Digital Commons Network^™

Soil Health And Water Conservation, Tony Richards

Spring Runoff Conference

What are Healthy Soils? 

• Stable 
• Functional 
• Productive 
• Resilient 

Great Salt Lake Model Depletion, Katherine Wright

Spring Runoff Conference

When does water leasing make sense? Using New Information to Make Better Leases.

Lease, but only if it makes sense.

• Farmers have a legal right to use water on their farms for agriculture.
• Leasing might be a good economic decision for you, but not your neighbor.
• Leasing is voluntary, the purpose of this presentation is to explain the benefits of leasing and give you the information you need to decide if it is right for you. 

Canada Thistle (Cirsium Arvense) Identification And Control, Caitlin Henderson, Robert Nelson Schaeffer, Corey Ransom

All Current Publications

Cirsium arvense is an invasive perennial weed adaptable to a wide range of habitats. Since its arrival in North America in the 1600s, it has spread throughout much of the country. It has become prevalent in rangelands and disturbed areas in the Intermountain West, displacing native plant species, reducing crop yields, and affecting pasture quality. This fact sheet outlines how to identify Canada thistle, its life cycle, and how to manage it through cultural, mechanical, biological, and chemical control.

Genomic-Transcriptomic Analysis Identifies The Syrian Hamster As A Superior Animal Model For Human Diseases, Chuchu Wang, Zhenguo Cheng, Jinxin Miao, Xia Xue, Yunshu Dong, Li Zhao, Haoran Guo, Jianyao Wang, Zhizhong Wang, Shuangshuang Lu, Guangming Fang, Ying Peng, Yafei Zhai, Zhongxian Zhang, Dongling Gao, Zhimin Wang, Pengju Wang, Lirong Zhang, Louisa S. Chard Dunmall, Jun Wang, Wenxue Tang, Xiaowei Li, Zhongren Ding, Xiaoyan Zhao, Ling Li, Nicholas R. Lemoine, Zhongde Wang, Daniel Tonge, Wenjie Tan, Jianzeng Dong, Yaohe Wang

Animal, Dairy, and Veterinary Science Faculty Publications

Background The Syrian hamster (Mesocricetus auratus) has shown promise as a human diseases model, recapitulating features of different human diseases including COVID-19. However, the landscape of its genome and transcriptome has not been systematically dissected, restricting its potential applications.

Results Here we provide a complete analysis of the genome and transcriptome of the Syrian hamster and found that its lineage diverged from that of the Chinese hamster (Cricetulus griseus) around 29.4 million years ago. 21,387 protein-coding genes were identified, with 90.03% of the 2.56G base pair sequence being anchored to 22 chromosomes. Further comparison of the …

Elevated Extinction Risk In Over One-Fifth Of Native North American Pollinators, Tara Cornelisse, David W. Inouye, Rebecca E. Irwin, Sarina Jepsen, Jonathan R. Mawdsley, Margaret Ormes, Jaret Daniels, Diane M. Debinski, Terry Griswold, John Klymko, Michael C. Orr, Leif Richardson, Nicole Sears, Dale Schweitzer, Bruce E. Young

Biology Faculty Publications

Pollinators are critical for food production and ecosystem function. Although native pollinators are thought to be declining, the evidence is limited. This first, taxonomically diverse assessment for mainland North America north of Mexico reveals that 22.6% (20.6 to 29.6%) of the 1,579 species in the best-studied vertebrate and insect pollinator groups have elevated risk of extinction. All three pollinating bat species are at risk and bees are the insect group most at risk (best estimate, 34.7% of 472 species assessed, range 30.3 to 43.0%). Substantial numbers of butterflies (19.5% of 632 species, range 19.1 to 21.0%) and moths (16.1% of …

Bryce Canyon Aspen: Recent Trends, Future Actions, Paul C. Rogers

Aspen Bibliography

In cooperation with Bryce Canyon National Park, we undertook a survey of quaking aspen (Populus tremuloides Michx.) conditions throughout the Park with the intention of better understanding conditions and prescribing corrective measures where needed. There are clear disparities within the Park between sustainable aspen conditions and failing stands. Based on condition of mature trees, but most importantly regeneration and recruitment of juvenile stems, most aspen forests within Bryce Canyon are in poor condition. Aspen recruitment—generally sapling-sized trees that have survived browsing ungulates—is the most important metric of future stand resilience and here we found 83% of all aspen sample …

Herbivory In A Low Arctic Wetland Alters Intraspecific Plant Root Traits With Consequences For Carbon And Nitrogen Cycling, Emily A. Chavez, Jaron Adkins, Bonnie G. Waring, Karen H. Beard, Ryan T. Choi, Lindsay Miller, Taylor Saunders, Trisha B. Atwood

Wildland Resources Faculty Publications

1. High latitude wetlands are ecologically important ecosystems due to their large carbon (C) storage capacity and because they serve as breeding and nesting habitat for large populations of migratory birds. Goose herbivory in wetland meadows affects leaf chemical and morphological traits and also influences soil properties by increasing soil temperature and depositing faeces. Grazing-induced changes to above-ground traits and soil properties impact C cycling, but the influence of grazing on root-mediated C and nitrogen (N) cycling has not been explored.

2. We investigated how goose herbivory in a low-Arctic coastal wetland in western Alaska affected root morphological, physiological and chemical traits …

An Alternative To Biliverdin, Mesobiliverdin Ixα And Mesobiliverdin-Enriched Microalgae: A Review On The Production And Applications Of Mesobiliverdin-Related Products, Naveena Poudyal, Jon Y. Takemoto, Yuan-Yu Lin, Cheng-Wei T. Chang

Chemistry and Biochemistry Student Research

Despite attracting interest for decades due to its anti-inflammatory and antioxidant capabilities, the use of biliverdin IXα (BV) in medicine and agriculture is hampered by uncertain purity and limited availability. A significant amount of effort has been devoted to the production and application of BV, but with limited success. Mesobiliverdin IXα (MBV), a natural BV analog derived from microalgae, offers a path to overcome the limitations of BV. MBV production is scalable, and it can be obtained at high purity. MBV and BV share important structural features (e.g., bridging propionate groups) and both are substrates of biliverdin reductase A (BVRA), …

Thriving Hives: Propolis - Harvest And Usage, Brynn Meredith, Teresa Hunsaker, Andree' Walker Bravo

All Current Publications

One of the lesser-known substances produced by honeybees is something called propolis. Propolis is a type of adhesive that bees use to construct their hives and keep unwanted invaders out. Propolis is difficult to collect and process but can be beneficial, as it has many useful applications. This fact sheet addresses harvesting and using propolis.

Forb Diversity Globally Is Harmed By Nutrient Enrichment But Can Be Rescued By Large Mammalian Herbivory, Rebecca A. Nelson, Lauren L. Sullivan, Erika I. Hersch-Green, Eric W. Seabloom, Elizabeth T. Borer, Pedro M. Tognetti, Peter B. Adler, Lori Biederman, Miguel N. Bugalho, Maria C. Caldeira, Juan P. Cancela, Luísa G. Carvalheiro, Jane A. Catford, Chris R. Dickman, Aleksandra J. Dolezal, Ian Donohue, Anne Ebeling, Nico Eisenhauer, Kenneth J. Elgersma, Anu Eskelinen, Catalina Estrada, Magda Garbowski, Pamela Graff, Daniel S. Gruner, Nicole Hagenah, Sylvia Haider, W. Stanley Harpole, Yann Hautier, Anke Jentsch, Nicolina Johanson, Sally E. Koerner, Lucíola S. Lannes, Andrew S. Macdougall, Holly Martinson, John W. Morgan, Harry Olde Venterink, Devyn Orr, Brooke B. Osborne, Pablo L. Peri, Sally A. Power, Xavier Raynaud, Anita C. Risch, Mani Shrestha, Nicholas G. Smith, Carly J. Stevens, G. F. Ciska Veen, Risto Virtanen, Glenda M. Wardle, Amelia A. Wolf, Alyssa L. Young, Susan P. Harrison

Wildland Resources Faculty Publications

Forbs (“wildflowers”) are important contributors to grassland biodiversity but are vulnerable to environmental changes. In a factorial experiment at 94 sites on 6 continents, we test the global generality of several broad predictions: (1) Forb cover and richness decline under nutrient enrichment, particularly nitrogen enrichment. (2) Forb cover and richness increase under herbivory by large mammals. (3) Forb richness and cover are less affected by nutrient enrichment and herbivory in more arid climates, because water limitation reduces the impacts of competition with grasses. (4) Forb families will respond differently to nutrient enrichment and mammalian herbivory due to differences in nutrient …

A Checklist Of The Bees Of Utah, Joseph S. Wilson, Anthony Hunsaker, Terry L. Griswold, Olivia Messinger Carril

Biology Faculty Publications

Understanding bee distributions is essential to protecting these vital pollinators. Since conservation efforts and policies are often made at the state level, maintaining state-specific bee species lists can aid conservationists and policy makers. While several North American state- and province-level bee species lists have been published, few exist for the arid western states, where bee diversity tends to be higher. Here we provide a bee species list for Utah, compiled from online occurrence records from the Symbiota Collection of Arthropods Network (SCAN) and specimen records housed in the USDA-ARS Pollinating Insect Research Unit (BBSL). In total we document 1167 bee …

Redefining The Limits Of Functional Continuity In The Early Evolution Of P-Loop Ntpases, Andrey O. Demkiv, Saacnicteh Toledo-Patiño, Encarnación Medina-Carmona, Andrej Berg, Gaspar P. Pinto, Antonietta Parracino, Jose M. Sanchez-Ruiz, Alvan C. Hengge, Paola Laurino, Liam M. Longo, Shina Caroline Lynn Kamerlin

Chemistry and Biochemistry Faculty Publications

At the heart of many nucleoside triphosphatases is a conserved phosphate-binding sequence motif. A current model of early enzyme evolution proposes that this six to eight residue motif could have sparked the emergence of the very first nucleoside triphosphatases—a striking example of evolutionary continuity from simple beginnings, if true. To test this provocative model, seven disembodied Walker A-derived peptides were extensively computationally characterized. Although dynamic flickers of nest-like conformations were observed, significant structural similarity between the situated peptide and its disembodied counterpart was not detected. Simulations suggest that phosphate binding is nonspecific, with a preference for GTP over orthophosphate. Control …

Creating Sustainable School And Home Gardens: Organic Pest Management, Ruby Mohr, Kathy Cabe Trundle, Rita Hagevik

All Current Publications

This fact sheet on organic pest management outlines sustainable gardening practices that promote ecological balance and biodiversity. It defines organic pest management as a proactive method, using natural insecticides like sulfur and neem oil, along with unique pest control strategies such as beer traps and cinnamon repellents. Additionally, it highlights plants like mint and marigolds that repel harmful pests while attracting beneficial insects. By implementing these approaches, gardeners can protect crops sustainably, enhance soil health, and reduce reliance on synthetic pesticides, thus supporting a healthier food system.

Building Relationships For Meaningful Co-Created Indigenous Climate Education, B. Hanson, R. Mccann, D. Smiley, S. Hinck, A. R. Archie, N. Butler

Environment and Society Student Research

This project involved a multicultural team collaboratively co-creating a climate change module by and for Indigenous people. Embracing the framework of cultural humility, we recognized the bidirectional learning inherent in the project and its role in mitigating power dynamics within the team. This endeavor underscored the significance of transparency, effective communication, respect, reciprocity, trust building, and sensitivity to cultural contexts. Our findings emphasized the need for locally grounded programs that echo local traditional wisdom. We discovered that fostering an environment conducive to active listening and patience is pivotal in establishing a secure space. Our research affirms the equal validity and …

Earth Orbital Rhythms Links Timing Of Deccan Trap Volcanism Phases And Global Climate Change, Thomas Westerhold, Edoardo Dallanave, Donald Penman, Blair Schoene, Ursula Röhl, Nikolaus Gussone, Junichiro Kuroda

Geosciences Faculty Publications

At the end of the Cretaceous, the massive Deccan trap (DT) volcanic eruptions are regarded as the primary driver of global climate deterioration. Accurate age models are key to unravel the sequence of events related to DT volcanism onset and effects on the global climate system. We establish a direct geochemical link between DT volcanism as recorded in marine osmium isotopic data and global climate change documented in benthic foraminifera carbon and oxygen isotope records. Based on our state-of-the-art astronomically calibrated age model, two major shifts in marine ¹⁸⁷Os/¹⁸⁸Os at 66.49 and 66.28 million years ago are …

Factor Structure And Longitudinal Changes In Bilinguals’ Oral Narratives Production: Role Of Language Exposure, Language-Domain Proficiency, And Transfer, Joseph Hin Yan Lam, Molly Ann Leachman, Cecilia Del Carmen Perez, Amy S. Pratt, Elizabeth D. Peña, Lisa M. Bedore, Ronald B. Gillam

Communicative Disorders and Deaf Education Faculty Publications

This paper examined the interaction between narrative performance, language exposure, and standardized measures of morphosyntax and semantics, in bilingual children tested two times, 1 year apart. We aimed to 1) identify the factor structure of oral narrative measures, and 2) examine the direction and strength of the effects of (i) language exposure and (ii) the relationship between language domains and narrative production. A total of 143 Spanish (L1)-English (L2) bilingual children completed a battery of oral narrative and oral language proficiency assessments in Spanish and English at two time points (kindergarten and Grade 1). Factor analyses yielded an identical two-factor …

Simplification Of Woody Plant Trait Networks Among Communities Along A Climatic Aridity Gradient, Camila D. Medeiros, Santiago Trueba, Christian Henry, Leila R. Fletcher, James A. Lutz, Rodrigo Méndez‐Alonzo, Nathan J. B. Kraft, Lawren Sack

Wildland Resources Faculty Publications

1. Plant ecological strategies are shaped by numerous functional traits and their trade-offs. Trait network analysis enables testing hypotheses for the shifting of trait correlation architecture across communities differing in climate and productivity.

2. We built plant trait networks (PTNs) for 118 species within six communities across an aridity gradient, from forest to semi-desert across the California Floristic Province, based on 34 leaf and wood functional traits, representing hydraulic and photosynthetic function, structure, economics and size. We developed hypotheses for the association of PTN parameters with climate and ecosystem properties, based on theory for the adaptation of species to low …

Changing Fire Regimes In The Great Basin Usa, Eva K. Strand, Kori Blankenship, Corey Gucker, Mark Brunson, Eugénie Montblanc

Aspen Bibliography

Wildfire is a natural disturbance in landscapes of the Western United States, but the effects and extents of fire are changing. Differences between historical and contemporary fire regimes can help identify reasons for observed changes in landscape composition. People living and working in the Great Basin, USA, are observing altered fire conditions, but spatial information about the degree and direction of change and departure from historical fire regimes is lacking. This study estimates how fire regimes have changed in the major Great Basin vegetation types over the past 60 years with comparisons to historical (pre-1900) fire regimes. We explore potential …

Reviews And Syntheses: Variable Inundation Across Earth’S Terrestrial Ecosystems, James Stegen, Amy J. Burgin, Michelle H. Busch, Joshua B. Fisher, Joshua Ladau, Jenna Abrahamson, Lauren Kinsman-Costello, Li Li, Xingyuan Chen, Thibault Datry, Nate Mcdowell, Corianne Tatariw, Anna Braswell, Jillian M. Deines, Julia A. Guimond, Peter Regier, Kenton Rod, Edward K. P. Bam, Etienne Fluet-Chouinard, Inke Forbrich, Kristin L. Jaeger, Teri O’Meara, Tim Scheibe, Erin Seybold, Jon N. Sweetman, Jianqiu Zheng, Daniel C. Allen, Elizabeth Herndon, Beth A. Middleton, Scott Painter, Kevin Roche, Julianne Scamardo, Ross Vander Vorste, Kristin Boye, Ellen Wohl, Margaret Zimmer, Kelly Hondula, Maggi Laan, Anna Marshall, Kaizad F. Patel

Watershed Sciences Faculty Publications

The structure, function, and dynamics of Earth's terrestrial ecosystems are profoundly influenced by how often (frequency) and how long (duration) they are inundated with water. A diverse array of natural and human-engineered systems experience temporally variable inundation whereby they fluctuate between inundated and non-inundated states. Variable inundation spans extreme events to predictable sub-daily cycles. Variably inundated ecosystems (VIEs) include hillslopes, non-perennial streams, wetlands, floodplains, temporary ponds, tidal systems, storm-impacted coastal zones, and human-engineered systems. VIEs are diverse in terms of inundation regimes, water chemistry and flow velocity, soil and sediment properties, vegetation, and many other properties. The spatial and temporal …

What To Do Now That You've Trapped A Nuisance Wild Animal, Cory Farnsworth, S. Nicole Frey

All Current Publications

This fact sheet outlines specific guidelines for legally responding to nuisance wild animals. Management best practices, animal use, euthanasia, and proper disposal are discussed.

There May Be A Safer Treatment Against A Virus That Can Cause Birth Defects And Hearing Loss, Kade Robison

Research on Capitol Hill

CMV is the leading cause of non-genetic birth defects and hearing loss.

Hagfish Protein Models Of Heart Tissue Reveal Processes Of Diabetes, Maelyn Andreasen

Research on Capitol Hill

Diabetic cardiomyopathy impairs and damages heart tissue through chronic exposure to hyperglycemia, or high blood sugar, in diabetic individuals. 

Studying the disease in heart tissue is difficult, so we set out to create a three-dimensional heart model that we can study under these hyperglycemic conditions.

A New Crispr System Uses Energy Storage Indiscriminately, Brendon Guinn

Research on Capitol Hill

CRISPR systems are Immune systems used by bacteria to defend against viruses. Recently, tools such as CRISPR Cas9 that are derived from CRISPR systems have been developed as a powerful tool to treat disease. 

Here we are studying a different CRISPR system related to the one used to develop the Cas9 tool. We study this system to discover new proteins that may be used to develop tools to cure diseases and diversify our arsenal of disease-fighting genetic sequences. 

Genetic Engineering In Alpacas May Unlock Cures For Currently Incurable Human Disease, James Cisneros

Research on Capitol Hill

We aimed to establish laparoscopic ovum pickup (L-OPU) techniques in alpaca to retrieve oocytes for in vitro maturation and fertilization. Our project successfully retrieved and matured alpaca oocytes in vitro, a crucial step toward genetic engineering. Next, we will apply CRISPR-Cas9 to deactivate the IGM gene in fertilized embryos, aiming to enhance HCAb production. This will lay the foundation for humanizing these antibodies, making them viable for therapeutic use in human medicine.

Recent Developments In Heterologous Expression Of Cellulases Using The Pichia Pastoris Expression System: A Comprehensive Literature Review, Nazish Muzaffar, Abdur Raziq, Muhammad Waseem Khan, Niaz Muhammad Khan, Bushra Shahid, Anbareen Gul, Hayat Ullah

Biological Engineering Student Research

Cellulosic biomass is considered an important and sustainable source of renewable energy, which needs a complex mixture of different enzymes for its degradation. After amylase, cellulases are the second most important enzymes, gain more importance due to their broad range of applications at the industrial level, and are considered more economical and environmentally friendly; researchers have focused more on the production of cellulase with its higher expression rate and low cost. Pichia pastoris, a methylotrophic yeast strain, has a more effective and well-established system for the production of heterologous proteins, particularly for industrial enzymes. Moreover, its readily achievable high-density …

Nutrient Limitation And Seasonality Associated With Phytoplankton Communities And Cyanotoxin Production In A Large, Hypereutrophic Lake, Gabriella M. Lawson, Jakob L. Young, Zachary T. Aanderud, Erin F. Jones, Samuel Bratsman, Jonathan Daniels, Madeleine P. Malmfeldt, Michelle A. Baker, Benjamin W. Abbott, Scott Daly, Hans W. Paerl, Greg Carling, Brian Brown, Raymond Lee, Rachel L. Wood

Biology Faculty Publications

Though freshwater harmful algal blooms have been described and studied for decades, several important dynamics remain uncertain, including the relationships among nutrient concentrations, phytoplankton growth, and cyanotoxin production. To identify when and where nutrients limit phytoplankton, cyanobacteria, and cyanotoxins, we conducted in situ bioassay studies. We added nitrogen (N), phosphorus (P), or N + P across various seasons in water collected from three locations across Utah Lake, one of the largest freshwater lakes in the western U.S. This shallow, hypereutrophic lake provides a powerful testbed for quantifying nutrient-growthtoxin interactions. We assessed a range of parameters over time, including photopigment concentrations, …

Drought Resilience And Legacy Effects In Two Forest Tree Species On Loess Plateau Of China: Growth And Water-Use Efficiency Under Different Drought Conditions, Lu Han, J. Julio Camarero, Guodong Jia, Zhiqiang Zhang, Lixin Chen

Aspen Bibliography

As droughts become more frequent and severer, understanding tree resilience and its role in mediating drought legacy effects (LEs) is critical for predicting forest ecosystem responses to future droughts and informing forest management. Both Pinus tabuliformis and Populus davidiana are widely distributed in the Loess Plateau region of western China and play important roles in provision of ecosystem services. In this study we quantified the LEs and resilience, including resistance (Rt) and recovery (Rc), of radial growth (BAI, basal area increment) and intrinsic water use efficiency (iWUE) of the two species, determined the external and internal factors influencing Rt and …

Replacement Of Monensin With A Proprietary Tannin-Blend Additive In Calf-Fed Holstein Steer Diets, Sydney M. Bowman-Schnug, Luke K. Fuerniss, Joe D. Cameron, Jonathon L. Beckett, Muhammad Ahsin, Stephan Van Vliet, Guy D. Hufstedler, Bradley J. Johnson

Nutrition, Dietetics, and Food Sciences Faculty Publications

A proprietary tannin blend was evaluated as a potential ionophore replacement considering traits of feedlot cattle growth performance, carcass traits, and health. Holstein steers (n = 1450; initial shrunk body weight (SBW) = 141.6 ± 34.2 kg.) were blocked by origin and randomly assigned to receive a finishing diet containing one of two treatments: 1) 14,500 mg per head daily of Silvafeed ByProX (SBPX; ByPro/BX blend, Silvateam S.p.A, San Michele Mondovì, Italy) or 2) 180 mg per head daily of monensin (MON; Rumensin™ 90, Elanco, Greenfield, IN). Steers were on trial for 341 ± 11 days. Pen was the …

Exploring The Validity Of Adolescent Responses To A Measure Of Psychological Flexibility And Inflexibility, Caleb D. Farley, Tyler L. Renshaw

Psychology Student Research

Validating measures of psychological flexibility (PF) and psychological inflexibility (PI) has occurred in multiple adult samples, but little research has validated PF and PI measures with adolescents. This manuscript describes two studies exploring the validity of responses to the Multidimensional Psychological Flexibility Inventory (MPFI) with two samples of adolescents. The first study used exploratory factor analyses on responses to the MPFI with a sample of 16–17-year-olds (N = 249). The results yielded a reduced and simplified measurement model that consisted of two general factors: one for PF and the other for PI. These exploratory findings were further investigated with …

Restore The Shore: A Guide To Lakeshore Revegetation In The Great Basin, Jes V. Braun, Rae Robinson, Annie L. Henry, Karin M. Kettenring

All Current Publications

Lakeshore vegetation supports many valuable aspects of lake ecosystems: foraging areas for birds, rearing grounds for fish, nutrient cycling, carbon storage, and aesthetic, cultural, and spiritual values. Yet, the vegetation of many lakeshores has been lost or heavily impacted by humans. What can be done to restore lakeshore vegetation to ensure that lakes remain healthy for future generations? In this guide, we summarize best practices for lakeshore revegetation (i.e., the process of actively reintroducing vegetation, usually native species, to a restoration site through seeding and planting) in the Great Basin.