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Osseointegrated Transcutaneous Device For Amputees: A Pilot Large Animal Model, Brian T. Grisez, Andrew E. Hanselman, Karim W. Boukhemis, Trapper A.J. Lalli, Brock A. Lindsey Jan 2018

Osseointegrated Transcutaneous Device For Amputees: A Pilot Large Animal Model, Brian T. Grisez, Andrew E. Hanselman, Karim W. Boukhemis, Trapper A.J. Lalli, Brock A. Lindsey

Faculty & Staff Scholarship

Traditional above-the-knee amputation prosthetics utilize a stump-socket interface that is well-known for skin/socket problems, sitting difficulty, disuse osteopenia, and increased work of ambulation. As a result, we evaluated a novel osseointegrated transcutaneous implant in a large animal. The implant was designed to promote osseointegration at the bone-implant interface and minimize complications. As proof of concept, four Dorset sheep underwent a two-stage surgery for forelimb placement of an osseointegrated transcutaneous implant utilizing Compress�� technology (Biomet, Inc., Warsaw, IN). Two sheep received a long anchor plug (90 mm long x 9 mm in diameter) and two received a short anchor plug (46 …


Acute Posterior Multifocal Placoid Pigment Epitheliopathy Associated With Gastrointestinal Stromal Tumor And Hurthle Cell Tumor, Daniel D. Kim, Ghassan Ghorayeb Jan 2018

Acute Posterior Multifocal Placoid Pigment Epitheliopathy Associated With Gastrointestinal Stromal Tumor And Hurthle Cell Tumor, Daniel D. Kim, Ghassan Ghorayeb

Faculty & Staff Scholarship

Acute posterior multifocal placoid pigment epitheliopathy (APMPEE) is a chorioretinal inflammatory disease of unknown origin. Patients usually present with a rapid loss of central/paracentral vision over the course of a week in both eyes. The fundus exhibits rapid appearance of multiple deep subretinal yellow-white, flat lesions at the RPE/choriocapillaris level. This in turn causes changes of both the ellipsoid zone and RPE which can result in permanent central vision loss. The pathogenesis is controversial but is associated with a recent viral illness and can involve the central nervous system with concern for cerebral vasculitis. Rare reports of APMPEE associated with …


The Effect Of Proprotein Convertase Subtilisin/Kexin Type 9 Inhibitors On Nonfasting Remnant Cholesterol In A Real World Population, Anthony P. Morise, Jennifer Tennant, Sari D. Holmes, Danyel H. Tacker Jan 2018

The Effect Of Proprotein Convertase Subtilisin/Kexin Type 9 Inhibitors On Nonfasting Remnant Cholesterol In A Real World Population, Anthony P. Morise, Jennifer Tennant, Sari D. Holmes, Danyel H. Tacker

Faculty & Staff Scholarship

Background. Proprotein convertase subtilisin/kexin type 9 (PCSK9) inhibitors have demonstrated significant effects on low-density lipoprotein (LDL) cholesterol and nonhigh density lipoprotein (HDL) cholesterol. To date, there have been limited reports on the effect of PCSK9 inhibitors on remnant cholesterol. Objectives. Assess the effect of PCSK9 inhibitors on nonfasting remnant cholesterol in a real world population. Identify whether pretreatment triglyceride levels are associated with PCSK9 inhibition success as indicated by changes in remnant cholesterol levels. Methods. Patients in our adult lipid clinic (n = 109) receiving PCSK9 inhibition for atherosclerotic cardiovascular disease or familial hypercholesterolemia who had available pre- and post- …


Parametric Investigation Of Combustion And Heat Transfer Characteristics Of Oscillating Linear Engine Alternator, Mehar Bade, Nigel N. Clark, Matthew C. Robinson, Parviz Famouri Jan 2018

Parametric Investigation Of Combustion And Heat Transfer Characteristics Of Oscillating Linear Engine Alternator, Mehar Bade, Nigel N. Clark, Matthew C. Robinson, Parviz Famouri

Faculty & Staff Scholarship

An Oscillating Linear Engine Alternator (OLEA) has the potential to overcome the thermal, mechanical, and combustion inadequacies encountered by the conventional slider-crank engines. The linear engines convert the reciprocating piston motion into electricity, thereby eliminating needless crankshaft linkages and rotational motion. As the dead center positions are not explicitly identified unlike crankshaft engines, the linear engine exhibits different stroke and compression ratio every cycle and should manage the unfavorable events like misfire, rapid load changes, and overfueling without the energy storage of a flywheel. Further, the apparatus control and management strategy is difficult for OLEA when compared to conventional engines …


High Myopic Photorefractive Keratectomy Outcomes With The Alcon Wavelight® Ex500 Excimer Laser, Mark D. Mifflin, Brent S. Betts, Jason Nguyen, Severin Pouly Jan 2018

High Myopic Photorefractive Keratectomy Outcomes With The Alcon Wavelight® Ex500 Excimer Laser, Mark D. Mifflin, Brent S. Betts, Jason Nguyen, Severin Pouly

Faculty & Staff Scholarship

Purpose: To present refractive outcomes from consecutive cases with the Alcon Wavelight® EX500 excimer laser using photorefractive keratectomy (PRK) in patients with high myopia. Methods: A retrospective chart review of consecutive cases of high myopic eyes ($6.0 Diopters [D]) undergoing PRK with the Alcon Wavelight EX500 excimer laser (Alcon Labo- ratories, Fort Worth, TX, USA) was done. Moderately high myopic eyes (6.0 to ,8.0 D [6 D]) were compared with high myopic eyes (8.0 D or greater [8 D]). Outcomes measured included pre- and postoperative refractive error, uncorrected distance visual acuity (UDVA), corrected distance visual acuity, spherical equivalent correction (SEQ), …


Analysis Of Global And Local Stress Changes In A Longwall Gateroad, I.B. Tulu, G.S. Esterhuizen, D. Gearhart, T.M. Klemetti, K.M. Mohamed, D.W.H. Su Jan 2018

Analysis Of Global And Local Stress Changes In A Longwall Gateroad, I.B. Tulu, G.S. Esterhuizen, D. Gearhart, T.M. Klemetti, K.M. Mohamed, D.W.H. Su

Faculty & Staff Scholarship

A numerical-model-based approach was recently developed for estimating the changes in both the hor- izontal and vertical loading conditions induced by an approaching longwall face. In this approach, a sys- tematic procedure is used to estimate the model’s inputs. Shearing along the bedding planes is modeled with ubiquitous joint elements and interface elements. Coal is modeled with a newly developed coal mass model. The response of the gob is calibrated with back analysis of subsidence data and the results of previously published laboratory tests on rock fragments. The model results were verified with the sub- sidence and stress data recently …


Impact Of Universal Medical Insurance System On The Accessibility Of Medical Service Supply And Affordability Of Patients In China, Xiaolei Xiong, Zhiguo Zhang, Jing Ren, Jie Zhang, Xiaoyun Pan, Liang Zhang, Shiwei Gong, Si Jin Jan 2018

Impact Of Universal Medical Insurance System On The Accessibility Of Medical Service Supply And Affordability Of Patients In China, Xiaolei Xiong, Zhiguo Zhang, Jing Ren, Jie Zhang, Xiaoyun Pan, Liang Zhang, Shiwei Gong, Si Jin

Faculty & Staff Scholarship

Background

China’s universal medical insurance system (UMIS) is designed to promote social fairness through improving access to medical services and reducing out-of-pocket (OOP) costs for all Chinese. However, it is still not known whether UMIS has a significant impact on the accessibility of medical service supply and the affordability, as well as the seeking-care choice, of patients in China.

Methods

Segmented time-series regression analysis, as a powerful statistical method of interrupted time series design, was used to estimate the changes in the quantity and quality of medical service supply before and after the implementation of UMIS. The rates of catastrophic …


Validation Of A Dietary Screening Tool In A Middle-Aged Appalachian Population, Melissa Ventura Marra, Sowmyanarayanan V. Thuppal, Elizabeth J. Johnson, Regan L. Bailey Jan 2018

Validation Of A Dietary Screening Tool In A Middle-Aged Appalachian Population, Melissa Ventura Marra, Sowmyanarayanan V. Thuppal, Elizabeth J. Johnson, Regan L. Bailey

Faculty & Staff Scholarship

Proactive nutrition screening is an effective public health strategy for identifying and targeting individuals who could benefit from making dietary improvements for primary and secondary prevention of disease. The Dietary Screening Tool (DST) was developed and validated to assess nutritional risk among rural older adults. The purpose of this study was to evaluate the utility and validity of the DST to identify nutritional risk in middle-aged adults. This cross-sectional study in middle-aged adults (45–64 year olds, n = 87) who reside in Appalachia, examined nutritional status using an online health survey, biochemical measures, anthropometry, and three representative 24-h dietary recalls. …


Resting Hormone Alterations And Injuries: Block Vs. Dup Weight-Training Among D-1 Track And Field Athletes, Keith B. Painter, G Gregory Haff, N Travis Triplett, Chales Stuart, Guy Hornsby, Mike W. Ramsey, Caleb D. Bazyler, Michael H. Stone Jan 2018

Resting Hormone Alterations And Injuries: Block Vs. Dup Weight-Training Among D-1 Track And Field Athletes, Keith B. Painter, G Gregory Haff, N Travis Triplett, Chales Stuart, Guy Hornsby, Mike W. Ramsey, Caleb D. Bazyler, Michael H. Stone

Faculty & Staff Scholarship

Daily undulating periodization (DUP), using daily alterations in repetitions, has been advocated as a superior method of resistance training, while traditional forms of programming for periodization (Block) have been questioned. Nineteen Division I track and field athletes were assigned to either a 10-week Block or DUP training group. Year and event were controlled. Over the course of the study, there were four testing sessions, which were used to evaluate a variety of strength characteristics, including maximum isometric strength, rate of force development, and one repetition maximum (1RM). Although, performance trends favored the Block group for strength and rate of force …


Feature-Based And String-Based Models For Predicting Rna-Protein Interaction, Donald Adjeroh, Maen Allaga, Jun Tan, Jie Lin, Yue Jiang, Ahmed Abbasi, Xiaobo Zhou Jan 2018

Feature-Based And String-Based Models For Predicting Rna-Protein Interaction, Donald Adjeroh, Maen Allaga, Jun Tan, Jie Lin, Yue Jiang, Ahmed Abbasi, Xiaobo Zhou

Faculty & Staff Scholarship

In this work, we study two approaches for the problem of RNA-Protein Interaction (RPI). In the first approach, we use a feature-based technique by combining extracted features from both sequences and secondary structures. The feature-based approach enhanced the prediction accuracy as it included much more available information about the RNA-protein pairs. In the second approach, we apply search algorithms and data structures to extract effective string patterns for prediction of RPI, using both sequence information (protein and RNA sequences), and structure information (protein and RNA secondary structures). This led to different string-based models for predicting interacting RNA-protein pairs. We show …


Linking Importance–Performance Analysis, Satisfaction, And Loyalty: A Study Of Savannah, Ga, Jinyang Deng, Chad D. Pierskalla Jan 2018

Linking Importance–Performance Analysis, Satisfaction, And Loyalty: A Study Of Savannah, Ga, Jinyang Deng, Chad D. Pierskalla

Faculty & Staff Scholarship

Importance–performance analysis (IPA) has been widely used to examine the relationship between importance, performance, and overall satisfaction in tourism destinations. IPA implicitly assumes that attribute performance will have little impact on overall satisfaction when stated importance is low. However, this assumption is rarely tested. This study, for the first time, tested this assumption by including attributes in each IPA quadrant into a second-order structural equation model. Results indicate that attributes with lower ratings of importance in the “low priority” and “potential overkill” quadrants do not contribute to overall satisfaction, regardless of performance, while the opposite is true for attributes in …


Transcriptional Profiling Of Saccharomyces Cerevisiae Reveals The Impact Of Variation Of A Single Transcription Factor On Differential Gene Expression In 4nqo, Fermentable, And Nonfermentable Carbon Sources, Xiaoqing Rong-Mullins, Michael C. Ayers, Mahmoud Summers, Jennifer E.G. Gallagher Jan 2018

Transcriptional Profiling Of Saccharomyces Cerevisiae Reveals The Impact Of Variation Of A Single Transcription Factor On Differential Gene Expression In 4nqo, Fermentable, And Nonfermentable Carbon Sources, Xiaoqing Rong-Mullins, Michael C. Ayers, Mahmoud Summers, Jennifer E.G. Gallagher

Faculty & Staff Scholarship

Cellular metabolism can change the potency of a chemical’s tumorigenicity. 4-nitroquinoline-1-oxide (4NQO) is a tumorigenic drug widely used on animal models for cancer research. Polymorphisms of the transcription factor Yrr1 confer different levels of resistance to 4NQO in Saccharomyces cerevisiae. To study how different Yrr1 alleles regulate gene expression leading to resistance, transcriptomes of three isogenic S. cerevisiae strains carrying different Yrr1 alleles were profiled via RNA sequencing (RNA-Seq) and chromatin immunoprecipitation coupled with sequencing (ChIP-Seq) in the presence and absence of 4NQO. In response to 4NQO, all alleles of Yrr1 drove the expression of SNQ2 (a multidrug transporter), which …


Maternal Engineered Nanomaterial Inhalation During Gestation Alters The Fetal Transcriptome, P.A. Stapleton, Q.A. Hathaway, C.E. Nichols, A.B. Abukabda, M.V. Pinti, D.L. Shepherd, C.R. Mcbride, J. Yi, V.C. Castranova, J.M Hollander, Timothy Robert Nurkiewicz Jan 2018

Maternal Engineered Nanomaterial Inhalation During Gestation Alters The Fetal Transcriptome, P.A. Stapleton, Q.A. Hathaway, C.E. Nichols, A.B. Abukabda, M.V. Pinti, D.L. Shepherd, C.R. Mcbride, J. Yi, V.C. Castranova, J.M Hollander, Timothy Robert Nurkiewicz

Faculty & Staff Scholarship

Background: The integration of engineered nanomaterials (ENM) is well-established and widespread in clinical, commercial, and domestic applications. Cardiovascular dysfunctions have been reported in adult populations after exposure to a variety of ENM. As the diversity of these exposures continues to increase, the fetal ramifications of maternal exposures have yet to be determined. We, and others, have explored the consequences of ENM inhalation during gestation and identified many cardiovascular and metabolic outcomes in the F1 generation. The purpose of these studies was to identify genetic alterations in the F1 generation of Sprague-Dawley rats that result from maternal ENM inhalation during gestation. …


Macrophage Sensing Of Single- Walled Carbon Nanotubes Via Toll- Like Receptors, Sourav P. Mukherjee, Olesja Bondarenko, Pekka Kohonen, Fernando T. Andon, Tana Brzicova, Isabel Gessner, Sanjay Mathur, Massimo Bottini, Paolo Calligari, Lorenzo Stella, Elena Kisin, Anna Shvedova, Reija Autio, Heli Salminen-Mankonen, Ritta Lahesmaa, Bengt Fadeel Jan 2018

Macrophage Sensing Of Single- Walled Carbon Nanotubes Via Toll- Like Receptors, Sourav P. Mukherjee, Olesja Bondarenko, Pekka Kohonen, Fernando T. Andon, Tana Brzicova, Isabel Gessner, Sanjay Mathur, Massimo Bottini, Paolo Calligari, Lorenzo Stella, Elena Kisin, Anna Shvedova, Reija Autio, Heli Salminen-Mankonen, Ritta Lahesmaa, Bengt Fadeel

Faculty & Staff Scholarship

Carbon-based nanomaterials including carbon nanotubes (CNTs) have been shown to trigger

inflammation. However, how these materials are ‘sensed’ by immune cells is not known. Here we compared the effects of two carbon-based nanomaterials, single-walled CNTs (SWCNTs) and graphene oxide (GO), on primary human monocyte-derived macrophages. Genome-wide transcriptomics assessment was performed at sub-cytotoxic doses. Pathway analysis of the microarray data revealed pronounced effects on chemokine-encoding genes in macrophages exposed to SWCNTs, but not in response to GO, and these results were validated by multiplex array-based cytokine and chemokine profiling. Conditioned medium from SWCNT-exposed cells acted as a chemoattractant for dendritic cells. …


Absolute Lymphocyte And Neutrophil Counts In Neonatal Ischemic Brain Injury, Jessica M. Povroznik, Elizabeth B. Engler-Chiurazzi, Tania Nanavati, Paola Pergami Jan 2018

Absolute Lymphocyte And Neutrophil Counts In Neonatal Ischemic Brain Injury, Jessica M. Povroznik, Elizabeth B. Engler-Chiurazzi, Tania Nanavati, Paola Pergami

Faculty & Staff Scholarship

Objectives: This study aimed to identify differences in absolute neutrophils, lymphocytes, and neutrophil-to-lymphocyte ratio between neonates with two forms of ischemic brain injury, hypoxic-ischemic encephalopathy, and acute ischemic stroke, compared to controls. We also aimed to determine whether this neutrophil/lymphocyte response pattern is associated with disease severity or is a consequence of the effects of total-body cooling, an approved treatment for moderate-to-severe hypoxic-ischemic encephalopathy. Methods: A retrospective chart review of 101 neonates with hypoxic-ischemic encephalopathy + total-body cooling (n = 26), hypoxic-ischemic encephalopathy (n=12), acute ischemic stroke (n=15), and transient tachypnea of the newborn (n=48) was conducted; transient tachypnea of …


Palatine Tonsil Stenting Of The Airway As Determined By Drug-Induced Sleep Endoscopy, Habib G. Zalzal, Steven Coutras Jan 2018

Palatine Tonsil Stenting Of The Airway As Determined By Drug-Induced Sleep Endoscopy, Habib G. Zalzal, Steven Coutras

Faculty & Staff Scholarship

Objective. To demonstrate lateral pharyngeal wall collapse and increased apnea-hypopnea index in a child posttonsillectomy. Background. Some children have worsening of their sleep symptoms after tonsillectomy for obstructive sleep apnea. This case report demonstrates an open airway on drug-induced sleep endoscopy (DISE) in a child with tonsillar hypertrophy followed by more pronounced airway obstruction related to lateral pharyngeal wall collapse after tonsillectomy. Case Presentation. A 7-year- old boy presented with obstructive sleep apnea and underwent workup with DISE. Following adenotonsillectomy and subsequent lingual tonsillectomy with epiglottopexy, the patient’s sleep apnea symptoms and polysomnogram results worsened. Subsequent DISE showed a more …


Ex Vivo Evaluation Of Secretion-Clearing Device In Reducing Airway Resistance Within Endotracheal Tubes, Christopher Waters, R. Constance Wiener, Hamed M. Motlagh Jan 2018

Ex Vivo Evaluation Of Secretion-Clearing Device In Reducing Airway Resistance Within Endotracheal Tubes, Christopher Waters, R. Constance Wiener, Hamed M. Motlagh

Faculty & Staff Scholarship

Background. Secretions accumulate in endotracheal tubes’ (ETT) lumens upon their placement in patients. The secretions impact airway resistance and pressure. Secretions potentiate prolonged mechanical ventilation and ventilator-associated pneumonia. Our primary objective in this study was to evaluate an ETT-clearing device (ETT-CD) in its ability to remove secretions from ex vivo ETT lumens. Methods. Forty ETTs, obtained from intensive care patients at extubation, were individually placed into a ventilator field performance testing simulator at 37°C. The pressure drop through the ETTs was measured at a flow rate of 60 L/min before and after cleaning with the ETT-CD and compared with unused, …


Masculine Traits And Depressive Symptoms In Older And Younger Men And Women, Elizabeth C. Price, Jeffrey J. Gregg, Merideth D. Smith, Amy Fiske Jan 2018

Masculine Traits And Depressive Symptoms In Older And Younger Men And Women, Elizabeth C. Price, Jeffrey J. Gregg, Merideth D. Smith, Amy Fiske

Faculty & Staff Scholarship

Evidence suggests that men who strongly endorse masculine traits display an atypical presentation of depression, including more externalizing symptoms (e.g., anger or substance use), but fewer typical, internalizing symptoms (e.g., depressed mood or crying). This phenomenon has not been adequately explored in older adults or women. The current study used the externalizing subscale of the Masculine Depression Scale in older and younger men and women to detect atypical symptoms. It was predicted that individuals who more strongly endorsed masculine traits would have higher scores on the measure of externalizing symptoms relative to a measure of typical depressive symptoms Center for …


Anomalous Origin Of A Right Coronary Artery From Pulmonary Artery, Muhammad Shabbir Rawala, S. Tahira Shah Naqvi, Kinaan Farhan, Muhammad Yasin, Syed Bilal Rizvi Jan 2018

Anomalous Origin Of A Right Coronary Artery From Pulmonary Artery, Muhammad Shabbir Rawala, S. Tahira Shah Naqvi, Kinaan Farhan, Muhammad Yasin, Syed Bilal Rizvi

Faculty & Staff Scholarship

Congenital defects of the coronary arteries are noted in 0.2–1.4% of the general population. The first case of an anomalous origin of right coronary artery from pulmonary artery (ARCAPA) was described by Brooks in 1885. ARCAPA has an overall incidence of 0.002% in the general population. Most of the cases are asymptomatic; however, it can lead to serious complications such as heart failure, ischemia, and sudden death. A 57-year-old man presented to the cardiologist’s office with complaints of shortness of breath and fatigue. The patient also had a previous history of coronary stents and heart failure. Initially, he was evaluated …


Perfluoroalkyl Substances And Kidney Function In Chronic Kidney Disease, Anemia, And Diabetes, Baqiyyah N. Conway, Ashley N. Badders, Tina Costacou, John M. Arthur, Kim E. Innes Jan 2018

Perfluoroalkyl Substances And Kidney Function In Chronic Kidney Disease, Anemia, And Diabetes, Baqiyyah N. Conway, Ashley N. Badders, Tina Costacou, John M. Arthur, Kim E. Innes

Faculty & Staff Scholarship

Background: Anemia often complicates chronic kidney disease (CKD), leading to insufficient tissue oxygenation and hypoxic injury, the factor thought to underlie progression from CKD to renal failure. Perfluorocarbons are potent oxygen transporters used in organ preservation and synthetic blood development. Data are scarce on their relationship with kidney function, especially in diabetes where anemia and hypoxia are more prevalent. We investigated the relationship of perfluoroalkyl acids (PFAS) with kidney function and variation by diabetes and anemia status.

Methods: Data on 53,650 adults (5,210 with diabetes) were obtained from the C8 Health Project. CKD was defined as an estimated glomerular filtration …


Hepatology Mentorship: A Bold Idea, Christina C. Lindenmeyer, Elizabeth May Jan 2018

Hepatology Mentorship: A Bold Idea, Christina C. Lindenmeyer, Elizabeth May

Faculty & Staff Scholarship

No abstract provided.


Air Data Sensor Fault Detection With An Augmented Floating Limiter, Fabio Balzano, Mario Luca Fravolini, Marcello R. Napolitano, Stephane D'Urso, Michele Crispoltoni, Giuseppe Del Core Jan 2018

Air Data Sensor Fault Detection With An Augmented Floating Limiter, Fabio Balzano, Mario Luca Fravolini, Marcello R. Napolitano, Stephane D'Urso, Michele Crispoltoni, Giuseppe Del Core

Faculty & Staff Scholarship

Although very uncommon, the sequential failures of all aircraft Pitot tubes, with the consequent loss of signals for all the dynamic parameters from the Air Data System, have been found to be the cause of a number of catastrophic accidents in aviation history. This paper proposes a robust data-driven method to detect faulty measurements of aircraft airspeed, angle of attack, and angle of sideslip. This approach first consists in the appropriate selection of suitable sets of model regressors to be used as inputs of neural network-based estimators to be used online for failure detection. The setup of the proposed fault …


First Uses Of Haart 300 Rings For Aortic Valve Repair In Poland – 4 Case Studies, Jacek H. Juscinski, Andrzej Koprowski, Magdalena Kotackowska, Maciej M. Kowalik, Jan A. Rogowski, James S. Rankin Jan 2018

First Uses Of Haart 300 Rings For Aortic Valve Repair In Poland – 4 Case Studies, Jacek H. Juscinski, Andrzej Koprowski, Magdalena Kotackowska, Maciej M. Kowalik, Jan A. Rogowski, James S. Rankin

Faculty & Staff Scholarship

Introduction: Aortic valve reconstructions using geometric an- nuloplasty rings HAART 300/200 open new era in aortic valve surgery. The HAART technology resizes, reshapes, stabilizes and simplifies aortic valve repair. The HAART aortic repair rings are designed to be implanted directly into aortic annulus (un- der aortic valve leaflets).

Aim: We present first in Poland 4 cases of aortic valve recon- structions using geometric annuloplasty rings HAART 300. Material and methods: Two patients had type IA aortic insuf- ficiency (due to El-Khoury classification) – they were treated by HAART 300 ring insertion and ascending aorta prosthesis implantation. Third patient, Marfan with …


A Functional Signature Ontology (Fusion) Screen Detects An Ampk Inhibitor With Selective Toxicity Toward Human Colon Tumor Cells, Binita Das, Beth K. Neilsen, Kurt W. Fisher, Drew Gehring, Youcai Hu, Deanna J. Volle, Hyun Seok Kim, Jamie L. Mccall, David L. Kelly, John B. Macmillian, Michael A. White, Robert E. Lewis Jan 2018

A Functional Signature Ontology (Fusion) Screen Detects An Ampk Inhibitor With Selective Toxicity Toward Human Colon Tumor Cells, Binita Das, Beth K. Neilsen, Kurt W. Fisher, Drew Gehring, Youcai Hu, Deanna J. Volle, Hyun Seok Kim, Jamie L. Mccall, David L. Kelly, John B. Macmillian, Michael A. White, Robert E. Lewis

Faculty & Staff Scholarship

AMPK is a serine threonine kinase composed of a heterotrimer of a catalytic, kinase-containing α and regulatory β and γ subunits. Here we show that individual AMPK subunit expression and requirement for survival varies across colon cancer cell lines. While AMPKα1 expression is relatively consistent across colon cancer cell lines, AMPKα1 depletion does not induce cell death. Conversely, AMPKα2 is expressed at variable levels in colon cancer cells. In high expressing SW480 and moderate expressing HCT116 colon cancer cells, siRNA-mediated depletion induces cell death. These data suggest that AMPK kinase inhibition may be a useful component of future therapeutic strategies. …


Genetic Assessment Of Inbred Chicken Lines Indicates Genomic Signatures Of Resistance To Marek's Disease, Lingyang Xu, Yanghua He, George E. Liu, Huanmin Zhang, Hans H. Cheng, Robert L. Taylor Jr, Jiuzhou Song Jan 2018

Genetic Assessment Of Inbred Chicken Lines Indicates Genomic Signatures Of Resistance To Marek's Disease, Lingyang Xu, Yanghua He, George E. Liu, Huanmin Zhang, Hans H. Cheng, Robert L. Taylor Jr, Jiuzhou Song

Faculty & Staff Scholarship

Background: Marek’s disease (MD) is a highly contagious pathogenic and oncogenic disease primarily affecting chickens. However, the mechanisms of genetic resistance for MD are complex and not fully understood. MD-resistant line 63 and MD-susceptible line 72 are two highly inbred progenitor lines of White Leghorn. Recombinant Congenic Strains (RCS) were developed from these two lines, which show varied susceptibility to MD.

Results: We investigated genetic structure and genomic signatures across the genome, including the line 63 and line 72, six RCSs, and two reciprocally crossed flocks between the lines 63 and 72 (F1 63 × 72 and F1 72 × …


Development Of A Dynamic Model And Control System For Load-Following Studies Of Supercritical Pulverized Coal Power Plants, Parikshit Sarda, Elijah Hedrick, Katherine Reynolds, Debangsu Bhattacharyya, National Energy Technology Laboratory Jan 2018

Development Of A Dynamic Model And Control System For Load-Following Studies Of Supercritical Pulverized Coal Power Plants, Parikshit Sarda, Elijah Hedrick, Katherine Reynolds, Debangsu Bhattacharyya, National Energy Technology Laboratory

Faculty & Staff Scholarship

Traditional energy production plants are increasingly forced to cycle their load and operate under low-load conditions in response to growth in intermittent renewable generation. A plant-wide dynamic model of a supercritical pulverized coal (SCPC) power plant has been developed in the Aspen Plus Dynamics® (APD) software environment and the impact of advanced control strategies on the transient responses of the key variables to load-following operation and disturbances can be studied. Models of various key unit operations, such as the steam turbine, are developed in Aspen Custom Modeler® (ACM) and integrated in the APD environment. A coordinated control system (CCS) is …


Novel Caries Loci In Children And Adults Implicated By Genome-Wide Analysis Of Families, Manika Govil, Nandita Mukhopadhyay, Daniel E. Weeks, Eleanor Feingold, John R. Shaffer, Steven M. Levy, Alexandre R. Vieira, Rebecca L. Slayton, Daniel W. Mcneil, Robert J. Weyant, Richard J. Crout, Mary L. Marazita Jan 2018

Novel Caries Loci In Children And Adults Implicated By Genome-Wide Analysis Of Families, Manika Govil, Nandita Mukhopadhyay, Daniel E. Weeks, Eleanor Feingold, John R. Shaffer, Steven M. Levy, Alexandre R. Vieira, Rebecca L. Slayton, Daniel W. Mcneil, Robert J. Weyant, Richard J. Crout, Mary L. Marazita

Faculty & Staff Scholarship

Background: Dental caries is a common chronic disease among children and adults alike, posing a substantial health burden. Caries is affected by multiple genetic and environmental factors, and prior studies have found that a substantial proportion of caries susceptibility is genetically inherited.

Methods: To identify such genetic factors, we conducted a genome-wide linkage scan in 464 extended families with 2616 individuals from Iowa, Pennsylvania and West Virginia for three dental caries phenotypes: (1) PRIM: dichotomized as zero versus one or more affected primary teeth, (2) QTOT1: age-adjusted quantitative caries measure for both primary and permanent dentitions including pre-cavitated lesions, and …


Metabolic And Transcriptional Modules Independently Diversify Plasma Cell Lifespan And Function, Wing Y. Lam, Arijita Jash, Cong-Hui Yao, Lucas D'Souza, Rachel Wong, Ryan M. Nunley, Gordon P. Meares, Gary J. Patti, Deepta Bhattacharya Jan 2018

Metabolic And Transcriptional Modules Independently Diversify Plasma Cell Lifespan And Function, Wing Y. Lam, Arijita Jash, Cong-Hui Yao, Lucas D'Souza, Rachel Wong, Ryan M. Nunley, Gordon P. Meares, Gary J. Patti, Deepta Bhattacharya

Faculty & Staff Scholarship

Plasma cell survival and the consequent duration of immunity vary widely with infection or vaccination. Using fluorescent glucose analog uptake, we defined multiple developmentally independent mouse plasma cell populations with varying life- spans. Long-lived plasma cells imported more fluo- rescent glucose analog, expressed higher surface levels of the amino acid transporter CD98, and had more autophagosome mass than did short-lived cells. Low amino acid concentrations triggered re- ductions in both antibody secretion and mitochon- drial respiration, especially by short-lived plasma cells. To explain these observations, we found that glutamine was used for both mitochondrial respira- tion and anaplerotic reactions, yielding …


Learning Local, Quenched Disorder In Plasticity And Other Crackling Noise Phenomena, Stefanos Papanikolaou Jan 2018

Learning Local, Quenched Disorder In Plasticity And Other Crackling Noise Phenomena, Stefanos Papanikolaou

Faculty & Staff Scholarship

When far from equilibrium, many-body systems display behavior that strongly depends on the initial conditions. A characteristic such example is the phenomenon of plasticity of crystalline and amorphous materials that strongly depends on the material history. In plasticity modeling, the history is captured by a quenched, local and disordered flow stress distribution. While it is this disorder that causes avalanches that are commonly observed during nanoscale plastic deformation, the functional form and scaling properties have remained elusive. In this paper, a generic formalism is developed for deriving local disorder distributions from field- response (e.g., stress/strain) timeseries in models of crackling …


Shortening Of The Pittsburgh Sleep Quality Index Survey Using Factor Analysis, Oluremi A. Famodu, Makenzie L. Barr, Ida Holaskova, Wenjun Zhou, Jesse S. Morrell, Sarah E. Colby, Melissa D. Olfert Jan 2018

Shortening Of The Pittsburgh Sleep Quality Index Survey Using Factor Analysis, Oluremi A. Famodu, Makenzie L. Barr, Ida Holaskova, Wenjun Zhou, Jesse S. Morrell, Sarah E. Colby, Melissa D. Olfert

Faculty & Staff Scholarship

Objective/Introduction. Lengthy surveys have the potential to burden users and can lead to inaccuracies. Conducting analyses to shorten existing validated surveys is beneficial. The objective, therefore, was to shorten the Pittsburgh Quality Sleep Index (PSQI) for young adults. Methods. PSQI data from 1246 college students were used. An exploratory factor analysis (FA) was utilized to shorten survey after dropping select items. Nonparametric correlation analysis (Spearman’s rho) was conducted between the global sleep scores of the shortened and original surveys. Agreements tests (Kappa and McNemar’s test) measured the agreement of the surveys and sensitivity and specificity were evaluated. Results. Six factors …