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Building Resilience To Extreme Weather And Climate Events In The Rural Water And Wastewater Sectors, Nathan P. Kettle, Sarah F. Trainor, Renee Edwards, Donald Antrobus, Curt Baranowski, Tina Buxbaum, Kevin Berry, Michael Brubaker, Kristine L. De Long, Steve Fries, Davin Holen, Barry Keim, Danielle Meeker, Harry Penn, Cheryl Rosa, Rick Thoman, John Walsh, Jian Zhang Dec 2023

Building Resilience To Extreme Weather And Climate Events In The Rural Water And Wastewater Sectors, Nathan P. Kettle, Sarah F. Trainor, Renee Edwards, Donald Antrobus, Curt Baranowski, Tina Buxbaum, Kevin Berry, Michael Brubaker, Kristine L. De Long, Steve Fries, Davin Holen, Barry Keim, Danielle Meeker, Harry Penn, Cheryl Rosa, Rick Thoman, John Walsh, Jian Zhang

Faculty Publications

Extreme weather and climate events pose significant risks to rural water and wastewater systems. We examine the vulnerability of the water sector to weather and climate extremes in rural, predominantly Indigenous and underserved coastal areas and analyze how networks support resilience. Drawing on the analysis of 39 web-based questionnaire responses and 19 interviews with rural water and wastewater managers and service providers in southern Louisiana and western Alaska, this article reports a range of interrelated historical, environmental, and social factors that influence vulnerability to extreme weather events. Formal and informal social networks serve multiple roles in building resilience. These roles …


Global Dataset Of Soil Organic Carbon In Tidal Marshes, Tania L. Maxwell, André S. Rovai, Maria Fernanda Adame, Janine B. Adams, José Álvarez-Rogel, William E.N. Austin, Kim Beasy, Francesco Boscutti, Michael E. Böttcher, Tjeerd J. Bouma, Richard H. Bulmer, Annette Burden, Shannon A. Burke, Saritta Camacho, Doongar R. Chaudhary, Gail L. Chmura, Margareth Copertino, Grace M. Cott, Christopher Craft, John Day, Carmen B. De Los Santos, Lionel Denis, Weixin Ding, Joanna C. Ellison, Carolyn J. Ewers Lewis, Luise Giani, Maria Gispert, Swanne Gontharet, José A. González-Pérez, M. Nazaret González-Alcaraz, Connor Gorham, Anna Elizabeth L. Graversen, Anthony Grey Dec 2023

Global Dataset Of Soil Organic Carbon In Tidal Marshes, Tania L. Maxwell, André S. Rovai, Maria Fernanda Adame, Janine B. Adams, José Álvarez-Rogel, William E.N. Austin, Kim Beasy, Francesco Boscutti, Michael E. Böttcher, Tjeerd J. Bouma, Richard H. Bulmer, Annette Burden, Shannon A. Burke, Saritta Camacho, Doongar R. Chaudhary, Gail L. Chmura, Margareth Copertino, Grace M. Cott, Christopher Craft, John Day, Carmen B. De Los Santos, Lionel Denis, Weixin Ding, Joanna C. Ellison, Carolyn J. Ewers Lewis, Luise Giani, Maria Gispert, Swanne Gontharet, José A. González-Pérez, M. Nazaret González-Alcaraz, Connor Gorham, Anna Elizabeth L. Graversen, Anthony Grey

Faculty Publications

Tidal marshes store large amounts of organic carbon in their soils. Field data quantifying soil organic carbon (SOC) stocks provide an important resource for researchers, natural resource managers, and policy-makers working towards the protection, restoration, and valuation of these ecosystems. We collated a global dataset of tidal marsh soil organic carbon (MarSOC) from 99 studies that includes location, soil depth, site name, dry bulk density, SOC, and/or soil organic matter (SOM). The MarSOC dataset includes 17,454 data points from 2,329 unique locations, and 29 countries. We generated a general transfer function for the conversion of SOM to SOC. Using this …


Deep Learning For Enhanced Free-Space Optical Communications, M. P. Bart, N. J. Savino, P. Regmi, L. Cohen, H. Safavi, H. C. Shaw, S. Lohani, T. A. Searles, B. T. Kirby, H. Lee, R. T. Glasser Dec 2023

Deep Learning For Enhanced Free-Space Optical Communications, M. P. Bart, N. J. Savino, P. Regmi, L. Cohen, H. Safavi, H. C. Shaw, S. Lohani, T. A. Searles, B. T. Kirby, H. Lee, R. T. Glasser

Faculty Publications

Atmospheric effects, such as turbulence and background thermal noise, inhibit the propagation of light used in ON-OFF keying (OOK) free-space optical (FSO) communication. Here we present and experimentally validate a convolutional neural network (CNN) to reduce the bit error rate of FSO communication in post-processing that is significantly simpler and cheaper than existing solutions based on advanced optics. Our approach consists of two neural networks, the first determining the presence of bit sequences in thermal noise and turbulence and the second demodulating the bit sequences. All data used for training and testing our network is obtained experimentally by generating OOK …


Mid-Miocene Sea Level Altitude Of The Qaidam Basin, Northern Tibetan Plateau, Yuanyuan Sun, Yu Liang, Hu Liu, Jun Liu, Junliang Ji, Xue Ke, Xiaobo Liu, Yuxin He, Huanye Wang, Bin Zhang, Yongsu Zhang, Guangsheng Zhuang, Junling Pei, Yongxiang Li, Cheng Quan, Jianxing Li, Jonathan C. Aitchison, Weiguo Liu, Zhonghui Liu Dec 2023

Mid-Miocene Sea Level Altitude Of The Qaidam Basin, Northern Tibetan Plateau, Yuanyuan Sun, Yu Liang, Hu Liu, Jun Liu, Junliang Ji, Xue Ke, Xiaobo Liu, Yuxin He, Huanye Wang, Bin Zhang, Yongsu Zhang, Guangsheng Zhuang, Junling Pei, Yongxiang Li, Cheng Quan, Jianxing Li, Jonathan C. Aitchison, Weiguo Liu, Zhonghui Liu

Faculty Publications

A detailed uplift history of the Tibetan Plateau is essential for disentangling the proposed geodynamical models and assessing its impacts on climate and biodiversity. However, when and how the plateau formed remains highly controversial. Here, we present unusual geochemical indicators of marine signatures in the Cenozoic terrestrial strata of the Qaidam Basin, northern Tibetan Plateau, with strong implications for the basin altitude. Our investigations across the basin reveal typical marine alkenones and anomalously high carbonate carbon isotopic values during the mid-Miocene, but not at earlier stages, which are accompanied by a divergent trend in the paired carbonate oxygen and leaf …


Digital Archives: How Western Newspapers Frame Our Remembrance Of The Gezi Park Protest, Nihar Sreepada, Ahmet Aksoy Dec 2023

Digital Archives: How Western Newspapers Frame Our Remembrance Of The Gezi Park Protest, Nihar Sreepada, Ahmet Aksoy

Faculty Publications

We analyze the coverage of the Gezi Park protests by two major Western newspapers - The New York Times and The Guardian - through the lens of media framing, rhetoric, and collective memory. We argue that these digital archives frame Turkey's Gezi Park protests as a challenge to an authoritarian government by promoting the themes of unrest as a conflict of ideologies, oppression of citizens, and the park as a site of memory. In a concluding section, we focus on the significance of digital archives as repositories of collective memory and the role of media framing in shaping these reconstructions …


Examining Consumers’ Perceptions Of And Attitudes Toward Digital Fashion In General And Purchase Intention Of Luxury Brands’ Digital Fashion Specifically, Yanbo Zhang, Chuanlan Liu, Yanru Lyu Dec 2023

Examining Consumers’ Perceptions Of And Attitudes Toward Digital Fashion In General And Purchase Intention Of Luxury Brands’ Digital Fashion Specifically, Yanbo Zhang, Chuanlan Liu, Yanru Lyu

Faculty Publications

Digital fashion may instill transformative power into the fashion industry as it can simultaneously deliver fashionability and sustainability. Renowned for their innovativeness and creativity, luxury brands embrace digital fashion and achieve market success, indicating the future of digital fashion. This research aims to empirically investigate consumers’ general perceptions and evaluations of digital fashion and to specifically examine consumers’ purchase intention of luxury brands’ digital fashion. A total of 214 responses were collected from a U.S.-based research company’s consumer panel. Data were analyzed by using structural equation modeling (SEM). The results revealed that the general attitude toward digital fashion is influenced …


Morphodynamic Modeling Of Fourleague Bay In Mississippi River Delta: Sediment Fluxes Across River-Estuary-Wetland Boundaries, Nan Wang, Qin Chen, Kelin Hu, Kehui Xu, Samuel J. Bentley, Jiaze Wang Dec 2023

Morphodynamic Modeling Of Fourleague Bay In Mississippi River Delta: Sediment Fluxes Across River-Estuary-Wetland Boundaries, Nan Wang, Qin Chen, Kelin Hu, Kehui Xu, Samuel J. Bentley, Jiaze Wang

Faculty Publications

To mitigate land losses in the Mississippi River Delta, sediment diversions are being employed to enable the flow of river water and sediments into wetlands experiencing degradation. A two-dimensional coupled flow-wave Delft3D model was used in this study to explore the hydrodynamics and sediment transport in Fourleague Bay (FLB), Louisiana, USA, which has been considered an analog site for studying the efficiency of sediment diversion projects. In-situ measurements of sediment accretion and hydrodynamic characteristics from 2015 to 2016 were utilized to calibrate and validate the morphodynamic model. The validated model was then applied to quantify sediment transport in FLB and …


Sediment Delivery To Sustain The Ganges-Brahmaputra Delta Under Climate Change And Anthropogenic Impacts, Jessica L. Raff, Steven L. Goodbred, Jennifer L. Pickering, Ryan S. Sincavage, John C. Ayers, Md Saddam Hossain, Carol A. Wilson, Chris Paola, Michael S. Steckler, Dhiman R. Mondal, Jean Louis Grimaud, Celine Jo Grall, Kimberly G. Rogers, Kazi Matin Ahmed, Syed Humayun Akhter, Brandee N. Carlson, Elizabeth L. Chamberlain, Meagan Dejter, Jonathan M. Gilligan, Richard P. Hale, Mahfuzur R. Khan, Md Golam Muktadir, Md Munsur Rahman, Lauren A. Williams Dec 2023

Sediment Delivery To Sustain The Ganges-Brahmaputra Delta Under Climate Change And Anthropogenic Impacts, Jessica L. Raff, Steven L. Goodbred, Jennifer L. Pickering, Ryan S. Sincavage, John C. Ayers, Md Saddam Hossain, Carol A. Wilson, Chris Paola, Michael S. Steckler, Dhiman R. Mondal, Jean Louis Grimaud, Celine Jo Grall, Kimberly G. Rogers, Kazi Matin Ahmed, Syed Humayun Akhter, Brandee N. Carlson, Elizabeth L. Chamberlain, Meagan Dejter, Jonathan M. Gilligan, Richard P. Hale, Mahfuzur R. Khan, Md Golam Muktadir, Md Munsur Rahman, Lauren A. Williams

Faculty Publications

The principal nature-based solution for offsetting relative sea-level rise in the Ganges-Brahmaputra delta is the unabated delivery, dispersal, and deposition of the rivers’ ~1 billion-tonne annual sediment load. Recent hydrological transport modeling suggests that strengthening monsoon precipitation in the 21st century could increase this sediment delivery 34-60%; yet other studies demonstrate that sediment could decline 15-80% if planned dams and river diversions are fully implemented. We validate these modeled ranges by developing a comprehensive field-based sediment budget that quantifies the supply of Ganges-Brahmaputra river sediment under varying Holocene climate conditions. Our data reveal natural responses in sediment supply comparable to …


What The Book Of First Enoch And The Aramaic Dead Sea Scrolls Reveal About The History Of The Qumran Community, Kenneth Atkinson Dec 2023

What The Book Of First Enoch And The Aramaic Dead Sea Scrolls Reveal About The History Of The Qumran Community, Kenneth Atkinson

Faculty Publications

The Aramaic book commonly known as First Enoch is among the most important of all the compositions found in the Dead Sea Scrolls. The fragments of this pseudepigraphal work and related documents provide new information about the use and growth of the Enochic traditions, as well as how their contents influenced the community that collected and placed the Dead Sea Scrolls in the caves in the vicinity of Khirbet Qumran. Research on the Enochic literature in this corpus of documents is important for Jewish studies and for understanding the history of Christianity since the New Testament cites from and alludes …


Remote Testing Of Adult Neurogenic Tests: Implications And Recommendations For Speech-Language Pathologists, Angela Burda, Carrie Axt, Samantha Balk, Zoe Bleile, Madilyn Fahey, Paul Kort Freeman, Heather Hogelucht, Paeten Schultz, Kamryn Shaffer, Kara Wright Dec 2023

Remote Testing Of Adult Neurogenic Tests: Implications And Recommendations For Speech-Language Pathologists, Angela Burda, Carrie Axt, Samantha Balk, Zoe Bleile, Madilyn Fahey, Paul Kort Freeman, Heather Hogelucht, Paeten Schultz, Kamryn Shaffer, Kara Wright

Faculty Publications

Purpose: One purpose of this preliminary case report was to document the challenges that can arise when giving adult neurogenic tests via telepractice. Another purpose was to develop recommendations on adaptations that can be made when speech-language pathologists give the tests employed in this report. Though one test was adapted by its authors to be given remotely, the other two tests have little or no published adaptations regarding remote administration. Methods: A 33 year old female and a 51 year old male, both of whom have acquired neurogenic communicative disorders, were given the Apraxia Battery for Adults-2nd edition, the Ross …


A Critical Systematic Literature Review Of Global Inclusive Education Using An Affective, Intersectional, Discursive, Emotive And Material Lens, David Isaac Hernández-Saca, Catherine Kramarczuk Voulgarides, Susan Larson Etscheidt Dec 2023

A Critical Systematic Literature Review Of Global Inclusive Education Using An Affective, Intersectional, Discursive, Emotive And Material Lens, David Isaac Hernández-Saca, Catherine Kramarczuk Voulgarides, Susan Larson Etscheidt

Faculty Publications

We conducted a critical systematic literature review on global inclusive education and law. The critical review questions were: (1) how have scholars theorized, conceptualized, and studied global inclusive education? (2) How do scholars define global inclusive education? (3) And what do scholars cite as prominent international inclusive education law? We ask such questions given the ongoing global crises that situate historically marginalized groups in even more precarious positions—including students with dis/Abilities. Given this framing, we employed a critical systematic literature review that is cognizant of our positionalities, writing from the Global North, so that we can identify lines of inquiry …


Sentencing In An Era Of Plea Bargains, Jeffrey Bellin, Jenia I. Turner Dec 2023

Sentencing In An Era Of Plea Bargains, Jeffrey Bellin, Jenia I. Turner

Faculty Publications

The literature offers inconsistent answers to a question that is foundational to criminal law: Who imposes sentences? Traditional narratives place sentencing responsibility in the hands of the judge. Yet, in a country where 95% of criminal convictions come from guilty pleas (not trials), modern American scholars center prosecutors—who control plea terms—as the deciders of punishment. This Article highlights and seeks to resolve the tension between these conflicting narratives by charting the pathways by which sentences are determined in a system dominated by plea bargains.

After reviewing the empirical literature on sentence variation, examining state and federal plea-bargaining rules and doctrines, …


The Crisis Of Unrepresented Immigrants: Vastly Increasing The Number Of Accredited Representatives Offers The Best Hope For Resolving It, Michele R. Pistone Dec 2023

The Crisis Of Unrepresented Immigrants: Vastly Increasing The Number Of Accredited Representatives Offers The Best Hope For Resolving It, Michele R. Pistone

Faculty Publications

The U.S. immigration system is exceedingly complex, and access to legal representation is the primary determinant in obtaining a just immigration outcome. Immigrants must navigate a byzantine, burdensome, and high-stakes legal process, conducted in a language they often do not speak. They often must do so without any legal representation. Unlike criminal defendants, immigrants are not entitled to government-funded lawyers. Legal services organizations, such as Legal Services Corporation, that receive any federal funding are prohibited from providing legal representation to most immigrants. Faith-based and charitable legal services organizations provide some legal representation to immigrants through attorneys, staff members, and volunteer …


Do Contributing Files Provide Information About Oss Newcomers' Onboarding Barriers?, Felipe Fronchetti, David C. Shepherd, Igor Wiese, Christoph Treude, Marco Aurélio Gerosa, Igor Steinmacher Nov 2023

Do Contributing Files Provide Information About Oss Newcomers' Onboarding Barriers?, Felipe Fronchetti, David C. Shepherd, Igor Wiese, Christoph Treude, Marco Aurélio Gerosa, Igor Steinmacher

Faculty Publications

Effectively onboarding newcomers is essential for the success of open source projects. These projects often provide onboarding guidelines in their 'CONTRIBUTING' files (e.g., CONTRIBUTING.md on GitHub). These files explain, for example, how to find open tasks, implement solutions, and submit code for review. However, these files often do not follow a standard structure, can be too large, and miss barriers commonly found by newcomers. In this paper, we propose an automated approach to parse these CONTRIBUTING files and assess how they address onboarding barriers. We manually classified a sample of files according to a model of onboarding barriers from the …


Light-Driven And Nutrient-Driven Displacements Of Subsurface Chlorophyll Maximum Depth In Subtropical Gyres, Xiaogang Xing, Peng Xiu, Edward A. Laws, Guo Yang, Xin Liu, Fei Chai Nov 2023

Light-Driven And Nutrient-Driven Displacements Of Subsurface Chlorophyll Maximum Depth In Subtropical Gyres, Xiaogang Xing, Peng Xiu, Edward A. Laws, Guo Yang, Xin Liu, Fei Chai

Faculty Publications

The mechanism that determines the dynamics of subsurface chlorophyll maximum depth (zSCM) has long been debated. Although a coupling between zSCM and the top of nitracline (znit) has been widely observed in the open ocean, a co-location of zSCM and an isolume depth (ziso) has often been reported in oligotrophic waters. In this study, based on continuous observations of ten BGC-Argo floats, we found that the seasonal displacement of zSCM in all subtropical gyres was driven mainly by light, but zSCM displayed a nutrient-driven pattern occasionally when znit became shallower than ziso. We therefore proposed a “two-group competition framework”: zSCM …


Equation-Based And Data-Driven Modeling: Open-Source Software Current State And Future Directions, Lagrande Gunnell, Bethany Nicholson, John Hedengren Nov 2023

Equation-Based And Data-Driven Modeling: Open-Source Software Current State And Future Directions, Lagrande Gunnell, Bethany Nicholson, John Hedengren

Faculty Publications

A review of current trends in scientific computing reveals a broad shift to open-source and higher-level programming languages such as Python and growing career opportunities over the next decade. Open-source modeling tools accelerate innovation in equation-based and data-driven applications. Significant resources have been deployed to develop data-driven tools (PyTorch, TensorFlow, Scikit-learn) from tech companies that rely on machine learning services to meet business needs while keeping the foundational tools open. Open-source equation-based tools such as Pyomo, CasADi, Gekko, and JuMP are also gaining momentum according to user community and development pace metrics. Integration of data-driven and principles-based tools is emerging. …


On Determining The Equation Of A Salkowski Curve Satisfying Tau/Kappa=1/S, Yun Myung Oh, Devin Garcia-Roblero Nov 2023

On Determining The Equation Of A Salkowski Curve Satisfying Tau/Kappa=1/S, Yun Myung Oh, Devin Garcia-Roblero

Faculty Publications

In this paper, we determine the equation of a Salkowski curve whose ratio of torsion to curvature is given by 1/s, where s is the arc length of the curve. The Frenet-Serret equations provide the third-order vector differential equation for the unit tangent vector T(s) and the general (series) solution was obtained. In the end, the series solution is entirely determined by the given initial conditions.


5- And 10-Oxocorroles From Β-Octaalkylcorroles, Lorena Di Zazzo, Sara Nardis, Fabrizio Caroleo, Francesco Pizzoli, Frank R. Fronczek, Kevin M. Smith, Beatrice Berionni Berna, Roberto Paolesse Nov 2023

5- And 10-Oxocorroles From Β-Octaalkylcorroles, Lorena Di Zazzo, Sara Nardis, Fabrizio Caroleo, Francesco Pizzoli, Frank R. Fronczek, Kevin M. Smith, Beatrice Berionni Berna, Roberto Paolesse

Faculty Publications

The reaction of Zn ions with β-octaalkylcorroles leads to the air oxidation of the macrocycle, with the formation of a mixture of 5- and 10-oxocorroles. Spectroscopic characterization confirms the antiaromatic character of these macrocycles. A simple synthetic protocol opens the way for more detailed studies of oxocorrole chemistry.


Feasibility Of An Abstract Verb Naming Treatment For Aphasia, Dallin J. Bailey, Lisa Bunker, Julie L. Wambaugh Nov 2023

Feasibility Of An Abstract Verb Naming Treatment For Aphasia, Dallin J. Bailey, Lisa Bunker, Julie L. Wambaugh

Faculty Publications

Purpose

Verb production impairments in aphasia have important implications for sentence production and communication in general. Verbs with low concreteness may be especially important for certain functional uses, and yet limited data regarding their response to treatment are available. This study was designed to examine a novel behavioral treatment approach to improve low concreteness verb naming in persons with aphasia.

Method

Three persons with nonfluent aphasia participated in a single-subject experimental design research study examining the feasibility of the novel treatment. The treatment was based on approaches that target the verb as the central node of meaning during sentence construction. …


Evaluating Hpx And Kokkos On Risc-V Using An Astrophysics Application Octo-Tiger, Patrick Diehl, Gregor Daiss, Steven Brandt, Alireza Kheirkhahan, Hartmut Kaiser, Christopher Taylor, John Leidel Nov 2023

Evaluating Hpx And Kokkos On Risc-V Using An Astrophysics Application Octo-Tiger, Patrick Diehl, Gregor Daiss, Steven Brandt, Alireza Kheirkhahan, Hartmut Kaiser, Christopher Taylor, John Leidel

Faculty Publications

In recent years, computers based on the RISC-V architecture have raised broad interest in the high-performance computing (HPC) community. As the RISC-V community develops the core instruction set architecture (ISA) along with ISA extensions, the HPC community has been actively ensuring HPC applications and environments [10, 29] are supported. In this context, assessing the performance of asynchronous many-task runtime systems (AMT) is essential. In this paper, we describe our experience with porting of a full 3D adaptive mesh-refinement, multi-scale, multi-model, and multi-physics application, Octo-Tiger, that is based on the HPX AMT, and we explore its performance characteristics on different RISC-V …


The Future Of Cyanobacteria Toxicity In Estuaries Undergoing Pulsed Nutrient Inputs: A Case Study From Coastal Louisiana, Sibel Bargu, Matthew Hiatt, Kanchan Maiti, Paul Miller, John R. White Nov 2023

The Future Of Cyanobacteria Toxicity In Estuaries Undergoing Pulsed Nutrient Inputs: A Case Study From Coastal Louisiana, Sibel Bargu, Matthew Hiatt, Kanchan Maiti, Paul Miller, John R. White

Faculty Publications

Harmful cyanobacteria blooms (cyanoHABs) are a global phenomenon, especially in calm, warm, and nutrient-rich freshwater and estuarine systems. These blooms can produce various potent toxins responsible for animal poisoning and human health problems. Nutrient-rich freshwater pulsed into estuaries affects turbidity, water temperature, salinity, and nutrient concentrations and ratios at irregular intervals, creating a highly dynamic habitat. However, the underlying processes that lead to the selective development of cyanoHABs for certain species and the fate of their toxins are still uncertain. This paper draws upon the rich body of research available for one such system, the Lake Pontchartrain Estuary, Louisiana, to …


A Membrane Protein Of The Rice Pathogen Burkholderia Glumae Required For Oxalic Acid Secretion And Quorum Sensing, Asif Iqbal, George Nwokocha, Vijay Tiwari, Inderjit K. Barphagha, Anne Grove, Jong Hyun Ham, William T. Doerrler Nov 2023

A Membrane Protein Of The Rice Pathogen Burkholderia Glumae Required For Oxalic Acid Secretion And Quorum Sensing, Asif Iqbal, George Nwokocha, Vijay Tiwari, Inderjit K. Barphagha, Anne Grove, Jong Hyun Ham, William T. Doerrler

Faculty Publications

Bacterial panicle blight is caused by Burkholderia glumae and results in damage to rice crops worldwide. Virulence of B. glumae requires quorum sensing (QS)-dependent synthesis and export of toxoflavin, responsible for much of the damage to rice. The DedA family is a conserved membrane protein family found in all bacterial species. B. glumae possesses a member of the DedA family, named DbcA, which we previously showed is required for toxoflavin secretion and virulence in a rice model of infection. B. glumae secretes oxalic acid as a “common good” in a QS-dependent manner to combat toxic alkalinization of the growth medium …


Community-Wide Correlations Between Species Richness, Abundance And Population Genomic Diversity In A Freshwater Biodiversity Hotspot, Jamie R. Bucholz, Garrett W. Hopper, Irene Sánchez González, Taylor E. Kelley, Colin R. Jackson, Ryan C. Garrick, Carla L. Atkinson, Jeffrey D. Lozier Nov 2023

Community-Wide Correlations Between Species Richness, Abundance And Population Genomic Diversity In A Freshwater Biodiversity Hotspot, Jamie R. Bucholz, Garrett W. Hopper, Irene Sánchez González, Taylor E. Kelley, Colin R. Jackson, Ryan C. Garrick, Carla L. Atkinson, Jeffrey D. Lozier

Faculty Publications

Understanding patterns of diversity across macro (e.g. species-level) and micro (e.g. molecular-level) scales can shed light on community function and stability by elucidating the abiotic and biotic drivers of diversity within ecological communities. We examined the relationships among taxonomic and genetic metrics of diversity in freshwater mussels (Bivalvia: Unionidae), an ecologically important and species-rich group in the southeastern United States. Using quantitative community surveys and reduced-representation genome sequencing across 22 sites in seven rivers and two river basins, we surveyed 68 mussel species and sequenced 23 of these species to characterize intrapopulation genetic variation. We tested for the presence of …


Labeling Effects Of Initial Juvenile Justice System Processing Decision On Youth Interpersonal Ties*, Zachary R. Rowan, Adam Fine, Laurence Steinberg, Paul J. Frick, Elizabeth Cauffman Nov 2023

Labeling Effects Of Initial Juvenile Justice System Processing Decision On Youth Interpersonal Ties*, Zachary R. Rowan, Adam Fine, Laurence Steinberg, Paul J. Frick, Elizabeth Cauffman

Faculty Publications

The juvenile justice system can process youth in myriad ways. Youth who are formally processed, relative to being informally processed, may experience more public and harsh sanctions that label youth more negatively as “deviant.” Drawing on labeling theory, the current study evaluates the relative effect of formal justice system processing on the interpersonal dynamics of youth peer networks. Using data from the Crossroads Study, a multisite longitudinal sample of first-time adolescent offenders, the current study applies augmented inverse probability weighting and generalized mixed-effects models to estimate the effects of formal processing on friendship selection processes of homophily and withdrawal and …


Expanding Non-Invasive Approaches For Fish-Health Monitoring: A Survey Of The Epidermal Mucous Metabolomes Of Phylogenetically Diverse Freshwater Fish Species, Drew R. Ekman, Marina G. Evich, Jonathan D. Mosley, Jon A. Doering, Kellie A. Fay, Gerald T. Ankley, Timothy W. Collette Nov 2023

Expanding Non-Invasive Approaches For Fish-Health Monitoring: A Survey Of The Epidermal Mucous Metabolomes Of Phylogenetically Diverse Freshwater Fish Species, Drew R. Ekman, Marina G. Evich, Jonathan D. Mosley, Jon A. Doering, Kellie A. Fay, Gerald T. Ankley, Timothy W. Collette

Faculty Publications

There is a pressing need for more-holistic approaches to fisheries assessments along with growing demand to reduce the health impacts of sample collections. Metabolomic tools enable the use of sample matrices that can be collected with minimal impact on the organism (e.g., blood, urine, and mucus) and provide high-throughput, untargeted biochemical information without the requirement of a sequenced genome. These qualities make metabolomics ideal for monitoring a wide range of fish species, particularly those under protected status. In the current study, we surveyed the relative abundances of 120 endogenous metabolites in epidermal mucus across eight freshwater fish species belonging to …


Responses Of Phytoplankton Communities To The Effect Of Both River Plume And Coastal Upwelling, Zhuyin Tong, Lingqi Ma, Shujie Cai, Lei Wang, Wupeng Xiao, Bangqin Huang, Edward A. Laws Nov 2023

Responses Of Phytoplankton Communities To The Effect Of Both River Plume And Coastal Upwelling, Zhuyin Tong, Lingqi Ma, Shujie Cai, Lei Wang, Wupeng Xiao, Bangqin Huang, Edward A. Laws

Faculty Publications

River plumes and coastal upwelling systems are both nutrient-abundant habitats compared to the open ocean, and the mechanisms that structure the phytoplankton community when these occur together are unclear. In this study we investigated the dynamics and drivers of phytoplankton biomass and community composition in the Pearl River plume-coastal upwelling system on the northern South China Sea shelf during summer. We found that phytoplankton biomass was lower in the plume than in upwelled water. Diatoms were the only dominant group in the upwelled water. In contrast, diatoms and Synechococcus were co-dominant in the plume, and the negative correlation between the …


A Target Enrichment Probe Set For Resolving Phylogenetic Relationships In The Coffee Family, Rubiaceae, Laymon D. Ball, Ana M. Bedoya, Charlotte M. Taylor, Laura P. Lagomarsino Nov 2023

A Target Enrichment Probe Set For Resolving Phylogenetic Relationships In The Coffee Family, Rubiaceae, Laymon D. Ball, Ana M. Bedoya, Charlotte M. Taylor, Laura P. Lagomarsino

Faculty Publications

Premise: Rubiaceae is among the most species-rich plant families, as well as one of the most morphologically and geographically diverse. Currently available phylogenies have mostly relied on few genomic and plastid loci, as opposed to large-scale genomic data. Target enrichment provides the ability to generate sequence data for hundreds to thousands of phylogenetically informative, single-copy loci, which often leads to improved phylogenetic resolution at both shallow and deep taxonomic scales; however, a publicly accessible Rubiaceae-specific probe set that allows for comparable phylogenetic inference across clades is lacking. Methods: Here, we use publicly accessible genomic resources to identify putatively single-copy nuclear …


Synergistic In Vitro Antiviral Effect Of Combinations Of Ivermectin, Essential Oils, And 18-(Phthalimid-2-Yl)Ferruginol Against Arboviruses And Herpesvirus, Liliana Betancur-Galvis, Orlando José Jimenez-Jarava, Fatima Rivas, William E. Mendoza-Hernández, Miguel A. González-Cardenete Nov 2023

Synergistic In Vitro Antiviral Effect Of Combinations Of Ivermectin, Essential Oils, And 18-(Phthalimid-2-Yl)Ferruginol Against Arboviruses And Herpesvirus, Liliana Betancur-Galvis, Orlando José Jimenez-Jarava, Fatima Rivas, William E. Mendoza-Hernández, Miguel A. González-Cardenete

Faculty Publications

Combining antiviral drugs with different mechanisms of action can help prevent the development of resistance by attacking the infectious agent through multiple pathways. Additionally, by using faster and more economical screening methods, effective synergistic drug candidates can be rapidly identified, facilitating faster paths to clinical testing. In this work, a rapid method was standardized to identify possible synergisms from drug combinations. We analyzed the possible reduction in the antiviral effective concentration of drugs already approved by the FDA, such as ivermectin (IVM), ribavirin (RIBA), and acyclovir (ACV) against Zika virus (ZIKV), Chikungunya virus (CHIKV), and herpes virus type 2 (HHV-2). …


Looking Back To Look Forward: Exploring Crenshaw’S Political, Structural, And Representational Intersectionality In Sport, Allison Anders Ph.D., James M. Devita, Leslee A. Fisher, Chris Corr, Christina L. Myers Nov 2023

Looking Back To Look Forward: Exploring Crenshaw’S Political, Structural, And Representational Intersectionality In Sport, Allison Anders Ph.D., James M. Devita, Leslee A. Fisher, Chris Corr, Christina L. Myers

Faculty Publications

Engaging with Kimberlé Crenshaw’s concept of intersectionality, the authors (re)turn to its genesis in critical race theory (CRT) and specifically, its forms of structural intersectionality, political intersectionality, and representational intersectionality. Discussing each form in relation to contemporary issues in sport that Black women and women of Color navigate, they argue that Crenshaw’s intersectionality provides additional compelling layers of engagement with existing intersectional scholarship and scholarship about activism in sport, invites structural and discursive change through intersectional policies and practice, and promotes coalition building toward intersectional racial justice in sport.


Effect Of Sampling Method On Detection Of The Equine Uterine Microbiome During Estrus, B. A. Heil, M. Van Heule, S. K. Thompson, T. A. Kearns, E. L. Oberhaus, G. King, P. Daels, P. Dini, J. L. Sones Nov 2023

Effect Of Sampling Method On Detection Of The Equine Uterine Microbiome During Estrus, B. A. Heil, M. Van Heule, S. K. Thompson, T. A. Kearns, E. L. Oberhaus, G. King, P. Daels, P. Dini, J. L. Sones

Faculty Publications

Bacterial endometritis is among the most common causes of subfertility in mares. It has a major economic impact on the equine breeding industry. The sensitivity of detecting uterine microbes using culture-based methods, irrespective of the sample collection method, double-guarded endometrial swab, endometrial biopsy, or uterine low-volume lavage (LVL), is low. Therefore, equine bacterial endometritis often goes undiagnosed. Sixteen individual mares were enrolled, and an endometrial sample was obtained using each method from all mares. After trimming, quality control and decontamination, 3824 amplicon sequence variants were detected in the dataset. We found using 16S rRNA sequencing that the equine uterus harbors …