with the following three mathematical pillars: prolate spheroidal coordinate system, algebraic curve theory, and differential forms. The prolate spheroidal coordinate system is more appropriate to algebraically investigate the problem. After the transformation into the new coordinate system, the theory of …

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End-To-End Direct Digital Synthesis Simulation And Mathematical Model To Minimize Quantization Effects Of Digital Signal Generation, Pranav R. Patel, Richard K. Martin Oct 2020

End-To-End Direct Digital Synthesis Simulation And Mathematical Model To Minimize Quantization Effects Of Digital Signal Generation, Pranav R. Patel, Richard K. Martin

Faculty Publications

Direct digital synthesis (DDS) architectures are becoming more prevalent as modern digital-to-analog converter (DAC) and programmable logic devices evolve to support higher bandwidths. The DDS architecture provides the benefit of digital control but at a cost of generating spurious content in the spectrum. The generated spurious content may cause intermodulation distortion preventing proper demodulation of the received signal. The distortion may also interfere with the neighboring frequency bands. This article presents the various DDS architectures and explores the DDS architecture which provides the most digital reconfigurability with the lowest spurious content. End-to-end analytical equations, numerical and mathematical models are developed …

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Impacts Of Laboratory Vibrations And Laser Flicker Noise On Digital Holography, Douglas E. Thornton, Mark F. Spencer, Christopher A. Rice, Glen P. Perram Oct 2020

Impacts Of Laboratory Vibrations And Laser Flicker Noise On Digital Holography, Douglas E. Thornton, Mark F. Spencer, Christopher A. Rice, Glen P. Perram

Faculty Publications

In this paper, we experimentally demonstrate the impacts of laboratory vibrations and laser flicker noise on digital holography (DH). Specifically, we measure both the vibration efficiency and the coherence efficiency of our DH system at various focal-plane array integration times and path-length differences between the signal and reference. These efficiencies, in practice, contribute to the overall mixing efficiency, which is a measure for how well the detected signal and reference interfere. The results show that when the integration time is ≤1ms, the laboratory vibrations are negligible with a vibration efficiency of 100%; however, when the integration time equals 100 ms, …

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Engineering And Application Of A Biosensor With Focused Ligand Specificity, Dennis Della Corte, Hugo L. Van Beek, Falk Syberg, Marcus Schallmey, Felix Tobola, Kai U. Cormann, Christine Schlicker, Philipp T. Baumann, Karin Krumbach, Sascha Sokolowsky, Connor J. Morris, Alexander Grünberger Sep 2020

Engineering And Application Of A Biosensor With Focused Ligand Specificity, Dennis Della Corte, Hugo L. Van Beek, Falk Syberg, Marcus Schallmey, Felix Tobola, Kai U. Cormann, Christine Schlicker, Philipp T. Baumann, Karin Krumbach, Sascha Sokolowsky, Connor J. Morris, Alexander Grünberger

Faculty Publications

Cell factories converting bio-based precursors to chemicals present an attractive avenue to a sustainable economy, yet screening of genetically diverse strain libraries to identify the best-performing whole-cell biocatalysts is a low-throughput endeavor. For this reason, transcriptional biosensors attract attention as they allow the screening of vast libraries when used in combination with fluorescence-activated cell sorting (FACS). However, broad ligand specificity of transcriptional regulators (TRs) often prohibits the development of such ultra-high-throughput screens. Here, we solve the structure of the TR LysG of Corynebacterium glutamicum, which detects all three basic amino acids. Based on this information, we follow a semi-rational engineering …

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Real-Time Time-Dependent Electronic Structure Theory, Xiaosong Li, Niranjan Govind, Christine Isborn, A. Eugene Deprince, Kenneth Lopata Sep 2020

Real-Time Time-Dependent Electronic Structure Theory, Xiaosong Li, Niranjan Govind, Christine Isborn, A. Eugene Deprince, Kenneth Lopata

Faculty Publications

Copyright © 2020 American Chemical Society. Real-time electronic structure methods provide an unprecedented view of electron dynamics and ultrafast spectroscopy on the atto- and femtosecond time scale with vast potential to yield new insights into the electronic behavior of molecules and materials. In this Review, we discuss the fundamental theory underlying various real-time electronic structure methods as well as advantages and disadvantages of each. We give an overview of the numerical techniques that are widely used for real-time propagation of the quantum electron dynamics with an emphasis on Gaussian basis set methods. We also showcase many of the chemical applications …

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Quantum Backaction Cancellation In The Audio Band, Jonathan Cripe, Torrey Cullen, Yanbei Chen, Paula Heu, David Follman, Garrett D. Cole, Thomas Corbitt Sep 2020

Quantum Backaction Cancellation In The Audio Band, Jonathan Cripe, Torrey Cullen, Yanbei Chen, Paula Heu, David Follman, Garrett D. Cole, Thomas Corbitt

Faculty Publications

We report on the cancellation of quantum backaction noise in an optomechanical cavity. We perform measurements of the displacement of the microresonator, one in reflection of the cavity and one in transmission of the cavity. We show that measuring the amplitude quadrature of the light transmitted by the optomechanical cavity allows us to cancel the backaction noise between 2 and 50 kHz as a consequence of the strong optical spring present in the detuned cavity. This cancellation yields a more sensitive measurement of the microresonator's position with a 2 dB increase in sensitivity. To confirm that the backaction is eliminated, …

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Top Hadrons In Lorentz-Violating Field Theory, Brett David Altschul Sep 2020

Top Hadrons In Lorentz-Violating Field Theory, Brett David Altschul

Faculty Publications

If there is Lorentz symmetry violation in the t quark sector of the standard model, changes to particles’ dispersion relations might allow for the existence of stable top-flavored hadrons. Observations of the survival of high-energy γ-rays over astrophysical distances can be used to place constraints on Lorentz violation coefficients in the t sector at ∼10−4–10−6 levels of precision.

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Stoichiometrically Coupled Carbon And Nitrogen Cycling In The Microbial-Mineral Carbon Stabilization Model Version 1.0 (Mimics-Cn V1.0), Emily Kyker-Snowman, William R. Wieder, Serita D. Frey, A. Stuart Grandy Sep 2020

Stoichiometrically Coupled Carbon And Nitrogen Cycling In The Microbial-Mineral Carbon Stabilization Model Version 1.0 (Mimics-Cn V1.0), Emily Kyker-Snowman, William R. Wieder, Serita D. Frey, A. Stuart Grandy

Faculty Publications

Explicit consideration of microbial physiology in soil biogeochemical models that represent coupled carbon–nitrogen dynamics presents opportunities to deepen understanding of ecosystem responses to environmental change. The MIcrobial-MIneral Carbon Stabilization (MIMICS) model explicitly represents microbial physiology and physicochemical stabilization of soil carbon (C) on regional and global scales. Here we present a new version of MIMICS with coupled C and nitrogen (N) cycling through litter, microbial, and soil organic matter (SOM) pools. The model was parameterized and validated against C and N data from the Long-Term Inter-site Decomposition Experiment Team (LIDET; six litter types, 10 years of observations, and 13 sites …

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Effect Of Oxidation Level On The Interfacial Water At The Graphene Oxide-Water Interface: From Spectroscopic Signatures To Hydrogen-Bonding Environment, Rolf David, Aashish Tuladhar, Le Zhang, Christopher Arges, Revati Kumar Sep 2020

Effect Of Oxidation Level On The Interfacial Water At The Graphene Oxide-Water Interface: From Spectroscopic Signatures To Hydrogen-Bonding Environment, Rolf David, Aashish Tuladhar, Le Zhang, Christopher Arges, Revati Kumar

Faculty Publications

The interfacial region of the graphene oxide (GO)-water system is nonhomogenous due to the presence of two distinct domains: an oxygen-rich surface and a graphene-like region. The experimental vibrational sum-frequency generation (vSFG) spectra are distinctly different for the fully oxidized GO-water interface as compared to the reduced GO-water case. Computational investigations using ab initio molecular dynamics were performed to determine the molecular origins of the different spectroscopic features. The simulations were first validated by comparing the simulated vSFG spectra to those from the experiment, and the contributions to the spectra from different hydrogen bonding environments and interfacial water orientations were …

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The Impact Of The Madden–Julian Oscillation On Cyclone Amphan (2020) And Southwest Monsoon Onset, Heather L. Roman-Stork, Subrahmanyam Bulusu Sep 2020

The Impact Of The Madden–Julian Oscillation On Cyclone Amphan (2020) And Southwest Monsoon Onset, Heather L. Roman-Stork, Subrahmanyam Bulusu

Faculty Publications

Cyclone Amphan was an exceptionally strong tropical cyclone in the Bay of Bengal that achieved a minimum central pressure of 907 mb during its active period in May 2020. In this study, we analyzed the oceanic and surface atmospheric conditions leading up to cyclogenesis, the impact of this storm on the Bay of Bengal, and how the processes that led to cyclogenesis, such as the Madden–Julian Oscillation (MJO) and Amphan itself, in turn impacted southwest monsoon preconditioning and onset. To accomplish this, we took a multiparameter approach using a combination of near real time satellite observations, ocean model forecasts, and …

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Magma Reservoir Formation And Evolution At A Slow-Spreading Center (Atlantis Bank, Southwest Indian Ridge), Marine Boulanger, Lydéric France, Jeremy R.L. Deans, Carlotta Ferrando, C. Johan Lissenberg, Anette Von Der Handt Sep 2020

Magma Reservoir Formation And Evolution At A Slow-Spreading Center (Atlantis Bank, Southwest Indian Ridge), Marine Boulanger, Lydéric France, Jeremy R.L. Deans, Carlotta Ferrando, C. Johan Lissenberg, Anette Von Der Handt

Faculty Publications

© Copyright © 2020 Boulanger, France, Deans, Ferrando, Lissenberg and von der Handt. Several ODP-IODP expeditions drilled oceanic core complexes interpreted as exhumed portions of lower crust close to the ridge axis, and provide the community with invaluable sampling opportunity for further constraining magmatic processes involved in the formation of the slow-spreading lower oceanic crust. ODP Hole 735B presents the most primitive lithologies sampled at Atlantis Bank oceanic core complex (Southwest Indian Ridge) in a ∼250 m thick section that was previously interpreted as a single crustal intrusion. We combined detailed structural and petrographic constraints with whole rock and in …

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Machine Intelligence For Nerve Conduit Design And Production, Caleb E. Stewart, Chin Fung Kelvin Kan, Brody R. Stewart, Henry W. Sanicola Iii, Jangwook P. Jung, Olawale A. R. Sulaiman, Dadong Wang Sep 2020

Machine Intelligence For Nerve Conduit Design And Production, Caleb E. Stewart, Chin Fung Kelvin Kan, Brody R. Stewart, Henry W. Sanicola Iii, Jangwook P. Jung, Olawale A. R. Sulaiman, Dadong Wang

Faculty Publications

Nerve guidance conduits (NGCs) have emerged from recent advances within tissue engineering as a promising alternative to autografts for peripheral nerve repair. NGCs are tubular structures with engineered biomaterials, which guide axonal regeneration from the injured proximal nerve to the distal stump. NGC design can synergistically combine multiple properties to enhance proliferation of stem and neuronal cells, improve nerve migration, attenuate inflammation and reduce scar tissue formation. The aim of most laboratories fabricating NGCs is the development of an automated process that incorporates patient-specific features and complex tissue blueprints (e.g. neurovascular conduit) that serve as the basis for more complicated …

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