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Tremblings, August 2017, Western Aspen Alliance

Tremblings

Uphill Battle to Restore Aspen in the Sierra

John-Pascal Berrill

Being a forest owner and manager, I’m interested in topics important to local forest managers: uneven-aged management and restoration. Maybe I just want the complete opposite of the plantation forestry back home in New Zealand. Moving to California satisfied that, with complex disturbance, social, and policy issues surrounding natural resource management of mixed stands. And with tree species that sucker and sprout – a challenge!

Bridging Post-Wildfire Communication Gaps Between Managers, Researchers, And Local Communities, Including A Biological Soil Crust Case Study, Hilary Louise Whitcomb

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Immediately after a wildfire land managers act quickly to protect water supplies, soil stability, habitat, and forage. We don't currently understand how managers make trade-off decisions between social, political, and ecological factors in these tight timelines or if they are able to use new science. We do know ecosystems often benefit from local engagement, and new, scientifically-grounded methods that improve restoration efforts are needed. As post-wildfire timelines don’t often allow for outside input, I asked managers what they and stakeholders think about post-wildfire projects and what managers think about new science. I asked local citizens what they think about postwildfire …

Seasonal Development Of The Biological Control Agent Of Dalmatian Toadflax, Mecinus Janthiniformis (Curculionidae: Coleoptera), In Utah: Phenology, Overwintering Success, And Mortality, Samantha A. Willden

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

By outcompeting desirable vegetation, invasive weeds can dominate field crops and rangelands, drastically reducing yield and land value. One option in controlling the impact and spread of such weeds is reuniting them with their natural insect herbivores, a process called biological control. When successful, biocontrol can be the cheapest way to provide long-term control of invasive weeds, but continual monitoring of insect and weed activity is required to ensure success.

Dalmatian toadflax is an invasive weed that occurs widely throughout the northwestern U.S., and that is spreading south each year to warmer and drier regions, including sites in Utah. Although …

Estimating Accuracy Of Personal Identifiable Information In Integrated Data Systems, Amani "Mohammad Jum'h" Amin Shatnawi

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Both government agencies and private companies rely on the collection of personal data on an ever-increasing scale. Out of necessity, person data include Personal Identifiable Information (PII), which is information that could potentially identify a specific individual. Many of these data would be integrated, so data analyst, policy makers or corporate officers can use it to make decisions or get a conclusion. Integrating data in a heterogeneous database environment create a need to estimate the accuracy of that data; without a valid assessment of accuracy there is a risk of coming with incorrect conclusions or making bad decision based on …

Maternal Diabetes, Related Biomarkers And Genes, And Risk Of Orofacial Clefts, Tiwaporn Maneerattanasuporn

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Orofacial clefts (OFCs) are among the most common congenital birth defects and are characterized by incomplete development of the lip or the palate or both. The lip and palate develop separately at different times during the first trimester of pregnancy. The etiology of OFCs is multifactorial and includes a combination of genetic and environmental factors. This project aims to examine role of maternal diabetes mellitus in orofacial clefts through studies of medical histories, biomarkers, and genes.

In a study of Utah birth certificates, mothers with pre-existing diabetes and gestational diabetes mellitus (GDM) had an increased risk of OFCs, and obese …

Effect Of An Aquatic Environment On Dual-Task Performance In Older Adults, Devin Patterson

All Graduate Plan B and other Reports, Spring 1920 to Spring 2023

Background: Older adults tend to have difficulty maintaining balance. It has been suggested that the aquatic environment may provide a safer and more challenging alternative to land for balance training. It has also been suggested that the performance of a dual cognitive-balance task paradigm may increase the competition for cortical resources needed to maintain balance. There is a need to evaluate the influence of an aquatic environment on the performance of a combined cognitive and motor task paradigm in older adults. Purpose: To assess the effects of an aquatic environment on the performance of cognitive and motor tasks in older …

Nutritional, Endocrine, And Social Influences On Reproductive Physiology At The Origins Of Social Behavior, Karen M. Kapheim

Biology Faculty Publications

Understanding the evolutionary origins of social behavior in insects requires understanding the physiological basis for reproductive plasticity. Solitary bees and wasps or those living in small, flexible societies will be key to understanding how conserved pathways have evolved to give rise to reproductive castes. Nutrient-sensing and endocrine pathways are decoupled from reproduction in some life stages of social insects. Heterochrony, particularly as it is related to diapause physiology, may be an important mechanism by which this decoupling occurs. Additional research is needed to understand how these pathways became sensitive to cues from the social environment. Future research targeting species with …

Incidental Vocabulary Acquisition In Middle School: An Examination Of Three Instructional Conditions, David B. Lee

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The importance of vocabulary knowledge gained through incidental learning is well documented. The growth of incidental vocabulary knowledge is especially crucial for middle school students due to the complex words encountered in their studies. However, research on incidental vocabulary acquisition for middle school students is lacking. The purpose of this study was to compare the relative effectiveness of three instructional conditions (reading, writing, and reading and writing) on incidental vocabulary acquisition and retention with middle school students in an English as a first language (L1) environment.

In this within subjects repeated measure study, 263 eighth-grade participants received treatment in three …

Integrating Black Bear Behavior, Spatial Ecology, And Population Dynamics In A Human-Dominated Landscape: Implications For Management, Jarod D. Raithel

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The American black bear (Ursus americanus) has made a robust recovery within the human-dominated, social-ecological systems characterizing the Mid-Atlantic United
States. For example, in northwestern New Jersey (NJ), USA, black bear abundance increased from an estimated 450-500 in 1996 to 3200-3400 in 2010. Bear recovery
coincided with increasing human populations, coupled with shifting settlement patterns toward sprawling suburban communities. Consequently, conflicts have rapidly proliferated over the past three decades and resulted in >1400 incidents of verified property damage, >400 livestock kills, >250 pet attacks and/or kills, seven human attacks and one human fatality since 2001. The New Jersey …

Facilitation Of Nanoscale Thermal Transport By Hydrogen Bonds, Lin Zhang

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Thermal transport performance at the nanoscale and/or of biomaterials is essential to the success of many new technologies including nanoelectronics, biomedical devices, and various nanocomposites. Due to complicated microstructures and chemical bonding, thermal transport process in these materials has not been well understood yet. In terms of chemical bonding, it is well known that the strength of atomic bonding can significantly affect thermal transport across materials or across interfaces between materials. Given the intrinsic high strength of hydrogen bonds, this dissertation explores the role of hydrogen bonds in nanoscale thermal transport in various materials, and investigates novel material designs incorporating …

Resolving Spatial And Temporal Variability In Dissolved Organic Matter Characteristics Within Combined Agricultural And Stormwater Conveyances, Bryce A. Mihalevich

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

In many urban areas, stormwater runoff can threaten the ecological health of streams and downstream water bodies. Due to the increased impervious nature of urban landscapes, runoff is more “flashy” and as a result, high concentrations of pollutants can be transported in shorter periods of time than in more natural environments. One pollutant of concern is dissolved organic matter (DOM). DOM is important within aquatic ecosystems, but excess amounts can cause depletion in dissolved oxygen concentrations and can negatively affect aquatic organisms. This study investigated changes in DOM quantity and sources within the Northwest Field Canal (NWFC), an urban water …

Leafrollers In Fruit Orchards (Lepidopters: Tortricidae), Diane G. Alston, Marion Murray

All Current Publications

Leafrollers are a type of caterpillar that may roll or tie leaves together to form a protective shelter. They feed on the leaves and fruits of host plants. This fact sheet describes them, the crop injury they cause, their orchard preferences, monitoring, treatment timing, and management.

Writing Attitudes And Practices Of Content Area Teachers After Participating In The Central Utah Writing Project Summer Institute, Joseph P. Anson

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This study of four case studies looks at how secondary math, music, science, and social studies teachers' attitudes and classroom practices were affected by their participation in the Central Utah Writing Project (CUWP) summer institute. Participant interviews, observations, and artifacts were analyzed by looking at themes for effective professional development: a participant's personal interpretation of the experience (phenomenon), construction of one's own learning, active learning/participation in the professional development, the inclusion of authentic tasks, collaborative support community, inclusion of prior knowledge and/or experience, self-efficacy regarding one's own writing and the teaching of writing, motivation as a teacher, motivation as a …

Using Silkworms As A Host To Spin Spider Silk-Like Fibers, Xiaoli Zhang

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Using silkworms as the potential host to spin spider silk-like fibers is an area of intense research world-wide. The conventional methods used to create transgenic silkworms hosting spider silk-like gene limits the incorporation of spider silk-like protein and do not improve the mechanical performance of the composite silkworm/spider silk fibers. In this dissertation, synthetic spider ampullate genes were incorporated into the precise site of the fibroin heavy chain or light chain using the latest genome editing technology CRISPR/cas9 guided non-homologous end joining as opposed to conventional random integration using transposon-based piggyBac system. These protocols, with extensive applicability to other silkworm …

Drip Irrigation For Commercial Vegetable And Fruit Production, Tiffany Maughn, Niel Allen, Dan Drost

All Current Publications

Drip irrigation is a highly efficient irrigation method well suited to many fruit and vegetable row crops. Drip tubing or tape discharges water to the soil through emitters positioned close to the plant. The drip tubing can be placed uncovered on the soil surface, under plastic mulch, buried in the soil, or suspended above the ground (e.g., on a trellis system). Water application rate is relatively low and irrigations are usually frequent. Properly designed and maintained drip-irrigation systems can have benefits that help increase the profitability of crop production.

Aphid Pests On Vegetables, Cami Cannon, Bonnie Bunn, Erin Petrizzo, Diane G. Alston, Marion Murray

All Current Publications

This fact sheet provides information on four of the most common aphids that are pests of vegetable crops in Utah: green peach aphid, potato aphid, melon or cotton aphid, and cabbage aphid.

Collection Of Biological Material For Commercial Genomic Testing In Beef, Matthew D. Garcia, Kevin Heaton, Linden Greenhalgh

All Current Publications

This fact sheet describes collecting biological material for commercial genomic testing of beef cattle. It includes a description of materials needed, methods of collecting including blood, ear notching, or tissue collection, and how to ship and store samples.

Comparison Of Chikungunya Virus Strains In Disease Severity And Susceptibility To T-705 (Favipiravir), In Vitro And In Vivo, Makda Gebre

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Chikungunya is a mosquito-transmitted disease caused by Chikungunya virus (CHIKV). Symptoms of Chikungunya include debilitating joint pain and swelling, fever and rash. CHIKV was first discovered in 1953 in Tanzania, and has since caused periodic outbreaks of disease. The virus reemerged recently in 2004 and has since spread around the world affecting more than 3 million people. The different strains of CHIKV have been grouped into three phylogenetic clades: West African, Asian and East/Central/South African (ECSA). There are no FDA approved medicines or vaccines used to treat or prevent CHIKV infection. The antiviral drug, T-705 (commercially known as Favipiravir), has …

A Comparison Of Five Statistical Methods For Predicting Stream Temperature Across Stream Networks, Maike F. Holthuijzen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The health of freshwater aquatic systems, particularly stream networks, is mainly influenced by water temperature, which controls biological processes and influences species distributions and aquatic biodiversity. Thermal regimes of rivers are likely to change in the future, due to climate change and other anthropogenic impacts, and our ability to predict stream temperatures will be critical in understanding distribution shifts of aquatic biota. Spatial statistical network models take into account spatial relationships but have drawbacks, including high computation times and data pre-processing requirements. Machine learning techniques and generalized additive models (GAM) are promising alternatives to the SSN model. Two machine learning …

Understanding The Biology Of Clover Root Curculio And Improving Their Management Using Biofumigation In Alfalfa, Steven J. Price

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Clover root curculio (CRC) is a pest of alfalfa where larvae feed belowground damaging alfalfa roots. Regional knowledge of CRC activity and biology is limited making the development of pest management strategies difficult. One potential management technique for soil-dwelling pests is the use of biofumigant containing cover crops. Biofumigation can affect the survival and behavior of pest insects. However, biofumigant crops have not been evaluated against CRC or as a rotational crop compatible with alfalfa. The goals of this research were to determine 1) phenology, population sizes, and root damage severity of CRC occurring in the Intermountain region and 2) …

Natural And Anthropogenic Effects On Life History Characteristics In The Side-Blotched Lizard (Uta Stansburiana), Geoffrey David Stuart Smith

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Survival is a prerequisite for successful reproduction, and is thus intertwined with fitness. Some physiological systems can improve survival, like the immune system, but compete with other processes for resources. Because animals evolved with resource limitation, it is important to understand how these resource-allocation decisions are made. To meet this end, I performed four investigations addressing how life-history characteristics shift in side-blotched lizards (Uta stansburiana) using laboratory studies and multi-year field sampling. First, I measured metabolic rates in response to different immune challenges and different energy states in male lizards. I found that, surprisingly, cutaneous biopsies were associated …

Quantifying Riverbed Sediment Using Recreational-Grade Side Scan Sonar, Daniel Hamill

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The Colorado River in Glen, Marble, and Grand Canyons is subject to a complex regulatory framework, including the Colorado River Compact, the Endangered Species Act, and the Grand Canyon Protection Act of 1992. Physical, biological, and cultural resources are extensively monitored by the Glen Canyon Dam Adaptive Management Program (GCDAMP) to assess the effect of Glen Canyon Dam (GCD) operations on the downstream environment. The GCDAMP consists of a diverse group of stakeholders who identify priority resources and agree upon water releases at GCD. Large expenditures of money have been devoted to monitoring physical and biological resources in Grand Canyon. …

The Role Of Utah Farmers In Farm To School Programming, John L. Hawley

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

This purpose of this study was to describe Utah farmers’ role in farm to school (FTS) programming and their interest in institutional marketing of local foods. The researcher sent a survey to farmers belonging to the Utah Farm Bureau to discover the role they play in FTS in Utah.

Respondents held positive attitudes toward FTS programming and agreed that building relationships with community members and increasing awareness of local food were benefits. They cited a lack of information about schools seeking to purchase local products and restriction of growing seasons as barriers to their participation in FTS. They displayed their …

Enzymatic Synthesis Of Chlorogenic Acid Glucoside Using Dextransucrase And Its Physical And Functional Properties, Seung-Hee Nam, Jin-A Ko, Young-Jung Wee, M. K. Walsh, Kwang-Yeol Yang, Sun-Hee Yim, Jon-Bang Eun, Woojin Jun, Jang-Hyun Park, Young-Min Kim, Songhee Han, Thi Thanh Hanh Nguyen, Nahyun M. Kim

Nutrition, Dietetics, and Food Sciences Faculty Publications

Chlorogenic acid, a major polyphenol in edible plants, possesses strong antioxidant activity, anti-lipid peroxidation and anticancer effects. It used for industrial applications; however, this is limited by its instability to heat or light. In this study, we, for the first time synthesized chlorogenic acid glucoside (CHG) via transglycosylation using dextransucrase from Leuconostoc mesenteroides and sucrose. CHG was purified and its structure determined by nuclear magnetic resonance and matrix-associated laser desorption ionization–time-of-flight mass spectroscopy. The production yield of CHG was 44.0% or 141 mM, as determined by response surface methodology. CHG possessed a 65% increase in water solubility and a 2-fold …

Survey Of Hatching Spines Of Bee Larvae Including Those Of Apis Mellifera (Hymenoptera: Apoidea), Jerome G. Rozen Jr., Corey Shepard Smith, James H. Cane

All PIRU Publications

This article explores the occurrence of hatching spines among bee taxa and how these structures enable a larva on hatching to extricate itself from the egg chorion. These spines, arranged in a linear sequence along the sides of the first instar just dorsal to the spiracles, have been observed and recorded in certain groups of solitary and cleptoparasitic bee taxa. After eclosion, the first instar remains loosely covered by the egg chorion. The fact that this form of eclosion has been detected in five families (Table 1 identifies four of the families. The fifth family is the Andrenidae for which …

Modeling De Novo Granulation Of Anaerobic Sludge, Anna Doloman, Honey Varghese, Charles D. Miller, Nicholas Flann

Computer Science Faculty and Staff Publications

Background: A unique combination of mechanical, physiochemical and biological forces influences granulation during processes of anaerobic digestion. Understanding this process requires a systems biology approach due to the need to consider not just single-cell metabolic processes, but also the multicellular organization and development of the granule.

Results: In this computational experiment, we address the role that physiochemical and biological processes play in granulation and provide a literature-validated working model of anaerobic granule de novo formation. The agent-based model developed in a cDynoMiCs simulation environment successfully demonstrated a de novo granulation in a glucose fed system, with the average specific methanogenic …

Physical Disruption Of Cell-Cell Contact Induces Vegf Expression In Rpe Cells, Fahrad Farjood, Elizabeth Vargis

Biological Engineering Faculty Publications

PURPOSE: To investigate the role of RPE cell-cell contact in vascular endothelial growth factor (VEGF) protein expression in cultures of primary human RPE (hRPE) cells and a human RPE cell line (ARPE-19). METHODS: Two in vitro methods, scratching and micropatterning, were used to control the physical dissociation of RPE cell-cell junctions. Scratching was performed by scoring monolayers of RPE cells with a cell scraper. Micropatterning was achieved by using a stencil patterning method. Extracellular VEGF expression was assessed by using an enzyme-linked immunosorbent assay (ELISA) kit. Immunocytochemistry (ICC) was performed to visualize the expression and localization of VEGF and intercellular …

Students Are The Engine Of Swbec | Sustainable Waste-To-Bioproducts Engineering Center, Usu College Of Engineering

College of Engineering News

More than 10 projects for 2017 include 20 students total with 6 graduate students and 14 undergraduate students.

Chemical Tools For Delivery Of Carbon Monoxide, Lisa Berreau

Funded Research Records

No abstract provided.

Systematic Elucidation Of Factors That Influence The Strength Of Tetrel Bonds, Steve Scheiner

Chemistry and Biochemistry Faculty Publications

Quantum calculations are used to examine the properties of heterodimers formed by a series of tetrel-containing molecules with NH₃ as universal Lewis base. TH₄ was taken as a starting point, with T= C, Si, Ge, and Sn. The H atoms were replaced by various numbers of F atoms: TH₃F, TF₃H, and TF₄ so as to monitor the effects of adding electron-withdrawing substituents. Unsubstituted TH₄ molecules form the weakest tetrel bonds, only up to about 2 kcal/mol. The bond is strengthened when the H opposite NH₃ is replaced by F, rising up …