Digital Commons Network^™

Characterization Of Brd4 During Mammalian Post-Meiotic Sperm Development, Jessica M. Bryant, Greg Donahue, Xiaoshi Wang, Mirella Meyer-Ficca, Lacey J. Luense, Angela H. Weller, Marisa S. Bartolomei, Gerd A. Blobel, Ralph G. Meyer, Benjamin A. Garcia, Shelley L. Berger

Animal, Dairy, and Veterinary Science Faculty Publications

During spermiogenesis, the post-meiotic phase of mammalian spermatogenesis, transcription is progressively repressed as nuclei of haploid spermatids are compacted through a dramatic chromatin reorganization involving hyper-acetylation and replacement of most histones with protamines. Although BRDT functions in transcription and histone removal in spermatids, it is unknown whether other BET family proteins play a role. Immunofluorescence of spermatogenic cells revealed BRD4 in a ring around the nuclei of spermatids containing hyper-acetylated histones. The ring lies directly adjacent to the acroplaxome, the cytoskeletal base of the acrosome, previously linked to chromatin reorganization. The BRD4 ring does not form in acrosomal mutant mice. …

Dairy Herd - Level Prevalence Of Johne's Disease And Bvd In The Intermountain West Of The U.S.A. And Farm Management Practices And Characteristics For Test-Positive Herds, David J. Wilson, Kerry A. Rood, C. Whitehouse, J. Bunnell, G. M. Goodell, T. M. Byrem

Animal, Dairy, and Veterinary Science Faculty Publications

Herd-level prevalence of Mycobacterium avium subsp. paratuberculosis (MAP), causative agent of Johne’s disease (JD) and Bovine Viral Diarrhea (BVD) virus were estimated on dairy farms in Utah. Duplicate milks were collected at 3-4 day intervals on 5 dates from each bulk tank on participating farms. Samples were tested at separate laboratories for BVD (real-time, RT-PCR) and for JD/MAP (ELISA and qPCR). 151/209 (72%) eligible dairy farms participated. Farms detected positive were: 58 JD (38%) and 14 BVD (9%); 5 farms had both diseases. Follow up visited farms’ (n=22) means, medians: 778,420 milking cows; 20,052 lbs, 20,311 lbs 305d milk; 175,545/ml, …

A Millennium-Length Reconstruction Of Bear River Stream Flow, Utah, J. R. Derose, M. Bekker, Shih-Yu (Simon) Wang, R. Kjelgren, E. B. Allen, T. Bardsley, B. M. Buckley

Plants, Soils, and Climate Faculty Publications

The Bear River contributes more water to the eastern Great Basin than any other river system. It is also the most significant source of water for the burgeoning Wasatch Front metropolitan area in Northern Utah. Despite its importance for water resources for the region’s agricultural, urban, and wildlife needs, our understanding of the variability of Bear River’s stream flow derives entirely from the short instrumental record (1943-2010). Here we present a 1,200-year calibrated and verified tree-ring reconstruction of stream flow for the Bear River that explains 67% of the variance of the instrumental record over the period from 1943-2010. Furthermore, …

Feeding Two Birds With One Scone? The Relationship Between Teaching And Research For Graduate Students Across The Disciplines, Joanna Gilmore, David M.G. Lewis, Michelle Maher, David F. Feldon, Briana E. Timmerman

Instructional Technology and Learning Sciences Faculty Publications

We surveyed over 300 graduate students at a Southeastern research university to increase our understanding of their perceptions of (a) the connection between teaching and research, (b) the means by which integration occurs, and (c) the extent to which teaching and research contribute to a shared skill set that is of value in both contexts. We also examined differences across disciplines in the perception of this teaching-research nexus. Overall, findings indicate that graduate students perceive important relationships between teaching and research, and they point toward opportunities for administrators to promote teaching and research integration.

Annual Report- Greater Sage-Grouse Response To Season-Long And Prescribed Grazing (Nrcs Conservation Practice 528) On Paired Ecological Sites, Seth J. Dettenmaier, Terry A. Messmer

Wildland Resources Faculty Publications

No abstract provided.

Combining High-‐‐Speed Cameras And Stop-‐‐Motion Animation Software To Support Students’ Modeling Of Human Body Movement, Victor R. Lee

Instructional Technology and Learning Sciences Faculty Publications

Biomechanics, and specifically the biomechanics associated with human movement,is a potentially rich backdrop against which educators can design innovative science teaching and learning activities. Moreover, the use of technologies associated with biomechanics research, such as high-‐‐speed cameras that can produce high quality slow-‐‐motion video, can be deployed in such a way to support students’ participation in practices of scientific modeling. As participants in classroom design experiment, fifteen fifth-‐‐grade students worked with high-‐‐speed cameras and stop-‐‐motion animation software (SAM Animation) over several days to produce dynamic representations of motion and body movement. The designed series of learning activities involved iterative cycles …

Dna Methylation In Lung Tissues Of Mouse Offspring Exposed In Utero To Polycyclic Aromatic Hydrocarbons: Appendix E. Results Of Gene Ontology Analysis For Differentially Methylated Genes, Trevor Fish, Abby D. Benninghoff

Browse all Datasets

This Microsoft Excel document provides complete results for AgriGo gene ontology analyses of differentially methylated genes in the form of three tables, as follows:

Table 1. AgriGO GO Slim Results for Biological Process, Molecular Function and Cellular Compartment for Sham, AdjDBC and TumDBC Tissues

Table 2. AgriGO GO Slim Results for Biological Process, Molecular Function and Cellular Compartment for Sham, AdjBaP and TumBaP Tissues

Table 3. AgriGO GO Slim Results for Biological Process, Molecular Function and Cellular Compartment for sham, TumDBC and TumBaP Tissues

Harvest Demographics Of Temperate-Breeding Canada Geese In South Dakota, 1967–1995, Jeffrey S. Gleason, Jonathan A. Jenks, David E. Naugle, Paul W. Mammenga, Spencer J. Vaa, Jennifer M. Pritchett

Human–Wildlife Interactions

In South Dakota, breeding giant Canada geese (Branta canadensis maxima) have increased substantially, and harvest management strategies have been implemented to maximize hunting opportunity (e.g., special early-September seasons) on local, as well as molt-migrant giant Canada geese (B. c. interior) while still protecting lesser abundant Arctic breeding Canada geese and cackling geese (e.g., B. hutchinsii, B. minima). Information on important parameters, such as survival and recovery rates, are generally lacking for giant Canada geese in the northern Great Plains. Patterns in Canada goose band recoveries can provide insight into the distribution, chronology, and harvest pressures …

Modeling Waterfowl Damage To Crops Surrounding The Quill Lakes In Saskatchewan, Carolyn J. Callaghan, Bahram Daneshfar, Donald J. Thompson

Human–Wildlife Interactions

Waterfowl using the Central Flyway congregate on staging lakes before fall migration. The Quill lakes area of Saskatchewan Province, Canada, contains many staging lakes, which are surrounded by annual cropland. Crop losses to waterfowl occur every year, but the severity fluctuates greatly from year to year. We obtained historical crop compensation data, waterfowl-staging surveys, harvest chronology, and weather records from various agencies. Using GIS, we referenced all data types to potential claim-land parcels (0.65 km² for the damage model and 5 km² for the density model). We constructed empirical landscape level logistic regression models, weighting factors influencing the …

Human–Felid Conflict In Corridor Habitats: Implications For Tiger And Leopard Conservation In Terai Arc Landscape, India, Manjari Malviya, Krishnamurthy Ramesh

Human–Wildlife Interactions

We use the Rajaji-Corbett corridor in the Terai Arc Landscape (TAL) in India to examine the pattern of human–felid conflict in wildlife corridors and its implications for the long-term persistence of tigers (Panthera tigris) and leopards (Panthera pardus) in the landscape. We administered a questionnaire survey of people residing in and around the corridor and also examined forest department records. Results revealed that leopards caused more frequent losses, whereas tigers caused greater economic losses. Local communities perceived leopards as a bigger threat than tigers, due to the intrusive nature of leopards (i.e., entering villages and houses …

Thank Goodness They Got All The Dragons: Wildlife Damage Management Through The Ages, Maureen G. Frank, Michael R. Conover

Human–Wildlife Interactions

Whenever the needs both of humans and wildlife overlap, there is a potential for wildlife damage to occur. Wildlife damage has been an issue throughout human history. Typical history essays about wildlife damage management (WDM) examine a chronology of events on the topic. This paper takes a different approach. Looking through the history of WDM, we considered the driving factors behind changes in the management of wildlife damage. Based on the events of WDM history, we defined 4 factors that underlie major shifts in the management of wildlife damage: human population needs, economic stability, social paradigms, and tools and techniques. …

The National Wildlife Control Training Program: An Evolution In Wildlife Damage Management Education For Industry Professionals, Paul D. Curtis, Raj Smith, Scott Hygnstrom

Human–Wildlife Interactions

Managing wildlife and reducing damage in rural areas has traditionally been achieved by hunting and trapping problem species or by preventing animals from accessing crops and entering buildings. With urban sprawl, specialized tools and management approaches often are needed to reduce wildlife conflicts in developed landscapes. To address these issues, the private wildlife control industry has grown considerably during the past 2 decades. State wildlife agencies have regulatory authority and oversight of this industry, and there is an increasing trend toward licensing or certification of commercial wildlife control operators (WCOs). Regulations differ in every state, however, and no consistent standard …

Quantitative Assessment Of Bullet Fragments In Viscera Of Sheep Carcasses As Surrogates For White-Tailed Deer, Luis Cruz-Martinez, Marrett D. Grund, Patrick T. Redig

Human–Wildlife Interactions

Avian scavengers, such as bald eagles (Haliaeetus leucocephalus), can be exposed to lead through the consumption of spent lead from ammunition in carcasses of animals shot with lead-based projectiles. Few studies have examined the degree of bullet fragmentation in viscera (offal) of game mammals. Our objective was to quantify the number of bullet fragments deposited in sheep carcasses shot with different types of lead and lead-free, high-velocity centerfire rifle bullets and with lead projectiles fired from shotguns and muzzleloader rifles marketed for hunting white-tailed deer (Odocoileus virginianus). We hypothesized that after controlling for velocity, angle of …

Contrasting Effects Of Different Mammalian Herbivores On Sagebrush Plant Communities, Kari E. Veblen, Kyle Nehring, Chris Mcglone, Mark Ritchie

Wildland Resources Faculty Publications

Herbivory by both grazing and browsing ungulates shapes the structure and functioning of terrestrial ecosystems worldwide, and both types of herbivory have been implicated in major ecosystem state changes. Despite the ecological consequences of differences in diets and feeding habits among herbivores, studies that experimentally distinguish effects of grazing from spatially co-occurring, but temporally segregated browsing are extremely rare. Here we use a set of long-term exclosures in northern Utah, USA, to determine how domestic grazers vs. wild ungulate herbivores (including browsers and mixed feeders) affect sagebrush-dominated plant communities that historically covered ~62 million ha in North America. We sampled …

2015 Annual Research Report: Greater Sage-Grouse Habitat Use Patterns And Vital Rates In The Morgan-Summit Sage-Grouse Management Area: Conservation Implications For Managers, B. Flack, Terry A. Messmer

Wildland Resources Faculty Publications

No abstract provided.

Utah Shrubland Management, Thomas A. Monaco, Kari E. Veblen, Justin Williams

Wildland Resources Faculty Publications

The Spring 2015 Newsletter highlights our study site in Park Valley, UT. The ranch where we work is owned and operated by Lance Westmoreland and family; greasewood is the targeted shrub.

Microgravity Testing Of A Phase Change Reference On The International Space Station, T. Shane Topham, Gail E. Bingham, Harri Latvakoski, Igor Podolski, Vladimir S. Sychev, Andre Burdakin

Space Dynamics Laboratory Publications

Orbital sensors to monitor global climate change during the next decade require low drift rates for onboard thermometry, which is currently unattainable without on-orbit recalibration. Phase change materials (PCM), such as those that make up the ITS-90 standard, are seen as the most reliable references on the ground and could be good candidates for orbital recalibration. Space Dynamics Lab (SDL) has been developing miniaturized phase change references capable of deployment on an orbital blackbody for nearly a decade. To determine if and how microgravity will affect the phase transitions, SDL conducted experiments with ITS-90 standard material (gallium, Ga) on the …

Evaluation Of 9,10 Anthraquinone Application To Pre-Seed Set Sunflowers For Repelling Blackbirds, Megan D. Niner, George M. Linz, Mark E. Clark

Human–Wildlife Interactions

Most nonlethal methods available for reducing blackbird (Icteridae) damage to sunflowers rely on fright responses (e.g., propane cannons, distress calls, pyrotechnics, raptor silhouettes) that birds quickly learn to ignore. Chemicals that cause taste or feeding aversions have potential to overcome the spatial and behavioral limitations of frightening methods. Anthraquinone (AQ) is an effective feeding repellent as a seed treatment to deter birds from eating freshly planted grains. In the United States, foliar application of AQ is not permitted on food crops except on small experimental plots. In August 2013, we applied 37.4 L/ha of an aqueous mix consisting of 15.1 …

Modeling The Economic Impacts Of Double-Crested Cormorant Damage To A Recreational Fishery, Stephanie A. Shwiff, Katy N. Kirkpatrick, Travis L. Devault, Steven S. Shwiff

Human–Wildlife Interactions

The double-crested cormorant (Phalacrocorax auritus) has undergone a significant range expansion in the Great Lakes area of the United States since the 1970s, negatively impacting native fish populations and sport fisheries. Effective management of wildlife requires policies and practices that quantify their economic impacts, which is often complicated by multiplier effects in the regional economy. This analysis estimates the potential direct and regional economic impacts of the cormorant to a recreational fishery. We estimated that the potential economic loss was on average $5 million to $66 million annually, as well as 66 to 929 job-years in the region …

Grass Management Regimes Affect Grasshopper Availability And Subsequently American Crow Activity At Airports, Laura A. Kennedy, Ken A. Otter

Human–Wildlife Interactions

With large expanses of open vegetation, airports serve as major attractants for numerous bird species, such as the American crow (Corvus brachyrhynchos), which can lead to high risk of bird–aircraft collision. Previous observations of large influxes of crows at the Prince George Airport (British Columbia, Canada) in July and August suggested that crows were opportunistically foraging on grasshopper (Melanoplus sp.) population eruptions in mown grass during those months. We tested whether grasshoppers were more visible (i.e., easier for crows to detect) under different grass lengths, and whether crows were preferentially attracted to these same grass lengths. Employing …

Methodology For Estimating Deer Browsing Impact, Timothy G. Pierson, David S. Decalesta

Human–Wildlife Interactions

Because there were no reliable indicators of deer browsing on tree seedling regeneration, we developed methodology that can be used to measure deer browsing impact. We compared 11 years (2002 to 2012) of annual estimates of deer density with coarse (percent-plots-no-regeneration, percent-plots-no-impact) and fine (3 levels of impact on 6 indicator seedling species) indicators within a 29,642-ha study area in northwestern Pennsylvania. Coarse and fine measures met established criteria for indicators of environmental stress (e.g., high deer density); they were predictive of stresses that can be: avoided by management; integrative with causes of stress; responsive to disturbances and changes over …

Black Bear Exclusion Fences To Protect Mobile Apiaries, Tammy E. Otto, Gary J. Roloff

Human–Wildlife Interactions

Demand for commercial bee (Apis mellifera) services recently has increased, resulting in greater use of mobile apiaries for crop pollination. When commercial apiaries are moved into areas occupied by black bears (Ursus americanus), conflicts between beekeepers and bears sometimes occur. Commercial pollination often involves moving apiaries among agricultural fields, and, thus, permanent fencing is not a viable option for reducing damage by bears. In 2010, we tested the effectiveness of 4 temporary electric fence designs for excluding black bears from bait sites in northern Michigan. We determined the effectiveness of each fence design by observing bear …

Changes In Distribution Of Canada Geese Nesting In Arkansas, M. Eliese Ronke, David G. Krementz

Human–Wildlife Interactions

The reintroduced Canada goose (Branta canadensis) population in Arkansas has grown in range and abundance in recent decades. We determined the geographic range of Arkansas resident Canada geese from 2004 to 2012 using volume contour maps from citizen science observations using eBird, a citizen science website, and hunter recovery locations from the U.S. Geological Survey Bird Banding Laboratory. Resulting maps indicate an increase in Canada goose encounters toward northwestern and southwestern Arkansas from the original relocations in the Arkansas River valley. We examined movement of Canada geese banded and recovered in Arkansas by determining the distance and angle …

Characterizing Nontarget Species Use At Bait Sites For White-Tailed Deer, Brent Bowman, Jerrold L. Belant, Dean E. Beyer Jr., Deborah Martel

Human–Wildlife Interactions

Baiting white-tailed deer (Odocoileus virginianus) has evolved into a controversial issue of wildlife management. During August–September 2012, we established a grid of 64 cameras in the Upper Peninsula of Michigan at sites baited with corn that simulated legal bait sites for white-tailed deer to characterize presence, diversity, and frequency of species use. We detected >20 species of wildlife that visited bait sites. We categorized 3,177 of 11,194 images as independent detections (i.e., species detected >1 hour apart). White-tailed deer had the greatest detection rate (47%), but overall detections of nontarget species was slightly greater (53%). Most frequent nontarget …

Soap Box Reprioritizing Avian Conservation Efforts, Travis L. Devault

Human–Wildlife Interactions

No abstract provided.

Human Diseases From Wildlife: A Review, Joe N. Caudell

Human–Wildlife Interactions

No abstract provided.

Brown Bear And Human Recreational Use Of Trails In Anchorage, Alaska, Jessica A. Coltrane, Rick Sinnott

Human–Wildlife Interactions

Anchorage, Alaska, has 301,000 human residents and hundreds of thousands of visitors each year. Anchorage also supports a viable population of brown bears (Ursus arctos). As a result, human–bear encounters are common. We used camera traps to monitor recreational trails near salmon spawning streams at 3 study sites during the summers of 2009 to 2012 to better understand daily and seasonal activity patterns of bears and humans on these trails. The more remote study sites had the least human activity and the most bear activity. Human–bear encounters were most likely to occur from July through early September due …

Spatial And Temporal Analysis Of Factors Associated With Urban Deer–Vehicle Collisions, Erin C. Mccance, Richard K. Baydack, David J. Walker, Derek N. Leask

Human–Wildlife Interactions

Increasing populations of white-tailed deer (Odocoileus virginianus) in urban areas have resulted in an increase in deer–vehicle collisions (DVCs). Deer–vehicle collisions represent a human–wildlife conflict of serious concern, given that they result, most notably, in significant risk to human safety, deer mortality, and costly vehicle damage. Although many communities have developed databases that track the frequency and location of DVCs, there is a need for analysis of the factors that affect DVC locations in urban areas. Data on deer movement patterns across roads in urban areas are valuable to reduce the occurrence of DVCs on existing roads and …

In The News, Jason Matthews, Joe N. Caudell

Human–Wildlife Interactions

No abstract provided.

Parallel Universes? Increasing Connections Between Ipm And Wdm, Lynn Braband

Human–Wildlife Interactions

Managing damage by wild vertebrates often is important, and wildlife damage management (WDM) has incorporated important tenets of integrated pest management (IPM). However, largely separate academic backgrounds have nurtured the IPM and WDM communities. The controversial “hot button” topics have tended to differ. While WDM research and outreach have received some IPM funding, and wildlife studies occasionally appear in IPM journals, attendance at infrequent wildlife sessions during IPM meetings has been sparse. The objectives of this paper are to review important examples of collaboration, and evaluate possibilities for future synergy between these related disciplines.