Digital Commons Network^™

Climate Of Utah, Robert R. Gillies, R. Douglas Ramsey

Wildland Resources Faculty Publications

Climate in Utah is greatly influenced by its location within the North American Continent with significant local modifications due to topography. Northern, higher-latitude locations are generally cooler than southern, lower-latitude locations. Likewise, higher-elevation locations are typically cooler and wetter than lower-elevation locations.

Molecular Monitoring Of African Swine Fever Control Areas: Adult-Tick Targeted Re-Evaluation Of Mkuze Game Reserve, South Africa, L. F. Arnot, Johan T. Du Toit, A. D.S. Bastos

Wildland Resources Faculty Publications

The Mkuze Game Reserve (MGR), in north-eastern KwaZulu-Natal Province, South Africa is an African swine fever virus (ASF) controlled area. In a survey conducted in 1978, ASF prevalence in warthogs and Ornithodoros ticks in MGR was determined to be 2% and 0.06%, respectively. These values, acknowledged as being unusually low compared to other East and southern African ASF-positive sylvatic-cycle host populations, have not been assessed since. The availability of a sensitive PCR-based virus detection method, developed specifically for the sylvatic tampan host, prompted a re-evaluation of ASF virus (ASFV) prevalence in MGR ticks. Of the 98 warthog burrows inspected for …

Watersheds Of Utah, R. Douglas Ramsey, Roger E. Banner, Ellie Leydsman Mcginty

Wildland Resources Faculty Publications

The USDA Natural Resources Conservation Service (NRCS) and the United States Geological Survey (USGS), as part of a national effort, have generated watershed, or hydrologic, boundaries for the United States. Hydrologic boundaries define the aerial extent of surface water drainage to a point. Hydrologic units, through four levels, were created in the 1970s. Since the 1970s, the USGS developed a hierarchical hydrologic unit code (HUC) for the United States. The hierarchical system divides the country into 21 regions, 222 sub-regions, 352 basins, and 2,149 sub-basins. During the late 1970s, the NRCS initiated a national program to divide the sub-basins into …

Commentary Human-Wildlife Conflicts: Emerging Challenges And Opportunities, Terry A. Messmer

Human–Wildlife Interactions

Wildlife management has been defined as the art and science of applying scientific knowledge and ecological principles to manage wildlife populations for human objectives. Historically, wildlife managers have sought to maintain or increase desirable wildlife species (e.g., game fi sh, birds, and mammals) to meet human food and recreational needs by directly manipulating their habitats or the populations themselves. However, many contemporary rural and urban environments are inhabited by much larger populations of wildlife than were present a century ago. As local wildlife populations increase, so can the damage caused by them. Additionally, because many rare species inhabit private lands, …

Home Range And Habitat Use Of Feral Hogs In Congaree National Park, South Carolina, Brad A. Friebel, Patrick G.R. Jodice

Human–Wildlife Interactions

Feral hogs (Sus scrofa) are a widespread exotic species that currently occur in most states within the United States and are common throughout the southeastern United States. We radio-collared and tracked feral hogs from April 2005 to November 2006 in Congaree National Park (CNP), South Carolina, USA. The CNP is one of the largest and most intact tracts of old-growth, bottomland hardwood forest remaining in the United States. We measured home range size and determined habitat use for male and female hogs. The mean (± SE) home range sizes for male hogs (n = 7) and female hogs …

Translocation Of Nine-Banded Armadillos, Daniel J. Gammons, Michael T. Mengak, L. Mike Conner

Human–Wildlife Interactions

During the last 150 years, nine-banded armadillos (Dasypus novemcinctus) have increased their range and abundance in the southeastern United States. When foraging, armadillos cause damage to agricultural crops, as well as structural damage to driveways and foundations. Homeowners frequently use translocation to reduce local armadillo abundance. Despite its popularity with the general public, however, the appropriateness of nuisance wildlife translocation presents concerns for biologists. Our objective was to address some of these concerns by examining survival and movements of translocated armadillos. We translocated 12 armadillos (9 male, 3 female) equipped with radio-transmitters and compared their survival and movements …

Commentary Setting Research Priorities At Wildlife Services’ National Wildlife Research Center, Richard L. Bruggers

Human–Wildlife Interactions

No abstract provided.

Deer Guards And Bump Gates For Excluding White-Tailed Deer From Fenced Resources, Kurt C. Vercauteren, Nathan W. Seward, Michael J. Lavelle, Justin W. Fischer, Gregory E. Phillips

Human–Wildlife Interactions

White-tailed deer (Odocoileus virginianus) causing damage is a reoccurring theme in the realm of wildlife damage management, especially regarding human safety, disease transmission, and agricultural losses. Fences often are the only reliable long-term nonlethal means of controlling deer damage. The efficacy of fences, however, relies on their weakest link: human-operated gates. Although not overly time-consuming, the act of closing a gate appears to be a burden to individuals, resulting in open-access to an otherwise protected resource. We examined the efficacy of 2 alternatives to traditional gates to evaluate their potential to be used for excluding or containing deer. …

White-Tailed Deer Attacking Humans During The Fawning Season: A Unique Human-Wildlife Conflict On A University Campus, Ryan D. Hubbard, Clayton K. Nielsen

Human–Wildlife Interactions

Human–wildlife conflicts associated with suburban white-tailed deer (Odocoileus virginianus) populations have increased in the last 20 years. Primary threats to human health and safety associated with overabundant deer populations include deer–vehicle collisions, attacks on humans, disease, and damage to native and ornamental vegetation. During the fawning seasons (May–June) of 2005 and 2006, 13 confirmed incidences of white-tailed deer attacking humans occurred on the campus of Southern Illinois University–Carbondale. To our knowledge, no report exists that documents free-ranging does attacking humans during the fawning season. The attacks occurred at multiple locations on campus, with injuries to humans, including minor …

Safety Management Systems: How Useful Will The Faa National Wildlife Strike Database Be?, Richard A. Dolbeer, Sandra E. Wright

Human–Wildlife Interactions

The National Wildlife Strike Database for Civil Aviation in the United States became operational in 1995 with the initiation of data entry of all strike reports beginning in 1990. The database contained 82,057 reported strikes from 1990 to 2007. About 9,800 of these strike reports noted damage to the aircraft, of which 2,700 indicated the damage was substantial. The database has proven to be a useful source of objective information on the extent and nature of wildlife strikes for personnel at individual airports and for researchers and regulatory agencies at the national level. With the impending requirement for airports in …

A Decade Of U.S. Air Force Bat Strikes, Suzanne C. Peurach, Carla J. Dove, Laura Stepko

Human–Wildlife Interactions

From 1997 through 2007, 821 bat strikes were reported to the U.S. Air Force (USAF) Safety Center by aircraft personnel or ground crew and sent to the National Museum of Natural History, Smithsonian Institution, for identification. Many samples were identified by macroscopic and or microscopic comparisons with bat specimens housed in the museum and augmented during the last 2 years by DNA analysis. Bat remains from USAF strikes during this period were received at the museum from 40 states in the United States and from 20 countries. We confirmed that 46% of the strikes were caused by bats, but we …

Personal And Corporate Liability In The Aftermath Of Bird Strikes: A Costly Consideration, Larry A. Dale

Human–Wildlife Interactions

This paper details liability issues inherent in bird–aircraft collisions (bird-strike) incidents at airports and discusses how airport managers and operators must strive to conduct accurate assessments and develop and implement an effective wildlife management plan. Such efforts are mandated by Federal Aviation Administration (FAA) regulations, and failure to follow them may result in loss of human life and property, as well as large financial penalties for managers and operators and adverse media attention and public criticism for the airport authority.

Developing Bird-Strike Risk Assessment Models For Open-Water Restorations, Justin D. Hart, Alison Colyer, John R. Allan

Human–Wildlife Interactions

Mineral extraction sites that are restored to open water can increase bird-strike risk if they are planned near airports. This can generate conflict between the minerals industry and safeguarding authorities. To help resolve this potential conflict, it would be useful to predict how new restorations affect local water-bird populations so that mineral deposits can be exploited and restored in safeguarded zones without compromising flight safety. Bird abundances and movements at new restorations can be estimated with statistical models that use the environmental characteristics of restoration schemes as predictor variables. These models can improve guidance in safeguarding, provided that they comprise …

Management Of Bayberry In Relation To Tree-Swallow Strikes At John F. Kennedy International Airport, New York, Glen E. Bernhardt, Zachary J. Patton, Lisa A. Kutschbach-Brohl, Richard A. Dolbeer

Human–Wildlife Interactions

Tree swallows (Tachycineta bicolor) have been a periodic bird-strike problem at John F. Kennedy International Airport (JFKIA), New York, New York, causing runway closures, flight delays, and damage to aircraft following the ingestion of bird flocks into engines. We examined 65 tree swallows collected at JFKIA in October 2001 to determine food sources that were attracting the birds to the airport. Digestive tracts of all 65 specimens contained northern bayberry fruits (Myrica pensylvanica), averaging 15.6 fruits per bird or 3.4% of the bird’s body mass in specimens where the entire tract was dissected. Bayberry fruits are …

Observations Of Neck-Collared Canada Geese Near John F. Kennedy International Airport, New York, Thomas W. Seamans, Scott E. Clemons, Allen L. Gosser

Human–Wildlife Interactions

Canada geese (Branta canadensis) often cause significant damage when they strike aircraft. They are responsible for a reported minimum of $2.6 million in damage per year to civil aviation in the United States. Knowledge of goose movements in relation to airports would allow wildlife managers to allocate time and funds to manage those populations that pose the greatest threat to aircraft. We placed alpha-numeric neck collars on 300 Canada geese within 8 km of both John F. Kennedy International Airport (JFKIA) and LaGuardia Airport in New York, New York. We conducted weekly observations for 2 years within a …

Burrowing Owl And Other Migratory Bird Mitigation For A Runway Construction Project At Edwards Afb, Amber L. Hoehn, Mark Hagan, Mark Bratton

Human–Wildlife Interactions

Edwards Air Force Base (AFB) scheduled the construction of a runway in the spring of 2007. The runway would be in an area that contained migratory birds and their habitat. The construction project would be near Edwards AFB main runway and had the potential not only to impact species protected under the Migratory Bird Treaty Act (MBTA), including the burrowing owl (Athene cunicularia), but also to increase bird and wildlife–aircraft strike hazards in the active flightline areas. To discourage nesting in the project area, reduce the potential for bird and wildlife–aircraft strikes, and maintain compliance with federal environmental …

From The Field Suspending Vulture Effigies From Roosts To Reduce Bird Strikes, Steven A. Ball

Human–Wildlife Interactions

No abstract provided.

Molt Migration By Giant Canada Geese In Eastern South Dakota, Charles D. Dieter, Bobby J. Anderson

Human–Wildlife Interactions

We captured giant Canada geese (Branta canadensis maxima) in 7 counties in eastern South Dakota during the summer molting period, 2000–2003. We attached very high frequency (VHF) transmitters to 150 adult female geese with brood patches, and leg bands to 3,839 geese. We documented molt migrations using VHF telemetry and indirect band recovery at locations north of South Dakota. Telemetry of radio-collared female geese during the breeding season indicated that 56% of nonbreeders, 81% of unsuccessful breeders, and 19% of successful female breeders embarked on a molt migration. Five of 34 geese that underwent molt migrations moved to northeast South …

Survival And Productivity Of A Low-Density Black Bear Population In Rocky Mountain National Park, Colorado, Roger A. Baldwin, Louis C. Bender

Human–Wildlife Interactions

Historically, Rocky Mountain National Park (RMNP) has supported a small black bear (Ursus americanus) population of low productivity. Increased visitor use of the park and development around its periphery could lead to a reduction in population viability of RMNP’s bear population or could increase the potential for human–bear conflict. Therefore, we investigated contemporary survival and productivity parameters for RMNP’s black bear population from 2003 to 2006 and compared these values to historic levels (1984–1991) and population means throughout the western United States to clarify the current status of RMNP’s bear population. The contemporary black bear population showed signs …

Coexisting With Cougars: Public Perceptions, Attitudes, And Awareness Of Cougars On The Urban-Rural Fringe Of Calgary, Alberta, Canada, Clarisse Thornton, Michael S. Quinn

Human–Wildlife Interactions

Interactions between humans and cougars (Puma concolor) have been steadily increasing over the past 20 years largely due to human encroachment into cougar habitat and an increase in the human population. We determined the attitudes, knowledge, and perceptions toward cougars by residents in the urban-rural fringe of Calgary, Alberta, Canada, an area populated by both cougars and humans. We sent a survey to a stratified, random sample of 1,508 residents. Survey analysis included a potential for conflict index (PCI) to help provide quantitative direction for future cougar management. We analyzed and tested for differences among 7 variables: livestock …

Modeling Integrated Decisions For A Municipal Water System With Recourse And Uncertainties: Amman, Jordan, David E. Rosenberg, Jay Lund

Civil and Environmental Engineering Faculty Publications

Stochastic mixed-integer optimization is used to identify a portfolio of long- and short-term supply and conservation actions for a municipal water system to cost-effectively accommodate a distribution of water shortages. Alternative robust, grey-number, and best/worst case formulations systematically explore implications of uncertainties in action costs, life spans, water volumes gained or saved, shortage levels, and shortage probabilities. A detailed example for Amman, Jordan considers 23 potential actions. Results show: (1) remarkable consistency occurs across the different modeling approaches. (2) Conserving water—reducing leakage and targeting select customers to install water efficient appliances—plays an important and growing role over time. (3) A …

Comparison Of The Complete Genome Sequencesof Bifidobacterium Animalis Subsp. Lactis Dsm 10140 And Bl-04, R. Barrangou, E. P. Briczinski, L. L. Traeger, J. R. Loquasto, M. Richards, P. Horvath, A. C. Coute-Monvoisin, G. Leyer, S. Rendulic, J. L. Steele, Jeff Broadbent, T. Oberg, E. G. Dudley, S. Schuster, D. A. Romero, R. F. Roberts

Nutrition, Dietetics, and Food Sciences Faculty Publications

Bifidobacteria are important members of the human gut flora, especially in infants. Comparative genomic analysis of two Bifidobacterium animalis subsp. lactis strains revealed evolution by internal deletion of consecutive spacer-repeat units within a novel clustered regularly interspaced short palindromic repeat locus, which represented the largest differential content between the two genomes. Additionally, 47 single nucleotide polymorphisms were identified, consisting primarily of nonsynonymous mutations, indicating positive selection and/or recent divergence. A particular nonsynonymous mutation in a putative glucose transporter was linked to a negative phenotypic effect on the ability of the variant to catabolize glucose, consistent with a modification in the …

Hydrologic Control Of Nitrogenremoval, Storage And Export In A Mountain Stream, R. O. Hall Jr., Michelle A. Baker, C. D. Arp, B. J. Koch

Biology Faculty Publications

Nutrient cycling and export in streams and rivers should vary with flow regime, yet most studies of stream nutrient transformation do not include hydrologic variability. We used a stable isotope tracer of nitrogen (¹⁵N) to measure nitrate (NO₃^-) uptake, storage, and export in a mountain stream, Spring Creek, Idaho, U.S.A. We conducted two tracer tests of 2-week duration during snowmelt and baseflow. Dissolved and particulate forms of ¹⁵N were monitored over three seasons to test the hypothesis that stream N cycling would be dominated by export during floods, and storage during low flow. Floods …

Changes In A Tropical Forest Support Metabolic Zero-Sum Dynamics, S.K. Morgan Ernest, Ethan P. White, J. H. Brown

Biology Faculty Publications

Major shifts in many ecosystem-level properties of tropical forests have been observed, but the processes driving these changes are poorly understood. Over the past two decades, the forest on Barro Colorado Island, Panama (BCI) exhibited a 20% decrease in the number of trees and a 10% increase in average tree diameter. Here we show that these changes are consistent with a zero-sum constraint operating in this forest. Zero-sum constraints result when the total resource use of an ecosystem is limited by available resources. This causes increases in resource use by some groups of organisms to be compensated for by decreases …

Taking Species Abundance Distributions Beyond Individuals, H. Morlon, Ethan P. White, R. S. Etienne, J. L. Green, A. Ostling, D. Alonso, B. J. Enquist, F. He, A. H. Hurlbert, A. E. Magurran, B. A. Maurer, B. J. Mcgill, H. Olff, D. Storch, T. Zillio

Biology Faculty Publications

The species abundance distribution is one of the few “universal” patterns in ecology. Research on this fundamental distribution has been focused to the study of numerical counts, irrespective of the traits of individuals. Here we show that considering a set of Generalized Species Abundance Distributions (GSADs) that encompass several abundance measures, specifically numerical abundance, biomass and resource use can provide novel insights into organizational forces at play in ecological communities. We first leverage a comprehensive dataset to investigate the similarity and difference between GSADs. We then use classical probability theory and allometric scaling laws to explore theoretical linkages among GSADs …

Long-Term Monitoring And Experimentalmanipulation Of A Chihuahuan Desert Ecosystem Near Portal, Arizona, Usa, S.K. Morgan Ernest, T. J. Valone, J. H. Brown

Biology Faculty Publications

Desert ecosystems have long served as model systems in the study of ecological concepts (e.g., competition, resource pulses, top-down/bottom-up dynamics). However, the inherent variability of resource availability in deserts, and hence consumer dynamics, can also make them challenging ecosystems to understand. Study of a Chihuahuan desert ecosystem near Portal, Arizona, USA, began in 1977. At this site, 24 experimental plots were established in 1977 and divided among controls and experimental manipulations. Experimental manipulations over the years include removal of all or some rodent species, all or some ants, seed additions, and various alterations of the annual plant community. While some …

Selective Herbivory By The Woodrat (Neotoma Lepida) On Joshua Trees (Yucca Brevifolia), M P. Stanford, Nancy J. Huntly

Biology Faculty Publications

We studied herbivory by the desert woodrat (Neotoma lepida) on Joshua trees (Yucca brevifolia) in the Mojave Desert to determine whether N. lepida fed selectively based on leaf nitrogen content. We measured leaf nitrogen content and the location and amount of herbivory by woodrats on Y. brevifolia trees in southwestern Utah, USA. Neotoma lepida removed the outer tips of leaves (1/3 to 2/3 of total leaf length) but left leaf bases, which had lower nitrogen content, uneaten. Herbivory by N. lepida also was concentrated on rosettes that were oriented south, and these had significantly higher nitrogen content than rosettes that …

An Introduction To The Biocomplexity Of Sanak Island, Western Gulf Alaska, Hd G. Maschner, M Betts, J Cornell, B Finney, J A. Dunne, Nancy J. Huntly, J W. Jordan, N Misarti, K L. Reedy-Maschner, R Russell

Biology Faculty Publications

The Sanak Biocomplexity Project is a transdisciplinary research effort focused on a small island archipelago 50 km south of the Alaska Peninsula in the western Gulf of Alaska. This team of archaeologists, terrestrial ecologists, social anthropologists, intertidal ecologists, geologists, oceanographers, paleoecologists, and modelers is seeking to understanding the role of the ancient, historic, and modern Aleut in the structure and functioning of local and regional ecosystems. Using techniques ranging from systematic surveys to stable isotope chemistry, long-term shifts in social dynamics and ecosystem structure are present in the context of changing climatic regimes and human impacts. This paper presents a …

Applications Of Modern Classification Methods To Predict Occurrences Of Rare And Invasive Plant Species, Stacey Reynolds

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Statistical classification methods are among the most widely used statistical procedures in ecology. Applications include vegetation mapping by remote sensing (Steele 2000), discrimination of subspecies using morphological measurements (Fisher 1936, 1938; Conner and Schenk 2003), and species distribution modelling (Guisan and Zimmerman 2000). Examples of the last application abound in the ecological literature and include predicting the distribution or characteristics of plant species (see, e.g., Austin et al. 1990), predicting presence and absence aquatic biota in streams (Hawkins et al. 2000), and habit at relationships of terrestrial animal species (Welch and MacMahon 2005). Over the last 20 years two mainstays …

Comparison Of Exact Methods For Analyzing Family-Based Samples, Abbie Lundgreen

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Family-based association tests are used to identify genes that increase the risk of developing a disease, while controlling for spurious associations caused by population structure. The exact family-based association test, exact FBAT, is a unified approach which can be app lied to tests of different genetic models, sampling designs, null hypotheses , and missing parental information.

The purpose of this report is to compare the power of the exact FBAT with two other tests, exact conditional logistic regression (CLR) and the exact trend test for clustered data (QEM). Pedigrees of sibships were simulated based upon a variety of different parameters, …